RchiOBHm_Chr2g0148401

Protein of unknown function (DUF 659)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0009746
Physical Location & Seq
Reverse (-)
66103293 .. 66106612
3320 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2079 bp
ATGAACACATTGGGCATTTTCACTAACATTTCTCGAATCACTAATATTCATGATCATGGAAGAGTTGTTGATAGTAAAAAGGGTAGATTTCAATGCAACTACTGTGATAAAGAGGTGAGCGGTATCACCCGTTTGAAGTGCCATTTAGGAGGAATAGGGCCGGAAGTAAAACCATGTTTAGAGGTTCCTGCTGAGGTGAAGGAGCTGTGGAGAAACAAGTTGCTTGAAAGTCGTGGCAAGAAAGTTAACCACTCTTCCAGCTCAAATGGTGTTAAGCGTAAGAAGCATGAGACTTCTCAAACTTCTAGTTATCAGGATGGAAGCGAAGAAGATACAGACTCAATGTCAGAAGAAAATGCAACAGATTATGTCAACAGTCCCAATGGAAATATAGGCCTTCAAAGAGGAGAAAGTAATGACATGAGAAATGTTTCGATATCAATGAACCCCCAAAAATGCATTGGTAGATTCTTTTATGAAACAGGCTTAGAATTTACTGCTGCAAATTCTCCTAGCTTCAAAAGAATGATAAATTCTGTTGCTGGTCCTGGTGTGAATTACAAGATTCCTAGCTGTGAAGAGCTTAAAGGTTGCATCTTTCAAGATGAAGTGAAGGAGATGCAAGAATATGTGAGAAAGATTAAGGAATCCTGGGCTACTACTGGATGTAGCATCTTGTTGGACAGTTGGATTGATGAAAAGGGTAGAAACCTCGTTAACTTTTTGGTCAACTGCCCTCAAGGCCCTGTTTATCTCTGTACTCATGATGTTTCATCTTCCATTGGTAATGTTGATGCCATACGTGCACTATTGGAGGGGATTATTAAGGATGTTGGGGCTGACAATGTTGTTCAGATTGTGGCAGATTCTACAACTGGCTGGGTTGGTGCTCTAGGCAAGGAGTTCAGTAAGCACAAAGGAGTGTTTTGGGCAGTGAGTGGATCTCATTGCATTGAGCTGATGCTAGAGAAGATTGGAATGAGTACCTCCACTAAGGGGATTTTGGATAAAGCGAAGACTATTACAAAATTCATTCATGGGCATGAAGAAGTTTTGAAGATTTTGAAGAAACATACTTGTGGCCGTGACCTGATTAAGCCCTCCAAGATAAGAGGAGCAATGCCCTTTATGACTTTAGATAGTATTGTATACGAAAAGCAGGAACTAAAAGACATGTTTGCCTCATCTGAGTGGAACATGTCAATCTGGGGTTCAAGAGTGGAGAGCAAGATGGTAGCAGATATAGTGGAAGATCAGTCCTTTTGGATTAGAGCTGAGATGGTCTCAAAAGCAACTATGCCGCTGGTTCGTGCTATTGAATTGATCTTTGAGGCTGACAAGCCACTTGTGGGGCACATATACGAAACCATGGATCAAGTGAAGGAGAGAATTAAAGAAGAATTAATAAACAAAAAGTCCCACTACAGGCCTTTTTGGGAAGTTATTGATGACATTTGGGACAATATTCTCCATATCCCTCTCCACGGGGCTGGTTATTATCTTAATCCAAGTCTCAAATATTCTAATGACTTCTATTGCGATGATGAGGTTTACCTTGGGCTTATGTGCTGCATTGCACAGATGGTGCGGGATCCTTCAATTCAAGATGTAATACACAATCAACTCAAGGAGTACATACGTGCTGAAGGCAGTTTCAAGGAGGGGAGTTCCTCTAGCCGAAGAATAACTCATCCAGCTATGTGGTGGTCTTCTTATGGGAAACAATGTCCTGAACTCCAGAGGTTTGCCATTAGAGTTTTGAGCCAGAACTGCGATGGTGCTACAAGATATGGACTCAGAAGGACTCTAGCTGAGAAGCTGGTTACAAATGGAAGGAATCCTATCGAGCAGCAACGGTTGAGTGATCTGACTTTTCTTCATTATAATTTGCAATTACAGAAGTTTTGCTCAGGTGTGAAGAGCGGCATTGAAGCTGAGGATATTCATCCAATGGATGACTGGATCATCGATGAAGCACAAGATATTGTTTCTCAGAATGGGGATGTGAAGGTGGAGCCTGCTAATGGAGCTACCAGTGAAGGATGTTCAAGATTGCAGCTTAAAATAGAATCCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF659 Dimer_Tnp_hAT zf-BED

Protein Analysis

692

Amino Acids

78.04

Weight (kDa)

6.21

Isoelectric Point (pI)

42.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF659 PF04937 190 - 341 7.6e-48 Domain of unknown function (DUF659)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009746)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13010 AT3G13020 AT3G13030 AT3G13030 AT3G13030 AT3G13030 AT3G13030
fragaria_vesca FvH4_6g36422
malus_domestica MD09G1169400.v1.1
pyrus_communis pycom09g08680
rosa_chinensis RchiOBHm_Chr2g0148401
rosa_laevigata RLG00000020348
rosa_roxburghii Rroxscaffold_2G00098760
rosa_rugosa Rorug02G0406800
rosa_samantha Rh2AG465500 Rh2BG478400 Rh2BG478500 Rh2CG452000 Rh2DG487200 Rh2DG487300
rosa_wichuraiana Rw2G037940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1884
AccBSI CCGCTC 2 cut(s) 120, 1923
AccI GTMKAC 1 cut(s) 1149
AciI CCGC 4 cut(s) 120, 1301, 1588, 1923
AclWI GGATC 5 cut(s) 949, 1380, 1586, 1599, 1970
AcoI YGGCCR 1 cut(s) 1081
AcsI RAATTY 4 cut(s) 491, 505, 532, 1028
AcuI CTGAAG 1 cut(s) 1665
AfaI GTAC 3 cut(s) 760, 985, 1634
AfiI CCNNNNNNNGG 5 cut(s) 996, 1349, 1425, 1484, 2024
AflIII ACRYGT 2 cut(s) 1173, 1197
AhdI GACNNNNNGTC 1 cut(s) 343
AjnI CCWGG 2 cut(s) 547, 650
Alw21I GWGCWC 2 cut(s) 808, 892
Alw26I GTCTC 3 cut(s) 284, 1288, 1517
Alw44I GTGCAC 1 cut(s) 804
AlwI GGATC 5 cut(s) 949, 1380, 1586, 1599, 1970
AoxI GGCC 5 cut(s) 158, 394, 742, 1081, 1427
ApaLI GTGCAC 1 cut(s) 804
ApeKI GCWGC 4 cut(s) 500, 1569, 1849, 2056
ApoI RAATTY 4 cut(s) 491, 505, 532, 1028
AseI ATTAAT 1 cut(s) 1403
Asp700I GAANNNNTTC 1 cut(s) 430
AspS9I GGNCC 3 cut(s) 158, 545, 743
AsuHPI GGTGA 3 cut(s) 118, 127, 208
AvaII GGWCC 1 cut(s) 545
BaeGI GKGCMC 2 cut(s) 808, 1356
BamHI GGATCC 1 cut(s) 1591
BbsI GAAGAC 2 cut(s) 1022, 1701
Bbv12I GWGCWC 2 cut(s) 808, 892
BbvCI CCTCAGC 2 cut(s) 192, 1935
BbvI GCAGC 4 cut(s) 487, 1556, 1861, 2068
BccI CCATC 5 cut(s) 311, 1225, 1273, 1576, 1769
BceAI ACGGC 1 cut(s) 1068
BciT130I CCWGG 2 cut(s) 549, 652
BclI TGATCA 1 cut(s) 52
BcoDI GTCTC 3 cut(s) 284, 1288, 1517
BfaI CTAG 7 cut(s) 306, 513, 570, 893, 965, 1674, 1808
BfmI CTRYAG 1 cut(s) 1423
BglI GCCNNNNNGGC 1 cut(s) 741
BisI GCNGC 6 cut(s) 501, 1301, 1570, 1850, 1924, 2057
BlsI GCNGC 6 cut(s) 502, 1302, 1571, 1851, 1925, 2058
Bme1390I CCNGG 2 cut(s) 549, 652
Bme18I GGWCC 1 cut(s) 545
BmeRI GACNNNNNGTC 1 cut(s) 343
BmgT120I GGNCC 3 cut(s) 158, 545, 743
BmiI GGNNCC 3 cut(s) 186, 1593, 2016
BmrFI CCNGG 2 cut(s) 549, 652
BmsI GCATC 5 cut(s) 603, 609, 681, 784, 951
BpiI GAAGAC 2 cut(s) 1022, 1701
BplI GAGNNNNNCTC 4 cut(s) 928, 960, 1268, 1300
BpmI CTGGAG 1 cut(s) 1721
Bpu10I CCTNAGC 3 cut(s) 192, 1909, 1935
BpuEI CTTGAG 2 cut(s) 723, 1610
Bsa29I ATCGAT 1 cut(s) 1968
BsaAI YACGTR 2 cut(s) 803, 1640
BsaBI GATNNNNATC 1 cut(s) 1944
BsaI GGTCTC 1 cut(s) 1288
BsaJI CCNNGG 4 cut(s) 651, 1368, 1483, 1555
Bsc4I CCNNNNNNNGG 5 cut(s) 996, 1349, 1425, 1484, 2024
Bse1I ACTGG 4 cut(s) 667, 880, 1964, 2034
Bse3DI GCAATG 3 cut(s) 946, 1125, 1572
Bse8I GATNNNNATC 1 cut(s) 1944
BseBI CCWGG 2 cut(s) 549, 652
BseCI ATCGAT 1 cut(s) 1968
BseDI CCNNGG 4 cut(s) 651, 1368, 1483, 1555
BseGI GGATG 8 cut(s) 322, 671, 835, 1690, 1945, 1960, 2008, 2048
BseJI GATNNNNATC 1 cut(s) 1944
BseLI CCNNNNNNNGG 5 cut(s) 996, 1349, 1425, 1484, 2024
BseMI GCAATG 3 cut(s) 946, 1125, 1572
BseMII CTCAG 8 cut(s) 183, 1179, 1266, 1803, 1810, 1923, 1926, 2006
BseNI ACTGG 4 cut(s) 667, 880, 1964, 2034
BseRI GAGGAG 2 cut(s) 420, 1128
BseSI GKGCMC 2 cut(s) 808, 1356
BseXI GCAGC 4 cut(s) 487, 1556, 1861, 2068
BseYI CCCAGC 1 cut(s) 879
BshFI GGCC 5 cut(s) 160, 396, 744, 1083, 1429
BshVI ATCGAT 1 cut(s) 1968
BsiHKAI GWGCWC 2 cut(s) 808, 892
BsiSI CCGG 1 cut(s) 161
BslFI GGGAC 3 cut(s) 363, 1402, 1472
BslI CCNNNNNNNGG 5 cut(s) 996, 1349, 1425, 1484, 2024
BsmAI GTCTC 3 cut(s) 284, 1288, 1517
BsmFI GGGAC 3 cut(s) 363, 1402, 1472
BsnI GGCC 5 cut(s) 160, 396, 744, 1083, 1429
Bso31I GGTCTC 1 cut(s) 1288
Bsp1286I GDGCHC 3 cut(s) 808, 892, 1356
Bsp143I GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
Bsp19I CCATGG 1 cut(s) 1368
BspACI CCGC 4 cut(s) 120, 1301, 1588, 1923
BspANI GGCC 5 cut(s) 160, 396, 744, 1083, 1429
BspCNI CTCAG 8 cut(s) 184, 1180, 1267, 1804, 1809, 1922, 1927, 2005
BspDI ATCGAT 1 cut(s) 1968
BspHI TCATGA 2 cut(s) 49, 763
BspLI GGNNCC 3 cut(s) 186, 1593, 2016
BspPI GGATC 5 cut(s) 949, 1380, 1586, 1599, 1970
BspQI GCTCTTC 2 cut(s) 573, 1913
BspTNI GGTCTC 1 cut(s) 1288
BsrBI CCGCTC 2 cut(s) 120, 1923
BsrDI GCAATG 3 cut(s) 946, 1125, 1572
BsrI ACTGG 4 cut(s) 667, 880, 1964, 2034
BssECI CCNNGG 4 cut(s) 651, 1368, 1483, 1555
BssMI GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
BssNAI GTATAC 1 cut(s) 1150
BssT1I CCWWGG 2 cut(s) 1368, 1555
Bst1107I GTATAC 1 cut(s) 1150
Bst2UI CCWGG 2 cut(s) 549, 652
Bst4CI ACNGT 4 cut(s) 104, 377, 686, 1857
Bst6I CTCTTC 4 cut(s) 55, 259, 573, 1913
BstBAI YACGTR 2 cut(s) 803, 1640
BstC8I GCNNGC 1 cut(s) 2019
BstDSI CCRYGG 2 cut(s) 1368, 1483
BstF5I GGATG 8 cut(s) 322, 671, 835, 1690, 1945, 1960, 2008, 2048
BstKTI GATC 8 cut(s) 55, 944, 1255, 1326, 1375, 1594, 1867, 1965
BstMAI GTCTC 3 cut(s) 284, 1288, 1517
BstMBI GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
BstMWI GCNNNNNNNGC 5 cut(s) 283, 741, 803, 1770, 2027
BstNI CCWGG 2 cut(s) 549, 652
BstNSI RCATGY 2 cut(s) 1177, 1201
BstSCI CCNGG 2 cut(s) 547, 650
BstSFI CTRYAG 1 cut(s) 1423
BstSLI GKGCMC 2 cut(s) 808, 1356
BstV1I GCAGC 4 cut(s) 487, 1556, 1861, 2068
BstV2I GAAGAC 2 cut(s) 1022, 1701
BstX2I RGATCY 2 cut(s) 941, 1591
BstXI CCANNNNNNTGG 2 cut(s) 1490, 1701
BstYI RGATCY 2 cut(s) 941, 1591
BstZ17I GTATAC 1 cut(s) 1150
Bsu15I ATCGAT 1 cut(s) 1968
BsuRI GGCC 5 cut(s) 160, 396, 744, 1083, 1429
BsuTUI ATCGAT 1 cut(s) 1968
BtgI CCRYGG 2 cut(s) 1368, 1483
BtgZI GCGATG 2 cut(s) 1554, 1788
BtsCI GGATG 8 cut(s) 322, 671, 835, 1690, 1945, 1960, 2008, 2048
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 2 cut(s) 939, 2041
Cac8I GCNNGC 1 cut(s) 2019
CciI TCATGA 2 cut(s) 49, 763
Cfr13I GGNCC 3 cut(s) 158, 545, 743
ClaI ATCGAT 1 cut(s) 1968
Csp6I GTAC 3 cut(s) 759, 984, 1633
CviQI GTAC 3 cut(s) 759, 984, 1633
DpnI GATC 8 cut(s) 54, 943, 1254, 1325, 1374, 1593, 1866, 1964
DpnII GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
DriI GACNNNNNGTC 1 cut(s) 343
EaeI YGGCCR 1 cut(s) 1081
Eam1104I CTCTTC 4 cut(s) 55, 259, 573, 1913
Eam1105I GACNNNNNGTC 1 cut(s) 343
EarI CTCTTC 4 cut(s) 55, 259, 573, 1913
Eco130I CCWWGG 2 cut(s) 1368, 1555
Eco147I AGGCCT 2 cut(s) 396, 1429
Eco31I GGTCTC 1 cut(s) 1288
Eco32I GATATC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 545
Eco57I CTGAAG 1 cut(s) 1665
EcoO109I RGGNCCY 1 cut(s) 743
EcoRII CCWGG 2 cut(s) 547, 650
EcoRV GATATC 1 cut(s) 438
EcoT14I CCWWGG 2 cut(s) 1368, 1555
EcoT22I ATGCAT 1 cut(s) 461
ErhI CCWWGG 2 cut(s) 1368, 1555
FaqI GGGAC 3 cut(s) 363, 1402, 1472
FauI CCCGC 1 cut(s) 1581
FbaI TGATCA 1 cut(s) 52
FblI GTMKAC 1 cut(s) 1149
Fnu4HI GCNGC 6 cut(s) 501, 1301, 1570, 1850, 1924, 2057
FokI GGATG 8 cut(s) 329, 678, 842, 1677, 1932, 1967, 2015, 2055
Fsp4HI GCNGC 6 cut(s) 501, 1301, 1570, 1850, 1924, 2057
FspBI CTAG 7 cut(s) 306, 513, 570, 893, 965, 1674, 1808
GluI GCNGC 6 cut(s) 501, 1301, 1570, 1850, 1924, 2057
GsaI CCCAGC 1 cut(s) 883
GsuI CTGGAG 1 cut(s) 1721
HaeIII GGCC 5 cut(s) 160, 396, 744, 1083, 1429
HapII CCGG 1 cut(s) 161
HincII GTYRAC 4 cut(s) 247, 373, 718, 730
HindII GTYRAC 4 cut(s) 247, 373, 718, 730
HpaI GTTAAC 2 cut(s) 247, 718
HpaII CCGG 1 cut(s) 161
HphI GGTGA 3 cut(s) 118, 127, 208
Hpy166II GTNNAC 7 cut(s) 247, 373, 718, 730, 806, 1150, 1552
Hpy188I TCNGA 6 cut(s) 349, 855, 1189, 1799, 1869, 1995
Hpy8I GTNNAC 7 cut(s) 247, 373, 718, 730, 806, 1150, 1552
HpyCH4III ACNGT 4 cut(s) 104, 377, 686, 1857
HpyCH4IV ACGT 2 cut(s) 802, 1639
HpyF10VI GCNNNNNNNGC 5 cut(s) 283, 741, 803, 1770, 2027
HpySE526I ACGT 2 cut(s) 802, 1639
Ksp22I TGATCA 1 cut(s) 52
KspAI GTTAAC 2 cut(s) 247, 718
Kzo9I GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
LguI GCTCTTC 2 cut(s) 573, 1913
LmnI GCTCC 4 cut(s) 202, 1115, 2014, 2027
Lsp1109I GCAGC 4 cut(s) 487, 1556, 1861, 2068
LweI GCATC 5 cut(s) 603, 609, 681, 784, 951
MaeI CTAG 7 cut(s) 306, 513, 570, 893, 965, 1674, 1808
MaeII ACGT 2 cut(s) 802, 1639
MaeIII GTNAC 2 cut(s) 1085, 1822
MalI GATC 8 cut(s) 54, 943, 1254, 1325, 1374, 1593, 1866, 1964
MbiI CCGCTC 2 cut(s) 120, 1923
MboI GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
MflI RGATCY 2 cut(s) 941, 1591
MhlI GDGCHC 3 cut(s) 808, 892, 1356
MlyI GAGTC 3 cut(s) 332, 1788, 1798
MmeI TCCRAC 2 cut(s) 660, 668
Mph1103I ATGCAT 1 cut(s) 461
MroXI GAANNNNTTC 1 cut(s) 430
MslI CAYNNNNRTG 4 cut(s) 54, 1041, 1077, 1189
MspA1I CMGCKG 1 cut(s) 1303
MspI CCGG 1 cut(s) 161
MspR9I CCNGG 2 cut(s) 549, 652
MvaI CCWGG 2 cut(s) 549, 652
MwoI GCNNNNNNNGC 5 cut(s) 283, 741, 803, 1770, 2027
NcoI CCATGG 1 cut(s) 1368
NdeII GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
NlaIV GGNNCC 3 cut(s) 186, 1593, 2016
NmuCI GTSAC 1 cut(s) 1085
NsiI ATGCAT 1 cut(s) 461
NspI RCATGY 2 cut(s) 1177, 1201
PagI TCATGA 2 cut(s) 49, 763
PceI AGGCCT 2 cut(s) 396, 1429
PciI ACATGT 2 cut(s) 1173, 1197
PciSI GCTCTTC 2 cut(s) 573, 1913
PdmI GAANNNNTTC 1 cut(s) 430
PfeI GAWTC 7 cut(s) 36, 468, 565, 647, 866, 1837, 2069
PkrI GCNGC 6 cut(s) 502, 1302, 1571, 1851, 1925, 2058
PleI GAGTC 3 cut(s) 332, 1788, 1798
PpsI GAGTC 3 cut(s) 332, 1788, 1798
Ppu21I YACGTR 2 cut(s) 803, 1640
PscI ACATGT 2 cut(s) 1173, 1197
PshBI ATTAAT 1 cut(s) 1403
PsiI TTATAA 1 cut(s) 1884
Psp6I CCWGG 2 cut(s) 547, 650
PspFI CCCAGC 1 cut(s) 879
PspGI CCWGG 2 cut(s) 547, 650
PspN4I GGNNCC 3 cut(s) 186, 1593, 2016
PspPI GGNCC 3 cut(s) 158, 545, 743
PsuI RGATCY 2 cut(s) 941, 1591
RsaI GTAC 3 cut(s) 760, 985, 1634
RsaNI GTAC 3 cut(s) 759, 984, 1633
RseI CAYNNNNRTG 4 cut(s) 54, 1041, 1077, 1189
SapI GCTCTTC 2 cut(s) 573, 1913
SatI GCNGC 6 cut(s) 501, 1301, 1570, 1850, 1924, 2057
Sau3AI GATC 8 cut(s) 52, 941, 1252, 1323, 1372, 1591, 1864, 1962
Sau96I GGNCC 3 cut(s) 158, 545, 743
SchI GAGTC 3 cut(s) 332, 1788, 1798
ScrFI CCNGG 2 cut(s) 549, 652
SduI GDGCHC 3 cut(s) 808, 892, 1356
SfaNI GCATC 5 cut(s) 603, 609, 681, 784, 951
SfcI CTRYAG 1 cut(s) 1423
SinI GGWCC 1 cut(s) 545
SmiMI CAYNNNNRTG 4 cut(s) 54, 1041, 1077, 1189
SmlI CTYRAG 2 cut(s) 738, 1625
SmoI CTYRAG 2 cut(s) 738, 1625
SseBI AGGCCT 2 cut(s) 396, 1429
SsiI CCGC 4 cut(s) 120, 1301, 1588, 1923
SspI AATATT 3 cut(s) 46, 1465, 1520
SspMI CTAG 7 cut(s) 306, 513, 570, 893, 965, 1674, 1808
StuI AGGCCT 2 cut(s) 396, 1429
StyD4I CCNGG 2 cut(s) 547, 650
StyI CCWWGG 2 cut(s) 1368, 1555
TaaI ACNGT 4 cut(s) 104, 377, 686, 1857
TaiI ACGT 2 cut(s) 805, 1642
TaqI TCGA 4 cut(s) 34, 434, 1845, 1968
TatI WGTACW 2 cut(s) 758, 1632
TauI GCSGC 2 cut(s) 1303, 1926
TfiI GAWTC 7 cut(s) 36, 468, 565, 647, 866, 1837, 2069
TscAI CASTG 2 cut(s) 939, 2041
TseFI GTSAC 1 cut(s) 1085
TseI GCWGC 4 cut(s) 500, 1569, 1849, 2056
Tsp45I GTSAC 1 cut(s) 1085
TspRI CASTG 2 cut(s) 939, 2041
VneI GTGCAC 1 cut(s) 804
VpaK11BI GGWCC 1 cut(s) 545
VspI ATTAAT 1 cut(s) 1403
XapI RAATTY 4 cut(s) 491, 505, 532, 1028
XceI RCATGY 2 cut(s) 1177, 1201
XcmI CCANNNNNNNNNTGG 4 cut(s) 458, 1701, 1772, 1956
XmiI GTMKAC 1 cut(s) 1149
XmnI GAANNNNTTC 1 cut(s) 430
XspI CTAG 7 cut(s) 306, 513, 570, 893, 965, 1674, 1808
Zsp2I ATGCAT 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.