Protein of unknown function (DUF4005)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13460 |
| fragaria_vesca | FvH4_7g02140 FvH4_7g02140 |
| malus_domestica | MD02G1297300.v1.1 |
| prunus_persica | Prupe.2G026800_v2.0.a1 Prupe.2G026800_v2.0.a1 Prupe.2G026800_v2.0.a1 Prupe.2G026800_v2.0.a1 Prupe.2G026800_v2.0.a1 Prupe.2G026800_v2.0.a1 |
| pyrus_communis | pycom02g25050 |
| rosa_chinensis | RchiOBHm_Chr1g0319351 |
| rosa_laevigata | RLG00000030493 |
| rosa_roxburghii | Rroxscaffold_4G00328550 |
| rosa_rugosa | Rorug01G0027000 Rorug01G0027100 |
| rosa_samantha | Rh1AG039200 Rh1BG036100 Rh1CG038100 Rh1DG031800 |
| rosa_wichuraiana | Rw1G003130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 573 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 945 |
| Acc36I | ACCTGC | 1 cut(s) | 939 |
| AccII | CGCG | 1 cut(s) | 393 |
| AciI | CCGC | 4 cut(s) | 384, 391, 393, 1068 |
| AclWI | GGATC | 1 cut(s) | 1320 |
| AcoI | YGGCCR | 1 cut(s) | 1065 |
| AcsI | RAATTY | 4 cut(s) | 375, 604, 834, 1027 |
| AfaI | GTAC | 1 cut(s) | 1363 |
| AflII | CTTAAG | 2 cut(s) | 107, 719 |
| AgsI | TTSAA | 4 cut(s) | 380, 672, 857, 1090 |
| AjnI | CCWGG | 1 cut(s) | 539 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 438, 470 |
| AleI | CACNNNNGTG | 2 cut(s) | 496, 534 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 994, 1026 |
| Alw21I | GWGCWC | 2 cut(s) | 236, 1337 |
| Alw26I | GTCTC | 1 cut(s) | 466 |
| AlwI | GGATC | 1 cut(s) | 1320 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 251 |
| AoxI | GGCC | 5 cut(s) | 318, 687, 1065, 1121, 1273 |
| ApeKI | GCWGC | 8 cut(s) | 239, 242, 251, 260, 263, 272, 275, 365 |
| ApoI | RAATTY | 4 cut(s) | 375, 604, 834, 1027 |
| AseI | ATTAAT | 2 cut(s) | 957, 1323 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 970 |
| AspS9I | GGNCC | 2 cut(s) | 814, 1273 |
| AsuHPI | GGTGA | 2 cut(s) | 150, 1149 |
| AsuII | TTCGAA | 1 cut(s) | 881 |
| AvaII | GGWCC | 1 cut(s) | 814 |
| BaeGI | GKGCMC | 1 cut(s) | 424 |
| BbsI | GAAGAC | 1 cut(s) | 864 |
| Bbv12I | GWGCWC | 2 cut(s) | 236, 1337 |
| BbvCI | CCTCAGC | 1 cut(s) | 279 |
| BbvI | GCAGC | 8 cut(s) | 226, 229, 238, 250, 259, 262, 272, 352 |
| BccI | CCATC | 5 cut(s) | 84, 163, 622, 792, 1202 |
| BciT130I | CCWGG | 1 cut(s) | 541 |
| BciVI | GTATCC | 2 cut(s) | 1129, 1256 |
| BclI | TGATCA | 1 cut(s) | 592 |
| BcoDI | GTCTC | 1 cut(s) | 466 |
| BfaI | CTAG | 1 cut(s) | 1296 |
| BfmI | CTRYAG | 1 cut(s) | 243 |
| BfrI | CTTAAG | 2 cut(s) | 107, 719 |
| BfuAI | ACCTGC | 1 cut(s) | 939 |
| BfuI | GTATCC | 2 cut(s) | 1129, 1256 |
| BglII | AGATCT | 1 cut(s) | 1040 |
| BisI | GCNGC | 9 cut(s) | 240, 243, 252, 261, 264, 273, 276, 366, 1068 |
| BlsI | GCNGC | 9 cut(s) | 241, 244, 253, 262, 265, 274, 277, 367, 1069 |
| BmcAI | AGTACT | 1 cut(s) | 1363 |
| Bme1390I | CCNGG | 1 cut(s) | 541 |
| Bme18I | GGWCC | 1 cut(s) | 814 |
| BmgT120I | GGNCC | 2 cut(s) | 814, 1273 |
| BmrFI | CCNGG | 1 cut(s) | 541 |
| BpiI | GAAGAC | 1 cut(s) | 864 |
| Bpu10I | CCTNAGC | 1 cut(s) | 279 |
| Bpu14I | TTCGAA | 1 cut(s) | 881 |
| BpuEI | CTTGAG | 1 cut(s) | 479 |
| BsaAI | YACGTR | 1 cut(s) | 532 |
| BsaJI | CCNNGG | 2 cut(s) | 391, 1124 |
| BsaWI | WCCGGW | 1 cut(s) | 1238 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1027, 1057 |
| Bse1I | ACTGG | 3 cut(s) | 301, 812, 1286 |
| Bse3DI | GCAATG | 1 cut(s) | 489 |
| BseBI | CCWGG | 1 cut(s) | 541 |
| BseDI | CCNNGG | 2 cut(s) | 391, 1124 |
| BseGI | GGATG | 4 cut(s) | 519, 633, 661, 986 |
| BseMI | GCAATG | 1 cut(s) | 489 |
| BseMII | CTCAG | 2 cut(s) | 270, 1137 |
| BseNI | ACTGG | 3 cut(s) | 301, 812, 1286 |
| BseRI | GAGGAG | 1 cut(s) | 908 |
| BseSI | GKGCMC | 1 cut(s) | 424 |
| BseXI | GCAGC | 8 cut(s) | 226, 229, 238, 250, 259, 262, 272, 352 |
| Bsh1236I | CGCG | 1 cut(s) | 393 |
| BshFI | GGCC | 5 cut(s) | 320, 689, 1067, 1123, 1275 |
| BsiHKAI | GWGCWC | 2 cut(s) | 236, 1337 |
| BsiSI | CCGG | 1 cut(s) | 1239 |
| BslFI | GGGAC | 1 cut(s) | 626 |
| BsmAI | GTCTC | 1 cut(s) | 466 |
| BsmBI | CGTCTC | 1 cut(s) | 466 |
| BsmFI | GGGAC | 1 cut(s) | 626 |
| BsnI | GGCC | 5 cut(s) | 320, 689, 1067, 1123, 1275 |
| Bsp119I | TTCGAA | 1 cut(s) | 881 |
| Bsp1286I | GDGCHC | 3 cut(s) | 236, 424, 1337 |
| Bsp143I | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| Bsp19I | CCATGG | 1 cut(s) | 1124 |
| BspACI | CCGC | 4 cut(s) | 384, 391, 393, 1068 |
| BspANI | GGCC | 5 cut(s) | 320, 689, 1067, 1123, 1275 |
| BspCNI | CTCAG | 2 cut(s) | 271, 1138 |
| BspFNI | CGCG | 1 cut(s) | 393 |
| BspMAI | CTGCAG | 1 cut(s) | 247 |
| BspMI | ACCTGC | 1 cut(s) | 939 |
| BspPI | GGATC | 1 cut(s) | 1320 |
| BspQI | GCTCTTC | 1 cut(s) | 5 |
| BspT104I | TTCGAA | 1 cut(s) | 881 |
| BspTI | CTTAAG | 2 cut(s) | 107, 719 |
| BsrDI | GCAATG | 1 cut(s) | 489 |
| BsrI | ACTGG | 3 cut(s) | 301, 812, 1286 |
| BssECI | CCNNGG | 2 cut(s) | 391, 1124 |
| BssMI | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| BssT1I | CCWWGG | 1 cut(s) | 1124 |
| Bst2UI | CCWGG | 1 cut(s) | 541 |
| Bst4CI | ACNGT | 3 cut(s) | 469, 871, 1202 |
| Bst6I | CTCTTC | 3 cut(s) | 5, 74, 672 |
| BstAFI | CTTAAG | 2 cut(s) | 107, 719 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstBAI | YACGTR | 1 cut(s) | 532 |
| BstBI | TTCGAA | 1 cut(s) | 881 |
| BstC8I | GCNNGC | 4 cut(s) | 206, 210, 232, 503 |
| BstDEI | CTNAG | 5 cut(s) | 279, 425, 923, 1146, 1214 |
| BstDSI | CCRYGG | 2 cut(s) | 391, 1124 |
| BstEII | GGTNACC | 2 cut(s) | 120, 395 |
| BstF5I | GGATG | 4 cut(s) | 519, 633, 661, 986 |
| BstFNI | CGCG | 1 cut(s) | 393 |
| BstKTI | GATC | 4 cut(s) | 595, 1043, 1259, 1315 |
| BstMAI | GTCTC | 1 cut(s) | 466 |
| BstMBI | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| BstNI | CCWGG | 1 cut(s) | 541 |
| BstNSI | RCATGY | 1 cut(s) | 212 |
| BstPI | GGTNACC | 2 cut(s) | 120, 395 |
| BstSCI | CCNGG | 1 cut(s) | 539 |
| BstSFI | CTRYAG | 1 cut(s) | 243 |
| BstSLI | GKGCMC | 1 cut(s) | 424 |
| BstUI | CGCG | 1 cut(s) | 393 |
| BstV1I | GCAGC | 8 cut(s) | 226, 229, 238, 250, 259, 262, 272, 352 |
| BstV2I | GAAGAC | 1 cut(s) | 864 |
| BstX2I | RGATCY | 1 cut(s) | 1040 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 328 |
| BstYI | RGATCY | 1 cut(s) | 1040 |
| BsuI | GTATCC | 2 cut(s) | 1129, 1256 |
| BsuRI | GGCC | 5 cut(s) | 320, 689, 1067, 1123, 1275 |
| BtgI | CCRYGG | 2 cut(s) | 391, 1124 |
| BtsCI | GGATG | 4 cut(s) | 519, 633, 661, 986 |
| BtsI | GCAGTG | 2 cut(s) | 234, 1013 |
| BtsIMutI | CAGTG | 5 cut(s) | 234, 294, 321, 1013, 1207 |
| BveI | ACCTGC | 1 cut(s) | 939 |
| Cac8I | GCNNGC | 4 cut(s) | 206, 210, 232, 503 |
| CaiI | CAGNNNCTG | 1 cut(s) | 251 |
| Cfr13I | GGNCC | 2 cut(s) | 814, 1273 |
| Cfr42I | CCGCGG | 1 cut(s) | 394 |
| Csp6I | GTAC | 1 cut(s) | 1362 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 632, 667, 1222, 1257 |
| CviAII | CATG | 6 cut(s) | 209, 269, 1063, 1125, 1161, 1267 |
| CviQI | GTAC | 1 cut(s) | 1362 |
| DdeI | CTNAG | 5 cut(s) | 279, 425, 923, 1146, 1214 |
| DpnI | GATC | 4 cut(s) | 594, 1042, 1258, 1314 |
| DpnII | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 945 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 945 |
| EaeI | YGGCCR | 1 cut(s) | 1065 |
| Eam1104I | CTCTTC | 3 cut(s) | 5, 74, 672 |
| EarI | CTCTTC | 3 cut(s) | 5, 74, 672 |
| Eco130I | CCWWGG | 1 cut(s) | 1124 |
| Eco147I | AGGCCT | 1 cut(s) | 689 |
| Eco47I | GGWCC | 1 cut(s) | 814 |
| Eco91I | GGTNACC | 2 cut(s) | 120, 395 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1273 |
| EcoO65I | GGTNACC | 2 cut(s) | 120, 395 |
| EcoRII | CCWGG | 1 cut(s) | 539 |
| EcoT14I | CCWWGG | 1 cut(s) | 1124 |
| ErhI | CCWWGG | 1 cut(s) | 1124 |
| Esp3I | CGTCTC | 1 cut(s) | 466 |
| FaeI | CATG | 6 cut(s) | 212, 272, 1066, 1128, 1164, 1270 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 397, 429, 906, 938, 974, 1006 |
| FaqI | GGGAC | 1 cut(s) | 626 |
| FatI | CATG | 6 cut(s) | 208, 268, 1062, 1124, 1160, 1266 |
| FbaI | TGATCA | 1 cut(s) | 592 |
| Fnu4HI | GCNGC | 9 cut(s) | 240, 243, 252, 261, 264, 273, 276, 366, 1068 |
| FokI | GGATG | 4 cut(s) | 506, 640, 668, 973 |
| Fsp4HI | GCNGC | 9 cut(s) | 240, 243, 252, 261, 264, 273, 276, 366, 1068 |
| FspBI | CTAG | 1 cut(s) | 1296 |
| GluI | GCNGC | 9 cut(s) | 240, 243, 252, 261, 264, 273, 276, 366, 1068 |
| HaeIII | GGCC | 5 cut(s) | 320, 689, 1067, 1123, 1275 |
| HapII | CCGG | 1 cut(s) | 1239 |
| Hin1II | CATG | 6 cut(s) | 212, 272, 1066, 1128, 1164, 1270 |
| HindIII | AAGCTT | 2 cut(s) | 34, 411 |
| HinfI | GANTC | 4 cut(s) | 546, 632, 770, 971 |
| HpaII | CCGG | 1 cut(s) | 1239 |
| HphI | GGTGA | 2 cut(s) | 150, 1149 |
| Hpy188I | TCNGA | 9 cut(s) | 49, 101, 216, 775, 954, 1147, 1263, 1330, 1370 |
| Hpy188III | TCNNGA | 1 cut(s) | 1221 |
| HpyCH4III | ACNGT | 3 cut(s) | 469, 871, 1202 |
| HpyCH4IV | ACGT | 1 cut(s) | 531 |
| HpyCH4V | TGCA | 6 cut(s) | 245, 260, 404, 505, 934, 1164 |
| HpyF3I | CTNAG | 5 cut(s) | 279, 425, 923, 1146, 1214 |
| HpySE526I | ACGT | 1 cut(s) | 531 |
| Hsp92II | CATG | 6 cut(s) | 212, 272, 1066, 1128, 1164, 1270 |
| Ksp22I | TGATCA | 1 cut(s) | 592 |
| KspI | CCGCGG | 1 cut(s) | 394 |
| Kzo9I | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| LguI | GCTCTTC | 1 cut(s) | 5 |
| LmnI | GCTCC | 2 cut(s) | 447, 1112 |
| Lsp1109I | GCAGC | 8 cut(s) | 226, 229, 238, 250, 259, 262, 272, 352 |
| MaeI | CTAG | 1 cut(s) | 1296 |
| MaeII | ACGT | 1 cut(s) | 531 |
| MaeIII | GTNAC | 2 cut(s) | 120, 395 |
| MalI | GATC | 4 cut(s) | 594, 1042, 1258, 1314 |
| MboI | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| MboII | GAAGA | 9 cut(s) | 22, 91, 96, 99, 206, 689, 807, 869, 1182 |
| MflI | RGATCY | 1 cut(s) | 1040 |
| MhlI | GDGCHC | 3 cut(s) | 236, 424, 1337 |
| MluCI | AATT | 8 cut(s) | 326, 375, 604, 834, 1027, 1085, 1115, 1324 |
| MlyI | GAGTC | 1 cut(s) | 626 |
| MmeI | TCCRAC | 1 cut(s) | 792 |
| MroXI | GAANNNNTTC | 1 cut(s) | 970 |
| MslI | CAYNNNNRTG | 3 cut(s) | 339, 496, 534 |
| MspA1I | CMGCKG | 2 cut(s) | 263, 393 |
| MspCI | CTTAAG | 2 cut(s) | 107, 719 |
| MspI | CCGG | 1 cut(s) | 1239 |
| MspR9I | CCNGG | 1 cut(s) | 541 |
| MvaI | CCWGG | 1 cut(s) | 541 |
| MvnI | CGCG | 1 cut(s) | 393 |
| NcoI | CCATGG | 1 cut(s) | 1124 |
| NdeII | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| NlaIII | CATG | 6 cut(s) | 212, 272, 1066, 1128, 1164, 1270 |
| NspI | RCATGY | 1 cut(s) | 212 |
| NspV | TTCGAA | 1 cut(s) | 881 |
| OliI | CACNNNNGTG | 2 cut(s) | 496, 534 |
| PaeI | GCATGC | 1 cut(s) | 212 |
| PceI | AGGCCT | 1 cut(s) | 689 |
| PciSI | GCTCTTC | 1 cut(s) | 5 |
| PdmI | GAANNNNTTC | 1 cut(s) | 970 |
| PfeI | GAWTC | 3 cut(s) | 546, 770, 971 |
| PkrI | GCNGC | 9 cut(s) | 241, 244, 253, 262, 265, 274, 277, 367, 1069 |
| PleI | GAGTC | 1 cut(s) | 626 |
| PpsI | GAGTC | 1 cut(s) | 626 |
| Ppu21I | YACGTR | 1 cut(s) | 532 |
| PshBI | ATTAAT | 2 cut(s) | 957, 1323 |
| PsiI | TTATAA | 1 cut(s) | 573 |
| Psp6I | CCWGG | 1 cut(s) | 539 |
| PspEI | GGTNACC | 2 cut(s) | 120, 395 |
| PspGI | CCWGG | 1 cut(s) | 539 |
| PspPI | GGNCC | 2 cut(s) | 814, 1273 |
| PstI | CTGCAG | 1 cut(s) | 247 |
| PstNI | CAGNNNCTG | 1 cut(s) | 251 |
| PsuI | RGATCY | 1 cut(s) | 1040 |
| PvuII | CAGCTG | 1 cut(s) | 263 |
| RsaI | GTAC | 1 cut(s) | 1363 |
| RsaNI | GTAC | 1 cut(s) | 1362 |
| RseI | CAYNNNNRTG | 3 cut(s) | 339, 496, 534 |
| SacII | CCGCGG | 1 cut(s) | 394 |
| SapI | GCTCTTC | 1 cut(s) | 5 |
| SatI | GCNGC | 9 cut(s) | 240, 243, 252, 261, 264, 273, 276, 366, 1068 |
| Sau3AI | GATC | 4 cut(s) | 592, 1040, 1256, 1312 |
| Sau96I | GGNCC | 2 cut(s) | 814, 1273 |
| ScaI | AGTACT | 1 cut(s) | 1363 |
| SchI | GAGTC | 1 cut(s) | 626 |
| ScrFI | CCNGG | 1 cut(s) | 541 |
| SduI | GDGCHC | 3 cut(s) | 236, 424, 1337 |
| SfcI | CTRYAG | 1 cut(s) | 243 |
| Sfr303I | CCGCGG | 1 cut(s) | 394 |
| SfuI | TTCGAA | 1 cut(s) | 881 |
| SgrBI | CCGCGG | 1 cut(s) | 394 |
| SinI | GGWCC | 1 cut(s) | 814 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 339, 496, 534 |
| SmlI | CTYRAG | 3 cut(s) | 107, 494, 719 |
| SmoI | CTYRAG | 3 cut(s) | 107, 494, 719 |
| SphI | GCATGC | 1 cut(s) | 212 |
| Sse9I | AATT | 8 cut(s) | 326, 375, 604, 834, 1027, 1085, 1115, 1324 |
| SseBI | AGGCCT | 1 cut(s) | 689 |
| SsiI | CCGC | 4 cut(s) | 384, 391, 393, 1068 |
| SspI | AATATT | 1 cut(s) | 743 |
| SspMI | CTAG | 1 cut(s) | 1296 |
| StuI | AGGCCT | 1 cut(s) | 689 |
| StyD4I | CCNGG | 1 cut(s) | 539 |
| StyI | CCWWGG | 1 cut(s) | 1124 |
| TaaI | ACNGT | 3 cut(s) | 469, 871, 1202 |
| TaiI | ACGT | 1 cut(s) | 534 |
| TaqI | TCGA | 3 cut(s) | 310, 457, 881 |
| TasI | AATT | 8 cut(s) | 326, 375, 604, 834, 1027, 1085, 1115, 1324 |
| TatI | WGTACW | 1 cut(s) | 1361 |
| TauI | GCSGC | 1 cut(s) | 1070 |
| TfiI | GAWTC | 3 cut(s) | 546, 770, 971 |
| TscAI | CASTG | 5 cut(s) | 241, 301, 328, 1013, 1207 |
| TseI | GCWGC | 8 cut(s) | 239, 242, 251, 260, 263, 272, 275, 365 |
| TspDTI | ATGAA | 6 cut(s) | 597, 975, 1002, 1038, 1283, 1322 |
| TspRI | CASTG | 5 cut(s) | 241, 301, 328, 1013, 1207 |
| Vha464I | CTTAAG | 2 cut(s) | 107, 719 |
| VpaK11BI | GGWCC | 1 cut(s) | 814 |
| VspI | ATTAAT | 2 cut(s) | 957, 1323 |
| XapI | RAATTY | 4 cut(s) | 375, 604, 834, 1027 |
| XceI | RCATGY | 1 cut(s) | 212 |
| XmnI | GAANNNNTTC | 1 cut(s) | 970 |
| XspI | CTAG | 1 cut(s) | 1296 |
| ZrmI | AGTACT | 1 cut(s) | 1363 |