RchiOBHm_Chr1g0331161

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0016381
Physical Location & Seq
Reverse (-)
20962366 .. 20968302
5937 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1791 bp
ATGGCGGTCTCGGCTTTCAAATCCTCCACCAGAAGAAGCAATCCCACCGGTGCCTCAACTTCATCATCATCGTCAGCTATTTCTAAACGGAGCACCGATATAGATACTAGTTCAACCAAGAAACCAAACCCACCAATCAGAAGATCCAGAAGTGTCAGCGCTTTCTCCAGAAGTGTCAGCACTCTCGACTCTCAAGATAATATTTTCTTGAACAAGAGAGACAACCCTCTCTTCTGGTCTACGGATTCCCCAACCGCTGTTGACCCCAAAACCCCGCTAGTCAAACCCGACAAAGATTCGAGGCCGGCAACCTCGTCCAGTGCGGCCGATACTAGAAGGGGACGGTCGGTGTCGCGGAACGCCGATGTTTTGGTCGGTCGGAGCCAGTCCAGAGTTGACTCGAGTCGGAGCCTGTCCAGAGTCGACACTGGCCGTCGCAACCGCTCCGTTTCCCGGTGTCCGGAGCCCAGGGGGCGTTCCGTCATTTCCAAGAGTGAAGATGAACAAGAATGTACTTCTACATTGAATAAAGGGGACGAAGGCAAAAAGGGCGGGTTAGTTAGAACTAGCTCTGATGAGTTGGATCAGTTGAAAGGCTTAAGGACGTGGTCCAGTCAGCATTCGCCTTTCCAGCCTTCACATGCAAACTTGTCCAGCTTGCAATCTTCGAATTGGGAAGACGGAGTTTCCACAGCAAGTTCCTTATCTGGAGCCGAAGATAAAACTTTTAAAGCAGCTTGTGAACAGATGAATATGAATTATGGACATTCTGGTGATGATTTGTCAGTTCAAGCAGTTCATTTGGAAAATGATACCACAAGCAGCAATATATATGAAACAGTTCGATCTGAAGTGAGACGTGCTATCTCTGAGATTCAAATTGACCTTGAAAGTGCTATGCGAAGGGGCAATACTCCGGCACTGGCAACTTCTGACGTTTCTGATATCCCTCCTGACCTGGTAAATCCAAGTGCAGTTGAATTAGTTTTGGACATCAGAAGAGAATATGCCAAAAAACTTGAGCAGTCCAAGGAACGGGCTAGCAAACTTCAATCAGATCTGGCTGTTGAGGAGCACCGTGGACAAGAGCTCAGCAGAATCCTGAAGGAAGTACTTCCAGATCCCAAGATATCTAATGCGCCAAAATCTCGTCCTGGAAGAAAAGCTAGCATTGAAAGAAGAAAGATGTCAAAACGTCTAACAGAAGAAGCTCTGGCCTATTTTGATGAGTGTGTATCCCTGTCAACTTTTGATAGTTCTGACTTTTCATCGCCAGAGGATCCACCTTTCAACTTAGTTGGTATTAATACCCCTGTTGATAAAAGTCTATCTTTACTCCAAGAAAGTTCAAGTGCTTCAGTCATGAATAGCTCAAACCGTAGACTCAATGAAAAACAGGCATTGAGCATCCAAAGTCAATTTACCAATGCCCAAAATCCCTCAGGACTAATGGTCAGCAGTGGTCCTGCAGAGCCAACCTTGAATCAGATTAGTCCTAACAGTGCCAACAGAGCCAAAGAGTGGAAATTCTCATTTGCTCATAAGCCAGCTGAAACCCTTGAGCTTCAACAAGACATTAGGAAGTACATCAGACATTTTGAGAAAGATGACATGGAATTGCAGAGTGCAAGATCCATCTCTTGTGATTTGGGTGAGTATCGCTTGCAGGCTGCAGCACAAAGTTATAAGTTTGACAGGGTTTTATTTGGAAATAGAATAGAGTCGAGGGGTATTTTACTCTGTGGCGGTGGTATTTCAAGTTCATTTTCTCCATTTGCTTCTTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

596

Amino Acids

65.51

Weight (kDa)

8.94

Isoelectric Point (pI)

73.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1686
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1521
AccBSI CCGCTC 1 cut(s) 444
AccI GTMKAC 3 cut(s) 239, 423, 1381
AccII CGCG 1 cut(s) 355
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 8 cut(s) 5, 255, 275, 323, 355, 442, 552, 1746
AclWI GGATC 6 cut(s) 138, 591, 1115, 1274, 1287, 1626
AcoI YGGCCR 2 cut(s) 324, 430
AcsI RAATTY 1 cut(s) 1526
AcuI CTGAAG 3 cut(s) 870, 1124, 1341
AfaI GTAC 3 cut(s) 514, 1113, 1586
AfeI AGCGCT 1 cut(s) 160
AfiI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
AflII CTTAAG 1 cut(s) 598
AgeI ACCGGT 1 cut(s) 47
AhdI GACNNNNNGTC 1 cut(s) 1451
AhlI ACTAGT 1 cut(s) 107
AjiI CACGTC 2 cut(s) 606, 860
AjnI CCWGG 3 cut(s) 467, 957, 1153
Alw21I GWGCWC 3 cut(s) 95, 1077, 1092
Alw26I GTCTC 3 cut(s) 13, 213, 850
AlwI GGATC 6 cut(s) 138, 591, 1115, 1274, 1287, 1626
Ama87I CYCGRG 1 cut(s) 400
Aor13HI TCCGGA 1 cut(s) 460
Aor51HI AGCGCT 1 cut(s) 160
AoxI GGCC 4 cut(s) 302, 324, 430, 1215
ApeKI GCWGC 4 cut(s) 734, 822, 1670, 1673
ApoI RAATTY 1 cut(s) 1526
AseI ATTAAT 1 cut(s) 1305
AsiGI ACCGGT 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 840, 1113
AspLEI GCGC 2 cut(s) 161, 1141
AspS9I GGNCC 2 cut(s) 609, 1463
AsuC2I CCSGG 1 cut(s) 454
AsuHPI GGTGA 2 cut(s) 785, 1664
AsuII TTCGAA 1 cut(s) 668
AsuNHI GCTAGC 2 cut(s) 1040, 1166
AvaI CYCGRG 1 cut(s) 400
AvaII GGWCC 2 cut(s) 609, 1463
AxyI CCTNAGG 1 cut(s) 1441
BamHI GGATCC 1 cut(s) 1279
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 2 cut(s) 468, 1092
BarI GAAGNNNNNNTAC 2 cut(s) 895, 927
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 3 cut(s) 95, 1077, 1092
BbvI GCAGC 4 cut(s) 746, 834, 1657, 1685
BccI CCATC 1 cut(s) 1643
BceAI ACGGC 1 cut(s) 417
BciT130I CCWGG 3 cut(s) 469, 959, 1155
BciVI GTATCC 1 cut(s) 1246
BcnI CCSGG 1 cut(s) 454
BcoDI GTCTC 3 cut(s) 13, 213, 850
BcuI ACTAGT 1 cut(s) 107
BfaI CTAG 6 cut(s) 108, 278, 333, 567, 1041, 1167
BfmI CTRYAG 2 cut(s) 1467, 1671
BfoI RGCGCY 1 cut(s) 162
BfrI CTTAAG 1 cut(s) 598
BfuI GTATCC 1 cut(s) 1246
BglI GCCNNNNNGGC 1 cut(s) 472
BglII AGATCT 1 cut(s) 1057
BisI GCNGC 5 cut(s) 324, 735, 823, 1671, 1674
BlpI GCTNAGC 1 cut(s) 1091
BlsI GCNGC 5 cut(s) 325, 736, 824, 1672, 1675
BmcAI AGTACT 1 cut(s) 1113
Bme1390I CCNGG 4 cut(s) 454, 469, 959, 1155
Bme18I GGWCC 2 cut(s) 609, 1463
BmeRI GACNNNNNGTC 1 cut(s) 1451
BmeT110I CYCGRG 1 cut(s) 400
BmgBI CACGTC 2 cut(s) 606, 860
BmgT120I GGNCC 2 cut(s) 609, 1463
BmiI GGNNCC 6 cut(s) 52, 383, 410, 465, 712, 1281
BmrFI CCNGG 4 cut(s) 454, 469, 959, 1155
BmsI GCATC 1 cut(s) 1416
BmtI GCTAGC 2 cut(s) 1044, 1170
BoxI GACNNNNGTC 1 cut(s) 402
BpiI GAAGAC 1 cut(s) 684
BpmI CTGGAG 2 cut(s) 151, 729
Bpu1102I GCTNAGC 1 cut(s) 1091
Bpu14I TTCGAA 1 cut(s) 668
BpuEI CTTGAG 3 cut(s) 177, 1040, 1580
BpuMI CCSGG 1 cut(s) 454
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 467, 468, 1029, 1078
BsaWI WCCGGW 2 cut(s) 47, 460
Bsc4I CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
Bse118I RCCGGY 2 cut(s) 47, 304
Bse1I ACTGG 5 cut(s) 318, 385, 433, 612, 927
Bse21I CCTNAGG 1 cut(s) 1441
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 3 cut(s) 469, 959, 1155
BseDI CCNNGG 4 cut(s) 467, 468, 1029, 1078
BseGI GGATG 1 cut(s) 1407
BseLI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
BseMII CTCAG 3 cut(s) 861, 1105, 1455
BseNI ACTGG 5 cut(s) 318, 385, 433, 612, 927
BseRI GAGGAG 1 cut(s) 1085
BseX3I CGGCCG 1 cut(s) 324
BseXI GCAGC 4 cut(s) 746, 834, 1657, 1685
BsgI GTGCAG 1 cut(s) 993
Bsh1236I CGCG 1 cut(s) 355
Bsh1285I CGRYCG 3 cut(s) 327, 347, 379
BshFI GGCC 4 cut(s) 304, 326, 432, 1217
BshNI GGYRCC 1 cut(s) 50
BshTI ACCGGT 1 cut(s) 47
BsiEI CGRYCG 3 cut(s) 327, 347, 379
BsiHKAI GWGCWC 3 cut(s) 95, 1077, 1092
BsiHKCI CYCGRG 1 cut(s) 400
BsiSI CCGG 5 cut(s) 48, 305, 454, 461, 917
BslFI GGGAC 2 cut(s) 354, 548
BslI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
BsmAI GTCTC 3 cut(s) 13, 213, 850
BsmBI CGTCTC 1 cut(s) 850
BsmFI GGGAC 2 cut(s) 354, 548
BsmI GAATGC 1 cut(s) 619
BsnI GGCC 4 cut(s) 304, 326, 432, 1217
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 400
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 4 cut(s) 95, 468, 1077, 1092
Bsp13I TCCGGA 1 cut(s) 460
Bsp143I GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
Bsp1720I GCTNAGC 1 cut(s) 1091
BspACI CCGC 8 cut(s) 5, 255, 275, 323, 355, 442, 552, 1746
BspANI GGCC 4 cut(s) 304, 326, 432, 1217
BspCNI CTCAG 3 cut(s) 862, 1104, 1454
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 1 cut(s) 355
BspHI TCATGA 1 cut(s) 1362
BspLI GGNNCC 6 cut(s) 52, 383, 410, 465, 712, 1281
BspMAI CTGCAG 2 cut(s) 1471, 1675
BspOI GCTAGC 2 cut(s) 1044, 1170
BspPI GGATC 6 cut(s) 138, 591, 1115, 1274, 1287, 1626
BspT104I TTCGAA 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 598
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 444
BsrFI RCCGGY 2 cut(s) 47, 304
BsrI ACTGG 5 cut(s) 318, 385, 433, 612, 927
BssAI RCCGGY 2 cut(s) 47, 304
BssECI CCNNGG 4 cut(s) 467, 468, 1029, 1078
BssMI GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
BssT1I CCWWGG 1 cut(s) 1029
Bst2UI CCWGG 3 cut(s) 469, 959, 1155
Bst4CI ACNGT 5 cut(s) 345, 841, 1079, 1379, 1502
Bst6I CTCTTC 2 cut(s) 236, 994
BstAFI CTTAAG 1 cut(s) 598
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 7 cut(s) 306, 659, 1042, 1168, 1548, 1664, 1668
BstDEI CTNAG 4 cut(s) 870, 1091, 1294, 1441
BstDSI CCRYGG 1 cut(s) 1078
BstF5I GGATG 1 cut(s) 1407
BstFNI CGCG 1 cut(s) 355
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 2 cut(s) 161, 1141
BstKTI GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
BstMAI GTCTC 3 cut(s) 13, 213, 850
BstMBI GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
BstMCI CGRYCG 3 cut(s) 327, 347, 379
BstMWI GCNNNNNNNGC 5 cut(s) 11, 472, 549, 631, 1511
BstNI CCWGG 3 cut(s) 469, 959, 1155
BstNSI RCATGY 1 cut(s) 644
BstPAI GACNNNNGTC 1 cut(s) 402
BstSCI CCNGG 4 cut(s) 452, 467, 957, 1153
BstSFI CTRYAG 2 cut(s) 1467, 1671
BstUI CGCG 1 cut(s) 355
BstV1I GCAGC 4 cut(s) 746, 834, 1657, 1685
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 5 cut(s) 143, 1057, 1120, 1279, 1631
BstYI RGATCY 5 cut(s) 143, 1057, 1120, 1279, 1631
BstZI CGGCCG 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 1441
BsuI GTATCC 1 cut(s) 1246
BsuRI GGCC 4 cut(s) 304, 326, 432, 1217
BtgI CCRYGG 1 cut(s) 1078
BtgZI GCGATG 1 cut(s) 1254
BtrI CACGTC 2 cut(s) 606, 860
BtsCI GGATG 1 cut(s) 1407
BtsI GCAGTG 1 cut(s) 1465
BtsIMutI CAGTG 5 cut(s) 325, 426, 920, 1465, 1507
Cac8I GCNNGC 7 cut(s) 306, 659, 1042, 1168, 1548, 1664, 1668
CciI TCATGA 1 cut(s) 1362
CfoI GCGC 2 cut(s) 161, 1141
Cfr10I RCCGGY 2 cut(s) 47, 304
Cfr13I GGNCC 2 cut(s) 609, 1463
CsiI ACCWGGT 1 cut(s) 957
Csp6I GTAC 3 cut(s) 513, 1112, 1585
CspAI ACCGGT 1 cut(s) 47
CviAII CATG 3 cut(s) 641, 1363, 1612
CviQI GTAC 3 cut(s) 513, 1112, 1585
DdeI CTNAG 4 cut(s) 870, 1091, 1294, 1441
DpnI GATC 7 cut(s) 145, 585, 847, 1059, 1122, 1281, 1633
DpnII GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
DraI TTTAAA 1 cut(s) 730
DriI GACNNNNNGTC 1 cut(s) 1451
EaeI YGGCCR 2 cut(s) 324, 430
EagI CGGCCG 1 cut(s) 324
Eam1104I CTCTTC 2 cut(s) 236, 994
Eam1105I GACNNNNNGTC 1 cut(s) 1451
EarI CTCTTC 2 cut(s) 236, 994
Ecl136II GAGCTC 1 cut(s) 1090
EclXI CGGCCG 1 cut(s) 324
Eco130I CCWWGG 1 cut(s) 1029
Eco24I GRGCYC 2 cut(s) 468, 1092
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 946, 1131
Eco47I GGWCC 2 cut(s) 609, 1463
Eco47III AGCGCT 1 cut(s) 160
Eco52I CGGCCG 1 cut(s) 324
Eco53kI GAGCTC 1 cut(s) 1090
Eco57I CTGAAG 3 cut(s) 870, 1124, 1341
Eco81I CCTNAGG 1 cut(s) 1441
Eco88I CYCGRG 1 cut(s) 400
EcoICRI GAGCTC 1 cut(s) 1090
EcoRII CCWGG 3 cut(s) 467, 957, 1153
EcoRV GATATC 2 cut(s) 946, 1131
EcoT14I CCWWGG 1 cut(s) 1029
EcoT38I GRGCYC 2 cut(s) 468, 1092
ErhI CCWWGG 1 cut(s) 1029
Esp3I CGTCTC 1 cut(s) 850
FaeI CATG 3 cut(s) 644, 1366, 1615
FalI AAGNNNNNCTT 2 cut(s) 1315, 1347
FaqI GGGAC 2 cut(s) 354, 548
FatI CATG 3 cut(s) 640, 1362, 1611
FauI CCCGC 2 cut(s) 282, 545
FblI GTMKAC 3 cut(s) 239, 423, 1381
Fnu4HI GCNGC 5 cut(s) 324, 735, 823, 1671, 1674
FokI GGATG 1 cut(s) 1394
FriOI GRGCYC 2 cut(s) 468, 1092
Fsp4HI GCNGC 5 cut(s) 324, 735, 823, 1671, 1674
FspBI CTAG 6 cut(s) 108, 278, 333, 567, 1041, 1167
GlaI GCGC 2 cut(s) 160, 1140
GluI GCNGC 5 cut(s) 324, 735, 823, 1671, 1674
GsuI CTGGAG 2 cut(s) 151, 729
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 4 cut(s) 304, 326, 432, 1217
HapII CCGG 5 cut(s) 48, 305, 454, 461, 917
HhaI GCGC 2 cut(s) 161, 1141
Hin1II CATG 3 cut(s) 644, 1366, 1615
Hin6I GCGC 2 cut(s) 159, 1139
HinP1I GCGC 2 cut(s) 159, 1139
HincII GTYRAC 4 cut(s) 262, 397, 424, 1245
HindII GTYRAC 4 cut(s) 262, 397, 424, 1245
HpaII CCGG 5 cut(s) 48, 305, 454, 461, 917
HphI GGTGA 2 cut(s) 785, 1664
Hpy166II GTNNAC 8 cut(s) 240, 262, 397, 424, 743, 1082, 1245, 1382
Hpy8I GTNNAC 8 cut(s) 240, 262, 397, 424, 743, 1082, 1245, 1382
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 5 cut(s) 330, 533, 645, 897, 1099
HpyCH4III ACNGT 5 cut(s) 345, 841, 1079, 1379, 1502
HpyCH4IV ACGT 4 cut(s) 605, 859, 936, 1195
HpyCH4V TGCA 8 cut(s) 644, 661, 974, 1469, 1621, 1628, 1666, 1673
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 472, 549, 631, 1511
HpyF3I CTNAG 4 cut(s) 870, 1091, 1294, 1441
HpySE526I ACGT 4 cut(s) 605, 859, 936, 1195
Hsp92II CATG 3 cut(s) 644, 1366, 1615
HspAI GCGC 2 cut(s) 159, 1139
Kpn2I TCCGGA 1 cut(s) 460
KroI GCCGGC 1 cut(s) 304
KroNI GCCGGC 1 cut(s) 306
Kzo9I GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
LmnI GCTCC 7 cut(s) 90, 381, 408, 449, 463, 710, 1072
Lsp1109I GCAGC 4 cut(s) 746, 834, 1657, 1685
LweI GCATC 1 cut(s) 1416
MabI ACCWGGT 1 cut(s) 957
MaeI CTAG 6 cut(s) 108, 278, 333, 567, 1041, 1167
MaeII ACGT 4 cut(s) 605, 859, 936, 1195
MalI GATC 7 cut(s) 145, 585, 847, 1059, 1122, 1281, 1633
MbiI CCGCTC 1 cut(s) 444
MboI GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
MflI RGATCY 5 cut(s) 143, 1057, 1120, 1279, 1631
MhlI GDGCHC 4 cut(s) 95, 468, 1077, 1092
MluCI AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
MlyI GAGTC 6 cut(s) 182, 392, 412, 429, 1377, 1730
MmeI TCCRAC 3 cut(s) 359, 386, 561
MroI TCCGGA 1 cut(s) 460
MroNI GCCGGC 1 cut(s) 304
MroXI GAANNNNTTC 2 cut(s) 840, 1113
MseI TTAA 3 cut(s) 599, 729, 1305
MslI CAYNNNNRTG 1 cut(s) 771
MspA1I CMGCKG 2 cut(s) 257, 1550
MspCI CTTAAG 1 cut(s) 598
MspI CCGG 5 cut(s) 48, 305, 454, 461, 917
MspR9I CCNGG 4 cut(s) 454, 469, 959, 1155
Mva1269I GAATGC 1 cut(s) 619
MvaI CCWGG 3 cut(s) 469, 959, 1155
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 5 cut(s) 11, 472, 549, 631, 1511
NaeI GCCGGC 1 cut(s) 306
NciI CCSGG 1 cut(s) 454
NdeII GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
NgoMIV GCCGGC 1 cut(s) 304
NheI GCTAGC 2 cut(s) 1040, 1166
NlaIII CATG 3 cut(s) 644, 1366, 1615
NlaIV GGNNCC 6 cut(s) 52, 383, 410, 465, 712, 1281
NspI RCATGY 1 cut(s) 644
NspV TTCGAA 1 cut(s) 668
PaeR7I CTCGAG 1 cut(s) 400
PagI TCATGA 1 cut(s) 1362
PasI CCCWGGG 1 cut(s) 468
PctI GAATGC 1 cut(s) 619
PdiI GCCGGC 1 cut(s) 306
PdmI GAANNNNTTC 2 cut(s) 840, 1113
PfeI GAWTC 5 cut(s) 245, 296, 874, 1098, 1483
PflFI GACNNNGTC 1 cut(s) 607
PflMI CCANNNNNTGG 1 cut(s) 1521
PfoI TCCNGGA 1 cut(s) 1153
PinAI ACCGGT 1 cut(s) 47
PkrI GCNGC 5 cut(s) 325, 736, 824, 1672, 1675
PleI GAGTC 6 cut(s) 182, 392, 411, 428, 1377, 1729
PpsI GAGTC 6 cut(s) 182, 392, 411, 428, 1377, 1729
PshAI GACNNNNGTC 1 cut(s) 402
PshBI ATTAAT 1 cut(s) 1305
PsiI TTATAA 1 cut(s) 1686
Psp124BI GAGCTC 1 cut(s) 1092
Psp6I CCWGG 3 cut(s) 467, 957, 1153
PspGI CCWGG 3 cut(s) 467, 957, 1153
PspN4I GGNNCC 6 cut(s) 52, 383, 410, 465, 712, 1281
PspPI GGNCC 2 cut(s) 609, 1463
PspXI VCTCGAGB 1 cut(s) 400
PsrI GAACNNNNNNTAC 2 cut(s) 1744, 1776
PstI CTGCAG 2 cut(s) 1471, 1675
PsuI RGATCY 5 cut(s) 143, 1057, 1120, 1279, 1631
PsyI GACNNNGTC 1 cut(s) 607
PvuII CAGCTG 1 cut(s) 1550
RsaI GTAC 3 cut(s) 514, 1113, 1586
RsaNI GTAC 3 cut(s) 513, 1112, 1585
RseI CAYNNNNRTG 1 cut(s) 771
SacI GAGCTC 1 cut(s) 1092
SalI GTCGAC 1 cut(s) 422
SaqAI TTAA 3 cut(s) 599, 729, 1305
SatI GCNGC 5 cut(s) 324, 735, 823, 1671, 1674
Sau3AI GATC 7 cut(s) 143, 583, 845, 1057, 1120, 1279, 1631
Sau96I GGNCC 2 cut(s) 609, 1463
ScaI AGTACT 1 cut(s) 1113
SchI GAGTC 6 cut(s) 182, 392, 412, 429, 1377, 1730
ScrFI CCNGG 4 cut(s) 454, 469, 959, 1155
SduI GDGCHC 4 cut(s) 95, 468, 1077, 1092
SexAI ACCWGGT 1 cut(s) 957
SfaNI GCATC 1 cut(s) 1416
SfcI CTRYAG 2 cut(s) 1467, 1671
Sfr274I CTCGAG 1 cut(s) 400
SfuI TTCGAA 1 cut(s) 668
SgrAI CRCCGGYG 1 cut(s) 47
SinI GGWCC 2 cut(s) 609, 1463
SlaI CTCGAG 1 cut(s) 400
SmiMI CAYNNNNRTG 1 cut(s) 771
SmlI CTYRAG 5 cut(s) 192, 400, 598, 1019, 1559
SmoI CTYRAG 5 cut(s) 192, 400, 598, 1019, 1559
SpeI ACTAGT 1 cut(s) 107
Sse9I AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
SsiI CCGC 8 cut(s) 5, 255, 275, 323, 355, 442, 552, 1746
SspI AATATT 1 cut(s) 202
SspMI CTAG 6 cut(s) 108, 278, 333, 567, 1041, 1167
SstI GAGCTC 1 cut(s) 1092
StyD4I CCNGG 4 cut(s) 452, 467, 957, 1153
StyI CCWWGG 1 cut(s) 1029
TaaI ACNGT 5 cut(s) 345, 841, 1079, 1379, 1502
TaiI ACGT 4 cut(s) 608, 862, 939, 1198
TaqI TCGA 7 cut(s) 186, 299, 401, 423, 668, 844, 1724
TaqII GACCGA 1 cut(s) 365
TasI AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
TatI WGTACW 3 cut(s) 512, 1111, 1584
TauI GCSGC 1 cut(s) 326
TfiI GAWTC 5 cut(s) 245, 296, 874, 1098, 1483
Tru1I TTAA 3 cut(s) 599, 729, 1305
Tru9I TTAA 3 cut(s) 599, 729, 1305
TscAI CASTG 5 cut(s) 325, 433, 927, 1465, 1507
TseI GCWGC 4 cut(s) 734, 822, 1670, 1673
TspGWI ACGGA 5 cut(s) 103, 257, 436, 469, 696
TspRI CASTG 5 cut(s) 325, 433, 927, 1465, 1507
Tth111I GACNNNGTC 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 1521
Vha464I CTTAAG 1 cut(s) 598
VpaK11BI GGWCC 2 cut(s) 609, 1463
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 1 cut(s) 1526
XceI RCATGY 1 cut(s) 644
XhoI CTCGAG 1 cut(s) 400
XmiI GTMKAC 3 cut(s) 239, 423, 1381
XmnI GAANNNNTTC 2 cut(s) 840, 1113
XspI CTAG 6 cut(s) 108, 278, 333, 567, 1041, 1167
ZrmI AGTACT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.