Rh1AG114800

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0016381
Physical Location & Seq
Reverse (-)
19722363 .. 19727930
5568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG114800.1

Sequence Viewer

Length: 1794 bp
ATGGCGGTCTCGGCTTTCAAATCCTCCACCAGAAGAAGCAATCCCACCGGTGCCTCAACTTCATCATCATCATCATCAGCTATTTCTAAACGGAGCACCGATATAGATACTAGTTCAACCAAGAAACCAAACCCACCAATCAGAAGATCCAGAAGTGTCAGCGCTTTCTCCAGAAGTGTCAGCACTCTCGACTCTCAAGATAATATTTTCTTGAACAAGAGAGACAACCCTCTCTTCTGGTCTACGGATTCCCCAACCGCTGTTGACCCCAAAACCCCGCTAGTCAAACCCGACAAAGATTCGAGGCCGGCAACCTCGTCCAGTGCGGCCGATACTAGAAGGGGACGGTCGGTGTCGCGGAACGCCGATGTTTTGGTCGGTCGGAGCCAGTCCAGAGTTGACTCGGGTCGGAGCCTGTCCAGAGTCGACACTGGCCGTCGCAACCGCTCCGTTTCCCGGTGTCCGGAGCCCAGGGGGCGTTCCGTCATTTCCAAGAGTGAAGATGAACAAGAATGTACTTCTACATTGAATAAAGGGGAGGAAGGCAAAAAGGGTGGGTTAGTTAGAACTAGCTCTGATGAGTTGGATCAGTTGAAAGGCTTAAGGACATGGTCCAGTCAGCATTCGCCTTTCCAGCCTTCACATGCAAACTTGTCCAGCTTGCAATCTTCGAATTGGGAAGACGGAGTTTCCACCGCAAGTTCCTTATCTGGAGCCGAAGAGAAAACTTTTAAAGCAGCTTGTGAACAGATGAATATGAATTATGGACATTCTGGTGATGATTTGTCGGTTCAAGCAGTTCATTTGGAAAATGATACCACAAGCAGCAATATATATGAAACAGTTCGATCTGAAGTGAGACGTGCTATCTCTGAGATTCAAATTGACCTTGAAAGTGCTATGCGAAGGGGCAATACTCCGGCACTGGCAACTTCTGACGTTTCTGATATCCCTCCTGACCTGGTAAATCCAAGTGCAGTTGAATTAGTTTTGGACATCAGAAGAGAATATGCCAAAAAACTTGAGCAGTCCAAGGAACGGGCTAGCAAACTTCAATCAGATCTGGCTGTTGAGGAGCACCGTGGACAAGAGCTCAGCAGAATCCTGAAGGAAGTACTTCCAGATCCCAAGATATCTAATGCGCCAAAATCTCGTCCTGGAAGAAAAGCTAGCATTGAAAGAAGAAAGATGTCAAAACGTCTAACAGAAGAAGCTCTGGCCTATTTTGATGAGTGTGTATCCCTGTCAACTTTTGATAGTTCTGACTTTTCATCGCCAGAGGATCCACCTTTCAACTTAGTTGGTATTAATACCCCTGTTGATAAAAGTCTATCTTTACTCCAAGAAAGTTCAAGTGCTTCAGTCATGAATAGCTCAAATCGTAGCCTCAATGAAAAACAGGCATTGAGCATCCAAAGTCAATTTACCAATGCCCACAATCCCTCAGGACTAATGGCCAGCAGTGGTCCTGGGGAGCCAACCTTGAATCAGATTAGTCCTAACAGTGCCAACAGAGCCAAAGAGTGGAAATTCTCATTTGCTCATAAGCCAGCTGAAACCCTTGAGCTACAACAAGACATTAGGAAGTACATCAGACATTTTGAGAAAGATGACATGGAATTGCAGAGTGCAAGATCCATCTCTTGTGATTTGGGTGAGTATCGTGTGCAGGCTGCAGCACAAAGTTATATGTTTGACAGGGTTTCATTTGGAAGTAGAATAGAGTCGAGGGGTATTTTACTCTGTGGCGGTGGTATTTCAAGTTCATTTTCTCCATTTGCTTCTTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

597

Amino Acids

65.43

Weight (kDa)

8.72

Isoelectric Point (pI)

73.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1524
AccBSI CCGCTC 1 cut(s) 447
AccI GTMKAC 2 cut(s) 242, 426
AccII CGCG 1 cut(s) 358
AccIII TCCGGA 1 cut(s) 463
AciI CCGC 8 cut(s) 5, 258, 278, 326, 358, 445, 696, 1749
AclWI GGATC 6 cut(s) 141, 594, 1118, 1277, 1290, 1629
AcoI YGGCCR 3 cut(s) 327, 433, 1455
AcsI RAATTY 1 cut(s) 1529
AcuI CTGAAG 3 cut(s) 873, 1127, 1344
AfaI GTAC 3 cut(s) 517, 1116, 1589
AfeI AGCGCT 1 cut(s) 163
AfiI CCNNNNNNNGG 4 cut(s) 456, 463, 1038, 1524
AflII CTTAAG 1 cut(s) 601
AgeI ACCGGT 1 cut(s) 47
AhlI ACTAGT 1 cut(s) 110
AjiI CACGTC 1 cut(s) 863
AjnI CCWGG 4 cut(s) 470, 960, 1156, 1468
Alw21I GWGCWC 3 cut(s) 98, 1080, 1095
Alw26I GTCTC 3 cut(s) 13, 216, 853
AlwI GGATC 6 cut(s) 141, 594, 1118, 1277, 1290, 1629
Ama87I CYCGRG 1 cut(s) 403
Aor13HI TCCGGA 1 cut(s) 463
Aor51HI AGCGCT 1 cut(s) 163
AoxI GGCC 5 cut(s) 305, 327, 433, 1218, 1455
ApeKI GCWGC 4 cut(s) 737, 825, 1673, 1676
ApoI RAATTY 1 cut(s) 1529
AseI ATTAAT 1 cut(s) 1308
AsiGI ACCGGT 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 843, 1116
AspLEI GCGC 2 cut(s) 164, 1144
AspS9I GGNCC 2 cut(s) 612, 1466
AsuC2I CCSGG 1 cut(s) 457
AsuHPI GGTGA 2 cut(s) 788, 1667
AsuII TTCGAA 1 cut(s) 671
AsuNHI GCTAGC 2 cut(s) 1043, 1169
AvaI CYCGRG 1 cut(s) 403
AvaII GGWCC 2 cut(s) 612, 1466
AxyI CCTNAGG 1 cut(s) 1444
BalI TGGCCA 1 cut(s) 1457
BamHI GGATCC 1 cut(s) 1282
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 2 cut(s) 471, 1095
BarI GAAGNNNNNNTAC 2 cut(s) 898, 930
BbsI GAAGAC 1 cut(s) 687
Bbv12I GWGCWC 3 cut(s) 98, 1080, 1095
BbvI GCAGC 4 cut(s) 749, 837, 1660, 1688
BccI CCATC 1 cut(s) 1646
BceAI ACGGC 1 cut(s) 420
BciT130I CCWGG 4 cut(s) 472, 962, 1158, 1470
BciVI GTATCC 1 cut(s) 1249
BcnI CCSGG 1 cut(s) 457
BcoDI GTCTC 3 cut(s) 13, 216, 853
BcuI ACTAGT 1 cut(s) 110
BfaI CTAG 6 cut(s) 111, 281, 336, 570, 1044, 1170
BfmI CTRYAG 1 cut(s) 1674
BfoI RGCGCY 1 cut(s) 165
BfrI CTTAAG 1 cut(s) 601
BfuI GTATCC 1 cut(s) 1249
BglI GCCNNNNNGGC 1 cut(s) 475
BglII AGATCT 1 cut(s) 1060
BisI GCNGC 5 cut(s) 327, 738, 826, 1674, 1677
BlpI GCTNAGC 1 cut(s) 1094
BlsI GCNGC 5 cut(s) 328, 739, 827, 1675, 1678
BmcAI AGTACT 1 cut(s) 1116
Bme1390I CCNGG 5 cut(s) 457, 472, 962, 1158, 1470
Bme18I GGWCC 2 cut(s) 612, 1466
BmeT110I CYCGRG 1 cut(s) 403
BmgBI CACGTC 1 cut(s) 863
BmgT120I GGNCC 2 cut(s) 612, 1466
BmiI GGNNCC 7 cut(s) 52, 386, 413, 468, 715, 1284, 1476
BmrFI CCNGG 5 cut(s) 457, 472, 962, 1158, 1470
BmsI GCATC 1 cut(s) 1419
BmtI GCTAGC 2 cut(s) 1047, 1173
BoxI GACNNNNGTC 1 cut(s) 405
BpiI GAAGAC 1 cut(s) 687
BpmI CTGGAG 2 cut(s) 154, 732
Bpu1102I GCTNAGC 1 cut(s) 1094
Bpu14I TTCGAA 1 cut(s) 671
BpuEI CTTGAG 3 cut(s) 180, 1043, 1583
BpuMI CCSGG 1 cut(s) 457
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 470, 471, 1032, 1081, 1469
BsaWI WCCGGW 2 cut(s) 47, 463
Bsc4I CCNNNNNNNGG 4 cut(s) 456, 463, 1038, 1524
Bse118I RCCGGY 2 cut(s) 47, 307
Bse1I ACTGG 5 cut(s) 321, 388, 436, 615, 930
Bse21I CCTNAGG 1 cut(s) 1444
BseAI TCCGGA 1 cut(s) 463
BseBI CCWGG 4 cut(s) 472, 962, 1158, 1470
BseDI CCNNGG 5 cut(s) 470, 471, 1032, 1081, 1469
BseGI GGATG 1 cut(s) 1410
BseLI CCNNNNNNNGG 4 cut(s) 456, 463, 1038, 1524
BseMII CTCAG 3 cut(s) 864, 1108, 1458
BseNI ACTGG 5 cut(s) 321, 388, 436, 615, 930
BseRI GAGGAG 1 cut(s) 1088
BseX3I CGGCCG 1 cut(s) 327
BseXI GCAGC 4 cut(s) 749, 837, 1660, 1688
BsgI GTGCAG 2 cut(s) 996, 1688
Bsh1236I CGCG 1 cut(s) 358
Bsh1285I CGRYCG 3 cut(s) 330, 350, 382
BshFI GGCC 5 cut(s) 307, 329, 435, 1220, 1457
BshNI GGYRCC 1 cut(s) 50
BshTI ACCGGT 1 cut(s) 47
BsiEI CGRYCG 3 cut(s) 330, 350, 382
BsiHKAI GWGCWC 3 cut(s) 98, 1080, 1095
BsiHKCI CYCGRG 1 cut(s) 403
BsiSI CCGG 5 cut(s) 48, 308, 457, 464, 920
BslFI GGGAC 1 cut(s) 357
BslI CCNNNNNNNGG 4 cut(s) 456, 463, 1038, 1524
BsmAI GTCTC 3 cut(s) 13, 216, 853
BsmBI CGTCTC 1 cut(s) 853
BsmFI GGGAC 1 cut(s) 357
BsmI GAATGC 1 cut(s) 622
BsnI GGCC 5 cut(s) 307, 329, 435, 1220, 1457
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 403
Bsp119I TTCGAA 1 cut(s) 671
Bsp1286I GDGCHC 4 cut(s) 98, 471, 1080, 1095
Bsp13I TCCGGA 1 cut(s) 463
Bsp143I GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
Bsp1720I GCTNAGC 1 cut(s) 1094
BspACI CCGC 8 cut(s) 5, 258, 278, 326, 358, 445, 696, 1749
BspANI GGCC 5 cut(s) 307, 329, 435, 1220, 1457
BspCNI CTCAG 3 cut(s) 865, 1107, 1457
BspEI TCCGGA 1 cut(s) 463
BspFNI CGCG 1 cut(s) 358
BspHI TCATGA 1 cut(s) 1365
BspLI GGNNCC 7 cut(s) 52, 386, 413, 468, 715, 1284, 1476
BspMAI CTGCAG 1 cut(s) 1678
BspOI GCTAGC 2 cut(s) 1047, 1173
BspPI GGATC 6 cut(s) 141, 594, 1118, 1277, 1290, 1629
BspT104I TTCGAA 1 cut(s) 671
BspT107I GGYRCC 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 601
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 447
BsrFI RCCGGY 2 cut(s) 47, 307
BsrI ACTGG 5 cut(s) 321, 388, 436, 615, 930
BssAI RCCGGY 2 cut(s) 47, 307
BssECI CCNNGG 5 cut(s) 470, 471, 1032, 1081, 1469
BssMI GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
BssT1I CCWWGG 1 cut(s) 1032
Bst2UI CCWGG 4 cut(s) 472, 962, 1158, 1470
Bst4CI ACNGT 4 cut(s) 348, 844, 1082, 1505
Bst6I CTCTTC 3 cut(s) 239, 714, 997
BstAFI CTTAAG 1 cut(s) 601
BstBI TTCGAA 1 cut(s) 671
BstC8I GCNNGC 7 cut(s) 309, 662, 1045, 1171, 1459, 1551, 1671
BstDEI CTNAG 4 cut(s) 873, 1094, 1297, 1444
BstDSI CCRYGG 1 cut(s) 1081
BstF5I GGATG 1 cut(s) 1410
BstFNI CGCG 1 cut(s) 358
BstH2I RGCGCY 1 cut(s) 165
BstHHI GCGC 2 cut(s) 164, 1144
BstKTI GATC 7 cut(s) 149, 589, 851, 1063, 1126, 1285, 1637
BstMAI GTCTC 3 cut(s) 13, 216, 853
BstMBI GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
BstMCI CGRYCG 3 cut(s) 330, 350, 382
BstMWI GCNNNNNNNGC 4 cut(s) 11, 475, 634, 1514
BstNI CCWGG 4 cut(s) 472, 962, 1158, 1470
BstNSI RCATGY 1 cut(s) 647
BstPAI GACNNNNGTC 1 cut(s) 405
BstSCI CCNGG 5 cut(s) 455, 470, 960, 1156, 1468
BstSFI CTRYAG 1 cut(s) 1674
BstUI CGCG 1 cut(s) 358
BstV1I GCAGC 4 cut(s) 749, 837, 1660, 1688
BstV2I GAAGAC 1 cut(s) 687
BstX2I RGATCY 5 cut(s) 146, 1060, 1123, 1282, 1634
BstYI RGATCY 5 cut(s) 146, 1060, 1123, 1282, 1634
BstZI CGGCCG 1 cut(s) 327
Bsu36I CCTNAGG 1 cut(s) 1444
BsuI GTATCC 1 cut(s) 1249
BsuRI GGCC 5 cut(s) 307, 329, 435, 1220, 1457
BtgI CCRYGG 1 cut(s) 1081
BtgZI GCGATG 1 cut(s) 1257
BtrI CACGTC 1 cut(s) 863
BtsCI GGATG 1 cut(s) 1410
BtsI GCAGTG 1 cut(s) 1468
BtsIMutI CAGTG 5 cut(s) 328, 429, 923, 1468, 1510
Cac8I GCNNGC 7 cut(s) 309, 662, 1045, 1171, 1459, 1551, 1671
CciI TCATGA 1 cut(s) 1365
CfoI GCGC 2 cut(s) 164, 1144
Cfr10I RCCGGY 2 cut(s) 47, 307
Cfr13I GGNCC 2 cut(s) 612, 1466
CsiI ACCWGGT 1 cut(s) 960
Csp6I GTAC 3 cut(s) 516, 1115, 1588
CspAI ACCGGT 1 cut(s) 47
CspCI CAANNNNNGTGG 2 cut(s) 535, 570
CviAII CATG 4 cut(s) 609, 644, 1366, 1615
CviQI GTAC 3 cut(s) 516, 1115, 1588
DdeI CTNAG 4 cut(s) 873, 1094, 1297, 1444
DpnI GATC 7 cut(s) 148, 588, 850, 1062, 1125, 1284, 1636
DpnII GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
DraI TTTAAA 1 cut(s) 733
EaeI YGGCCR 3 cut(s) 327, 433, 1455
EagI CGGCCG 1 cut(s) 327
Eam1104I CTCTTC 3 cut(s) 239, 714, 997
EarI CTCTTC 3 cut(s) 239, 714, 997
Ecl136II GAGCTC 1 cut(s) 1093
EclXI CGGCCG 1 cut(s) 327
Eco130I CCWWGG 1 cut(s) 1032
Eco24I GRGCYC 2 cut(s) 471, 1095
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 949, 1134
Eco47I GGWCC 2 cut(s) 612, 1466
Eco47III AGCGCT 1 cut(s) 163
Eco52I CGGCCG 1 cut(s) 327
Eco53kI GAGCTC 1 cut(s) 1093
Eco57I CTGAAG 3 cut(s) 873, 1127, 1344
Eco81I CCTNAGG 1 cut(s) 1444
Eco88I CYCGRG 1 cut(s) 403
EcoICRI GAGCTC 1 cut(s) 1093
EcoRII CCWGG 4 cut(s) 470, 960, 1156, 1468
EcoRV GATATC 2 cut(s) 949, 1134
EcoT14I CCWWGG 1 cut(s) 1032
EcoT38I GRGCYC 2 cut(s) 471, 1095
ErhI CCWWGG 1 cut(s) 1032
Esp3I CGTCTC 1 cut(s) 853
FaeI CATG 4 cut(s) 612, 647, 1369, 1618
FalI AAGNNNNNCTT 2 cut(s) 1318, 1350
FaqI GGGAC 1 cut(s) 357
FatI CATG 4 cut(s) 608, 643, 1365, 1614
FauI CCCGC 1 cut(s) 285
FblI GTMKAC 2 cut(s) 242, 426
Fnu4HI GCNGC 5 cut(s) 327, 738, 826, 1674, 1677
FokI GGATG 1 cut(s) 1397
FriOI GRGCYC 2 cut(s) 471, 1095
Fsp4HI GCNGC 5 cut(s) 327, 738, 826, 1674, 1677
FspBI CTAG 6 cut(s) 111, 281, 336, 570, 1044, 1170
GlaI GCGC 2 cut(s) 163, 1143
GluI GCNGC 5 cut(s) 327, 738, 826, 1674, 1677
GsuI CTGGAG 2 cut(s) 154, 732
HaeII RGCGCY 1 cut(s) 165
HaeIII GGCC 5 cut(s) 307, 329, 435, 1220, 1457
HapII CCGG 5 cut(s) 48, 308, 457, 464, 920
HhaI GCGC 2 cut(s) 164, 1144
Hin1II CATG 4 cut(s) 612, 647, 1369, 1618
Hin6I GCGC 2 cut(s) 162, 1142
HinP1I GCGC 2 cut(s) 162, 1142
HincII GTYRAC 4 cut(s) 265, 400, 427, 1248
HindII GTYRAC 4 cut(s) 265, 400, 427, 1248
HinfI GANTC 9 cut(s) 191, 248, 299, 401, 423, 877, 1101, 1486, 1724
HpaII CCGG 5 cut(s) 48, 308, 457, 464, 920
HphI GGTGA 2 cut(s) 788, 1667
Hpy166II GTNNAC 7 cut(s) 243, 265, 400, 427, 746, 1085, 1248
Hpy8I GTNNAC 7 cut(s) 243, 265, 400, 427, 746, 1085, 1248
Hpy99I CGWCG 1 cut(s) 441
HpyAV CCTTC 5 cut(s) 333, 536, 648, 900, 1102
HpyCH4III ACNGT 4 cut(s) 348, 844, 1082, 1505
HpyCH4IV ACGT 3 cut(s) 862, 939, 1198
HpyCH4V TGCA 7 cut(s) 647, 664, 977, 1624, 1631, 1669, 1676
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 475, 634, 1514
HpyF3I CTNAG 4 cut(s) 873, 1094, 1297, 1444
HpySE526I ACGT 3 cut(s) 862, 939, 1198
Hsp92II CATG 4 cut(s) 612, 647, 1369, 1618
HspAI GCGC 2 cut(s) 162, 1142
Kpn2I TCCGGA 1 cut(s) 463
KroI GCCGGC 1 cut(s) 307
KroNI GCCGGC 1 cut(s) 309
Kzo9I GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
LmnI GCTCC 8 cut(s) 93, 384, 411, 452, 466, 713, 1075, 1474
Lsp1109I GCAGC 4 cut(s) 749, 837, 1660, 1688
LweI GCATC 1 cut(s) 1419
MabI ACCWGGT 1 cut(s) 960
MaeI CTAG 6 cut(s) 111, 281, 336, 570, 1044, 1170
MaeII ACGT 3 cut(s) 862, 939, 1198
MalI GATC 7 cut(s) 148, 588, 850, 1062, 1125, 1284, 1636
MbiI CCGCTC 1 cut(s) 447
MboI GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
MflI RGATCY 5 cut(s) 146, 1060, 1123, 1282, 1634
MhlI GDGCHC 4 cut(s) 98, 471, 1080, 1095
MlsI TGGCCA 1 cut(s) 1457
MluCI AATT 7 cut(s) 673, 760, 882, 983, 1421, 1529, 1619
MluNI TGGCCA 1 cut(s) 1457
MlyI GAGTC 4 cut(s) 185, 395, 432, 1733
MmeI TCCRAC 3 cut(s) 362, 389, 564
Mox20I TGGCCA 1 cut(s) 1457
MroI TCCGGA 1 cut(s) 463
MroNI GCCGGC 1 cut(s) 307
MroXI GAANNNNTTC 2 cut(s) 843, 1116
MscI TGGCCA 1 cut(s) 1457
MseI TTAA 3 cut(s) 602, 732, 1308
MslI CAYNNNNRTG 1 cut(s) 774
Msp20I TGGCCA 1 cut(s) 1457
MspA1I CMGCKG 2 cut(s) 260, 1553
MspCI CTTAAG 1 cut(s) 601
MspI CCGG 5 cut(s) 48, 308, 457, 464, 920
MspR9I CCNGG 5 cut(s) 457, 472, 962, 1158, 1470
Mva1269I GAATGC 1 cut(s) 622
MvaI CCWGG 4 cut(s) 472, 962, 1158, 1470
MvnI CGCG 1 cut(s) 358
MwoI GCNNNNNNNGC 4 cut(s) 11, 475, 634, 1514
NaeI GCCGGC 1 cut(s) 309
NciI CCSGG 1 cut(s) 457
NdeII GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
NgoMIV GCCGGC 1 cut(s) 307
NheI GCTAGC 2 cut(s) 1043, 1169
NlaIII CATG 4 cut(s) 612, 647, 1369, 1618
NlaIV GGNNCC 7 cut(s) 52, 386, 413, 468, 715, 1284, 1476
NspI RCATGY 1 cut(s) 647
NspV TTCGAA 1 cut(s) 671
PagI TCATGA 1 cut(s) 1365
PasI CCCWGGG 1 cut(s) 471
PctI GAATGC 1 cut(s) 622
PdiI GCCGGC 1 cut(s) 309
PdmI GAANNNNTTC 2 cut(s) 843, 1116
PfeI GAWTC 5 cut(s) 248, 299, 877, 1101, 1486
PflFI GACNNNGTC 1 cut(s) 610
PflMI CCANNNNNTGG 1 cut(s) 1524
PfoI TCCNGGA 1 cut(s) 1156
PinAI ACCGGT 1 cut(s) 47
PkrI GCNGC 5 cut(s) 328, 739, 827, 1675, 1678
PleI GAGTC 4 cut(s) 185, 395, 431, 1732
PpsI GAGTC 4 cut(s) 185, 395, 431, 1732
PshAI GACNNNNGTC 1 cut(s) 405
PshBI ATTAAT 1 cut(s) 1308
Psp124BI GAGCTC 1 cut(s) 1095
Psp6I CCWGG 4 cut(s) 470, 960, 1156, 1468
PspGI CCWGG 4 cut(s) 470, 960, 1156, 1468
PspN4I GGNNCC 7 cut(s) 52, 386, 413, 468, 715, 1284, 1476
PspPI GGNCC 2 cut(s) 612, 1466
PsrI GAACNNNNNNTAC 2 cut(s) 1747, 1779
PstI CTGCAG 1 cut(s) 1678
PsuI RGATCY 5 cut(s) 146, 1060, 1123, 1282, 1634
PsyI GACNNNGTC 1 cut(s) 610
PvuII CAGCTG 1 cut(s) 1553
RsaI GTAC 3 cut(s) 517, 1116, 1589
RsaNI GTAC 3 cut(s) 516, 1115, 1588
RseI CAYNNNNRTG 1 cut(s) 774
SacI GAGCTC 1 cut(s) 1095
SalI GTCGAC 1 cut(s) 425
SaqAI TTAA 3 cut(s) 602, 732, 1308
SatI GCNGC 5 cut(s) 327, 738, 826, 1674, 1677
Sau3AI GATC 7 cut(s) 146, 586, 848, 1060, 1123, 1282, 1634
Sau96I GGNCC 2 cut(s) 612, 1466
ScaI AGTACT 1 cut(s) 1116
SchI GAGTC 4 cut(s) 185, 395, 432, 1733
ScrFI CCNGG 5 cut(s) 457, 472, 962, 1158, 1470
SduI GDGCHC 4 cut(s) 98, 471, 1080, 1095
SexAI ACCWGGT 1 cut(s) 960
SfaNI GCATC 1 cut(s) 1419
SfcI CTRYAG 1 cut(s) 1674
SfuI TTCGAA 1 cut(s) 671
SgrAI CRCCGGYG 1 cut(s) 47
SinI GGWCC 2 cut(s) 612, 1466
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 4 cut(s) 195, 601, 1022, 1562
SmoI CTYRAG 4 cut(s) 195, 601, 1022, 1562
SpeI ACTAGT 1 cut(s) 110
Sse9I AATT 7 cut(s) 673, 760, 882, 983, 1421, 1529, 1619
SsiI CCGC 8 cut(s) 5, 258, 278, 326, 358, 445, 696, 1749
SspI AATATT 1 cut(s) 205
SspMI CTAG 6 cut(s) 111, 281, 336, 570, 1044, 1170
SstI GAGCTC 1 cut(s) 1095
StyD4I CCNGG 5 cut(s) 455, 470, 960, 1156, 1468
StyI CCWWGG 1 cut(s) 1032
TaaI ACNGT 4 cut(s) 348, 844, 1082, 1505
TaiI ACGT 3 cut(s) 865, 942, 1201
TaqI TCGA 6 cut(s) 189, 302, 426, 671, 847, 1727
TaqII GACCGA 1 cut(s) 368
TasI AATT 7 cut(s) 673, 760, 882, 983, 1421, 1529, 1619
TatI WGTACW 3 cut(s) 515, 1114, 1587
TauI GCSGC 1 cut(s) 329
TfiI GAWTC 5 cut(s) 248, 299, 877, 1101, 1486
Tru1I TTAA 3 cut(s) 602, 732, 1308
Tru9I TTAA 3 cut(s) 602, 732, 1308
TscAI CASTG 5 cut(s) 328, 436, 930, 1468, 1510
TseI GCWGC 4 cut(s) 737, 825, 1673, 1676
TspGWI ACGGA 5 cut(s) 106, 260, 439, 472, 699
TspRI CASTG 5 cut(s) 328, 436, 930, 1468, 1510
Tth111I GACNNNGTC 1 cut(s) 610
Van91I CCANNNNNTGG 1 cut(s) 1524
Vha464I CTTAAG 1 cut(s) 601
VpaK11BI GGWCC 2 cut(s) 612, 1466
VspI ATTAAT 1 cut(s) 1308
XapI RAATTY 1 cut(s) 1529
XceI RCATGY 1 cut(s) 647
XmiI GTMKAC 2 cut(s) 242, 426
XmnI GAANNNNTTC 2 cut(s) 843, 1116
XspI CTAG 6 cut(s) 111, 281, 336, 570, 1044, 1170
ZrmI AGTACT 1 cut(s) 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.