Rh1BG087500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0016381
Physical Location & Seq
Reverse (-)
13885039 .. 13890763
5725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG087500.1

Sequence Viewer

Length: 1803 bp
ATGGCGGTCTCGGCTTTCAAATCCTCCACCAGAAGAAGCAATCCCACCGGTGCCTCAACTTCTTCATCATCATCAGCTATTTCTAAACGGAGCACCGATATAGATATTAGTTCAACCAAGAAACCAAACCCACCAATCAGAAGATCCAGAAGTGTCAGCGCTTTCTCAAGGACCACCACTCTCGACTCTCAAGATAATATTTTCTTGAACAAGAGAGACAACCCTCTCTTCTGGTCTACGGATTCCCCAACCGCTGTTGACCCCAAAACCCCGCTAGTCAAACCCGACAAAGATTCGAGGCCGGCAACCTCGTCCAGTGTTGCTGATTCTAGAAGGGGACGGTCGGTGTCGCGGAACGCTGATGTTTTGGTCGGTCGGAGCCAGTCCAGAGTTGACTCGGGTCGGACCTCGTCGGGTCGGAGCCTGTCCAGAGTCGACACTGGCCGTCGCAACCGCTCCGTTTCCCGGTGTCCGGAGCCCAGGGGGCGTTCCGTCATTTCCAAGAGTGAAGATGAACAAGAATGTACTTCTACATTGAATAAAGGGGAGGAAGACAAAAAGGGTGGGTTAGTTAGAACTAGCTCTGATGAGTTGGATCAGTTGAAAGGCTTAAGGACATGGTCCAGTCAGCATTCTCCTTTCCAGCCTTCACATGCAAACATGTCCAGCTTGCAATCTTCGAATTGGGAAGACGGAGTTTCCACCGCAAGTTCCTTATCTGGAGCCGAAGAGAAAACTTTTAAAGCAGCTTGTGAACAGATGAATATAAATTATGGACATTCCGGTGATGATTTGTCGGTTCAAGCAATTCATTTGGAAGATGATACCACAAGTAGTAATATATATGAAACAGTTCGATCTGAAGTGAGACGTGCTATCTCTGAGATTCAAATTGACCTTGAAAGTGCTATGCGAAGGGGCAATACTCCGGCACTAGCAACCTCTGACATTTCTGATATCCCTCCTGACCTGGTAAATCCAAGTGCCGTTGAATTAATTTTGGACATCAGAAGAGAATATGCCAAAAAACTTGAGCAGTCCAAGGAACGGGCTAGAAAACTTCAATCAGATCTGGCTGTAGAGGAGCACCGCGGACAAGAGCTCAGCAGAATCCTGAAGGAAGTACTTCCAGATCCCAAAATATCTAATGCGCCAAAATCTCGTCCGGGAAGAAAAGCTAGCATTGAAAGAAGAAAGATGTCAAAACGTCTAACAGAAGAAGCCCTGGCCTATTTTGATGAGTGTGTATCCCTGTCAACTTTTGATAGTTCTGACTTCTCATCGCCAGAGGATCCACCTTTCAACTTAGTTGGTATTAATACCCCTGTTGATAAAGGTCTATCTTTACTCCAAGAAAGTTCAAGTGCTTCAGTCATGAACAGCTCAAACCGTAGCCTTAATGAAAAACAGGCGTTGAGCATCCAAAGTCAATTTACCAATGCCCACAATCCTTCAGGACTAATGGTCAGCAGTGGTCCTGGGGAGCTAACCTTGAATCAGATTAGTCCTAACAGTGCCAACAGAGCCAAAGATTGGAAATTCTCATTTGCTCATAAGCCAGCTGAAACCCTTGAGCTTCAACAAGACATTAGAAAGTACATCAGACATTTTGAGAAAGATGACATGGAATTGCAGAGTGTAAGATCCATCTCTTGTGATTTGGGTGAGTATAGCTTGCAGGCTGCAGCACAAAGTTATATGTTTGACAGGGTTTTATTTGGAAATAGAATAGAGTCGAGGGGTATTTTACTCTGTGGCGGTGGTATTTCAAGTTCATTTTCTCCATTTGCTTCTTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

600

Amino Acids

65.99

Weight (kDa)

8.57

Isoelectric Point (pI)

76.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1533
AccBSI CCGCTC 1 cut(s) 456
AccI GTMKAC 2 cut(s) 236, 435
AccII CGCG 2 cut(s) 352, 1092
AccIII TCCGGA 1 cut(s) 472
AciI CCGC 9 cut(s) 5, 252, 272, 352, 454, 705, 1090, 1092, 1758
AclWI GGATC 6 cut(s) 138, 603, 1127, 1286, 1299, 1638
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 1 cut(s) 1538
AcuI CTGAAG 4 cut(s) 882, 1136, 1353, 1437
AfaI GTAC 3 cut(s) 526, 1125, 1598
AfeI AGCGCT 1 cut(s) 160
AfiI CCNNNNNNNGG 4 cut(s) 465, 472, 1047, 1533
AflII CTTAAG 1 cut(s) 610
AflIII ACRYGT 1 cut(s) 660
AgeI ACCGGT 1 cut(s) 47
AhdI GACNNNNNGTC 1 cut(s) 1463
AjiI CACGTC 1 cut(s) 872
AjnI CCWGG 4 cut(s) 479, 969, 1224, 1477
Alw21I GWGCWC 3 cut(s) 95, 1089, 1104
Alw26I GTCTC 3 cut(s) 13, 210, 862
AlwI GGATC 6 cut(s) 138, 603, 1127, 1286, 1299, 1638
Ama87I CYCGRG 1 cut(s) 397
Aor13HI TCCGGA 1 cut(s) 472
Aor51HI AGCGCT 1 cut(s) 160
AoxI GGCC 3 cut(s) 299, 442, 1227
ApeKI GCWGC 3 cut(s) 746, 1682, 1685
ApoI RAATTY 1 cut(s) 1538
AseI ATTAAT 2 cut(s) 995, 1317
AsiGI ACCGGT 1 cut(s) 47
Asp700I GAANNNNTTC 2 cut(s) 852, 1125
AspLEI GCGC 2 cut(s) 161, 1153
AspS9I GGNCC 4 cut(s) 171, 405, 621, 1475
AsuC2I CCSGG 2 cut(s) 466, 1167
AsuHPI GGTGA 2 cut(s) 797, 1676
AsuII TTCGAA 1 cut(s) 680
AsuNHI GCTAGC 1 cut(s) 1178
AvaI CYCGRG 1 cut(s) 397
AvaII GGWCC 4 cut(s) 171, 405, 621, 1475
BamHI GGATCC 1 cut(s) 1291
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 2 cut(s) 480, 1104
BarI GAAGNNNNNNTAC 2 cut(s) 907, 939
BbsI GAAGAC 2 cut(s) 558, 696
Bbv12I GWGCWC 3 cut(s) 95, 1089, 1104
BbvI GCAGC 3 cut(s) 758, 1669, 1697
BccI CCATC 1 cut(s) 1655
BceAI ACGGC 2 cut(s) 429, 971
BciT130I CCWGG 4 cut(s) 481, 971, 1226, 1479
BciVI GTATCC 1 cut(s) 1258
BcnI CCSGG 2 cut(s) 466, 1167
BcoDI GTCTC 3 cut(s) 13, 210, 862
BfaI CTAG 6 cut(s) 275, 330, 579, 935, 1053, 1179
BfmI CTRYAG 2 cut(s) 1077, 1683
BfoI RGCGCY 1 cut(s) 162
BfrI CTTAAG 1 cut(s) 610
BfuI GTATCC 1 cut(s) 1258
BglI GCCNNNNNGGC 1 cut(s) 484
BglII AGATCT 1 cut(s) 1069
BisI GCNGC 3 cut(s) 747, 1683, 1686
BlpI GCTNAGC 1 cut(s) 1103
BlsI GCNGC 3 cut(s) 748, 1684, 1687
BmcAI AGTACT 1 cut(s) 1125
Bme1390I CCNGG 6 cut(s) 466, 481, 971, 1167, 1226, 1479
Bme18I GGWCC 4 cut(s) 171, 405, 621, 1475
BmeRI GACNNNNNGTC 1 cut(s) 1463
BmeT110I CYCGRG 1 cut(s) 397
BmgBI CACGTC 1 cut(s) 872
BmgT120I GGNCC 4 cut(s) 171, 405, 621, 1475
BmiI GGNNCC 6 cut(s) 52, 380, 422, 477, 724, 1293
BmrFI CCNGG 6 cut(s) 466, 481, 971, 1167, 1226, 1479
BmsI GCATC 1 cut(s) 1428
BmtI GCTAGC 1 cut(s) 1182
BoxI GACNNNNGTC 1 cut(s) 399
BpiI GAAGAC 2 cut(s) 558, 696
BpmI CTGGAG 1 cut(s) 741
Bpu1102I GCTNAGC 1 cut(s) 1103
Bpu14I TTCGAA 1 cut(s) 680
BpuEI CTTGAG 4 cut(s) 151, 174, 1052, 1592
BpuMI CCSGG 2 cut(s) 466, 1167
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 6 cut(s) 479, 480, 1041, 1090, 1224, 1478
BsaWI WCCGGW 3 cut(s) 47, 472, 782
Bsc4I CCNNNNNNNGG 4 cut(s) 465, 472, 1047, 1533
Bse118I RCCGGY 2 cut(s) 47, 301
Bse1I ACTGG 4 cut(s) 315, 382, 445, 624
BseAI TCCGGA 1 cut(s) 472
BseBI CCWGG 4 cut(s) 481, 971, 1226, 1479
BseDI CCNNGG 6 cut(s) 479, 480, 1041, 1090, 1224, 1478
BseGI GGATG 1 cut(s) 1419
BseLI CCNNNNNNNGG 4 cut(s) 465, 472, 1047, 1533
BseMII CTCAG 2 cut(s) 873, 1117
BseNI ACTGG 4 cut(s) 315, 382, 445, 624
BseRI GAGGAG 1 cut(s) 1097
BseXI GCAGC 3 cut(s) 758, 1669, 1697
Bsh1236I CGCG 2 cut(s) 352, 1092
Bsh1285I CGRYCG 2 cut(s) 344, 376
BshFI GGCC 3 cut(s) 301, 444, 1229
BshNI GGYRCC 1 cut(s) 50
BshTI ACCGGT 1 cut(s) 47
BsiEI CGRYCG 2 cut(s) 344, 376
BsiHKAI GWGCWC 3 cut(s) 95, 1089, 1104
BsiHKCI CYCGRG 1 cut(s) 397
BsiSI CCGG 7 cut(s) 48, 302, 466, 473, 783, 929, 1166
BslFI GGGAC 1 cut(s) 351
BslI CCNNNNNNNGG 4 cut(s) 465, 472, 1047, 1533
BsmAI GTCTC 3 cut(s) 13, 210, 862
BsmBI CGTCTC 1 cut(s) 862
BsmFI GGGAC 1 cut(s) 351
BsmI GAATGC 1 cut(s) 631
BsnI GGCC 3 cut(s) 301, 444, 1229
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 397
Bsp119I TTCGAA 1 cut(s) 680
Bsp1286I GDGCHC 4 cut(s) 95, 480, 1089, 1104
Bsp13I TCCGGA 1 cut(s) 472
Bsp143I GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
Bsp1720I GCTNAGC 1 cut(s) 1103
BspACI CCGC 9 cut(s) 5, 252, 272, 352, 454, 705, 1090, 1092, 1758
BspANI GGCC 3 cut(s) 301, 444, 1229
BspCNI CTCAG 2 cut(s) 874, 1116
BspEI TCCGGA 1 cut(s) 472
BspFNI CGCG 2 cut(s) 352, 1092
BspHI TCATGA 1 cut(s) 1374
BspLI GGNNCC 6 cut(s) 52, 380, 422, 477, 724, 1293
BspMAI CTGCAG 1 cut(s) 1687
BspOI GCTAGC 1 cut(s) 1182
BspPI GGATC 6 cut(s) 138, 603, 1127, 1286, 1299, 1638
BspT104I TTCGAA 1 cut(s) 680
BspT107I GGYRCC 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 610
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 456
BsrFI RCCGGY 2 cut(s) 47, 301
BsrI ACTGG 4 cut(s) 315, 382, 445, 624
BssAI RCCGGY 2 cut(s) 47, 301
BssECI CCNNGG 6 cut(s) 479, 480, 1041, 1090, 1224, 1478
BssMI GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
BssT1I CCWWGG 1 cut(s) 1041
Bst2UI CCWGG 4 cut(s) 481, 971, 1226, 1479
Bst4CI ACNGT 4 cut(s) 342, 853, 1391, 1514
Bst6I CTCTTC 3 cut(s) 233, 723, 1006
BstAFI CTTAAG 1 cut(s) 610
BstBI TTCGAA 1 cut(s) 680
BstC8I GCNNGC 6 cut(s) 303, 671, 1180, 1560, 1676, 1680
BstDEI CTNAG 3 cut(s) 882, 1103, 1306
BstDSI CCRYGG 1 cut(s) 1090
BstF5I GGATG 1 cut(s) 1419
BstFNI CGCG 2 cut(s) 352, 1092
BstH2I RGCGCY 1 cut(s) 162
BstHHI GCGC 2 cut(s) 161, 1153
BstKTI GATC 7 cut(s) 146, 598, 860, 1072, 1135, 1294, 1646
BstMAI GTCTC 3 cut(s) 13, 210, 862
BstMBI GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
BstMCI CGRYCG 2 cut(s) 344, 376
BstMWI GCNNNNNNNGC 3 cut(s) 11, 484, 1523
BstNI CCWGG 4 cut(s) 481, 971, 1226, 1479
BstNSI RCATGY 2 cut(s) 656, 664
BstPAI GACNNNNGTC 1 cut(s) 399
BstSCI CCNGG 6 cut(s) 464, 479, 969, 1165, 1224, 1477
BstSFI CTRYAG 2 cut(s) 1077, 1683
BstUI CGCG 2 cut(s) 352, 1092
BstV1I GCAGC 3 cut(s) 758, 1669, 1697
BstV2I GAAGAC 2 cut(s) 558, 696
BstX2I RGATCY 5 cut(s) 143, 1069, 1132, 1291, 1643
BstYI RGATCY 5 cut(s) 143, 1069, 1132, 1291, 1643
BsuI GTATCC 1 cut(s) 1258
BsuRI GGCC 3 cut(s) 301, 444, 1229
BtgI CCRYGG 1 cut(s) 1090
BtgZI GCGATG 1 cut(s) 1266
BtrI CACGTC 1 cut(s) 872
BtsCI GGATG 1 cut(s) 1419
BtsI GCAGTG 1 cut(s) 1477
BtsIMutI CAGTG 4 cut(s) 322, 438, 1477, 1519
Cac8I GCNNGC 6 cut(s) 303, 671, 1180, 1560, 1676, 1680
CciI TCATGA 1 cut(s) 1374
CfoI GCGC 2 cut(s) 161, 1153
Cfr10I RCCGGY 2 cut(s) 47, 301
Cfr13I GGNCC 4 cut(s) 171, 405, 621, 1475
Cfr42I CCGCGG 1 cut(s) 1093
CsiI ACCWGGT 1 cut(s) 969
Csp6I GTAC 3 cut(s) 525, 1124, 1597
CspAI ACCGGT 1 cut(s) 47
CspCI CAANNNNNGTGG 2 cut(s) 544, 579
CviAII CATG 5 cut(s) 618, 653, 661, 1375, 1624
CviQI GTAC 3 cut(s) 525, 1124, 1597
DdeI CTNAG 3 cut(s) 882, 1103, 1306
DpnI GATC 7 cut(s) 145, 597, 859, 1071, 1134, 1293, 1645
DpnII GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
DraI TTTAAA 1 cut(s) 742
DriI GACNNNNNGTC 1 cut(s) 1463
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 3 cut(s) 233, 723, 1006
Eam1105I GACNNNNNGTC 1 cut(s) 1463
EarI CTCTTC 3 cut(s) 233, 723, 1006
Ecl136II GAGCTC 1 cut(s) 1102
Eco130I CCWWGG 1 cut(s) 1041
Eco24I GRGCYC 2 cut(s) 480, 1104
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 4 cut(s) 171, 405, 621, 1475
Eco47III AGCGCT 1 cut(s) 160
Eco53kI GAGCTC 1 cut(s) 1102
Eco57I CTGAAG 4 cut(s) 882, 1136, 1353, 1437
Eco88I CYCGRG 1 cut(s) 397
EcoICRI GAGCTC 1 cut(s) 1102
EcoRII CCWGG 4 cut(s) 479, 969, 1224, 1477
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 1 cut(s) 1041
EcoT38I GRGCYC 2 cut(s) 480, 1104
ErhI CCWWGG 1 cut(s) 1041
Esp3I CGTCTC 1 cut(s) 862
FaeI CATG 5 cut(s) 621, 656, 664, 1378, 1627
FaqI GGGAC 1 cut(s) 351
FatI CATG 5 cut(s) 617, 652, 660, 1374, 1623
FauI CCCGC 1 cut(s) 279
FblI GTMKAC 2 cut(s) 236, 435
Fnu4HI GCNGC 3 cut(s) 747, 1683, 1686
FokI GGATG 1 cut(s) 1406
FriOI GRGCYC 2 cut(s) 480, 1104
Fsp4HI GCNGC 3 cut(s) 747, 1683, 1686
FspBI CTAG 6 cut(s) 275, 330, 579, 935, 1053, 1179
GlaI GCGC 2 cut(s) 160, 1152
GluI GCNGC 3 cut(s) 747, 1683, 1686
GsuI CTGGAG 1 cut(s) 741
HaeII RGCGCY 1 cut(s) 162
HaeIII GGCC 3 cut(s) 301, 444, 1229
HapII CCGG 7 cut(s) 48, 302, 466, 473, 783, 929, 1166
HhaI GCGC 2 cut(s) 161, 1153
Hin1II CATG 5 cut(s) 621, 656, 664, 1378, 1627
Hin6I GCGC 2 cut(s) 159, 1151
HinP1I GCGC 2 cut(s) 159, 1151
HincII GTYRAC 4 cut(s) 259, 394, 436, 1257
HindII GTYRAC 4 cut(s) 259, 394, 436, 1257
HpaII CCGG 7 cut(s) 48, 302, 466, 473, 783, 929, 1166
HphI GGTGA 2 cut(s) 797, 1676
Hpy166II GTNNAC 6 cut(s) 237, 259, 394, 436, 755, 1257
Hpy8I GTNNAC 6 cut(s) 237, 259, 394, 436, 755, 1257
Hpy99I CGWCG 2 cut(s) 415, 450
HpyAV CCTTC 5 cut(s) 327, 657, 909, 1111, 1461
HpyCH4III ACNGT 4 cut(s) 342, 853, 1391, 1514
HpyCH4IV ACGT 2 cut(s) 871, 1207
HpyCH4V TGCA 5 cut(s) 656, 673, 1633, 1678, 1685
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 484, 1523
HpyF3I CTNAG 3 cut(s) 882, 1103, 1306
HpySE526I ACGT 2 cut(s) 871, 1207
Hsp92II CATG 5 cut(s) 621, 656, 664, 1378, 1627
HspAI GCGC 2 cut(s) 159, 1151
Kpn2I TCCGGA 1 cut(s) 472
KroI GCCGGC 1 cut(s) 301
KroNI GCCGGC 1 cut(s) 303
KspI CCGCGG 1 cut(s) 1093
Kzo9I GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
LmnI GCTCC 8 cut(s) 90, 378, 420, 461, 475, 722, 1084, 1483
Lsp1109I GCAGC 3 cut(s) 758, 1669, 1697
LweI GCATC 1 cut(s) 1428
MabI ACCWGGT 1 cut(s) 969
MaeI CTAG 6 cut(s) 275, 330, 579, 935, 1053, 1179
MaeII ACGT 2 cut(s) 871, 1207
MalI GATC 7 cut(s) 145, 597, 859, 1071, 1134, 1293, 1645
MbiI CCGCTC 1 cut(s) 456
MboI GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
MflI RGATCY 5 cut(s) 143, 1069, 1132, 1291, 1643
MhlI GDGCHC 4 cut(s) 95, 480, 1089, 1104
MluCI AATT 9 cut(s) 682, 769, 807, 891, 992, 996, 1430, 1538, 1628
MlyI GAGTC 4 cut(s) 179, 389, 441, 1742
MmeI TCCRAC 4 cut(s) 356, 383, 398, 573
MroI TCCGGA 1 cut(s) 472
MroNI GCCGGC 1 cut(s) 301
MroXI GAANNNNTTC 2 cut(s) 852, 1125
MseI TTAA 5 cut(s) 611, 741, 995, 1317, 1398
MslI CAYNNNNRTG 1 cut(s) 783
MspA1I CMGCKG 3 cut(s) 254, 1092, 1562
MspCI CTTAAG 1 cut(s) 610
MspI CCGG 7 cut(s) 48, 302, 466, 473, 783, 929, 1166
MspR9I CCNGG 6 cut(s) 466, 481, 971, 1167, 1226, 1479
Mva1269I GAATGC 1 cut(s) 631
MvaI CCWGG 4 cut(s) 481, 971, 1226, 1479
MvnI CGCG 2 cut(s) 352, 1092
MwoI GCNNNNNNNGC 3 cut(s) 11, 484, 1523
NaeI GCCGGC 1 cut(s) 303
NciI CCSGG 2 cut(s) 466, 1167
NdeII GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
NgoMIV GCCGGC 1 cut(s) 301
NheI GCTAGC 1 cut(s) 1178
NlaIII CATG 5 cut(s) 621, 656, 664, 1378, 1627
NlaIV GGNNCC 6 cut(s) 52, 380, 422, 477, 724, 1293
NspI RCATGY 2 cut(s) 656, 664
NspV TTCGAA 1 cut(s) 680
PagI TCATGA 1 cut(s) 1374
PasI CCCWGGG 1 cut(s) 480
PciI ACATGT 1 cut(s) 660
PctI GAATGC 1 cut(s) 631
PdiI GCCGGC 1 cut(s) 303
PdmI GAANNNNTTC 2 cut(s) 852, 1125
PfeI GAWTC 6 cut(s) 242, 293, 326, 886, 1110, 1495
PflFI GACNNNGTC 2 cut(s) 409, 619
PflMI CCANNNNNTGG 1 cut(s) 1533
PfoI TCCNGGA 1 cut(s) 1165
PinAI ACCGGT 1 cut(s) 47
PkrI GCNGC 3 cut(s) 748, 1684, 1687
PleI GAGTC 4 cut(s) 179, 389, 440, 1741
PpsI GAGTC 4 cut(s) 179, 389, 440, 1741
PscI ACATGT 1 cut(s) 660
PshAI GACNNNNGTC 1 cut(s) 399
PshBI ATTAAT 2 cut(s) 995, 1317
Psp124BI GAGCTC 1 cut(s) 1104
Psp6I CCWGG 4 cut(s) 479, 969, 1224, 1477
PspGI CCWGG 4 cut(s) 479, 969, 1224, 1477
PspN4I GGNNCC 6 cut(s) 52, 380, 422, 477, 724, 1293
PspPI GGNCC 4 cut(s) 171, 405, 621, 1475
PsrI GAACNNNNNNTAC 2 cut(s) 1756, 1788
PstI CTGCAG 1 cut(s) 1687
PsuI RGATCY 5 cut(s) 143, 1069, 1132, 1291, 1643
PsyI GACNNNGTC 2 cut(s) 409, 619
PvuII CAGCTG 1 cut(s) 1562
RsaI GTAC 3 cut(s) 526, 1125, 1598
RsaNI GTAC 3 cut(s) 525, 1124, 1597
RseI CAYNNNNRTG 1 cut(s) 783
SacI GAGCTC 1 cut(s) 1104
SacII CCGCGG 1 cut(s) 1093
SalI GTCGAC 1 cut(s) 434
SaqAI TTAA 5 cut(s) 611, 741, 995, 1317, 1398
SatI GCNGC 3 cut(s) 747, 1683, 1686
Sau3AI GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
Sau96I GGNCC 4 cut(s) 171, 405, 621, 1475
ScaI AGTACT 1 cut(s) 1125
SchI GAGTC 4 cut(s) 179, 389, 441, 1742
ScrFI CCNGG 6 cut(s) 466, 481, 971, 1167, 1226, 1479
SduI GDGCHC 4 cut(s) 95, 480, 1089, 1104
SexAI ACCWGGT 1 cut(s) 969
SfaNI GCATC 1 cut(s) 1428
SfcI CTRYAG 2 cut(s) 1077, 1683
Sfr303I CCGCGG 1 cut(s) 1093
SfuI TTCGAA 1 cut(s) 680
SgrAI CRCCGGYG 1 cut(s) 47
SgrBI CCGCGG 1 cut(s) 1093
SinI GGWCC 4 cut(s) 171, 405, 621, 1475
SmiMI CAYNNNNRTG 1 cut(s) 783
SmlI CTYRAG 5 cut(s) 166, 189, 610, 1031, 1571
SmoI CTYRAG 5 cut(s) 166, 189, 610, 1031, 1571
Sse9I AATT 9 cut(s) 682, 769, 807, 891, 992, 996, 1430, 1538, 1628
SsiI CCGC 9 cut(s) 5, 252, 272, 352, 454, 705, 1090, 1092, 1758
SspI AATATT 1 cut(s) 199
SspMI CTAG 6 cut(s) 275, 330, 579, 935, 1053, 1179
SstI GAGCTC 1 cut(s) 1104
StyD4I CCNGG 6 cut(s) 464, 479, 969, 1165, 1224, 1477
StyI CCWWGG 1 cut(s) 1041
TaaI ACNGT 4 cut(s) 342, 853, 1391, 1514
TaiI ACGT 2 cut(s) 874, 1210
TaqI TCGA 6 cut(s) 183, 296, 435, 680, 856, 1736
TaqII GACCGA 1 cut(s) 362
TasI AATT 9 cut(s) 682, 769, 807, 891, 992, 996, 1430, 1538, 1628
TatI WGTACW 3 cut(s) 524, 1123, 1596
TfiI GAWTC 6 cut(s) 242, 293, 326, 886, 1110, 1495
Tru1I TTAA 5 cut(s) 611, 741, 995, 1317, 1398
Tru9I TTAA 5 cut(s) 611, 741, 995, 1317, 1398
TscAI CASTG 4 cut(s) 322, 445, 1477, 1519
TseI GCWGC 3 cut(s) 746, 1682, 1685
TspDTI ATGAA 8 cut(s) 54, 528, 776, 800, 861, 1391, 1416, 1764
TspGWI ACGGA 5 cut(s) 103, 254, 448, 481, 708
TspRI CASTG 4 cut(s) 322, 445, 1477, 1519
Tth111I GACNNNGTC 2 cut(s) 409, 619
Van91I CCANNNNNTGG 1 cut(s) 1533
Vha464I CTTAAG 1 cut(s) 610
VpaK11BI GGWCC 4 cut(s) 171, 405, 621, 1475
VspI ATTAAT 2 cut(s) 995, 1317
XapI RAATTY 1 cut(s) 1538
XbaI TCTAGA 1 cut(s) 329
XceI RCATGY 2 cut(s) 656, 664
XmiI GTMKAC 2 cut(s) 236, 435
XmnI GAANNNNTTC 2 cut(s) 852, 1125
XspI CTAG 6 cut(s) 275, 330, 579, 935, 1053, 1179
ZrmI AGTACT 1 cut(s) 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.