Rh1DG119500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0016381
Physical Location & Seq
Reverse (-)
21795502 .. 21801544
6043 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG119500.1

Sequence Viewer

Length: 1452 bp
ATGTACACATGTAAATGGTTCGATATAACCAAACCCCAAAGTCCAACCAAACATCATAGCACAGCTGAATTGGACACCAAATCCCTGTTTCTTCTTTTTGGGTCTTCCTCAGACCCTGTAAATTTTCTCCTTCATTTCCTTCCAATTTTGACTTTCATTTCTAGATATTGGATAGAGAATGCAACTGTAACAAGAAGAGGAAGAAGCAGAGATAGAATGGCGGTCTCGGCTTTCAAATCCTCCACCAGAAGAAGCAATCCCACCGGTGCCTCAACTTCATCATCATCATCATCATCATCATCAGCTCTTTCTAAACGGAGCACCGACCTAGATACTAGTTCAACCAAGAAACCAAACCCACCAATCAGAAGATCCAGAAGTGTCAGCGCTTTCTCCAGAAGTGTCAGCACTCTCGACTCTCAAGATAATATTTTCTTGAACAAGAGAGACAACCCTCTCTTCTGGTCTACGGATTCCCCAACCGCTGTTGACCCCAAAAGCCCGCTAGTCAAACCCGACAAAGATTCGAGGCCGGCAACCTCGTCCAGTGTTGCTGATTCTAGAAGGGGACGGTCGGTGTCGCGGAACGCCGATGTTTTGGTCGGTCGGAGCCAGTCCAGAGTTGACTCGGGTCGGAGCCTGTCCAGAGTCGACACTGGCCGTCGCAACCGCTCCGTTTCCCGGTGTCCGGAGCCCAGGGGGCGTTCCGTCATTTCCAAGAGTGAAGATGAACAAGAATGTACTTCTACATTGAATAAAGGGGAGGAAGGCAAAAAGGTTGGGTTAGTTAGAACTAGCTCTGATGAGTTGGATCAGTTGAAAGGCTTAAGGACATGGTCCAGTCAGCATTCGCCTTTCCAGCCTTCACATGCAAACTTGTCCAGCTTGCAATCTTCGAATTGGGAAGACGGAGTTTCCACCGCAAGTTCCTTATCTGGAGCCGAAGAGAAAACTTTTAAAGCAGCTTGTGAACAGATGAATATGAATTATGGACATTCTGGTGATGATTTGTCAGTTCAAGCAGTTCATTTGGAAAATGATACCACAAGCAGCAATATATATGAAACAGTTCGATCTGAAGTGAGACGTGCTATCTCTGAGATTCAAATTGACCTTGAAAGTGCTATGCGAAGGGGCAATACTCCGGCACTGGCAACTTCTGACGTTTCTGATATCCCTCCTGACCTGGTAAATCCAAGTGCAGTTGAATTAGTTTTGGACATCAGAAGAGAATATGCCAAAAAACTTGAGCAGTCCAAGGAACGGGCTAGCAAACTTCAATCAGATCTGGCTGTTGAGGAGCACCGTGGACAAGAGCTCAGCAGAATCCTGAAGGAAGTACTTCCAGATCCCAAGATATCTAATGCGCCAAAATCTCGTCCTGGAAGAAAAGTAGGAATTTTTTTCTTCTCCTTCAATTCCCTCCTGGTAGTTTGGTTAATTTCCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

483

Amino Acids

53.41

Weight (kDa)

9.57

Isoelectric Point (pI)

69.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 266
AccBSI CCGCTC 1 cut(s) 672
AccI GTMKAC 2 cut(s) 467, 651
AccII CGCG 1 cut(s) 583
AccIII TCCGGA 1 cut(s) 688
AciI CCGC 6 cut(s) 221, 483, 503, 583, 670, 921
AclWI GGATC 3 cut(s) 366, 819, 1343
AcoI YGGCCR 1 cut(s) 658
AcsI RAATTY 2 cut(s) 121, 1398
AcuI CTGAAG 2 cut(s) 1098, 1352
AfaI GTAC 3 cut(s) 5, 742, 1341
AfeI AGCGCT 1 cut(s) 388
AfiI CCNNNNNNNGG 3 cut(s) 681, 688, 1263
AflII CTTAAG 1 cut(s) 826
AflIII ACRYGT 1 cut(s) 8
AgeI ACCGGT 1 cut(s) 263
AhlI ACTAGT 1 cut(s) 335
AjiI CACGTC 1 cut(s) 1088
AjnI CCWGG 4 cut(s) 695, 1185, 1381, 1425
AluBI AGCT 6 cut(s) 65, 305, 798, 885, 965, 1318
AluI AGCT 6 cut(s) 65, 305, 798, 885, 965, 1318
Alw21I GWGCWC 3 cut(s) 323, 1305, 1320
Alw26I GTCTC 3 cut(s) 229, 441, 1078
AlwI GGATC 3 cut(s) 366, 819, 1343
AlwNI CAGNNNCTG 1 cut(s) 116
Ama87I CYCGRG 1 cut(s) 628
Aor13HI TCCGGA 1 cut(s) 688
Aor51HI AGCGCT 1 cut(s) 388
AoxI GGCC 2 cut(s) 530, 658
ApeKI GCWGC 2 cut(s) 962, 1050
ApoI RAATTY 2 cut(s) 121, 1398
AsiGI ACCGGT 1 cut(s) 263
Asp700I GAANNNNTTC 2 cut(s) 1068, 1341
AspLEI GCGC 2 cut(s) 389, 1369
AspS9I GGNCC 1 cut(s) 837
AsuC2I CCSGG 1 cut(s) 682
AsuHPI GGTGA 1 cut(s) 1013
AsuII TTCGAA 1 cut(s) 896
AsuNHI GCTAGC 1 cut(s) 1268
AvaI CYCGRG 1 cut(s) 628
AvaII GGWCC 1 cut(s) 837
BanI GGYRCC 1 cut(s) 266
BanII GRGCYC 2 cut(s) 696, 1320
BarI GAAGNNNNNNTAC 2 cut(s) 1123, 1155
BbsI GAAGAC 2 cut(s) 96, 912
Bbv12I GWGCWC 3 cut(s) 323, 1305, 1320
BbvI GCAGC 2 cut(s) 974, 1062
BceAI ACGGC 1 cut(s) 645
BciT130I CCWGG 4 cut(s) 697, 1187, 1383, 1427
BcnI CCSGG 1 cut(s) 682
BcoDI GTCTC 3 cut(s) 229, 441, 1078
BcuI ACTAGT 1 cut(s) 335
BfaI CTAG 7 cut(s) 162, 329, 336, 506, 561, 795, 1269
BfoI RGCGCY 1 cut(s) 390
BfrI CTTAAG 1 cut(s) 826
BglI GCCNNNNNGGC 1 cut(s) 700
BglII AGATCT 1 cut(s) 1285
BisI GCNGC 2 cut(s) 963, 1051
BlpI GCTNAGC 1 cut(s) 1319
BlsI GCNGC 2 cut(s) 964, 1052
BmcAI AGTACT 1 cut(s) 1341
Bme1390I CCNGG 5 cut(s) 682, 697, 1187, 1383, 1427
Bme18I GGWCC 1 cut(s) 837
BmeT110I CYCGRG 1 cut(s) 628
BmgBI CACGTC 1 cut(s) 1088
BmgT120I GGNCC 1 cut(s) 837
BmiI GGNNCC 5 cut(s) 268, 611, 638, 693, 940
BmrFI CCNGG 5 cut(s) 682, 697, 1187, 1383, 1427
BmtI GCTAGC 1 cut(s) 1272
BoxI GACNNNNGTC 1 cut(s) 630
BpiI GAAGAC 2 cut(s) 96, 912
BpmI CTGGAG 2 cut(s) 379, 957
Bpu1102I GCTNAGC 1 cut(s) 1319
Bpu14I TTCGAA 1 cut(s) 896
BpuEI CTTGAG 2 cut(s) 405, 1268
BpuMI CCSGG 1 cut(s) 682
BsaI GGTCTC 1 cut(s) 229
BsaJI CCNNGG 4 cut(s) 695, 696, 1257, 1306
BsaWI WCCGGW 2 cut(s) 263, 688
Bsc4I CCNNNNNNNGG 3 cut(s) 681, 688, 1263
Bse118I RCCGGY 2 cut(s) 263, 532
Bse1I ACTGG 5 cut(s) 546, 613, 661, 840, 1155
BseAI TCCGGA 1 cut(s) 688
BseBI CCWGG 4 cut(s) 697, 1187, 1383, 1427
BseDI CCNNGG 4 cut(s) 695, 696, 1257, 1306
BseLI CCNNNNNNNGG 3 cut(s) 681, 688, 1263
BseMII CTCAG 3 cut(s) 123, 1089, 1333
BseNI ACTGG 5 cut(s) 546, 613, 661, 840, 1155
BseRI GAGGAG 1 cut(s) 1313
BseXI GCAGC 2 cut(s) 974, 1062
BsgI GTGCAG 1 cut(s) 1221
Bsh1236I CGCG 1 cut(s) 583
Bsh1285I CGRYCG 2 cut(s) 575, 607
BshFI GGCC 2 cut(s) 532, 660
BshNI GGYRCC 1 cut(s) 266
BshTI ACCGGT 1 cut(s) 263
BsiEI CGRYCG 2 cut(s) 575, 607
BsiHKAI GWGCWC 3 cut(s) 323, 1305, 1320
BsiHKCI CYCGRG 1 cut(s) 628
BsiSI CCGG 5 cut(s) 264, 533, 682, 689, 1145
BslFI GGGAC 1 cut(s) 582
BslI CCNNNNNNNGG 3 cut(s) 681, 688, 1263
BsmAI GTCTC 3 cut(s) 229, 441, 1078
BsmBI CGTCTC 1 cut(s) 1078
BsmFI GGGAC 1 cut(s) 582
BsmI GAATGC 2 cut(s) 184, 847
BsnI GGCC 2 cut(s) 532, 660
Bso31I GGTCTC 1 cut(s) 229
BsoBI CYCGRG 1 cut(s) 628
Bsp119I TTCGAA 1 cut(s) 896
Bsp1286I GDGCHC 4 cut(s) 323, 696, 1305, 1320
Bsp13I TCCGGA 1 cut(s) 688
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 5 cut(s) 371, 811, 1073, 1285, 1348
Bsp1720I GCTNAGC 1 cut(s) 1319
BspACI CCGC 6 cut(s) 221, 483, 503, 583, 670, 921
BspANI GGCC 2 cut(s) 532, 660
BspCNI CTCAG 3 cut(s) 122, 1090, 1332
BspEI TCCGGA 1 cut(s) 688
BspFNI CGCG 1 cut(s) 583
BspLI GGNNCC 5 cut(s) 268, 611, 638, 693, 940
BspOI GCTAGC 1 cut(s) 1272
BspPI GGATC 3 cut(s) 366, 819, 1343
BspT104I TTCGAA 1 cut(s) 896
BspT107I GGYRCC 1 cut(s) 266
BspTI CTTAAG 1 cut(s) 826
BspTNI GGTCTC 1 cut(s) 229
BsrBI CCGCTC 1 cut(s) 672
BsrFI RCCGGY 2 cut(s) 263, 532
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 5 cut(s) 546, 613, 661, 840, 1155
BssAI RCCGGY 2 cut(s) 263, 532
BssECI CCNNGG 4 cut(s) 695, 696, 1257, 1306
BssMI GATC 5 cut(s) 371, 811, 1073, 1285, 1348
BssT1I CCWWGG 1 cut(s) 1257
Bst2UI CCWGG 4 cut(s) 697, 1187, 1383, 1427
Bst4CI ACNGT 4 cut(s) 187, 573, 1069, 1307
Bst6I CTCTTC 4 cut(s) 190, 464, 939, 1222
BstAFI CTTAAG 1 cut(s) 826
BstAUI TGTACA 1 cut(s) 3
BstBI TTCGAA 1 cut(s) 896
BstC8I GCNNGC 4 cut(s) 503, 534, 887, 1270
BstDEI CTNAG 3 cut(s) 109, 1098, 1319
BstDSI CCRYGG 1 cut(s) 1306
BstFNI CGCG 1 cut(s) 583
BstH2I RGCGCY 1 cut(s) 390
BstHHI GCGC 2 cut(s) 389, 1369
BstKTI GATC 5 cut(s) 374, 814, 1076, 1288, 1351
BstMAI GTCTC 3 cut(s) 229, 441, 1078
BstMBI GATC 5 cut(s) 371, 811, 1073, 1285, 1348
BstMCI CGRYCG 2 cut(s) 575, 607
BstMWI GCNNNNNNNGC 3 cut(s) 227, 700, 859
BstNI CCWGG 4 cut(s) 697, 1187, 1383, 1427
BstNSI RCATGY 2 cut(s) 12, 872
BstPAI GACNNNNGTC 1 cut(s) 630
BstSCI CCNGG 5 cut(s) 680, 695, 1185, 1381, 1425
BstUI CGCG 1 cut(s) 583
BstV1I GCAGC 2 cut(s) 974, 1062
BstV2I GAAGAC 2 cut(s) 96, 912
BstX2I RGATCY 3 cut(s) 371, 1285, 1348
BstYI RGATCY 3 cut(s) 371, 1285, 1348
BsuRI GGCC 2 cut(s) 532, 660
BtgI CCRYGG 1 cut(s) 1306
BtrI CACGTC 1 cut(s) 1088
BtsIMutI CAGTG 3 cut(s) 553, 654, 1148
Cac8I GCNNGC 4 cut(s) 503, 534, 887, 1270
CaiI CAGNNNCTG 1 cut(s) 116
CfoI GCGC 2 cut(s) 389, 1369
Cfr10I RCCGGY 2 cut(s) 263, 532
Cfr13I GGNCC 1 cut(s) 837
CsiI ACCWGGT 1 cut(s) 1185
Csp6I GTAC 3 cut(s) 4, 741, 1340
CspAI ACCGGT 1 cut(s) 263
CviAII CATG 3 cut(s) 9, 834, 869
CviQI GTAC 3 cut(s) 4, 741, 1340
DdeI CTNAG 3 cut(s) 109, 1098, 1319
DpnI GATC 5 cut(s) 373, 813, 1075, 1287, 1350
DpnII GATC 5 cut(s) 371, 811, 1073, 1285, 1348
DraI TTTAAA 1 cut(s) 958
EaeI YGGCCR 1 cut(s) 658
Eam1104I CTCTTC 4 cut(s) 190, 464, 939, 1222
EarI CTCTTC 4 cut(s) 190, 464, 939, 1222
Ecl136II GAGCTC 1 cut(s) 1318
Eco130I CCWWGG 1 cut(s) 1257
Eco24I GRGCYC 2 cut(s) 696, 1320
Eco31I GGTCTC 1 cut(s) 229
Eco32I GATATC 2 cut(s) 1174, 1359
Eco47I GGWCC 1 cut(s) 837
Eco47III AGCGCT 1 cut(s) 388
Eco53kI GAGCTC 1 cut(s) 1318
Eco57I CTGAAG 2 cut(s) 1098, 1352
Eco88I CYCGRG 1 cut(s) 628
EcoICRI GAGCTC 1 cut(s) 1318
EcoRII CCWGG 4 cut(s) 695, 1185, 1381, 1425
EcoRV GATATC 2 cut(s) 1174, 1359
EcoT14I CCWWGG 1 cut(s) 1257
EcoT38I GRGCYC 2 cut(s) 696, 1320
ErhI CCWWGG 1 cut(s) 1257
Esp3I CGTCTC 1 cut(s) 1078
FaeI CATG 3 cut(s) 12, 837, 872
FaqI GGGAC 1 cut(s) 582
FatI CATG 3 cut(s) 8, 833, 868
FauI CCCGC 1 cut(s) 510
FblI GTMKAC 2 cut(s) 467, 651
Fnu4HI GCNGC 2 cut(s) 963, 1051
FriOI GRGCYC 2 cut(s) 696, 1320
Fsp4HI GCNGC 2 cut(s) 963, 1051
FspBI CTAG 7 cut(s) 162, 329, 336, 506, 561, 795, 1269
GlaI GCGC 2 cut(s) 388, 1368
GluI GCNGC 2 cut(s) 963, 1051
GsuI CTGGAG 2 cut(s) 379, 957
HaeII RGCGCY 1 cut(s) 390
HaeIII GGCC 2 cut(s) 532, 660
HapII CCGG 5 cut(s) 264, 533, 682, 689, 1145
HhaI GCGC 2 cut(s) 389, 1369
Hin1II CATG 3 cut(s) 12, 837, 872
Hin6I GCGC 2 cut(s) 387, 1367
HinP1I GCGC 2 cut(s) 387, 1367
HincII GTYRAC 3 cut(s) 490, 625, 652
HindII GTYRAC 3 cut(s) 490, 625, 652
HinfI GANTC 8 cut(s) 416, 473, 524, 557, 626, 648, 1102, 1326
HpaII CCGG 5 cut(s) 264, 533, 682, 689, 1145
HphI GGTGA 1 cut(s) 1013
Hpy166II GTNNAC 7 cut(s) 6, 468, 490, 625, 652, 971, 1310
Hpy8I GTNNAC 7 cut(s) 6, 468, 490, 625, 652, 971, 1310
Hpy99I CGWCG 1 cut(s) 666
HpyAV CCTTC 8 cut(s) 140, 149, 558, 761, 873, 1125, 1327, 1423
HpyCH4III ACNGT 4 cut(s) 187, 573, 1069, 1307
HpyCH4IV ACGT 2 cut(s) 1087, 1164
HpyCH4V TGCA 4 cut(s) 182, 872, 889, 1202
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 700, 859
HpyF3I CTNAG 3 cut(s) 109, 1098, 1319
HpySE526I ACGT 2 cut(s) 1087, 1164
Hsp92II CATG 3 cut(s) 12, 837, 872
HspAI GCGC 2 cut(s) 387, 1367
Kpn2I TCCGGA 1 cut(s) 688
KroI GCCGGC 1 cut(s) 532
KroNI GCCGGC 1 cut(s) 534
Kzo9I GATC 5 cut(s) 371, 811, 1073, 1285, 1348
LmnI GCTCC 7 cut(s) 318, 609, 636, 677, 691, 938, 1300
Lsp1109I GCAGC 2 cut(s) 974, 1062
MabI ACCWGGT 1 cut(s) 1185
MaeI CTAG 7 cut(s) 162, 329, 336, 506, 561, 795, 1269
MaeII ACGT 2 cut(s) 1087, 1164
MaeIII GTNAC 1 cut(s) 187
MalI GATC 5 cut(s) 373, 813, 1075, 1287, 1350
MbiI CCGCTC 1 cut(s) 672
MboI GATC 5 cut(s) 371, 811, 1073, 1285, 1348
MflI RGATCY 3 cut(s) 371, 1285, 1348
MhlI GDGCHC 4 cut(s) 323, 696, 1305, 1320
MlyI GAGTC 3 cut(s) 410, 620, 657
MmeI TCCRAC 4 cut(s) 68, 587, 614, 789
MroI TCCGGA 1 cut(s) 688
MroNI GCCGGC 1 cut(s) 532
MroXI GAANNNNTTC 2 cut(s) 1068, 1341
MseI TTAA 3 cut(s) 827, 957, 1439
MslI CAYNNNNRTG 2 cut(s) 13, 999
MspA1I CMGCKG 2 cut(s) 65, 485
MspCI CTTAAG 1 cut(s) 826
MspI CCGG 5 cut(s) 264, 533, 682, 689, 1145
MspR9I CCNGG 5 cut(s) 682, 697, 1187, 1383, 1427
Mva1269I GAATGC 2 cut(s) 184, 847
MvaI CCWGG 4 cut(s) 697, 1187, 1383, 1427
MvnI CGCG 1 cut(s) 583
MwoI GCNNNNNNNGC 3 cut(s) 227, 700, 859
NaeI GCCGGC 1 cut(s) 534
NciI CCSGG 1 cut(s) 682
NdeII GATC 5 cut(s) 371, 811, 1073, 1285, 1348
NgoMIV GCCGGC 1 cut(s) 532
NheI GCTAGC 1 cut(s) 1268
NlaIII CATG 3 cut(s) 12, 837, 872
NlaIV GGNNCC 5 cut(s) 268, 611, 638, 693, 940
NmeAIII GCCGAG 1 cut(s) 206
NspI RCATGY 2 cut(s) 12, 872
NspV TTCGAA 1 cut(s) 896
PasI CCCWGGG 1 cut(s) 696
PciI ACATGT 1 cut(s) 8
PctI GAATGC 2 cut(s) 184, 847
PdiI GCCGGC 1 cut(s) 534
PdmI GAANNNNTTC 2 cut(s) 1068, 1341
PfeI GAWTC 5 cut(s) 473, 524, 557, 1102, 1326
PflFI GACNNNGTC 1 cut(s) 835
PfoI TCCNGGA 1 cut(s) 1381
PinAI ACCGGT 1 cut(s) 263
PkrI GCNGC 2 cut(s) 964, 1052
PleI GAGTC 3 cut(s) 410, 620, 656
PpsI GAGTC 3 cut(s) 410, 620, 656
PscI ACATGT 1 cut(s) 8
PshAI GACNNNNGTC 1 cut(s) 630
Psp124BI GAGCTC 1 cut(s) 1320
Psp6I CCWGG 4 cut(s) 695, 1185, 1381, 1425
PspGI CCWGG 4 cut(s) 695, 1185, 1381, 1425
PspN4I GGNNCC 5 cut(s) 268, 611, 638, 693, 940
PspPI GGNCC 1 cut(s) 837
PstNI CAGNNNCTG 1 cut(s) 116
PsuI RGATCY 3 cut(s) 371, 1285, 1348
PsyI GACNNNGTC 1 cut(s) 835
PvuII CAGCTG 1 cut(s) 65
RsaI GTAC 3 cut(s) 5, 742, 1341
RsaNI GTAC 3 cut(s) 4, 741, 1340
RseI CAYNNNNRTG 2 cut(s) 13, 999
SacI GAGCTC 1 cut(s) 1320
SalI GTCGAC 1 cut(s) 650
SaqAI TTAA 3 cut(s) 827, 957, 1439
SatI GCNGC 2 cut(s) 963, 1051
Sau3AI GATC 5 cut(s) 371, 811, 1073, 1285, 1348
Sau96I GGNCC 1 cut(s) 837
ScaI AGTACT 1 cut(s) 1341
SchI GAGTC 3 cut(s) 410, 620, 657
ScrFI CCNGG 5 cut(s) 682, 697, 1187, 1383, 1427
SduI GDGCHC 4 cut(s) 323, 696, 1305, 1320
SexAI ACCWGGT 1 cut(s) 1185
SfuI TTCGAA 1 cut(s) 896
SgrAI CRCCGGYG 1 cut(s) 263
SinI GGWCC 1 cut(s) 837
SmiMI CAYNNNNRTG 2 cut(s) 13, 999
SmlI CTYRAG 3 cut(s) 420, 826, 1247
SmoI CTYRAG 3 cut(s) 420, 826, 1247
SpeI ACTAGT 1 cut(s) 335
SsiI CCGC 6 cut(s) 221, 483, 503, 583, 670, 921
SspI AATATT 1 cut(s) 430
SspMI CTAG 7 cut(s) 162, 329, 336, 506, 561, 795, 1269
SstI GAGCTC 1 cut(s) 1320
StyD4I CCNGG 5 cut(s) 680, 695, 1185, 1381, 1425
StyI CCWWGG 1 cut(s) 1257
TaaI ACNGT 4 cut(s) 187, 573, 1069, 1307
TaiI ACGT 2 cut(s) 1090, 1167
TaqI TCGA 6 cut(s) 21, 414, 527, 651, 896, 1072
TaqII GACCGA 1 cut(s) 593
TatI WGTACW 3 cut(s) 3, 740, 1339
TfiI GAWTC 5 cut(s) 473, 524, 557, 1102, 1326
Tru1I TTAA 3 cut(s) 827, 957, 1439
Tru9I TTAA 3 cut(s) 827, 957, 1439
TscAI CASTG 3 cut(s) 553, 661, 1155
TseI GCWGC 2 cut(s) 962, 1050
TspDTI ATGAA 8 cut(s) 122, 145, 267, 744, 992, 998, 1016, 1077
TspGWI ACGGA 5 cut(s) 331, 485, 664, 697, 924
TspRI CASTG 3 cut(s) 553, 661, 1155
Tth111I GACNNNGTC 1 cut(s) 835
Vha464I CTTAAG 1 cut(s) 826
VpaK11BI GGWCC 1 cut(s) 837
XapI RAATTY 2 cut(s) 121, 1398
XbaI TCTAGA 2 cut(s) 161, 560
XceI RCATGY 2 cut(s) 12, 872
XmiI GTMKAC 2 cut(s) 467, 651
XmnI GAANNNNTTC 2 cut(s) 1068, 1341
XspI CTAG 7 cut(s) 162, 329, 336, 506, 561, 795, 1269
ZrmI AGTACT 1 cut(s) 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.