Rroxscaffold_4G00319310

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0016381
Physical Location & Seq
Forward (+)
47007136 .. 47013116
5981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00319310.1

Sequence Viewer

Length: 1800 bp
ATGGCGGTCTCGGCTTTCAAATCCTCCACCAGAAGAAGCAATCCCGCCGGTGCCTCAACTTCATCATCATCAGCTATTTCTAAACGGAGCACCGATATAGATACTAGTTCAACCAAGAAACCAAACCCACCAATCAGAAGATCCAGAAGTGTCTCCGCTTTCTCAAGGACCACCACTCTCGACTCTCAAGATAATATTTTCTTGAACAAGAGAGACAACCCTCTCTTCTGGTCTACGGATTCCCCAACCGCTGTTGACCCCAAAACCCCGCTAGTCAAACCCGACAAAGATTCGAGCCCGGCAACCTCGTCCAGTGTTGCTGATTCTAGAAGGGGACGGTCGGTGTCGCGGAACGCCGATGTTTTGGTCGGTCGGAGCCAGTCCAGAGTTGACTCGGGTCGGACCTCGTCGGCTCGGAGCCTGTCCAGAGTCGACACTGGCCGTCGCAACCGCTCCGTTTCCCGGTGTCCGGAGCCCAGGGGGCGTTCCGTCATTTCCAAGAGTGAAGATGAACAAGAATGTACTTCTTCATTGAATAAAGGGGAGGAAGGCAAAAAGGGTGGTTTAGTTAGAACTAGCTCTGATGAGTTGGATCAGTTGAAAGGCTTAAGGACATGGTCCAGTCAGCATTCTCCTTTCCATCCTTCACATGCAAACTTGTCCAGCTTGCAATCTTCGAATTGGGAAGAAGGAGTTTCCACCGCAAGTTCCTTATCTGGAGCCGAAGAGAAAACTTTTAAAGCAGCTTGTGAACAGATGAATATAAATTATGGACATTCCAGTGATGATTTGTCGGTTCAAGCAATTCATTTGGAAGATGATACCACAAGTAGTAATATATATGAAACAGTTCGATCTGAAGTGAGACGTGCTATCTCTGAGATTCAAATTGACCTTGAAAGTGCTATGCGAAGGGGCAATACTCCGGCACTAGCAACTTCTGACATTTCTGATATCCCTCCCGACCTGGTAAATCCAAGTGCAGTTGAATTAGTATTGGACATCAGAAGAGAATATGCCAAAAAACTTGAGCAGTCCAAGGAACGGGCTAGCAAACTTCAATCAGATCTGGCTGTTGAGGAGCACCGTGGACAAGAGCTCAGCAGAATCCTGAAGGAAGTACTTCCAGATCCCAAGATATCTAATGCGCCAAAATCTCGTCCTGGAAGAAAAGCTAGCATTGAAAGAAGAAAGATGTCAAAACGTCTAACAGAAGAAGCTCTGGCCTATTTTGATGAGTGTGTATCCCTGTCAACTTTTGATAGTTCTGACTTTTCATCGCCAGAGGATCCACCTTTCAACTTAGTTGGTATTAATACCCCTGTTGTTAAAAGTCTATCTTTACTCCAAGAAGGTTCAAGTGCTTCAGTCATGAATAGCTCGAACCGTAGCCTCAATGAAAAACAGGCATTGAGCATCCAAAGTCAATTTTCCAATGCCCACAATCCTTCAGGACTAATGGCCAGGAGTGGTCCTGGGGAGCCAACCTTGAATCAGATTAGTCCTAACAGTGCCAACAGAGCCAAAGATTGGAAATTCTCATTTGCTCATAAGCCAGCTGAAACCCTTGAGCTTCAACAAGACATTAGGAAGTACATCAGACATTTTGAGAAAGATGACATGGAATTGCAGAGTGTAAGATCCATCTCTTGTGATTTGGGTGAGTATAGCTTGCAGGCTGCAGCACAAAGTTATATGTTTGACAGGGTTTTATTTAAAAATAGAATAGAGTCGAGGGGTATTTTACTCTGTGGCGGTGGTATGTCAAGTTCATTTTCTCCATTTGCTTCTTTTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

599

Amino Acids

65.77

Weight (kDa)

8.83

Isoelectric Point (pI)

77.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1530
AccBSI CCGCTC 1 cut(s) 453
AccI GTMKAC 2 cut(s) 233, 432
AccII CGCG 1 cut(s) 349
AccIII TCCGGA 1 cut(s) 469
AciI CCGC 9 cut(s) 5, 45, 156, 249, 269, 349, 451, 702, 1755
AclWI GGATC 6 cut(s) 135, 600, 1124, 1283, 1296, 1635
AcoI YGGCCR 2 cut(s) 439, 1461
AcsI RAATTY 1 cut(s) 1535
AcuI CTGAAG 4 cut(s) 879, 1133, 1350, 1434
AfaI GTAC 3 cut(s) 523, 1122, 1595
AfiI CCNNNNNNNGG 4 cut(s) 462, 469, 1044, 1530
AflII CTTAAG 1 cut(s) 607
AhlI ACTAGT 1 cut(s) 104
AjiI CACGTC 1 cut(s) 869
AjnI CCWGG 5 cut(s) 476, 966, 1162, 1463, 1474
Alw21I GWGCWC 3 cut(s) 92, 1086, 1101
Alw26I GTCTC 4 cut(s) 13, 157, 207, 859
AlwI GGATC 6 cut(s) 135, 600, 1124, 1283, 1296, 1635
Ama87I CYCGRG 1 cut(s) 394
Aor13HI TCCGGA 1 cut(s) 469
AoxI GGCC 3 cut(s) 439, 1224, 1461
ApeKI GCWGC 3 cut(s) 743, 1679, 1682
ApoI RAATTY 1 cut(s) 1535
AseI ATTAAT 1 cut(s) 1314
Asp700I GAANNNNTTC 2 cut(s) 849, 1122
AspLEI GCGC 1 cut(s) 1150
AspS9I GGNCC 4 cut(s) 168, 402, 618, 1472
AsuC2I CCSGG 2 cut(s) 299, 463
AsuHPI GGTGA 1 cut(s) 1673
AsuII TTCGAA 1 cut(s) 677
AsuNHI GCTAGC 2 cut(s) 1049, 1175
AvaI CYCGRG 1 cut(s) 394
AvaII GGWCC 4 cut(s) 168, 402, 618, 1472
BalI TGGCCA 1 cut(s) 1463
BamHI GGATCC 1 cut(s) 1288
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 3 cut(s) 299, 477, 1101
BarI GAAGNNNNNNTAC 2 cut(s) 904, 936
Bbv12I GWGCWC 3 cut(s) 92, 1086, 1101
BbvI GCAGC 3 cut(s) 755, 1666, 1694
BccI CCATC 2 cut(s) 648, 1652
BceAI ACGGC 1 cut(s) 426
BciT130I CCWGG 5 cut(s) 478, 968, 1164, 1465, 1476
BciVI GTATCC 1 cut(s) 1255
BcnI CCSGG 2 cut(s) 299, 463
BcoDI GTCTC 4 cut(s) 13, 157, 207, 859
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 7 cut(s) 105, 272, 327, 576, 932, 1050, 1176
BfmI CTRYAG 1 cut(s) 1680
BfrI CTTAAG 1 cut(s) 607
BfuI GTATCC 1 cut(s) 1255
BglI GCCNNNNNGGC 1 cut(s) 481
BglII AGATCT 1 cut(s) 1066
BisI GCNGC 3 cut(s) 744, 1680, 1683
BlpI GCTNAGC 1 cut(s) 1100
BlsI GCNGC 3 cut(s) 745, 1681, 1684
BmcAI AGTACT 1 cut(s) 1122
Bme1390I CCNGG 7 cut(s) 299, 463, 478, 968, 1164, 1465, 1476
Bme18I GGWCC 4 cut(s) 168, 402, 618, 1472
BmeT110I CYCGRG 1 cut(s) 394
BmgBI CACGTC 1 cut(s) 869
BmgT120I GGNCC 4 cut(s) 168, 402, 618, 1472
BmiI GGNNCC 7 cut(s) 52, 377, 419, 474, 721, 1290, 1482
BmrFI CCNGG 7 cut(s) 299, 463, 478, 968, 1164, 1465, 1476
BmsI GCATC 1 cut(s) 1425
BmtI GCTAGC 2 cut(s) 1053, 1179
BoxI GACNNNNGTC 1 cut(s) 396
BpmI CTGGAG 1 cut(s) 738
Bpu1102I GCTNAGC 1 cut(s) 1100
Bpu14I TTCGAA 1 cut(s) 677
BpuEI CTTGAG 4 cut(s) 148, 171, 1049, 1589
BpuMI CCSGG 2 cut(s) 299, 463
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 476, 477, 1038, 1087, 1475
BsaWI WCCGGW 1 cut(s) 469
Bsc4I CCNNNNNNNGG 4 cut(s) 462, 469, 1044, 1530
Bse118I RCCGGY 1 cut(s) 47
Bse1I ACTGG 5 cut(s) 312, 379, 442, 621, 780
BseAI TCCGGA 1 cut(s) 469
BseBI CCWGG 5 cut(s) 478, 968, 1164, 1465, 1476
BseDI CCNNGG 5 cut(s) 476, 477, 1038, 1087, 1475
BseGI GGATG 2 cut(s) 640, 1416
BseLI CCNNNNNNNGG 4 cut(s) 462, 469, 1044, 1530
BseMII CTCAG 2 cut(s) 870, 1114
BseNI ACTGG 5 cut(s) 312, 379, 442, 621, 780
BseRI GAGGAG 1 cut(s) 1094
BseXI GCAGC 3 cut(s) 755, 1666, 1694
BsgI GTGCAG 1 cut(s) 1002
Bsh1236I CGCG 1 cut(s) 349
Bsh1285I CGRYCG 2 cut(s) 341, 373
BshFI GGCC 3 cut(s) 441, 1226, 1463
BshNI GGYRCC 1 cut(s) 50
BsiEI CGRYCG 2 cut(s) 341, 373
BsiHKAI GWGCWC 3 cut(s) 92, 1086, 1101
BsiHKCI CYCGRG 1 cut(s) 394
BsiSI CCGG 5 cut(s) 48, 299, 463, 470, 926
BslFI GGGAC 1 cut(s) 348
BslI CCNNNNNNNGG 4 cut(s) 462, 469, 1044, 1530
BsmAI GTCTC 4 cut(s) 13, 157, 207, 859
BsmBI CGTCTC 1 cut(s) 859
BsmFI GGGAC 1 cut(s) 348
BsmI GAATGC 1 cut(s) 628
BsnI GGCC 3 cut(s) 441, 1226, 1463
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 394
Bsp119I TTCGAA 1 cut(s) 677
Bsp1286I GDGCHC 5 cut(s) 92, 299, 477, 1086, 1101
Bsp13I TCCGGA 1 cut(s) 469
Bsp143I GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
Bsp1720I GCTNAGC 1 cut(s) 1100
BspACI CCGC 9 cut(s) 5, 45, 156, 249, 269, 349, 451, 702, 1755
BspANI GGCC 3 cut(s) 441, 1226, 1463
BspCNI CTCAG 2 cut(s) 871, 1113
BspEI TCCGGA 1 cut(s) 469
BspFNI CGCG 1 cut(s) 349
BspHI TCATGA 1 cut(s) 1371
BspLI GGNNCC 7 cut(s) 52, 377, 419, 474, 721, 1290, 1482
BspMAI CTGCAG 1 cut(s) 1684
BspOI GCTAGC 2 cut(s) 1053, 1179
BspPI GGATC 6 cut(s) 135, 600, 1124, 1283, 1296, 1635
BspT104I TTCGAA 1 cut(s) 677
BspT107I GGYRCC 1 cut(s) 50
BspTI CTTAAG 1 cut(s) 607
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 453
BsrFI RCCGGY 1 cut(s) 47
BsrI ACTGG 5 cut(s) 312, 379, 442, 621, 780
BssAI RCCGGY 1 cut(s) 47
BssECI CCNNGG 5 cut(s) 476, 477, 1038, 1087, 1475
BssMI GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
BssT1I CCWWGG 1 cut(s) 1038
Bst2UI CCWGG 5 cut(s) 478, 968, 1164, 1465, 1476
Bst4CI ACNGT 5 cut(s) 339, 850, 1088, 1388, 1511
Bst6I CTCTTC 3 cut(s) 230, 720, 1003
BstAFI CTTAAG 1 cut(s) 607
BstBI TTCGAA 1 cut(s) 677
BstC8I GCNNGC 6 cut(s) 668, 1051, 1177, 1557, 1673, 1677
BstDEI CTNAG 3 cut(s) 879, 1100, 1303
BstDSI CCRYGG 1 cut(s) 1087
BstF5I GGATG 2 cut(s) 640, 1416
BstFNI CGCG 1 cut(s) 349
BstHHI GCGC 1 cut(s) 1150
BstKTI GATC 7 cut(s) 143, 595, 857, 1069, 1132, 1291, 1643
BstMAI GTCTC 4 cut(s) 13, 157, 207, 859
BstMBI GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
BstMCI CGRYCG 2 cut(s) 341, 373
BstMWI GCNNNNNNNGC 3 cut(s) 11, 481, 1520
BstNI CCWGG 5 cut(s) 478, 968, 1164, 1465, 1476
BstNSI RCATGY 1 cut(s) 653
BstPAI GACNNNNGTC 1 cut(s) 396
BstSCI CCNGG 7 cut(s) 297, 461, 476, 966, 1162, 1463, 1474
BstSFI CTRYAG 1 cut(s) 1680
BstUI CGCG 1 cut(s) 349
BstV1I GCAGC 3 cut(s) 755, 1666, 1694
BstX2I RGATCY 5 cut(s) 140, 1066, 1129, 1288, 1640
BstYI RGATCY 5 cut(s) 140, 1066, 1129, 1288, 1640
BsuI GTATCC 1 cut(s) 1255
BsuRI GGCC 3 cut(s) 441, 1226, 1463
BtgI CCRYGG 1 cut(s) 1087
BtgZI GCGATG 1 cut(s) 1263
BtrI CACGTC 1 cut(s) 869
BtsCI GGATG 2 cut(s) 640, 1416
BtsIMutI CAGTG 4 cut(s) 319, 435, 787, 1516
Cac8I GCNNGC 6 cut(s) 668, 1051, 1177, 1557, 1673, 1677
CciI TCATGA 1 cut(s) 1371
CfoI GCGC 1 cut(s) 1150
Cfr10I RCCGGY 1 cut(s) 47
Cfr13I GGNCC 4 cut(s) 168, 402, 618, 1472
CsiI ACCWGGT 1 cut(s) 966
Csp6I GTAC 3 cut(s) 522, 1121, 1594
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CviAII CATG 4 cut(s) 615, 650, 1372, 1621
CviQI GTAC 3 cut(s) 522, 1121, 1594
DdeI CTNAG 3 cut(s) 879, 1100, 1303
DpnI GATC 7 cut(s) 142, 594, 856, 1068, 1131, 1290, 1642
DpnII GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
DraI TTTAAA 2 cut(s) 739, 1717
EaeI YGGCCR 2 cut(s) 439, 1461
Eam1104I CTCTTC 3 cut(s) 230, 720, 1003
EarI CTCTTC 3 cut(s) 230, 720, 1003
Ecl136II GAGCTC 1 cut(s) 1099
Eco130I CCWWGG 1 cut(s) 1038
Eco24I GRGCYC 3 cut(s) 299, 477, 1101
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 955, 1140
Eco47I GGWCC 4 cut(s) 168, 402, 618, 1472
Eco53kI GAGCTC 1 cut(s) 1099
Eco57I CTGAAG 4 cut(s) 879, 1133, 1350, 1434
Eco88I CYCGRG 1 cut(s) 394
EcoICRI GAGCTC 1 cut(s) 1099
EcoRII CCWGG 5 cut(s) 476, 966, 1162, 1463, 1474
EcoRV GATATC 2 cut(s) 955, 1140
EcoT14I CCWWGG 1 cut(s) 1038
EcoT38I GRGCYC 3 cut(s) 299, 477, 1101
ErhI CCWWGG 1 cut(s) 1038
Esp3I CGTCTC 1 cut(s) 859
FaeI CATG 4 cut(s) 618, 653, 1375, 1624
FalI AAGNNNNNCTT 2 cut(s) 1324, 1356
FaqI GGGAC 1 cut(s) 348
FatI CATG 4 cut(s) 614, 649, 1371, 1620
FauI CCCGC 2 cut(s) 52, 276
FblI GTMKAC 2 cut(s) 233, 432
Fnu4HI GCNGC 3 cut(s) 744, 1680, 1683
FokI GGATG 2 cut(s) 627, 1403
FriOI GRGCYC 3 cut(s) 299, 477, 1101
Fsp4HI GCNGC 3 cut(s) 744, 1680, 1683
FspBI CTAG 7 cut(s) 105, 272, 327, 576, 932, 1050, 1176
GlaI GCGC 1 cut(s) 1149
GluI GCNGC 3 cut(s) 744, 1680, 1683
GsuI CTGGAG 1 cut(s) 738
HaeIII GGCC 3 cut(s) 441, 1226, 1463
HapII CCGG 5 cut(s) 48, 299, 463, 470, 926
HhaI GCGC 1 cut(s) 1150
Hin1II CATG 4 cut(s) 618, 653, 1375, 1624
Hin6I GCGC 1 cut(s) 1148
HinP1I GCGC 1 cut(s) 1148
HincII GTYRAC 4 cut(s) 256, 391, 433, 1254
HindII GTYRAC 4 cut(s) 256, 391, 433, 1254
HpaII CCGG 5 cut(s) 48, 299, 463, 470, 926
HphI GGTGA 1 cut(s) 1673
Hpy166II GTNNAC 7 cut(s) 234, 256, 391, 433, 752, 1091, 1254
Hpy8I GTNNAC 7 cut(s) 234, 256, 391, 433, 752, 1091, 1254
Hpy99I CGWCG 2 cut(s) 412, 447
HpyAV CCTTC 8 cut(s) 324, 542, 654, 683, 906, 1108, 1346, 1458
HpyCH4III ACNGT 5 cut(s) 339, 850, 1088, 1388, 1511
HpyCH4IV ACGT 2 cut(s) 868, 1204
HpyCH4V TGCA 6 cut(s) 653, 670, 983, 1630, 1675, 1682
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 481, 1520
HpyF3I CTNAG 3 cut(s) 879, 1100, 1303
HpySE526I ACGT 2 cut(s) 868, 1204
Hsp92II CATG 4 cut(s) 618, 653, 1375, 1624
HspAI GCGC 1 cut(s) 1148
Kpn2I TCCGGA 1 cut(s) 469
Kzo9I GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
LmnI GCTCC 8 cut(s) 87, 375, 417, 458, 472, 719, 1081, 1480
Lsp1109I GCAGC 3 cut(s) 755, 1666, 1694
LweI GCATC 1 cut(s) 1425
MabI ACCWGGT 1 cut(s) 966
MaeI CTAG 7 cut(s) 105, 272, 327, 576, 932, 1050, 1176
MaeII ACGT 2 cut(s) 868, 1204
MalI GATC 7 cut(s) 142, 594, 856, 1068, 1131, 1290, 1642
MbiI CCGCTC 1 cut(s) 453
MboI GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
MflI RGATCY 5 cut(s) 140, 1066, 1129, 1288, 1640
MhlI GDGCHC 5 cut(s) 92, 299, 477, 1086, 1101
MlsI TGGCCA 1 cut(s) 1463
MluCI AATT 8 cut(s) 679, 766, 804, 888, 989, 1427, 1535, 1625
MluNI TGGCCA 1 cut(s) 1463
MlyI GAGTC 4 cut(s) 176, 386, 438, 1739
MmeI TCCRAC 3 cut(s) 353, 380, 570
Mox20I TGGCCA 1 cut(s) 1463
MroI TCCGGA 1 cut(s) 469
MroXI GAANNNNTTC 2 cut(s) 849, 1122
MscI TGGCCA 1 cut(s) 1463
MseI TTAA 5 cut(s) 608, 738, 1314, 1329, 1716
MslI CAYNNNNRTG 1 cut(s) 780
Msp20I TGGCCA 1 cut(s) 1463
MspA1I CMGCKG 2 cut(s) 251, 1559
MspCI CTTAAG 1 cut(s) 607
MspI CCGG 5 cut(s) 48, 299, 463, 470, 926
MspR9I CCNGG 7 cut(s) 299, 463, 478, 968, 1164, 1465, 1476
Mva1269I GAATGC 1 cut(s) 628
MvaI CCWGG 5 cut(s) 478, 968, 1164, 1465, 1476
MvnI CGCG 1 cut(s) 349
MwoI GCNNNNNNNGC 3 cut(s) 11, 481, 1520
NciI CCSGG 2 cut(s) 299, 463
NdeII GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
NheI GCTAGC 2 cut(s) 1049, 1175
NlaIII CATG 4 cut(s) 618, 653, 1375, 1624
NlaIV GGNNCC 7 cut(s) 52, 377, 419, 474, 721, 1290, 1482
NspI RCATGY 1 cut(s) 653
NspV TTCGAA 1 cut(s) 677
PagI TCATGA 1 cut(s) 1371
PasI CCCWGGG 1 cut(s) 477
PctI GAATGC 1 cut(s) 628
PdmI GAANNNNTTC 2 cut(s) 849, 1122
PfeI GAWTC 6 cut(s) 239, 290, 323, 883, 1107, 1492
PflFI GACNNNGTC 2 cut(s) 406, 616
PflMI CCANNNNNTGG 1 cut(s) 1530
PfoI TCCNGGA 1 cut(s) 1162
PkrI GCNGC 3 cut(s) 745, 1681, 1684
PleI GAGTC 4 cut(s) 176, 386, 437, 1738
PpsI GAGTC 4 cut(s) 176, 386, 437, 1738
PshAI GACNNNNGTC 1 cut(s) 396
PshBI ATTAAT 1 cut(s) 1314
Psp124BI GAGCTC 1 cut(s) 1101
Psp6I CCWGG 5 cut(s) 476, 966, 1162, 1463, 1474
PspGI CCWGG 5 cut(s) 476, 966, 1162, 1463, 1474
PspN4I GGNNCC 7 cut(s) 52, 377, 419, 474, 721, 1290, 1482
PspPI GGNCC 4 cut(s) 168, 402, 618, 1472
PsrI GAACNNNNNNTAC 2 cut(s) 1753, 1785
PstI CTGCAG 1 cut(s) 1684
PsuI RGATCY 5 cut(s) 140, 1066, 1129, 1288, 1640
PsyI GACNNNGTC 2 cut(s) 406, 616
PvuII CAGCTG 1 cut(s) 1559
RsaI GTAC 3 cut(s) 523, 1122, 1595
RsaNI GTAC 3 cut(s) 522, 1121, 1594
RseI CAYNNNNRTG 1 cut(s) 780
SacI GAGCTC 1 cut(s) 1101
SalI GTCGAC 1 cut(s) 431
SaqAI TTAA 5 cut(s) 608, 738, 1314, 1329, 1716
SatI GCNGC 3 cut(s) 744, 1680, 1683
Sau3AI GATC 7 cut(s) 140, 592, 854, 1066, 1129, 1288, 1640
Sau96I GGNCC 4 cut(s) 168, 402, 618, 1472
ScaI AGTACT 1 cut(s) 1122
SchI GAGTC 4 cut(s) 176, 386, 438, 1739
ScrFI CCNGG 7 cut(s) 299, 463, 478, 968, 1164, 1465, 1476
SduI GDGCHC 5 cut(s) 92, 299, 477, 1086, 1101
SexAI ACCWGGT 1 cut(s) 966
SfaNI GCATC 1 cut(s) 1425
SfcI CTRYAG 1 cut(s) 1680
SfuI TTCGAA 1 cut(s) 677
SgrAI CRCCGGYG 1 cut(s) 47
SinI GGWCC 4 cut(s) 168, 402, 618, 1472
SmiMI CAYNNNNRTG 1 cut(s) 780
SmlI CTYRAG 5 cut(s) 163, 186, 607, 1028, 1568
SmoI CTYRAG 5 cut(s) 163, 186, 607, 1028, 1568
SpeI ACTAGT 1 cut(s) 104
Sse9I AATT 8 cut(s) 679, 766, 804, 888, 989, 1427, 1535, 1625
SsiI CCGC 9 cut(s) 5, 45, 156, 249, 269, 349, 451, 702, 1755
SspI AATATT 1 cut(s) 196
SspMI CTAG 7 cut(s) 105, 272, 327, 576, 932, 1050, 1176
SstI GAGCTC 1 cut(s) 1101
StyD4I CCNGG 7 cut(s) 297, 461, 476, 966, 1162, 1463, 1474
StyI CCWWGG 1 cut(s) 1038
TaaI ACNGT 5 cut(s) 339, 850, 1088, 1388, 1511
TaiI ACGT 2 cut(s) 871, 1207
TaqI TCGA 7 cut(s) 180, 293, 432, 677, 853, 1382, 1733
TaqII GACCGA 1 cut(s) 359
TasI AATT 8 cut(s) 679, 766, 804, 888, 989, 1427, 1535, 1625
TatI WGTACW 3 cut(s) 521, 1120, 1593
TfiI GAWTC 6 cut(s) 239, 290, 323, 883, 1107, 1492
Tru1I TTAA 5 cut(s) 608, 738, 1314, 1329, 1716
Tru9I TTAA 5 cut(s) 608, 738, 1314, 1329, 1716
TscAI CASTG 4 cut(s) 319, 442, 787, 1516
TseI GCWGC 3 cut(s) 743, 1679, 1682
TspGWI ACGGA 4 cut(s) 100, 251, 445, 478
TspRI CASTG 4 cut(s) 319, 442, 787, 1516
Tth111I GACNNNGTC 2 cut(s) 406, 616
Van91I CCANNNNNTGG 1 cut(s) 1530
Vha464I CTTAAG 1 cut(s) 607
VpaK11BI GGWCC 4 cut(s) 168, 402, 618, 1472
VspI ATTAAT 1 cut(s) 1314
XapI RAATTY 1 cut(s) 1535
XbaI TCTAGA 1 cut(s) 326
XceI RCATGY 1 cut(s) 653
XmiI GTMKAC 2 cut(s) 233, 432
XmnI GAANNNNTTC 2 cut(s) 849, 1122
XspI CTAG 7 cut(s) 105, 272, 327, 576, 932, 1050, 1176
ZrmI AGTACT 1 cut(s) 1122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.