Rmu_sc0006123.1_g000009

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006123.1
OG0016381
Physical Location & Seq
Reverse (-)
53190 .. 58827
5638 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006123.1_g000009.1.cds

Sequence Viewer

Length: 1791 bp
atggcggtctcggctttcaaatcctccaccagaagaagcaatcccgccggtgcctcaacttcatcatcatcagctatttctaaacggagcaccgatatggatactagttcaaccaagaaaccaaacccaccaatcagaagatccagaagtgtcagcgctttctccagaagtgtcagcactctcgactctcaagacaatattttcttgaacaagagagacaaccctctcttctggtctacggattccccaaccgctgttgaccccaaaaccccgctagtcaaacccgacaaagattcgaggccggcaacctcgtccagtgcggccgatactagaagaaggggacggtcggtgtcgcggaacgccgatgttttggtcggtcggagccagtccagagttgactcgggtcggagcctgtccagagtcgacactggtcgtcgcaaccgctccgtttcccggtgtccggagcccagggggcgttccgtcatttccaagagtgaagatgaacaagaatgtacttctacattgaataaaggggaggaaggcaaaaagggtgggttagttagaactagctctgatgagttggatcagttgaaaggcttgaggacatggtccagtcagcattcgcctttccagccttcacatgcaaacttgtccagcttgcaatcttcgaattgggaagacggagtttccaccgcaagttccttatctggagccgaagagaaaacttttaaagcagcttgtgaacagatgaatatgaattatggacagtcgggtgatgatttgtcggttcaagcagttcatttggaaaatgataccacaagcagcaatatatatgaaacagttcgatctgaagtgagacgtgctatctctgagattcaaattgaccttgaaagtgctatgcgaaggggcaatactccggcgctggcaacttctgacgtttctgatatccctcctgacctggtaaatccaagtgcagttgaattagttttggacatcagaagagaatatgccaaaaaactggagcagtccaaggaacgggctagcaaacttcaatcagatctggctgttgaggagcaccgtggacaagagctcagcagaatcctgaaggaagtacttccagatcccaagatatctaatgcgccaaaatctcgtcctggaagaaaagctagcattgaaagaagaaagatgtcaaaacgtctaacagaagaagctttggcctattttgatgagtgtgtatccctgtcaacttttgatagttctgacttttcatcgccagaggatccacctttcaacttagttggtattaatacccctgttgataaaagtctatctttactccaagaaagttcaagtgcttcagtcatgaatagctcaaaccgtagcctcaatgaaaaacaggcattgagcatccaaagtcaatttaccaatgcccacaatccctcaggactaatggccagcagtggtcctggggagccaaccttgaatcagattagtcctaacagtgccaacagagccaaagagtggaaattctcatttgctcataagccagctgaaacccttgagcttcaacaagacattaggaagtacatcagacattttgagaaagatgacatggaattgcagagtgcaagatccatctcttgtgatttgggtgagtatcgcctgcaggctgcagcacaaagttatatgtttgacagggttttatttggaaatagaatagagtcgaggggtgttttactctgtggcggtggtatttcaagttcattttctccatttgcttcttttttctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

596

Amino Acids

65.45

Weight (kDa)

8.84

Isoelectric Point (pI)

75.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016381)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g04960 FvH4_7g05350
malus_domestica MD02G1265200.v1.1
prunus_persica Prupe.2G060300_v2.0.a1
pyrus_communis pycom02g22660
rosa_chinensis RchiOBHm_Chr1g0331161
rosa_laevigata RLG00000029749
rosa_multiflora Rmu_sc0006123.1_g000009
rosa_roxburghii Rroxscaffold_4G00319310
rosa_rugosa Rorug01G0091800
rosa_samantha Rh1AG114800 Rh1BG087500 Rh1CG110800 Rh1DG119500
rosa_wichuraiana Rw1G009300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 50
AccB7I CCANNNNNTGG 1 cut(s) 1521
AccBSI CCGCTC 1 cut(s) 444
AccI GTMKAC 2 cut(s) 236, 423
AccII CGCG 1 cut(s) 355
AccIII TCCGGA 1 cut(s) 460
AciI CCGC 9 cut(s) 5, 45, 252, 272, 320, 355, 442, 693, 1746
AclWI GGATC 6 cut(s) 135, 591, 1115, 1274, 1287, 1626
AcoI YGGCCR 2 cut(s) 321, 1452
AcsI RAATTY 1 cut(s) 1526
AcuI CTGAAG 3 cut(s) 870, 1124, 1341
AfaI GTAC 3 cut(s) 514, 1113, 1586
AfeI AGCGCT 1 cut(s) 157
AfiI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
AhlI ACTAGT 1 cut(s) 104
AjiI CACGTC 1 cut(s) 860
AjnI CCWGG 4 cut(s) 467, 957, 1153, 1465
Alw21I GWGCWC 3 cut(s) 92, 1077, 1092
Alw26I GTCTC 3 cut(s) 13, 210, 850
AlwI GGATC 6 cut(s) 135, 591, 1115, 1274, 1287, 1626
Ama87I CYCGRG 1 cut(s) 400
Aor13HI TCCGGA 1 cut(s) 460
Aor51HI AGCGCT 1 cut(s) 157
AoxI GGCC 4 cut(s) 299, 321, 1215, 1452
ApeKI GCWGC 4 cut(s) 734, 822, 1670, 1673
ApoI RAATTY 1 cut(s) 1526
AseI ATTAAT 1 cut(s) 1305
Asp700I GAANNNNTTC 2 cut(s) 840, 1113
AspLEI GCGC 3 cut(s) 158, 922, 1141
AspS9I GGNCC 2 cut(s) 609, 1463
AsuC2I CCSGG 1 cut(s) 454
AsuHPI GGTGA 2 cut(s) 785, 1664
AsuII TTCGAA 1 cut(s) 668
AsuNHI GCTAGC 2 cut(s) 1040, 1166
AvaI CYCGRG 1 cut(s) 400
AvaII GGWCC 2 cut(s) 609, 1463
AxyI CCTNAGG 1 cut(s) 1441
BalI TGGCCA 1 cut(s) 1454
BamHI GGATCC 1 cut(s) 1279
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 2 cut(s) 468, 1092
BarI GAAGNNNNNNTAC 2 cut(s) 895, 927
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 3 cut(s) 92, 1077, 1092
BbvI GCAGC 4 cut(s) 746, 834, 1657, 1685
BccI CCATC 1 cut(s) 1643
BciT130I CCWGG 4 cut(s) 469, 959, 1155, 1467
BciVI GTATCC 2 cut(s) 94, 1246
BcnI CCSGG 1 cut(s) 454
BcoDI GTCTC 3 cut(s) 13, 210, 850
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 6 cut(s) 105, 275, 330, 567, 1041, 1167
BfmI CTRYAG 2 cut(s) 1664, 1671
BfoI RGCGCY 2 cut(s) 159, 923
BfuI GTATCC 2 cut(s) 94, 1246
BglI GCCNNNNNGGC 1 cut(s) 472
BglII AGATCT 1 cut(s) 1057
BisI GCNGC 5 cut(s) 321, 735, 823, 1671, 1674
BlpI GCTNAGC 1 cut(s) 1091
BlsI GCNGC 5 cut(s) 322, 736, 824, 1672, 1675
BmcAI AGTACT 1 cut(s) 1113
Bme1390I CCNGG 5 cut(s) 454, 469, 959, 1155, 1467
Bme18I GGWCC 2 cut(s) 609, 1463
BmeT110I CYCGRG 1 cut(s) 400
BmgBI CACGTC 1 cut(s) 860
BmgT120I GGNCC 2 cut(s) 609, 1463
BmiI GGNNCC 7 cut(s) 52, 383, 410, 465, 712, 1281, 1473
BmrFI CCNGG 5 cut(s) 454, 469, 959, 1155, 1467
BmsI GCATC 1 cut(s) 1416
BmtI GCTAGC 2 cut(s) 1044, 1170
BoxI GACNNNNGTC 2 cut(s) 402, 429
BpiI GAAGAC 1 cut(s) 684
BpmI CTGGAG 3 cut(s) 148, 729, 1040
Bpu1102I GCTNAGC 1 cut(s) 1091
Bpu14I TTCGAA 1 cut(s) 668
BpuEI CTTGAG 3 cut(s) 174, 619, 1580
BpuMI CCSGG 1 cut(s) 454
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 5 cut(s) 467, 468, 1029, 1078, 1466
BsaWI WCCGGW 1 cut(s) 460
Bsc4I CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
Bse118I RCCGGY 2 cut(s) 47, 301
Bse1I ACTGG 5 cut(s) 315, 385, 433, 612, 1023
Bse21I CCTNAGG 1 cut(s) 1441
BseAI TCCGGA 1 cut(s) 460
BseBI CCWGG 4 cut(s) 469, 959, 1155, 1467
BseDI CCNNGG 5 cut(s) 467, 468, 1029, 1078, 1466
BseGI GGATG 1 cut(s) 1407
BseLI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
BseMII CTCAG 3 cut(s) 861, 1105, 1455
BseNI ACTGG 5 cut(s) 315, 385, 433, 612, 1023
BseRI GAGGAG 1 cut(s) 1085
BseX3I CGGCCG 1 cut(s) 321
BseXI GCAGC 4 cut(s) 746, 834, 1657, 1685
BsgI GTGCAG 1 cut(s) 993
Bsh1236I CGCG 1 cut(s) 355
Bsh1285I CGRYCG 3 cut(s) 324, 347, 379
BshFI GGCC 4 cut(s) 301, 323, 1217, 1454
BshNI GGYRCC 1 cut(s) 50
BsiEI CGRYCG 3 cut(s) 324, 347, 379
BsiHKAI GWGCWC 3 cut(s) 92, 1077, 1092
BsiHKCI CYCGRG 1 cut(s) 400
BsiSI CCGG 5 cut(s) 48, 302, 454, 461, 917
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 4 cut(s) 453, 460, 1035, 1521
BsmAI GTCTC 3 cut(s) 13, 210, 850
BsmBI CGTCTC 1 cut(s) 850
BsmFI GGGAC 1 cut(s) 354
BsmI GAATGC 1 cut(s) 619
BsnI GGCC 4 cut(s) 301, 323, 1217, 1454
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 400
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 4 cut(s) 92, 468, 1077, 1092
Bsp13I TCCGGA 1 cut(s) 460
Bsp143I GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
Bsp1720I GCTNAGC 1 cut(s) 1091
BspACI CCGC 9 cut(s) 5, 45, 252, 272, 320, 355, 442, 693, 1746
BspANI GGCC 4 cut(s) 301, 323, 1217, 1454
BspCNI CTCAG 3 cut(s) 862, 1104, 1454
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 1 cut(s) 355
BspHI TCATGA 1 cut(s) 1362
BspLI GGNNCC 7 cut(s) 52, 383, 410, 465, 712, 1281, 1473
BspMAI CTGCAG 2 cut(s) 1668, 1675
BspOI GCTAGC 2 cut(s) 1044, 1170
BspPI GGATC 6 cut(s) 135, 591, 1115, 1274, 1287, 1626
BspT104I TTCGAA 1 cut(s) 668
BspT107I GGYRCC 1 cut(s) 50
BspTNI GGTCTC 1 cut(s) 13
BsrBI CCGCTC 1 cut(s) 444
BsrFI RCCGGY 2 cut(s) 47, 301
BsrI ACTGG 5 cut(s) 315, 385, 433, 612, 1023
BssAI RCCGGY 2 cut(s) 47, 301
BssECI CCNNGG 5 cut(s) 467, 468, 1029, 1078, 1466
BssMI GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
BssT1I CCWWGG 1 cut(s) 1029
Bst2UI CCWGG 4 cut(s) 469, 959, 1155, 1467
Bst4CI ACNGT 6 cut(s) 345, 768, 841, 1079, 1379, 1502
Bst6I CTCTTC 3 cut(s) 233, 711, 994
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 9 cut(s) 303, 659, 924, 1042, 1168, 1456, 1548, 1664, 1668
BstDEI CTNAG 4 cut(s) 870, 1091, 1294, 1441
BstDSI CCRYGG 1 cut(s) 1078
BstF5I GGATG 1 cut(s) 1407
BstFNI CGCG 1 cut(s) 355
BstH2I RGCGCY 2 cut(s) 159, 923
BstHHI GCGC 3 cut(s) 158, 922, 1141
BstKTI GATC 7 cut(s) 143, 586, 848, 1060, 1123, 1282, 1634
BstMAI GTCTC 3 cut(s) 13, 210, 850
BstMBI GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
BstMCI CGRYCG 3 cut(s) 324, 347, 379
BstMWI GCNNNNNNNGC 4 cut(s) 11, 472, 631, 1511
BstNI CCWGG 4 cut(s) 469, 959, 1155, 1467
BstNSI RCATGY 1 cut(s) 644
BstPAI GACNNNNGTC 2 cut(s) 402, 429
BstSCI CCNGG 5 cut(s) 452, 467, 957, 1153, 1465
BstSFI CTRYAG 2 cut(s) 1664, 1671
BstUI CGCG 1 cut(s) 355
BstV1I GCAGC 4 cut(s) 746, 834, 1657, 1685
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 5 cut(s) 140, 1057, 1120, 1279, 1631
BstXI CCANNNNNNTGG 1 cut(s) 1018
BstYI RGATCY 5 cut(s) 140, 1057, 1120, 1279, 1631
BstZI CGGCCG 1 cut(s) 321
Bsu36I CCTNAGG 1 cut(s) 1441
BsuI GTATCC 2 cut(s) 94, 1246
BsuRI GGCC 4 cut(s) 301, 323, 1217, 1454
BtgI CCRYGG 1 cut(s) 1078
BtgZI GCGATG 1 cut(s) 1254
BtrI CACGTC 1 cut(s) 860
BtsCI GGATG 1 cut(s) 1407
BtsI GCAGTG 1 cut(s) 1465
BtsIMutI CAGTG 4 cut(s) 322, 426, 1465, 1507
Cac8I GCNNGC 9 cut(s) 303, 659, 924, 1042, 1168, 1456, 1548, 1664, 1668
CciI TCATGA 1 cut(s) 1362
CfoI GCGC 3 cut(s) 158, 922, 1141
Cfr10I RCCGGY 2 cut(s) 47, 301
Cfr13I GGNCC 2 cut(s) 609, 1463
CsiI ACCWGGT 1 cut(s) 957
Csp6I GTAC 3 cut(s) 513, 1112, 1585
CspCI CAANNNNNGTGG 2 cut(s) 532, 567
CviAII CATG 4 cut(s) 606, 641, 1363, 1612
CviQI GTAC 3 cut(s) 513, 1112, 1585
DdeI CTNAG 4 cut(s) 870, 1091, 1294, 1441
DpnI GATC 7 cut(s) 142, 585, 847, 1059, 1122, 1281, 1633
DpnII GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
DraI TTTAAA 1 cut(s) 730
EaeI YGGCCR 2 cut(s) 321, 1452
EagI CGGCCG 1 cut(s) 321
Eam1104I CTCTTC 3 cut(s) 233, 711, 994
EarI CTCTTC 3 cut(s) 233, 711, 994
Ecl136II GAGCTC 1 cut(s) 1090
EclXI CGGCCG 1 cut(s) 321
Eco130I CCWWGG 1 cut(s) 1029
Eco24I GRGCYC 2 cut(s) 468, 1092
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 2 cut(s) 946, 1131
Eco47I GGWCC 2 cut(s) 609, 1463
Eco47III AGCGCT 1 cut(s) 157
Eco52I CGGCCG 1 cut(s) 321
Eco53kI GAGCTC 1 cut(s) 1090
Eco57I CTGAAG 3 cut(s) 870, 1124, 1341
Eco81I CCTNAGG 1 cut(s) 1441
Eco88I CYCGRG 1 cut(s) 400
EcoICRI GAGCTC 1 cut(s) 1090
EcoRII CCWGG 4 cut(s) 467, 957, 1153, 1465
EcoRV GATATC 2 cut(s) 946, 1131
EcoT14I CCWWGG 1 cut(s) 1029
EcoT38I GRGCYC 2 cut(s) 468, 1092
ErhI CCWWGG 1 cut(s) 1029
Esp3I CGTCTC 1 cut(s) 850
FaeI CATG 4 cut(s) 609, 644, 1366, 1615
FalI AAGNNNNNCTT 2 cut(s) 1315, 1347
FaqI GGGAC 1 cut(s) 354
FatI CATG 4 cut(s) 605, 640, 1362, 1611
FauI CCCGC 2 cut(s) 52, 279
FblI GTMKAC 2 cut(s) 236, 423
Fnu4HI GCNGC 5 cut(s) 321, 735, 823, 1671, 1674
FokI GGATG 1 cut(s) 1394
FriOI GRGCYC 2 cut(s) 468, 1092
Fsp4HI GCNGC 5 cut(s) 321, 735, 823, 1671, 1674
FspBI CTAG 6 cut(s) 105, 275, 330, 567, 1041, 1167
GlaI GCGC 3 cut(s) 157, 921, 1140
GluI GCNGC 5 cut(s) 321, 735, 823, 1671, 1674
GsuI CTGGAG 3 cut(s) 148, 729, 1040
HaeII RGCGCY 2 cut(s) 159, 923
HaeIII GGCC 4 cut(s) 301, 323, 1217, 1454
HapII CCGG 5 cut(s) 48, 302, 454, 461, 917
HhaI GCGC 3 cut(s) 158, 922, 1141
Hin1II CATG 4 cut(s) 609, 644, 1366, 1615
Hin6I GCGC 3 cut(s) 156, 920, 1139
HinP1I GCGC 3 cut(s) 156, 920, 1139
HincII GTYRAC 4 cut(s) 259, 397, 424, 1245
HindII GTYRAC 4 cut(s) 259, 397, 424, 1245
HindIII AAGCTT 1 cut(s) 1209
HinfI GANTC 9 cut(s) 185, 242, 293, 398, 420, 874, 1098, 1483, 1721
HpaII CCGG 5 cut(s) 48, 302, 454, 461, 917
HphI GGTGA 2 cut(s) 785, 1664
Hpy166II GTNNAC 7 cut(s) 237, 259, 397, 424, 743, 1082, 1245
Hpy8I GTNNAC 7 cut(s) 237, 259, 397, 424, 743, 1082, 1245
Hpy99I CGWCG 1 cut(s) 438
HpyAV CCTTC 5 cut(s) 330, 533, 645, 897, 1099
HpyCH4III ACNGT 6 cut(s) 345, 768, 841, 1079, 1379, 1502
HpyCH4IV ACGT 3 cut(s) 859, 936, 1195
HpyCH4V TGCA 7 cut(s) 644, 661, 974, 1621, 1628, 1666, 1673
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 472, 631, 1511
HpyF3I CTNAG 4 cut(s) 870, 1091, 1294, 1441
HpySE526I ACGT 3 cut(s) 859, 936, 1195
Hsp92II CATG 4 cut(s) 609, 644, 1366, 1615
HspAI GCGC 3 cut(s) 156, 920, 1139
Kpn2I TCCGGA 1 cut(s) 460
KroI GCCGGC 1 cut(s) 301
KroNI GCCGGC 1 cut(s) 303
Kzo9I GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
LmnI GCTCC 9 cut(s) 87, 381, 408, 449, 463, 710, 1021, 1072, 1471
Lsp1109I GCAGC 4 cut(s) 746, 834, 1657, 1685
LweI GCATC 1 cut(s) 1416
MabI ACCWGGT 1 cut(s) 957
MaeI CTAG 6 cut(s) 105, 275, 330, 567, 1041, 1167
MaeII ACGT 3 cut(s) 859, 936, 1195
MalI GATC 7 cut(s) 142, 585, 847, 1059, 1122, 1281, 1633
MbiI CCGCTC 1 cut(s) 444
MboI GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
MflI RGATCY 5 cut(s) 140, 1057, 1120, 1279, 1631
MhlI GDGCHC 4 cut(s) 92, 468, 1077, 1092
MlsI TGGCCA 1 cut(s) 1454
MluCI AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
MluNI TGGCCA 1 cut(s) 1454
MlyI GAGTC 4 cut(s) 179, 392, 429, 1730
MmeI TCCRAC 3 cut(s) 359, 386, 561
Mox20I TGGCCA 1 cut(s) 1454
MroI TCCGGA 1 cut(s) 460
MroNI GCCGGC 1 cut(s) 301
MroXI GAANNNNTTC 2 cut(s) 840, 1113
MscI TGGCCA 1 cut(s) 1454
MseI TTAA 2 cut(s) 729, 1305
MslI CAYNNNNRTG 1 cut(s) 95
Msp20I TGGCCA 1 cut(s) 1454
MspA1I CMGCKG 2 cut(s) 254, 1550
MspI CCGG 5 cut(s) 48, 302, 454, 461, 917
MspR9I CCNGG 5 cut(s) 454, 469, 959, 1155, 1467
Mva1269I GAATGC 1 cut(s) 619
MvaI CCWGG 4 cut(s) 469, 959, 1155, 1467
MvnI CGCG 1 cut(s) 355
MwoI GCNNNNNNNGC 4 cut(s) 11, 472, 631, 1511
NaeI GCCGGC 1 cut(s) 303
NciI CCSGG 1 cut(s) 454
NdeII GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
NgoMIV GCCGGC 1 cut(s) 301
NheI GCTAGC 2 cut(s) 1040, 1166
NlaIII CATG 4 cut(s) 609, 644, 1366, 1615
NlaIV GGNNCC 7 cut(s) 52, 383, 410, 465, 712, 1281, 1473
NspI RCATGY 1 cut(s) 644
NspV TTCGAA 1 cut(s) 668
PagI TCATGA 1 cut(s) 1362
PasI CCCWGGG 1 cut(s) 468
PctI GAATGC 1 cut(s) 619
PdiI GCCGGC 1 cut(s) 303
PdmI GAANNNNTTC 2 cut(s) 840, 1113
PfeI GAWTC 5 cut(s) 242, 293, 874, 1098, 1483
PflFI GACNNNGTC 1 cut(s) 607
PflMI CCANNNNNTGG 1 cut(s) 1521
PfoI TCCNGGA 1 cut(s) 1153
PkrI GCNGC 5 cut(s) 322, 736, 824, 1672, 1675
PleI GAGTC 4 cut(s) 179, 392, 428, 1729
PpsI GAGTC 4 cut(s) 179, 392, 428, 1729
PshAI GACNNNNGTC 2 cut(s) 402, 429
PshBI ATTAAT 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 1092
Psp6I CCWGG 4 cut(s) 467, 957, 1153, 1465
PspGI CCWGG 4 cut(s) 467, 957, 1153, 1465
PspN4I GGNNCC 7 cut(s) 52, 383, 410, 465, 712, 1281, 1473
PspPI GGNCC 2 cut(s) 609, 1463
PsrI GAACNNNNNNTAC 2 cut(s) 1744, 1776
PstI CTGCAG 2 cut(s) 1668, 1675
PsuI RGATCY 5 cut(s) 140, 1057, 1120, 1279, 1631
PsyI GACNNNGTC 1 cut(s) 607
PvuII CAGCTG 1 cut(s) 1550
RsaI GTAC 3 cut(s) 514, 1113, 1586
RsaNI GTAC 3 cut(s) 513, 1112, 1585
RseI CAYNNNNRTG 1 cut(s) 95
SacI GAGCTC 1 cut(s) 1092
SalI GTCGAC 1 cut(s) 422
SaqAI TTAA 2 cut(s) 729, 1305
SatI GCNGC 5 cut(s) 321, 735, 823, 1671, 1674
Sau3AI GATC 7 cut(s) 140, 583, 845, 1057, 1120, 1279, 1631
Sau96I GGNCC 2 cut(s) 609, 1463
SbfI CCTGCAGG 1 cut(s) 1668
ScaI AGTACT 1 cut(s) 1113
SchI GAGTC 4 cut(s) 179, 392, 429, 1730
ScrFI CCNGG 5 cut(s) 454, 469, 959, 1155, 1467
SdaI CCTGCAGG 1 cut(s) 1668
SduI GDGCHC 4 cut(s) 92, 468, 1077, 1092
SexAI ACCWGGT 1 cut(s) 957
SfaNI GCATC 1 cut(s) 1416
SfcI CTRYAG 2 cut(s) 1664, 1671
SfuI TTCGAA 1 cut(s) 668
SgrAI CRCCGGYG 1 cut(s) 47
SinI GGWCC 2 cut(s) 609, 1463
SmiMI CAYNNNNRTG 1 cut(s) 95
SmlI CTYRAG 3 cut(s) 189, 598, 1559
SmoI CTYRAG 3 cut(s) 189, 598, 1559
SpeI ACTAGT 1 cut(s) 104
Sse8387I CCTGCAGG 1 cut(s) 1668
Sse9I AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
SsiI CCGC 9 cut(s) 5, 45, 252, 272, 320, 355, 442, 693, 1746
SspI AATATT 1 cut(s) 199
SspMI CTAG 6 cut(s) 105, 275, 330, 567, 1041, 1167
SstI GAGCTC 1 cut(s) 1092
StyD4I CCNGG 5 cut(s) 452, 467, 957, 1153, 1465
StyI CCWWGG 1 cut(s) 1029
TaaI ACNGT 6 cut(s) 345, 768, 841, 1079, 1379, 1502
TaiI ACGT 3 cut(s) 862, 939, 1198
TaqI TCGA 6 cut(s) 183, 296, 423, 668, 844, 1724
TaqII GACCGA 1 cut(s) 365
TasI AATT 7 cut(s) 670, 757, 879, 980, 1418, 1526, 1616
TatI WGTACW 3 cut(s) 512, 1111, 1584
TauI GCSGC 1 cut(s) 323
TfiI GAWTC 5 cut(s) 242, 293, 874, 1098, 1483
Tru1I TTAA 2 cut(s) 729, 1305
Tru9I TTAA 2 cut(s) 729, 1305
TscAI CASTG 4 cut(s) 322, 433, 1465, 1507
TseI GCWGC 4 cut(s) 734, 822, 1670, 1673
TspGWI ACGGA 5 cut(s) 100, 254, 436, 469, 696
TspRI CASTG 4 cut(s) 322, 433, 1465, 1507
Tth111I GACNNNGTC 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 1521
VpaK11BI GGWCC 2 cut(s) 609, 1463
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 1 cut(s) 1526
XceI RCATGY 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 236, 423
XmnI GAANNNNTTC 2 cut(s) 840, 1113
XspI CTAG 6 cut(s) 105, 275, 330, 567, 1041, 1167
ZrmI AGTACT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.