RchiOBHm_Chr1g0351141

BEACH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0008085
Physical Location & Seq
Reverse (-)
44341668 .. 44365354
23687 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 8955 bp
ATGGAAGAAGAAGAGGAGAGGAAGAAGGAGGTTGAAAATATTTCCAGGAAGGATACAAATAATCATGAGCTGGTTAGTGGTGTACAGGAAAATGTTGATCCATCTCCACAGGAAGCTACCGTTAATACTGATGGTAAAGCTGATGCAGGACGGAATAGTGTAACATTGCAGGTAACAGATTCTGTACCTAAAGTTTTGGATGAAGACCAATTCGAGCAGGTCAACTTGAAAGAACAAGATAAGAATGTTGGTGCATCTCATAGCAGTCATGTGGAATCAAATCGGTCATCAAATTCAGACAATGCCAGACAATCATATGGTGGGTTTGAAGTTGCCTCACAGGCTTTTACATCAGAATTCGATACTTCTATGGTTGATGAAATGCATGATGATCAGTCTACCTGGAGCCCACGTCAGGACAGTCAATTTGGTCACTCTAACTACACATCTATGTCGGCTGCTAGTTTTGATTCTTCTTCTTATTATGGGGATGCAGGTTATTCTCCTGTTAGTTCACCCCCAAAACCAAGGCAGAAACCTGTTATGCCCAATGTATCTCCGGAGTTACTACATTTGGTGGATTCTGCCATCATGGGAAAGCCTGAAAGTTTGGACAAACTGAAGAATATTGTTAGTGGTGTGGAGAGTTTTGGAACTGGGGAGGAAATGGAGAGCATTGCTTACTTGGTAGTTGATTCGCTTATTGCAACAATGGGTGGTGTTGAAAGTTATGAAGAAGATGAGGATAACAATCCTCCTAGCGTGATGCTAAACTCTCGAGCTGCCATTGTAGCAGGCGAACTTATTCCCTCGCTTCCTGGGTTTGGTGATAGTCATGCTATCATGTCCCCTCGCACACGAATGGTGAGGGGGCTGCTTGCAATATTACGGGCTTGTACAAGAAACAGAGCGATGTGCTCAATGGCTGGTTTATTAGGAGTTCTATTAAGGTCAGCAGAGAAGATTTTTATGCAGGATGTTAATTCAACGGAGCAAATGAGATGGGATGGAACTCCCTTATGTTACTGCATTCAACATTTAGCAGGGCATTCACTTAGTGTAGTTGATATGCACAGATGGTTTCAAGTCATTACTCGAACGCTTACCACAGTATGGGCAACCCGATTAATGCTTGCACTGGAGAAGGCAATGGGTGGAAAGGAGTCGAGGGGACCTGCATGTACTTTTGAGTTTGATGGTGAAAGTTCAGGTTTGCTTGGTCCAGGGGAAAGCCGTTGGCCATTTGCCAATGGGTATGCGTTTGCAACATGGATTTACATTGAATCATTTGCAGATACATTGAATGCAGCAACTGCTGCAGCAGCGATTGCTGCAGCTGCTGCTGCCAAATCAGGAAAGTCGTCGGCAATGTCGGCTGCTGCTGCTGCCAGTGCACTTGCTGGTGAAGGCACAGCACACATGCCACGGTTGTTCAGTTTCTTATCTGCTGACAATCAGGGGTTAGAGGCATACTTCCACGCACAGTTTTTGGTGGTCGAATGTGGTAGTGGAAAGGGTAAGAAATCTTCATTACATTTTACGCATGCATTCAAGCCGCAATGCTGGTACTTCATTGGTCTAGAGCATACTTGCAAGCAAGGGCTGCTTGGGAAAGCAGACAGTGAATTAAGATTGTATATTGATGGTTCGCTGTACGAAACTCGACCTTTTGAGTTCCCCCGGATCTCTAAGCCACTTGCATTTTGCTGCATTGGGACAAATCCTCCTGCTACAATGGCTGGATTACAACGTCGTCGCCGTCAATGCCCTTTGTTTGCTGAGATGGGGCCTGTTTATATTTTTAAGGAACCAATTGGTCCAGAAAGGATGTCACGTTTGGCTTCTAGGGGAGGGGATGCACTTCCTTCTTTTGGTCATGGGGCAGGGCTGCCATGGCTAGCAACAAACATGGAAGTGCAAAATATGGCAGAGGAAAGTTCACTTTTGGATGCAGAAATTGGAGGACTCATTCACCTTTTCTACCACCCCAGTTTGCTCAGCGGGCGGTTCTGTCCAGATGCTTCCCCGAGTGGTGCCTCAGGCATGCTTCGACGACCAGCAGAGGTTCTTGGGCAGGTACATATTGCTACACGAGTGCGGCCTGTAGCAGCTCTATGGGCCTTTTCCTATGGGGGTCCTATGTCTTTACTTCCTTTAGCAGTTAGCAATGTGGATAAAGATACCCTTGAACCACAACAAGGGAATCCCTCTTTGTCTTTGGCTACCACTGCTCTTGCTGCTCCGATATTCCGAATAATTAGCACTGCTATTCGACACCCTTGGAACAGTGAAGAGTTGTGTCGTACCAAAGGGCCTGAGGTTCTGTCAAGAATCTTGAACTATCTTTTGCAAACTTTGTCTTCACTTTATGCTGGAAAACAAAATGGTGTGGGCGATGAGGAGCTTGTTGCGTCCGTTTTATCACTATGTCAATCTCAGCAGAAGAACTATGCACTCAAGGTGCAGCTTTTCAGTACATTGCTATTGGATCTAAAAGTTTGGAGCTTATGTAACTATGGGCTACAAAAGAAGCTTCTGTCATCACTTGCAGACATGGTTTTTACAGAGTCATCAGTAATGCGAGATGCTAATGCCATTCAGATGCTTCTTGACAGTTGCAGAAGATGCTATTGGACAATTCGCGAAAAGGATTCAGTGAATACTTTTTCTCTTTCACTTCATGAGGCAAGCCGGCCTGTGGGTGAGGTGAATGCTTTGGTTGATGAACTCTTGGTCATTATTGAACTTCTTCTAGTAGCAGCACCTCCTTCATTGGCTTCAGATGACGTTCGTTGTTTACTGGGGTTCATGGTTGACTGCCCACAACCCAATCAGGTTGCAAGGGTCTTGCATCTGATTTATAGATTGGTGGTACAGCCAAATACATCAAGAGCTCAGACATTTGCAGAGGCATTTATAGCTTGTGGTGGGGTAGAGACCCTTCTTGTTTTGTTGCAACGAGAAGCCAAAGTGGGTGACTACAGTGTTCCAGAATCCATGACCAAGACTGATGAAGTTTTGTCAGTCCAGCCACCTGAGCAAGATGGTAGTGTTGGGGGAGTTTCTGAAAAGAATCAGGATGATGAAGTAGAATTGTCAAAGGAAAAGGAAAATTTGCATGAGAAAGTTGTTGAATCCCAATCCCATGATGGAGCTAGCAGTCCGATTTCTGTTTCTCCTGAGTTGAACATTGCAAGAATGACTTCTGCTTCAGAAAGTACATTTATAAAGAATCTGGGTGGTATAGCTCTCTCAATTAGTGCTGATAATGCAAGGAATAATGTTTACAATATTGATAAAAGTGATGGGGTTGTTGCCCGAATCATCGGGCTCTTAGGTGCTTTAGTTGCTTTTGGGTACTTGAAAATTGGTTCAACTGCTTCCTCGGATATGACTAACAACCTTTTAGGAAGTGCACTGCATGATGGAGGGGGTGGCATGTTTGAAGATAAAGTTTCCCTTTTACTTTTTGCTTTACAAAAGGCTTTCCAAGCAGCACCAAACCGATTATTGACCAGTAATGTGTATGCAGCATTGTTGGGGGCGTCGATAAATGCCTCTTCAACTGATGAGGGGTTGAACTTCTATGATTCTGGTCATCAATTTGAACATTTGCAACTTCTTTTGGTTCTCTTGCGGTCACTTCCATATGCACCCAAGGCTTTTCAAACCCGAGCGCTACAGGATCTTCTGTTTTTGGCTTGCAGTCAGTCAGAAAATAGAAGCAGTCTTACAAACATGGAGGAATGGCCTGAATGGATTCTTGAGGTTCTCATCTCTAACTATGAGATGGGTGCAAGCAAACATTCTGATTCTGCAAGATCAGGAGACATAGAAGACCTCATACACAACTTCCTGATTATAATGTTAGAGCATTCCATGCGCCAGAAGGATGGCTGGAAGGATATTGAAGCTACAATTCATTGTGCAGAGTGGCTTTCTATAGTGGGTGGATCAAGCACCGGAGACCAACGGGTTAGGCGCGAGGAATCATTACCCATATTTAAAAGGAGGCTATTAGGTGGTTTGCTGGACTTCGCAGCTAGAGAACTCCAGGTTCAGACTCAAGTTATTGCTGCGGCATCTGCTAATGTGGCATCAGGGACTTCATCACCAAAAGATGCCAAGGCAGAAGCAGAAAATGTGGCTCAACTTTCTGTAGCATTAGTAGAGAATGCAATAGTGATACTAATGCTTGTTGAGGATCATTTACGGTTACAGTGCAAACTGTCTTCTGTTTCACGTGCAACAGATAGTTCTCCATCTCCCCTTTCTCTTGTATCTCCCCTCAATAACCAGTCAAATTCATCGAATACAGTTGGTGGAGATTCATTTGGGGCTTTGGGTGATCGCAAATCCTTATCTAGTGATTCTGGGGGACTTCCTCTTGATCTTCTTGCTTCAATGGCTGATGCAAATGGTCAAGTATCTGCAGCAGTGATGGAACGTCTTACTGCTGCAGCAGCGGCTGAGCCTTATGGGTCTGTTTCATGTGCTTTTGTATCATATGGAAGCTGTACTGCGGATCTAGCAATGGGGTGGAAGTATAGGAGCAGATTGTGGTATGGAGTAGGCATTCCTTCAAACACAGCAGCCTTTGGTGGTGGTGGCAGCGGTAGGGAATCTTGGATGGCTGCACTAGAGAAGGATGCAAACGGAAACTGGATTGAGCTTCCTTTGGTGAAAAAGTCTGTTGCAATGCTCCAAGCTTTACTATTAGATGATTCGGGACTTGGTGGTGGACTTGGCATAGGTGGTGGATCTGGTACTGGAATGGGAGGCATGGCAGCACTCTATCAGTTGTTGGACAGTGACCAACCATTCTTATGCATGCTCCGAATGACACTTCTTTCGATGAGAGAAGAAGATGATGGTGAAGAGAGCATGCTTATGAGCAATGTAAGCATAGATGTTGGGAAATCAGATGGGAGGAAACCACGATCAGCATTGCTGTGGAGTGTGCTTTCACCTGTTCTAAACATGCCAATTTCTGATTCCAAGAGGCAGAGAGTGTTGGTTGCTTCCTGTGTTCTTTATTCTGAGTTATATCATGCTGTTGGCAGGGATGGAAAGCCTCTCCGTAAACTTTACCTTGAGGCCATTGTACCTCCATTTGTTGCTGTTTTGAGGAGGTGGCGGCCAATTTTGGCTGGAATTCATGAACTTGCAACTGCTGATGGTCTGAATCCTCTTATGGTTGAAGACCGTGCATTGGCTGCTGATGCCCTTCCAATAGAGGCTGCTCTTGCAATGATCTCTCCAGCTTGGGCCGCTGCTTTTGCATCACCACCTGCTGCAATGGCACTGGCAATGATAGCTGCTGGTGCCTCTGGTGGAGAAACTCCAGCTCCTCCGACAACTTCTCAACTTAGGCGTGATTCCTCATTGCTTGAGCGGAAAACTAATAAGCTTCACACATTTTCGAGCTTCCAAAAACCTTTAGAGCAACCTGAAAAAGCCCCAGCTCTACCAAAGGATAAGGCCGCTGCAAAAGCTGCTGCCTTGGCTGCAGCACGTGATCTTGAACGTAATAATAAAATCGGTTCTGGAAGGGGCCTTAGTGCTGTGGCAATGGCCACATCTGCACAGCGGAGGAGTGCTGGTGACATGGAGCGTGTGAAGAGATGGAATATTGCTGAAGCAATGGAAGTTGCCTGGATGGAATGTTTGCAGCCAGTTGATACCAGATCAGTCTATGGAAAAGATTTTAATGCTTTATCGTATAAATTTATTGCTGTTCTTGTGGCAAGTTTTGCTTTAGCAAGAAACATCCAACGATCTGAGGTTGACAGACGTTCTCAAGTTGATCTAATAACTCGTCATCGTTTGGGCAAAGGAAGTCGTGCATGGCGCAAGCTCATGCATTGCTTGATTGAGATGAAGTGTCTTCTTGGGCCATCTGGAGACCAATTATGCAATCAATCACCTGTTTTCTGGAAGCTAGATTTTATGGAAAGTTCTTCTAGGATGAGACGATGTGTGAGGAGGAATTACGAAGGTTCTGACCATTTTGGTGCTGCTGCCAATTTTGAGGATCCTATTAAGACAAAAGAACAGGAAAATGTCATAAGTTCCTCAAATGCTCCTATTTTGGCAGCAGAAGCAATTGCCGTGGAGGCAGTAAACGAAGATGATGAACAAGGGGAGATTGAAAATATGGATGGTAGACCGTATGGTATGGAAGAGAGTGGAGAGAATCATTCACGACTGTCTGAAACAGCTGAGAAAAGCCTGCTGGCACCTGCTGAATCTGATGATACTCAAGTTGCTGGTGAACCAGGCTTGGTCCAAAGTTCGTCACCAATTGCGGCTGGATATGTTCCTAGTGAACTTGATGAAAGAATTGTTCTTGAGCTTCCTTCGTCAATGGTTCGCCCATTGAGGGTTATAAGTGGAACTTTTCAGGTAACAAGTAGAAGAATAAATTTCATAGTTGATAACAGTGATGTGAATGGTTCACTGGATGAACTAGATTGCAAGGAAATGAGAGAAGAACATAAGGATCGTAGCTGGTCTATGTCATCCCTTCATCAAATATACAGCCGAAGATATCTCCTAAGAAGAAGTGCACTGGAGCTATTTTTGGTTGATCGTTCAAACTTCTTCTTTGATTTTGGGAGTACGGAAGGACGAAGAAACGCATATCGAGCTATTGTTCAAGCACGGCCTCCCCATTTGAATAATATATATCTTGCAACTCAGAGACCTGAACAACTTCTCAAGAGAACACAGCTTATGGAGCGTTGGGCTAGGTGGGAGATCAGCAATTTTGAATATCTCATGCAGCTCAATACCCTTGCGGGGCGTAGTTACAATGATATTACTCAGTATCCTGTTTTCCCATGGATCCTTTCTGATTACAGTTCGAAGACTTTGGATCTTGCAGACCCTTCTTCTTATCGAGACCTTTCAAAGCCTGTTGGTGCTTTGAATTCTGATCGTCTGGAAAAATTTCAAGAGAGATATTCCAGCTTCGAGGACCCAGTTATACCCAAATTCCATTATGGTTCTCATTATTCCAGCGCTGGAACAGTGCTATATTATCTTGTTAGAGTTGAACCGTTTACAACTCTGTCAATTCAACTGCAAGGCGGAAAGTTTGATCATGCAGATCGGATGTTTTCAGATATTGCTTCTACTTGGAATGGAGTTACTGAAGACATGAGTGATGTGAAGGAATTGGTTCCCGAGTTGTTCTACCTCCCTGAGATCTTAACCAATGAAAATTCAATCGATTTTGGTACAACACAAACAGGCGGAAAACTTGGTTCTGTCAAACTTCCACCATGGGCAGAAAACCCAATTGATTTCATTCATAAGCATCGGAAGGCTCTTGAAAGCGAACACGTATCTGCACATTTGCATGAATGGATTGATCTTATATTTGGGTATAAGCAACGTGGCAAAGAAGCTATATTGGCAAATAATGTTTTCTTCTACATTACCTATGAAGGGACTGTTGATATTGATAAGATATCAGACCCAGTACAACAACGTGCAACACAAGACCAGATTGCATACTTTGGTCAAACGCCATCGCAACTTCTTACCATCCCTCACTTGAAGAAGATGCCACTAGCAGATGTTCTTCATTTGCAGACCATCTTCCGGAACCCAAAAGAAGTCAAACAATATGCTGTTCCTGCTCCTGAGCGTTGCAATCTTCCTGCAGCTGGTATTCATGCATCTTCAGATACTGTCGTAATTGTTGATATGCATGCACCAGCAGCACATGTTGCACAGCACAAGTGGCAGCCGAACACTCCTGACGGTCAAGGTATGCCTTTCCTCTTTCAACACGGAAAGCCTGCAGCAAGCTCCACTGGTGGAGCATTTATGCGTATGTTCAAAGGGCCTGCTGGATCTGGTTCTGAGGATTGGCTTTTTCCTCAAGCGCTAGCATTTGCTACGTCTGGAATCAGAAGCTCGGCTATAGTTTCCATAACATGTGACAAAGAAGTCATCACTGGTGGGCATGTGGACAACAGTATCAAGCTAGTTTCATCAGATGGAGCAAAAACCTTGGAGACAGCCTTTGGCCACTGCGCTCCAGTCACTTGTCTTGGACTTTCACCTGATAGCAACTACCTTGTGACGGGATCCAGAGATACTACTGTTTTACTTTGGAGAGTACATAGAGCATTTACTTCTCGCTCAAGCAGCGTATCGGAGTCTTCTAGTGGGACACCAGGCACAACCAGCAATAGTAATTTATCACATATATTGGCAGACAAAAGCAGGAGGCGTCGTATTGAAGGCCCCATACATGTTCTTCGAGGCCACCAGAGGGAAATACTTTCTTGCTGTGTGAGCTCAGATCTTGGGATAGTTGTTTCATGCTCCCAATCATCAGATGTGCTCTTGCATTCTATAAGAAGAGGTCGGCTGATCAGAAGGCTGCCTGGTGTGGAGGCCCATGCTGTCTGCCTCTCATCTGAGGGAGTTGTATTGACTTGGAATAAAACACTCAATACTTTGAGTACCTTTACTCTTAATGGATCTCTCATTGCCAGAGCTCAGTTACCGGTCTCTGGTAGCATCAGTTGTATGGAAATTTCTGTTGATGGATGGAGTGCTTTGATAGGAATAAACTTGTCTATAGAAAGTGATAGAACCTTCAGCGGCAGCTGGGATTCTAAGCTTAAGAACACAGAGTTTGAGGATCTTTCACTGGAGTCGGAGGGAACTGAAGAAATCAACAGATTGGACACTCCATCGCCTTCAATTTGCTTCCTGGATATTCACACACTGAAGGTTTTTCATATATTGAAGTTGGGAGAAGGAAGGGAGATCACATCTCTTGCTCTAAACACAGACAATACAAACCTTCTGGTGTCGACTGCAGATAAACAGTTGATAATTTTCACTGATCCAGCTTTGAGCTTGAAAGTGGTGGATCAGATGCTCAAGCTTGGTTGGGAAGGTGATGGGCTAAGTCCCCTAATAAAATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005911 GO:0009506 GO:0012505 GO:0030054 GO:0044464 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Beach DUF4704 PH_BEACH WD40

Protein Analysis

2984

Amino Acids

325.35

Weight (kDa)

5.54

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4704 PF15787 684 - 990 2.5e-58 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4704 PF15787 1175 - 1309 1.2e-08 Neurobeachin/BDCP, DUF4704 alpha solenoid region
PH_BEACH PF14844 2122 - 2219 1e-26 PH domain associated with Beige/BEACH
Beach PF02138 2247 - 2522 1.9e-121 Beige/BEACH domain
WD40_Prp19 PF24814 2640 - 2801 1.3e-06 Prp19 WD40 domain
NBCH_WD40 PF20426 2644 - 2854 4.1e-22 Neurobeachin beta propeller domain
Beta-prop_WDR3_1st PF25173 2646 - 2712 1.9e-06 WDR3 first beta-propeller domain
Beta-prop_WDR5 PF25175 2646 - 2714 1.6e-06 WDR5 beta-propeller domain
Beta-prop_WDR3_2nd PF25172 2646 - 2784 1.6e-08 WDR3 second beta-propeller domain
WD40_WDHD1_1st PF24817 2646 - 2725 2.2e-06 WDHD1 first WD40 domain
Beta-prop_THOC3 PF25174 2651 - 2725 3.5e-07 THOC3 beta-propeller domain
WD40 PF00400 2677 - 2709 2.7e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 3227, 3863, 6389
AarI CACCTGC 2 cut(s) 5299, 6250
AasI GACNNNNNNGTC 1 cut(s) 7958
Acc36I ACCTGC 7 cut(s) 160, 208, 485, 1183, 2065, 5299, 6250
AccB1I GGYRCC 3 cut(s) 2033, 5324, 6238
AccB7I CCANNNNNTGG 1 cut(s) 1113
AccBSI CCGCTC 1 cut(s) 5395
AccI GTMKAC 3 cut(s) 398, 6166, 8837
AccII CGCG 2 cut(s) 2643, 3984
AccIII TCCGGA 2 cut(s) 559, 7608
AcoI YGGCCR 4 cut(s) 1238, 5138, 5574, 8038
AcuI CTGAAG 9 cut(s) 641, 2763, 3195, 5658, 7176, 7674, 8602, 8709, 8771
AcvI CACGTG 2 cut(s) 4244, 5516
AcyI GRCGYC 2 cut(s) 3545, 8245
AdeI CACNNNGTG 1 cut(s) 1058
AfeI AGCGCT 3 cut(s) 3678, 7024, 7896
AflII CTTAAG 1 cut(s) 8642
AflIII ACRYGT 4 cut(s) 7345, 7732, 7946, 8266
AgeI ACCGGT 1 cut(s) 8524
AjiI CACGTC 1 cut(s) 413
AjuI GAANNNNNNNTTGG 4 cut(s) 2614, 2646, 4978, 5010
Alw21I GWGCWC 8 cut(s) 920, 1396, 2896, 3418, 6571, 8315, 8361, 8518
Alw26I GTCTC 9 cut(s) 2930, 3822, 3960, 5898, 5965, 6697, 6897, 8021, 8533
Alw44I GTGCAC 3 cut(s) 1392, 3414, 6567
AlwNI CAGNNNCTG 5 cut(s) 182, 1313, 1340, 4469, 7697
Ama87I CYCGRG 4 cut(s) 777, 2026, 3672, 7187
Aor13HI TCCGGA 2 cut(s) 559, 7608
Aor51HI AGCGCT 3 cut(s) 3678, 7024, 7896
ApaLI GTGCAC 3 cut(s) 1392, 3414, 6567
ArsI GACNNNNNNTTYG 4 cut(s) 410, 442, 4834, 4866
AseI ATTAAT 1 cut(s) 1127
AsiGI ACCGGT 1 cut(s) 8524
Asp700I GAANNNNTTC 7 cut(s) 804, 2748, 3202, 3759, 6714, 6951, 7182
AspLEI GCGC 7 cut(s) 3679, 3885, 3984, 5853, 7025, 7897, 8048
AsuC2I CCSGG 1 cut(s) 1681
AsuII TTCGAA 1 cut(s) 6866
AsuNHI GCTAGC 3 cut(s) 1897, 3155, 7897
AvaI CYCGRG 4 cut(s) 777, 2026, 3672, 7187
AvaII GGWCC 6 cut(s) 1172, 1220, 1817, 2135, 6286, 6979
AxyI CCTNAGG 2 cut(s) 2038, 2316
BaeGI GKGCMC 3 cut(s) 1396, 3418, 6571
BaeI ACNNNNGTAYC 8 cut(s) 6249, 6282, 7686, 7719, 7972, 8005, 8100, 8133
BalI TGGCCA 3 cut(s) 1240, 5576, 8040
BamHI GGATCC 3 cut(s) 6034, 6846, 8099
BanI GGYRCC 3 cut(s) 2033, 5324, 6238
BanII GRGCYC 5 cut(s) 410, 2896, 3333, 8315, 8518
BauI CACGAG 1 cut(s) 2091
BbrPI CACGTG 2 cut(s) 4244, 5516
BbsI GAAGAC 9 cut(s) 210, 2352, 3843, 4224, 5208, 5879, 6875, 7164, 8166
Bbv12I GWGCWC 8 cut(s) 920, 1396, 2896, 3418, 6571, 8315, 8361, 8518
BceAI ACGGC 4 cut(s) 1218, 1743, 6095, 6680
BciVI GTATCC 2 cut(s) 46, 6840
BclI TGATCA 3 cut(s) 391, 7102, 8388
BcnI CCSGG 1 cut(s) 1681
BcoDI GTCTC 9 cut(s) 2930, 3822, 3960, 5898, 5965, 6697, 6897, 8021, 8533
BfoI RGCGCY 3 cut(s) 3680, 7026, 7898
BfrI CTTAAG 1 cut(s) 8642
BfuAI ACCTGC 7 cut(s) 160, 208, 485, 1183, 2065, 5299, 6250
BfuI GTATCC 2 cut(s) 46, 6840
BglI GCCNNNNNGGC 2 cut(s) 341, 6116
BglII AGATCT 2 cut(s) 7209, 8317
BlpI GCTNAGC 2 cut(s) 1997, 4470
Bme18I GGWCC 6 cut(s) 1172, 1220, 1817, 2135, 6286, 6979
BmeT110I CYCGRG 4 cut(s) 777, 2026, 3672, 7187
BmgBI CACGTC 1 cut(s) 413
BmrI ACTGGG 5 cut(s) 666, 1983, 2810, 6977, 7478
BmtI GCTAGC 3 cut(s) 1901, 3159, 7901
BmuI ACTGGG 5 cut(s) 666, 1983, 2810, 6977, 7478
BpiI GAAGAC 9 cut(s) 210, 2352, 3843, 4224, 5208, 5879, 6875, 7164, 8166
BpmI CTGGAG 9 cut(s) 424, 1160, 4037, 5244, 5328, 5922, 6593, 8034, 8693
Bpu10I CCTNAGC 2 cut(s) 3036, 7650
Bpu1102I GCTNAGC 2 cut(s) 1997, 4470
Bpu14I TTCGAA 1 cut(s) 6866
BpuMI CCSGG 1 cut(s) 1681
Bsa29I ATCGAT 1 cut(s) 7233
BsaAI YACGTR 3 cut(s) 4244, 5516, 7348
BsaBI GATNNNNATC 1 cut(s) 750
BsaHI GRCGYC 2 cut(s) 3545, 8245
BsaI GGTCTC 6 cut(s) 2930, 3960, 5898, 6697, 6897, 8533
BsaWI WCCGGW 4 cut(s) 559, 3962, 7608, 8524
Bse118I RCCGGY 2 cut(s) 2691, 8524
Bse21I CCTNAGG 2 cut(s) 2038, 2316
Bse8I GATNNNNATC 1 cut(s) 750
BseAI TCCGGA 2 cut(s) 559, 7608
BseCI ATCGAT 1 cut(s) 7233
BseJI GATNNNNATC 1 cut(s) 750
BseRI GAGGAG 6 cut(s) 29, 2414, 5143, 5340, 5608, 5998
BseSI GKGCMC 3 cut(s) 1396, 3418, 6571
BseYI CCCAGC 2 cut(s) 5461, 8628
BsgI GTGCAG 5 cut(s) 2483, 3948, 4620, 5568, 7338
Bsh1236I CGCG 2 cut(s) 2643, 3984
BshNI GGYRCC 3 cut(s) 2033, 5324, 6238
BshTI ACCGGT 1 cut(s) 8524
BshVI ATCGAT 1 cut(s) 7233
BsiHKAI GWGCWC 8 cut(s) 920, 1396, 2896, 3418, 6571, 8315, 8361, 8518
BsiHKCI CYCGRG 4 cut(s) 777, 2026, 3672, 7187
BsiSI CCGG 6 cut(s) 560, 1681, 2692, 3963, 7609, 8525
BslFI GGGAC 9 cut(s) 832, 1185, 1729, 4117, 4392, 4743, 7468, 8197, 8922
BsmAI GTCTC 9 cut(s) 2930, 3822, 3960, 5898, 5965, 6697, 6897, 8021, 8533
BsmBI CGTCTC 1 cut(s) 5965
BsmFI GGGAC 9 cut(s) 832, 1185, 1729, 4117, 4392, 4743, 7468, 8197, 8922
BsmI GAATGC 9 cut(s) 1029, 1048, 1309, 1547, 2716, 3874, 4180, 4575, 8365
Bso31I GGTCTC 6 cut(s) 2930, 3960, 5898, 6697, 6897, 8533
BsoBI CYCGRG 4 cut(s) 777, 2026, 3672, 7187
Bsp119I TTCGAA 1 cut(s) 6866
Bsp13I TCCGGA 2 cut(s) 559, 7608
Bsp1407I TGTACA 2 cut(s) 82, 896
Bsp1720I GCTNAGC 2 cut(s) 1997, 4470
Bsp19I CCATGG 3 cut(s) 1892, 6842, 7286
Bsp68I TCGCGA 1 cut(s) 2643
BspDI ATCGAT 1 cut(s) 7233
BspEI TCCGGA 2 cut(s) 559, 7608
BspFNI CGCG 2 cut(s) 2643, 3984
BspHI TCATGA 3 cut(s) 64, 2680, 5158
BspMAI CTGCAG 8 cut(s) 1321, 1336, 4435, 4462, 5512, 7672, 7813, 8845
BspMI ACCTGC 7 cut(s) 160, 208, 485, 1183, 2065, 5299, 6250
BspOI GCTAGC 3 cut(s) 1901, 3159, 7901
BspT104I TTCGAA 1 cut(s) 6866
BspT107I GGYRCC 3 cut(s) 2033, 5324, 6238
BspTI CTTAAG 1 cut(s) 8642
BspTNI GGTCTC 6 cut(s) 2930, 3960, 5898, 6697, 6897, 8533
BsrBI CCGCTC 1 cut(s) 5395
BsrFI RCCGGY 2 cut(s) 2691, 8524
BsrGI TGTACA 2 cut(s) 82, 896
BssAI RCCGGY 2 cut(s) 2691, 8524
BssNI GRCGYC 2 cut(s) 3545, 8245
BssSI CACGAG 1 cut(s) 2091
BssT1I CCWWGG 9 cut(s) 527, 1892, 2279, 3657, 4125, 5502, 6842, 7286, 8022
Bst2BI CACGAG 1 cut(s) 2091
Bst6I CTCTTC 7 cut(s) 6, 2286, 3565, 4872, 5615, 6177, 8371
BstACI GRCGYC 2 cut(s) 3545, 8245
BstAFI CTTAAG 1 cut(s) 8642
BstAUI TGTACA 2 cut(s) 82, 896
BstBAI YACGTR 3 cut(s) 4244, 5516, 7348
BstBI TTCGAA 1 cut(s) 6866
BstDSI CCRYGG 5 cut(s) 1424, 1892, 6111, 6842, 7286
BstFNI CGCG 2 cut(s) 2643, 3984
BstH2I RGCGCY 3 cut(s) 3680, 7026, 7898
BstHHI GCGC 7 cut(s) 3679, 3885, 3984, 5853, 7025, 7897, 8048
BstMAI GTCTC 9 cut(s) 2930, 3822, 3960, 5898, 5965, 6697, 6897, 8021, 8533
BstSLI GKGCMC 3 cut(s) 1396, 3418, 6571
BstUI CGCG 2 cut(s) 2643, 3984
BstV2I GAAGAC 9 cut(s) 210, 2352, 3843, 4224, 5208, 5879, 6875, 7164, 8166
BstXI CCANNNNNNTGG 1 cut(s) 3893
Bsu15I ATCGAT 1 cut(s) 7233
Bsu36I CCTNAGG 2 cut(s) 2038, 2316
BsuI GTATCC 2 cut(s) 46, 6840
BsuTUI ATCGAT 1 cut(s) 7233
BtgI CCRYGG 5 cut(s) 1424, 1892, 6111, 6842, 7286
BtgZI GCGATG 4 cut(s) 926, 2409, 7521, 8700
BtrI CACGTC 1 cut(s) 413
BtsI GCAGTG 5 cut(s) 2226, 2262, 3416, 4443, 8041
BtuMI TCGCGA 1 cut(s) 2643
BveI ACCTGC 7 cut(s) 160, 208, 485, 1183, 2065, 5299, 6250
CaiI CAGNNNCTG 5 cut(s) 182, 1313, 1340, 4469, 7697
CciI TCATGA 3 cut(s) 64, 2680, 5158
CfoI GCGC 7 cut(s) 3679, 3885, 3984, 5853, 7025, 7897, 8048
Cfr10I RCCGGY 2 cut(s) 2691, 8524
ClaI ATCGAT 1 cut(s) 7233
CseI GACGC 3 cut(s) 2400, 3534, 8234
CspAI ACCGGT 1 cut(s) 8524
CspCI CAANNNNNGTGG 4 cut(s) 2215, 2250, 6093, 6128
DraI TTTAAA 1 cut(s) 4006
DraIII CACNNNGTG 1 cut(s) 1058
DrdI GACNNNNNNGTC 1 cut(s) 7958
DseDI GACNNNNNNGTC 1 cut(s) 7958
EaeI YGGCCR 4 cut(s) 1238, 5138, 5574, 8038
Eam1104I CTCTTC 7 cut(s) 6, 2286, 3565, 4872, 5615, 6177, 8371
EarI CTCTTC 7 cut(s) 6, 2286, 3565, 4872, 5615, 6177, 8371
EciI GGCGGA 2 cut(s) 7107, 7272
Ecl136II GAGCTC 3 cut(s) 2894, 8313, 8516
Eco130I CCWWGG 9 cut(s) 527, 1892, 2279, 3657, 4125, 5502, 6842, 7286, 8022
Eco24I GRGCYC 5 cut(s) 410, 2896, 3333, 8315, 8518
Eco31I GGTCTC 6 cut(s) 2930, 3960, 5898, 6697, 6897, 8533
Eco32I GATATC 2 cut(s) 6551, 7476
Eco47I GGWCC 6 cut(s) 1172, 1220, 1817, 2135, 6286, 6979
Eco47III AGCGCT 3 cut(s) 3678, 7024, 7896
Eco53kI GAGCTC 3 cut(s) 2894, 8313, 8516
Eco57I CTGAAG 9 cut(s) 641, 2763, 3195, 5658, 7176, 7674, 8602, 8709, 8771
Eco72I CACGTG 2 cut(s) 4244, 5516
Eco81I CCTNAGG 2 cut(s) 2038, 2316
Eco88I CYCGRG 4 cut(s) 777, 2026, 3672, 7187
EcoICRI GAGCTC 3 cut(s) 2894, 8313, 8516
EcoO109I RGGNCCY 8 cut(s) 1172, 1787, 2135, 2312, 5554, 6979, 7853, 8258
EcoRI GAATTC 3 cut(s) 356, 5154, 6931
EcoRV GATATC 2 cut(s) 6551, 7476
EcoT14I CCWWGG 9 cut(s) 527, 1892, 2279, 3657, 4125, 5502, 6842, 7286, 8022
EcoT22I ATGCAT 6 cut(s) 387, 1549, 4832, 5865, 7687, 7719
EcoT38I GRGCYC 5 cut(s) 410, 2896, 3333, 8315, 8518
ErhI CCWWGG 9 cut(s) 527, 1892, 2279, 3657, 4125, 5502, 6842, 7286, 8022
Esp3I CGTCTC 1 cut(s) 5965
FaqI GGGAC 9 cut(s) 832, 1185, 1729, 4117, 4392, 4743, 7468, 8197, 8922
FauI CCCGC 2 cut(s) 1994, 6793
FauNDI CATATG 3 cut(s) 316, 3649, 4507
FbaI TGATCA 3 cut(s) 391, 7102, 8388
FblI GTMKAC 3 cut(s) 398, 6166, 8837
FriOI GRGCYC 5 cut(s) 410, 2896, 3333, 8315, 8518
GlaI GCGC 7 cut(s) 3678, 3884, 3983, 5852, 7024, 7896, 8047
GsaI CCCAGC 2 cut(s) 5465, 8632
GsuI CTGGAG 9 cut(s) 424, 1160, 4037, 5244, 5328, 5922, 6593, 8034, 8693
HaeII RGCGCY 3 cut(s) 3680, 7026, 7898
HapII CCGG 6 cut(s) 560, 1681, 2692, 3963, 7609, 8525
HgaI GACGC 3 cut(s) 2400, 3534, 8234
HhaI GCGC 7 cut(s) 3679, 3885, 3984, 5853, 7025, 7897, 8048
Hin1I GRCGYC 2 cut(s) 3545, 8245
Hin6I GCGC 7 cut(s) 3677, 3883, 3982, 5851, 7023, 7895, 8046
HinP1I GCGC 7 cut(s) 3677, 3883, 3982, 5851, 7023, 7895, 8046
HincII GTYRAC 4 cut(s) 223, 2815, 5788, 8838
HindII GTYRAC 4 cut(s) 223, 2815, 5788, 8838
HindIII AAGCTT 5 cut(s) 2531, 4707, 5408, 8639, 8909
HpaII CCGG 6 cut(s) 560, 1681, 2692, 3963, 7609, 8525
Hpy99I CGWCG 6 cut(s) 1366, 1755, 1758, 2055, 3550, 8250
Hsp92I GRCGYC 2 cut(s) 3545, 8245
HspAI GCGC 7 cut(s) 3677, 3883, 3982, 5851, 7023, 7895, 8046
Kpn2I TCCGGA 2 cut(s) 559, 7608
KroI GCCGGC 1 cut(s) 2691
KroNI GCCGGC 1 cut(s) 2693
Ksp22I TGATCA 3 cut(s) 391, 7102, 8388
MbiI CCGCTC 1 cut(s) 5395
MfeI CAATTG 4 cut(s) 1812, 6105, 6303, 7302
MlsI TGGCCA 3 cut(s) 1240, 5576, 8040
MluNI TGGCCA 3 cut(s) 1240, 5576, 8040
MlyI GAGTC 6 cut(s) 1172, 1959, 2576, 4057, 8180, 8684
MmeI TCCRAC 4 cut(s) 4785, 5378, 5797, 8658
Mox20I TGGCCA 3 cut(s) 1240, 5576, 8040
Mph1103I ATGCAT 6 cut(s) 387, 1549, 4832, 5865, 7687, 7719
MroI TCCGGA 2 cut(s) 559, 7608
MroNI GCCGGC 1 cut(s) 2691
MroXI GAANNNNTTC 7 cut(s) 804, 2748, 3202, 3759, 6714, 6951, 7182
MscI TGGCCA 3 cut(s) 1240, 5576, 8040
MslI CAYNNNNRTG 9 cut(s) 449, 860, 1913, 2600, 4825, 4889, 4951, 6012, 7362
Msp20I TGGCCA 3 cut(s) 1240, 5576, 8040
MspCI CTTAAG 1 cut(s) 8642
MspI CCGG 6 cut(s) 560, 1681, 2692, 3963, 7609, 8525
MunI CAATTG 4 cut(s) 1812, 6105, 6303, 7302
Mva1269I GAATGC 9 cut(s) 1029, 1048, 1309, 1547, 2716, 3874, 4180, 4575, 8365
MvnI CGCG 2 cut(s) 2643, 3984
NaeI GCCGGC 1 cut(s) 2693
NciI CCSGG 1 cut(s) 1681
NcoI CCATGG 3 cut(s) 1892, 6842, 7286
NdeI CATATG 3 cut(s) 316, 3649, 4507
NgoMIV GCCGGC 1 cut(s) 2691
NheI GCTAGC 3 cut(s) 1897, 3155, 7897
NmeAIII GCCGAG 1 cut(s) 7907
NruI TCGCGA 1 cut(s) 2643
NsiI ATGCAT 6 cut(s) 387, 1549, 4832, 5865, 7687, 7719
NspV TTCGAA 1 cut(s) 6866
PaeI GCATGC 5 cut(s) 1547, 2047, 4834, 4888, 7721
PaeR7I CTCGAG 1 cut(s) 777
PagI TCATGA 3 cut(s) 64, 2680, 5158
PaqCI CACCTGC 2 cut(s) 5299, 6250
PciI ACATGT 3 cut(s) 7732, 7946, 8266
PcsI WCGNNNNNNNCGW 1 cut(s) 1756
PctI GAATGC 9 cut(s) 1029, 1048, 1309, 1547, 2716, 3874, 4180, 4575, 8365
PdiI GCCGGC 1 cut(s) 2693
PdmI GAANNNNTTC 7 cut(s) 804, 2748, 3202, 3759, 6714, 6951, 7182
PflMI CCANNNNNTGG 1 cut(s) 1113
PfoI TCCNGGA 2 cut(s) 44, 8733
PinAI ACCGGT 1 cut(s) 8524
PleI GAGTC 6 cut(s) 1171, 1959, 2575, 4057, 8179, 8683
PmaCI CACGTG 2 cut(s) 4244, 5516
PmlI CACGTG 2 cut(s) 4244, 5516
PpsI GAGTC 6 cut(s) 1171, 1959, 2575, 4057, 8179, 8683
Ppu21I YACGTR 3 cut(s) 4244, 5516, 7348
PpuMI RGGWCCY 3 cut(s) 1172, 2135, 6979
PscI ACATGT 3 cut(s) 7732, 7946, 8266
PshBI ATTAAT 1 cut(s) 1127
PsiI TTATAA 3 cut(s) 3227, 3863, 6389
Psp124BI GAGCTC 3 cut(s) 2896, 8315, 8518
Psp5II RGGWCCY 3 cut(s) 1172, 2135, 6979
PspCI CACGTG 2 cut(s) 4244, 5516
PspFI CCCAGC 2 cut(s) 5461, 8628
PspPPI RGGWCCY 3 cut(s) 1172, 2135, 6979
PstI CTGCAG 8 cut(s) 1321, 1336, 4435, 4462, 5512, 7672, 7813, 8845
PstNI CAGNNNCTG 5 cut(s) 182, 1313, 1340, 4469, 7697
PvuII CAGCTG 4 cut(s) 1337, 6221, 7673, 8628
RruI TCGCGA 1 cut(s) 2643
RseI CAYNNNNRTG 9 cut(s) 449, 860, 1913, 2600, 4825, 4889, 4951, 6012, 7362
SacI GAGCTC 3 cut(s) 2896, 8315, 8518
SalI GTCGAC 1 cut(s) 8836
SchI GAGTC 6 cut(s) 1172, 1959, 2576, 4057, 8180, 8684
Sfr274I CTCGAG 1 cut(s) 777
SfuI TTCGAA 1 cut(s) 6866
SinI GGWCC 6 cut(s) 1172, 1220, 1817, 2135, 6286, 6979
SlaI CTCGAG 1 cut(s) 777
SmiMI CAYNNNNRTG 9 cut(s) 449, 860, 1913, 2600, 4825, 4889, 4951, 6012, 7362
SphI GCATGC 5 cut(s) 1547, 2047, 4834, 4888, 7721
SspI AATATT 5 cut(s) 40, 628, 885, 3292, 5632
SstI GAGCTC 3 cut(s) 2896, 8315, 8518
StyI CCWWGG 9 cut(s) 527, 1892, 2279, 3657, 4125, 5502, 6842, 7286, 8022
TaqII GACCGA 1 cut(s) 273
TatI WGTACW 8 cut(s) 82, 896, 1181, 2474, 3218, 4517, 7486, 8131
TauI GCSGC 9 cut(s) 1558, 2101, 4082, 4469, 5140, 5273, 5486, 6311, 8625
TspGWI ACGGA 7 cut(s) 166, 1004, 2404, 4671, 5069, 6638, 7815
Van91I CCANNNNNTGG 1 cut(s) 1113
Vha464I CTTAAG 1 cut(s) 8642
VneI GTGCAC 3 cut(s) 1392, 3414, 6567
VpaK11BI GGWCC 6 cut(s) 1172, 1220, 1817, 2135, 6286, 6979
VspI ATTAAT 1 cut(s) 1127
XbaI TCTAGA 1 cut(s) 1579
XcmI CCANNNNNNNNNTGG 1 cut(s) 3146
XhoI CTCGAG 1 cut(s) 777
XmiI GTMKAC 3 cut(s) 398, 6166, 8837
XmnI GAANNNNTTC 7 cut(s) 804, 2748, 3202, 3759, 6714, 6951, 7182
Zsp2I ATGCAT 6 cut(s) 387, 1549, 4832, 5865, 7687, 7719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.