RchiOBHm_Chr1g0361301
MYB Family

Protein LHY-like isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0001426
Physical Location & Seq
Forward (+)
53303926 .. 53312790
8865 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2328 bp
ATGGACAATTTCTCATCTGGGGAAGATTTGATCGTTAAGGCAAGAAAGCCATATACTATTACCAAGCAGCGAGAGCGGTGGACTGAGGAGGAGCATAATAGGTTTCTTGAAGCCTTGAAGCTCTACGGGCGAGCATGGCAGCGCATTGAAGAACATATAGGAACAAAGACTGCTGTGCAGATCCGAAGTCATGCACAGAAGTTCTTTTCAAAGCTGGAGAAGGAGGCAGGCAGTAAAGGTGTTCCTGTAGGACAATCAATTGACATAGATATTCCGCCTCCACGCCCTAAAAGGAAACCAAGCAATCCTTATCCTCGGAAGTCTAGTGAAGCTGCTCCAACATGGTCCACGTCGCATGTCGGAGCAAAGGATGGAAAACTTGTGTCATCAGCTTCTTCTTCACATTGTAAACAAGCAGTGGACTTGGAGAAAGGACCACTCGATGAGAGATCCAGTGGAGAAGAAAAGCTAAGTTATGGAAAAGAAAACAAAGATGAAAGTTGCTCAGAAGTCTTCACCTTACTCTCAGAGTCTCACTGCTCCTCTGTGTCTTCTGCAAACAAAAGTTCCAAACCTGCACAGGCGGTACTCAGAAATGCTTGCACTTTTAGAGAGTATGTGCCTTCAGTGAAAAAGGTAATCCCTCGAGATGGCAATGAATCTTATGTCACTATTGAACTTAAAGGAAATGAGAATTTGAAGAAAACTGATGCCAAAAAGATAGTTCAAGATAATGCCACAAGTGAAGCCTCAAAGTTGGAGAACACTAATGCTTTTAAGTTGGTTCAAGGTGAGAAAGCAGATGATTTGAATTGTTCATTGCCAACAGATGGGATGCGAAGTACTCCGACCTGCCCGAGGAACGTTCCTATACACATACTGGATGGGAGCGTAGGAGAATGTAATCAAACTACAACCCCAGATTTGTCATTTTCATTCCAGGATTCTGTATTTCATCCTATGGGAAAGATTCGTGTACAGCCTAACCTGTTTACAAATCCAGCTGCATCTACTACTACTACTGAACATGAAAGTAATGTATCAAGATCTTGTATTGACCAATCATTTCCAGCTATTCCACCTCCATTTACCCCATTCCACCACAATCAAGAGGACTACCACTCATCTCTTTCCTCCACATTTTCAAGTCTTATTGTGTCTTCTCTGCTACAAAACCCTGCAGCCCATGCTGCGGCTAGCTTTGCAGCGACATTCTGGCCTTACACGAATGCAGAGAACAAGGAATGTTCTCCAGCATGCTCTGCCGGAGGTTTTCCATCTAGCCAAATGAACTCCCCTCCAAATATGGCAGCAATTGCTGCTGCGACTGTAGCTGCAGCAACTGCATGGTGGGCAGCCCATGGATTGCTCCCCTTGTGCGCTCCTCTTCAAACTAGCTTTAGCTGTCCTGTGCCCGTGCCCATGACTGGAGTTTCATCAATGGACAATGATCAAGCTCCTGCAGCCGAGACAAAGAAAGGACAGGATTCTCTTCAAGTTCCTTGCTTGCAGGATCAACTGCAGGACCCAGAACAGTCAGAAGCTGTGCAAGAACAACATTCACCTCCAAAATCACCAACCACAACCTCATCAGACTCTGAAAATGGAGGTGCAAAGCCTGATATTGGATCAAAAGCTGATGATAATGAGGACCTAGCAACAACTGAAGTTCAAGATTTGAACAAAGCAAAGAGCAAAAAACAGGTGGACCGTTCTTCATGTGGTTCAAACACAACTTCCTGCAGCGAAGTAGAGACGGATGCATTAGAGAAGCAAGAAAAAGGTGAGGAAGAACTAAAAGAACCTGACATAAACCCAGCTTCTGAGTCTAGTTATCGCCGCACTAGAAGTATAAGCAACATGAGTGATTCTTGGAAAGAGAGACACATGAATGATTCATGGAAAGAAGTCTCTGAAGAGGGGCGAATGGCTTTTCAAGCATTATTCTCAAGAGAGGTATTGCCCCAGAGTTTTTCACCTCCACCTGACCTGAATGATAAGGGGCATCAGGACACTATAGAAGGACAGCAAAATAGTGGTGAGAAAGACGGAAGATCTCTAATGTTAGACCTGAACAGCAAGGCCTGGGCACCATTTTGTCACCCAGAAGTGGAGAAAATTGCATCACCACCAGGAGGGCTCAACGGTGCAGGGGGGCTGTTGACATTAGGCCTGGGATATGGAAAGCTAAAGGCTCGTCGAACAGGATTCAAGCCTTACAAAAGGTGCTCTGTAGAGGCCAATGAGAACAGGGTGGCAAATGCCAGCAGCCATTGTGAAGAGAAAGGTCCCAAGAGGCTTCGCTTGGAAGGGGAAGCTTCAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009648 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0010033 GO:0010035 GO:0010038 GO:0010228 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042752 GO:0042754 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043393 GO:0043433 GO:0043496 GO:0043565 GO:0044092 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0046677 GO:0046686 GO:0048511 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048571 GO:0048573 GO:0048574 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051098 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0065009 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
Myb_DNA-binding

Protein Analysis

775

Amino Acids

84.35

Weight (kDa)

5.84

Isoelectric Point (pI)

57.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-binding PF00249 24 - 67 2.6e-13 Myb-like DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 583, 860
AccB1I GGYRCC 1 cut(s) 2089
AccB7I CCANNNNNTGG 1 cut(s) 830
AccBSI CCGCTC 1 cut(s) 76
AciI CCGC 5 cut(s) 76, 275, 584, 1193, 1840
AclI AACGTT 1 cut(s) 864
AclWI GGATC 4 cut(s) 175, 444, 1521, 1636
AcsI RAATTY 1 cut(s) 694
AcuI CTGAAG 3 cut(s) 609, 1686, 1935
AfaI GTAC 3 cut(s) 588, 844, 978
AfiI CCNNNNNNNGG 8 cut(s) 650, 830, 858, 1192, 1427, 1625, 2110, 2135
AjiI CACGTC 1 cut(s) 351
AjnI CCWGG 4 cut(s) 939, 2084, 2131, 2172
Alw21I GWGCWC 1 cut(s) 2231
Alw26I GTCTC 5 cut(s) 537, 1463, 1748, 1876, 1915
AlwI GGATC 4 cut(s) 175, 444, 1521, 1636
AlwNI CAGNNNCTG 4 cut(s) 1343, 1544, 1598, 1823
Ama87I CYCGRG 2 cut(s) 645, 856
AoxI GGCC 4 cut(s) 1217, 2082, 2170, 2238
ApoI RAATTY 1 cut(s) 694
AspLEI GCGC 2 cut(s) 144, 1382
AspS9I GGNCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
AsuHPI GGTGA 9 cut(s) 508, 803, 1554, 1566, 1796, 1968, 2051, 2093, 2118
AsuNHI GCTAGC 1 cut(s) 1196
AvaI CYCGRG 2 cut(s) 645, 856
AvaII GGWCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
BaeGI GKGCMC 3 cut(s) 1416, 1422, 2092
BanI GGYRCC 1 cut(s) 2089
BanII GRGCYC 1 cut(s) 2142
BbsI GAAGAC 3 cut(s) 505, 543, 1152
Bbv12I GWGCWC 1 cut(s) 2231
BccI CCATC 5 cut(s) 365, 644, 824, 878, 1285
BciT130I CCWGG 4 cut(s) 941, 2086, 2133, 2174
BclI TGATCA 1 cut(s) 1450
BcoDI GTCTC 5 cut(s) 537, 1463, 1748, 1876, 1915
BfaI CTAG 7 cut(s) 324, 1197, 1281, 1395, 1655, 1830, 1845
BfmI CTRYAG 9 cut(s) 246, 1179, 1329, 1335, 1461, 1520, 1741, 2016, 2232
BfuAI ACCTGC 2 cut(s) 583, 860
BglII AGATCT 2 cut(s) 1046, 2054
BmcAI AGTACT 1 cut(s) 844
Bme1390I CCNGG 4 cut(s) 941, 2086, 2133, 2174
Bme18I GGWCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
BmeT110I CYCGRG 2 cut(s) 645, 856
BmgBI CACGTC 1 cut(s) 351
BmgT120I GGNCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
BmiI GGNNCC 3 cut(s) 1527, 2091, 2290
BmrFI CCNGG 4 cut(s) 941, 2086, 2133, 2174
BmsI GCATC 6 cut(s) 700, 825, 1016, 1750, 2014, 2132
BmtI GCTAGC 1 cut(s) 1200
BpiI GAAGAC 3 cut(s) 505, 543, 1152
BpmI CTGGAG 3 cut(s) 236, 1236, 1449
BpuEI CTTGAG 1 cut(s) 1933
BsaJI CCNNGG 5 cut(s) 314, 857, 1360, 2085, 2173
Bsc4I CCNNNNNNNGG 8 cut(s) 650, 830, 858, 1192, 1427, 1625, 2110, 2135
Bse1I ACTGG 3 cut(s) 453, 885, 1432
Bse3DI GCAATG 2 cut(s) 661, 818
BseBI CCWGG 4 cut(s) 941, 2086, 2133, 2174
BseDI CCNNGG 5 cut(s) 314, 857, 1360, 2085, 2173
BseGI GGATG 5 cut(s) 376, 840, 889, 955, 1765
BseLI CCNNNNNNNGG 8 cut(s) 650, 830, 858, 1192, 1427, 1625, 2110, 2135
BseMI GCAATG 2 cut(s) 661, 818
BseMII CTCAG 5 cut(s) 75, 519, 540, 604, 1815
BseNI ACTGG 3 cut(s) 453, 885, 1432
BseRI GAGGAG 4 cut(s) 101, 104, 532, 1374
BseSI GKGCMC 3 cut(s) 1416, 1422, 2092
BseYI CCCAGC 1 cut(s) 1816
BsgI GTGCAG 3 cut(s) 197, 561, 2169
BshFI GGCC 4 cut(s) 1219, 2084, 2172, 2240
BshNI GGYRCC 1 cut(s) 2089
BsiHKAI GWGCWC 1 cut(s) 2231
BsiHKCI CYCGRG 2 cut(s) 645, 856
BsiSI CCGG 1 cut(s) 1266
BslFI GGGAC 1 cut(s) 2274
BslI CCNNNNNNNGG 8 cut(s) 650, 830, 858, 1192, 1427, 1625, 2110, 2135
BsmAI GTCTC 5 cut(s) 537, 1463, 1748, 1876, 1915
BsmBI CGTCTC 1 cut(s) 1748
BsmFI GGGAC 1 cut(s) 2274
BsmI GAATGC 1 cut(s) 1234
BsnI GGCC 4 cut(s) 1219, 2084, 2172, 2240
BsoBI CYCGRG 2 cut(s) 645, 856
Bsp1286I GDGCHC 5 cut(s) 1416, 1422, 2092, 2142, 2231
Bsp1407I TGTACA 1 cut(s) 976
Bsp143I GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
Bsp19I CCATGG 1 cut(s) 1360
BspACI CCGC 5 cut(s) 76, 275, 584, 1193, 1840
BspANI GGCC 4 cut(s) 1219, 2084, 2172, 2240
BspCNI CTCAG 5 cut(s) 76, 518, 539, 603, 1816
BspLI GGNNCC 3 cut(s) 1527, 2091, 2290
BspMAI CTGCAG 5 cut(s) 1183, 1339, 1465, 1524, 1745
BspMI ACCTGC 2 cut(s) 583, 860
BspOI GCTAGC 1 cut(s) 1200
BspPI GGATC 4 cut(s) 175, 444, 1521, 1636
BspT107I GGYRCC 1 cut(s) 2089
BsrBI CCGCTC 1 cut(s) 76
BsrDI GCAATG 2 cut(s) 661, 818
BsrGI TGTACA 1 cut(s) 976
BsrI ACTGG 3 cut(s) 453, 885, 1432
BssECI CCNNGG 5 cut(s) 314, 857, 1360, 2085, 2173
BssMI GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
BssT1I CCWWGG 1 cut(s) 1360
Bst2UI CCWGG 4 cut(s) 941, 2086, 2133, 2174
Bst4CI ACNGT 4 cut(s) 1330, 1536, 1712, 2147
Bst6I CTCTTC 4 cut(s) 1392, 1497, 1911, 2274
BstAPI GCANNNNNTGC 5 cut(s) 1187, 1262, 1316, 1319, 1343
BstAUI TGTACA 1 cut(s) 976
BstC8I GCNNGC 7 cut(s) 132, 229, 601, 1198, 1258, 1508, 2266
BstDEI CTNAG 6 cut(s) 84, 470, 505, 526, 590, 1824
BstDSI CCRYGG 1 cut(s) 1360
BstENI CCTNNNNNAGG 1 cut(s) 856
BstF5I GGATG 5 cut(s) 376, 840, 889, 955, 1765
BstHHI GCGC 2 cut(s) 144, 1382
BstKTI GATC 8 cut(s) 33, 183, 452, 1049, 1453, 1516, 1631, 2057
BstMAI GTCTC 5 cut(s) 537, 1463, 1748, 1876, 1915
BstMBI GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
BstNI CCWGG 4 cut(s) 941, 2086, 2133, 2174
BstNSI RCATGY 2 cut(s) 359, 1260
BstSCI CCNGG 4 cut(s) 939, 2084, 2131, 2172
BstSFI CTRYAG 9 cut(s) 246, 1179, 1329, 1335, 1461, 1520, 1741, 2016, 2232
BstSLI GKGCMC 3 cut(s) 1416, 1422, 2092
BstV2I GAAGAC 3 cut(s) 505, 543, 1152
BstX2I RGATCY 4 cut(s) 180, 449, 1046, 2054
BstYI RGATCY 4 cut(s) 180, 449, 1046, 2054
BsuRI GGCC 4 cut(s) 1219, 2084, 2172, 2240
BtgI CCRYGG 1 cut(s) 1360
BtrI CACGTC 1 cut(s) 351
BtsCI GGATG 5 cut(s) 376, 840, 889, 955, 1765
BtsI GCAGTG 2 cut(s) 423, 535
BtsIMutI CAGTG 4 cut(s) 423, 460, 535, 633
BveI ACCTGC 2 cut(s) 583, 860
Cac8I GCNNGC 7 cut(s) 132, 229, 601, 1198, 1258, 1508, 2266
CaiI CAGNNNCTG 4 cut(s) 1343, 1544, 1598, 1823
CfoI GCGC 2 cut(s) 144, 1382
Cfr13I GGNCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
Csp6I GTAC 3 cut(s) 587, 843, 977
CviQI GTAC 3 cut(s) 587, 843, 977
DdeI CTNAG 6 cut(s) 84, 470, 505, 526, 590, 1824
DpnI GATC 8 cut(s) 32, 182, 451, 1048, 1452, 1515, 1630, 2056
DpnII GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
Eam1104I CTCTTC 4 cut(s) 1392, 1497, 1911, 2274
EarI CTCTTC 4 cut(s) 1392, 1497, 1911, 2274
EciI GGCGGA 1 cut(s) 264
Eco130I CCWWGG 1 cut(s) 1360
Eco147I AGGCCT 2 cut(s) 2084, 2172
Eco24I GRGCYC 1 cut(s) 2142
Eco47I GGWCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
Eco57I CTGAAG 3 cut(s) 609, 1686, 1935
Eco88I CYCGRG 2 cut(s) 645, 856
EcoNI CCTNNNNNAGG 1 cut(s) 856
EcoO109I RGGNCCY 3 cut(s) 1525, 1651, 2288
EcoRII CCWGG 4 cut(s) 939, 2084, 2131, 2172
EcoT14I CCWWGG 1 cut(s) 1360
EcoT22I ATGCAT 1 cut(s) 1765
EcoT38I GRGCYC 1 cut(s) 2142
ErhI CCWWGG 1 cut(s) 1360
Esp3I CGTCTC 1 cut(s) 1748
FalI AAGNNNNNCTT 2 cut(s) 292, 324
FaqI GGGAC 1 cut(s) 2274
FbaI TGATCA 1 cut(s) 1450
FokI GGATG 5 cut(s) 383, 847, 896, 942, 1772
FriOI GRGCYC 1 cut(s) 2142
FspBI CTAG 7 cut(s) 324, 1197, 1281, 1395, 1655, 1830, 1845
GlaI GCGC 2 cut(s) 143, 1381
GsaI CCCAGC 1 cut(s) 1820
GsuI CTGGAG 3 cut(s) 236, 1236, 1449
HaeIII GGCC 4 cut(s) 1219, 2084, 2172, 2240
HapII CCGG 1 cut(s) 1266
HhaI GCGC 2 cut(s) 144, 1382
Hin6I GCGC 2 cut(s) 142, 1380
HinP1I GCGC 2 cut(s) 142, 1380
HincII GTYRAC 1 cut(s) 2163
HindII GTYRAC 1 cut(s) 2163
HindIII AAGCTT 1 cut(s) 2316
HpaII CCGG 1 cut(s) 1266
HphI GGTGA 9 cut(s) 508, 803, 1554, 1566, 1796, 1968, 2051, 2093, 2118
Hpy166II GTNNAC 8 cut(s) 81, 348, 410, 421, 977, 993, 1708, 2163
Hpy188III TCNNGA 8 cut(s) 107, 647, 728, 1044, 1109, 1673, 1950, 2009
Hpy8I GTNNAC 8 cut(s) 81, 348, 410, 421, 977, 993, 1708, 2163
Hpy99I CGWCG 2 cut(s) 355, 2202
HpyAV CCTTC 4 cut(s) 214, 633, 2015, 2303
HpyCH4III ACNGT 4 cut(s) 1330, 1536, 1712, 2147
HpyCH4IV ACGT 2 cut(s) 350, 864
HpyF3I CTNAG 6 cut(s) 84, 470, 505, 526, 590, 1824
HpySE526I ACGT 2 cut(s) 350, 864
HspAI GCGC 2 cut(s) 142, 1380
Ksp22I TGATCA 1 cut(s) 1450
Kzo9I GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
LmnI GCTCC 8 cut(s) 91, 340, 362, 545, 888, 1374, 1387, 1462
LweI GCATC 6 cut(s) 700, 825, 1016, 1750, 2014, 2132
MaeI CTAG 7 cut(s) 324, 1197, 1281, 1395, 1655, 1830, 1845
MaeII ACGT 2 cut(s) 350, 864
MaeIII GTNAC 2 cut(s) 667, 2099
MalI GATC 8 cut(s) 32, 182, 451, 1048, 1452, 1515, 1630, 2056
MbiI CCGCTC 1 cut(s) 76
MboI GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
MfeI CAATTG 2 cut(s) 258, 1314
MflI RGATCY 4 cut(s) 180, 449, 1046, 2054
MhlI GDGCHC 5 cut(s) 1416, 1422, 2092, 2142, 2231
MluCI AATT 6 cut(s) 7, 258, 694, 811, 1314, 2118
MlyI GAGTC 3 cut(s) 539, 1589, 1835
MmeI TCCRAC 4 cut(s) 340, 362, 738, 872
Mph1103I ATGCAT 1 cut(s) 1765
MseI TTAA 3 cut(s) 36, 681, 777
MslI CAYNNNNRTG 1 cut(s) 1890
MspA1I CMGCKG 1 cut(s) 1004
MspI CCGG 1 cut(s) 1266
MspR9I CCNGG 4 cut(s) 941, 2086, 2133, 2174
MunI CAATTG 2 cut(s) 258, 1314
Mva1269I GAATGC 1 cut(s) 1234
MvaI CCWGG 4 cut(s) 941, 2086, 2133, 2174
NcoI CCATGG 1 cut(s) 1360
NdeII GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
NheI GCTAGC 1 cut(s) 1196
NlaIV GGNNCC 3 cut(s) 1527, 2091, 2290
NmeAIII GCCGAG 1 cut(s) 1492
NmuCI GTSAC 2 cut(s) 667, 2099
NsiI ATGCAT 1 cut(s) 1765
NspI RCATGY 2 cut(s) 359, 1260
PaeI GCATGC 1 cut(s) 1260
PaeR7I CTCGAG 1 cut(s) 645
PceI AGGCCT 2 cut(s) 2084, 2172
PctI GAATGC 1 cut(s) 1234
PfeI GAWTC 7 cut(s) 659, 944, 970, 1487, 1868, 1895, 2208
PflMI CCANNNNNTGG 1 cut(s) 830
PfoI TCCNGGA 1 cut(s) 939
PleI GAGTC 3 cut(s) 538, 1589, 1834
PpsI GAGTC 3 cut(s) 538, 1589, 1834
PpuMI RGGWCCY 3 cut(s) 1525, 1651, 2288
Psp1406I AACGTT 1 cut(s) 864
Psp5II RGGWCCY 3 cut(s) 1525, 1651, 2288
Psp6I CCWGG 4 cut(s) 939, 2084, 2131, 2172
PspFI CCCAGC 1 cut(s) 1816
PspGI CCWGG 4 cut(s) 939, 2084, 2131, 2172
PspN4I GGNNCC 3 cut(s) 1527, 2091, 2290
PspPI GGNCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
PspPPI RGGWCCY 3 cut(s) 1525, 1651, 2288
PstI CTGCAG 5 cut(s) 1183, 1339, 1465, 1524, 1745
PstNI CAGNNNCTG 4 cut(s) 1343, 1544, 1598, 1823
PsuI RGATCY 4 cut(s) 180, 449, 1046, 2054
PvuII CAGCTG 1 cut(s) 1004
RsaI GTAC 3 cut(s) 588, 844, 978
RsaNI GTAC 3 cut(s) 587, 843, 977
RseI CAYNNNNRTG 1 cut(s) 1890
SaqAI TTAA 3 cut(s) 36, 681, 777
Sau3AI GATC 8 cut(s) 30, 180, 449, 1046, 1450, 1513, 1628, 2054
Sau96I GGNCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
ScaI AGTACT 1 cut(s) 844
SchI GAGTC 3 cut(s) 539, 1589, 1835
ScrFI CCNGG 4 cut(s) 941, 2086, 2133, 2174
SduI GDGCHC 5 cut(s) 1416, 1422, 2092, 2142, 2231
SfaNI GCATC 6 cut(s) 700, 825, 1016, 1750, 2014, 2132
SfcI CTRYAG 9 cut(s) 246, 1179, 1329, 1335, 1461, 1520, 1741, 2016, 2232
Sfr274I CTCGAG 1 cut(s) 645
SinI GGWCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
SlaI CTCGAG 1 cut(s) 645
SmiMI CAYNNNNRTG 1 cut(s) 1890
SmlI CTYRAG 2 cut(s) 645, 1948
SmoI CTYRAG 2 cut(s) 645, 1948
SphI GCATGC 1 cut(s) 1260
Sse9I AATT 6 cut(s) 7, 258, 694, 811, 1314, 2118
SseBI AGGCCT 2 cut(s) 2084, 2172
SsiI CCGC 5 cut(s) 76, 275, 584, 1193, 1840
SspMI CTAG 7 cut(s) 324, 1197, 1281, 1395, 1655, 1830, 1845
StuI AGGCCT 2 cut(s) 2084, 2172
StyD4I CCNGG 4 cut(s) 939, 2084, 2131, 2172
StyI CCWWGG 1 cut(s) 1360
TaaI ACNGT 4 cut(s) 1330, 1536, 1712, 2147
TaiI ACGT 2 cut(s) 353, 867
TaqI TCGA 3 cut(s) 441, 646, 2200
TasI AATT 6 cut(s) 7, 258, 694, 811, 1314, 2118
TatI WGTACW 2 cut(s) 842, 976
TauI GCSGC 2 cut(s) 1196, 1842
TfiI GAWTC 7 cut(s) 659, 944, 970, 1487, 1868, 1895, 2208
Tru1I TTAA 3 cut(s) 36, 681, 777
Tru9I TTAA 3 cut(s) 36, 681, 777
TscAI CASTG 4 cut(s) 423, 460, 542, 633
TseFI GTSAC 2 cut(s) 667, 2099
Tsp45I GTSAC 2 cut(s) 667, 2099
TspGWI ACGGA 2 cut(s) 1772, 2064
TspRI CASTG 4 cut(s) 423, 460, 542, 633
Van91I CCANNNNNTGG 1 cut(s) 830
VpaK11BI GGWCC 6 cut(s) 345, 434, 1525, 1651, 1708, 2288
XagI CCTNNNNNAGG 1 cut(s) 856
XapI RAATTY 1 cut(s) 694
XceI RCATGY 2 cut(s) 359, 1260
XhoI CTCGAG 1 cut(s) 645
XspI CTAG 7 cut(s) 324, 1197, 1281, 1395, 1655, 1830, 1845
ZrmI AGTACT 1 cut(s) 844
Zsp2I ATGCAT 1 cut(s) 1765
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.