Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006501

Physical Location & Seq

Genomic Coordinates Forward (+)

53900590 .. 53906056

Gene Structure 5467 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGCCTCTTGAGCTCTCTCTGTTCCCTCACCTTAGCTTCTCTAAACCTCAACCTCACCCTCCCTCATCAACACCCTACCCTGAAGCTGTGGCTCAAGAAGTACAAAGGAGAGTCAATGCCTCCCTTTCCCGGCGCGAAATGCTGTCCCTCAAGGACCAGCAATGCGCCGTCGGCAACCCCATCGACGACTGCTGGCGCTGCAACTCCAACTGGGCCGACGACCGCCAGAAGCTCGCCGACTGCGGCATCGGCTTCGGCCAAGACGCCATGGGCGGCAAAGGCGGCCAGATCTACGTCGTCACCGACTCCTCCGACCGCGACCCCGCCAACCCAACTCCGGGCACTCTCCGCCACGCCGTGATCCAAACCGAGCCCCTCTGGATCATCTTCTCCGCCGACATGACCATCAAGCTCAAAGTCGAGCTCATCGTCAACAGCTTCAAGACCATCGACGGCCGCGGCGTCAGCGTCCACGTCACCGGCGGCGGATGCATAACCCTCCAGTACGTCTCCAACGTCATCATCCACAACATTCACGTCCACCACTGCAAGCCGGCCGGCAACACCAACGTCGCCTCCAGCCCCACCCACGTCGGCTGGCGCGGGAAGTCCGACGGCGACGGCATCTCCCTCTTCAGCGCCCGCAAAATTTGGATCGACCACTGCTCCCTGTCCTACTGCACCGACGGACTCATCGACGCCATAATGGGGTCCACCGGCATCACGATTTCCAACAACCACTTTGCGCACCACGACGAGGTGATGCTTCTCGGCCACAACGATAAGTACTCGCCGGACACCGGGATGCAGGTGACGATTGCGTTCAACCACTTCGGGGAGGCCCTGGTGCAGCGTATGCCTCGGTGCAGGCTCGGGTATATTCACGTGGTGAACAATGACTTCACGCAGTGGGAGATGTACGCCATCGGCGGCAGCGCCAACCCCACCATTAACAGCCAGGGGAATCGGTACACTGCTCCGATGAACCAGAACGCCAAGGAGGTGACGAAGCGCGTGGACACGAACGAAGGGGATTGGGCGGACTGGAACTGGAGAACGGAGGGGGACATAATGGTAAATGGAGCCTTCTTTGTGCCATCAGGTGCGGGCATGAGCACCCAATACGCTAAGGCCTCGAGCCTCGAGCCCAAGTCGGTGGGTCTCATTGACCGCCTCACCGTCACCGCCGGTGTCTTCGGCGACCCAAGGGACAGTAGTAGGAGCGAATCATACCCTGGATACAGCGGCGGTGGGACCGTAACCGATGGTACCACCAACACCGGCAGTGGAGGGTCCAGCGGCGGTGATGACTATTTTGGAATGATATTCGGGAACACTGCTCAACCATCATCATCTGCAAACGCATTCTTGTTGTCTCTTCTAATTATCTTAATTTTGTATGTTACCACCAGCCATGGTGGTGTATTATCATTACCATTATTCTTAACATTATTATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0009605 GO:0009607 GO:0009814 GO:0009825 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016829 GO:0016835 GO:0016837 GO:0030570 GO:0031224 GO:0031225 GO:0031226 GO:0040007 GO:0042545 GO:0042547 GO:0043207 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0045229 GO:0046658 GO:0050896 GO:0051704 GO:0051707 GO:0071554 GO:0071555 GO:0071840 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C

Protein Analysis

486

Amino Acids

52.52

Weight (kDa)

5.91

Isoelectric Point (pI)

28.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pectate_lyase_4	PF00544	140 - 341	2.3e-21	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006501)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G54920 AT5G04310 AT5G04310 AT5G04310
fragaria_vesca	FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400 FvH4_7g18400
malus_domestica	MD01G1100600.v1.1
prunus_persica	Prupe.2G206100_v2.0.a1 Prupe.2G206100_v2.0.a1
pyrus_communis	pycom01g12750 pycom07g16230
rosa_chinensis	RchiOBHm_Chr1g0362211
rosa_laevigata	RLG00000027666
rosa_multiflora	Rmu_co8314571.1_g000001 Rmu_sc0001237.1_g000010
rosa_roxburghii	Rroxscaffold_4G00294430
rosa_rugosa	Rorug01G0295600 Rorug01G0295700 Rorug01G0295800.1
rosa_samantha	Rh1AG305100 Rh1BG267900 Rh1CG286100 Rh1DG297900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1459
AarI	CACCTGC	1 cut(s)	799
Acc16I	TGCGCA	1 cut(s)	747
Acc36I	ACCTGC	1 cut(s)	799
Acc65I	GGTACC	1 cut(s)	1268
AccB1I	GGYRCC	1 cut(s)	1268
AccII	CGCG	5 cut(s)	135, 318, 459, 603, 1014
AclWI	GGATC	3 cut(s)	355, 389, 662
AcoI	YGGCCR	5 cut(s)	256, 283, 454, 555, 772
AcsI	RAATTY	1 cut(s)	648
AcuI	CTGAAG	2 cut(s)	102, 619
AcvI	CACGTG	1 cut(s)	886
AcyI	GRCGYC	3 cut(s)	264, 462, 699
AdeI	CACNNNGTG	3 cut(s)	358, 889, 909
AfaI	GTAC	6 cut(s)	102, 506, 788, 920, 971, 1270
AfiI	CCNNNNNNNGG	7 cut(s)	129, 337, 338, 708, 757, 800, 835
AgsI	TTSAA	2 cut(s)	442, 826
AjiI	CACGTC	3 cut(s)	475, 538, 592
AjnI	CCWGG	3 cut(s)	843, 957, 1234
AluBI	AGCT	7 cut(s)	13, 36, 86, 232, 412, 424, 438
AluI	AGCT	7 cut(s)	13, 36, 86, 232, 412, 424, 438
Alw21I	GWGCWC	3 cut(s)	15, 426, 1118
Alw26I	GTCTC	3 cut(s)	514, 1166, 1380
AlwI	GGATC	3 cut(s)	355, 389, 662
Ama87I	CYCGRG	3 cut(s)	872, 1135, 1142
AoxI	GGCC	8 cut(s)	213, 256, 283, 454, 555, 772, 840, 1131
ApeKI	GCWGC	3 cut(s)	198, 850, 933
ApoI	RAATTY	1 cut(s)	648
Asp718I	GGTACC	1 cut(s)	1268
AspLEI	GCGC	8 cut(s)	135, 167, 198, 603, 641, 748, 938, 1014
AspS9I	GGNCC	6 cut(s)	154, 213, 711, 841, 1254, 1293
AsuC2I	CCSGG	3 cut(s)	130, 339, 802
AvaI	CYCGRG	3 cut(s)	872, 1135, 1142
AvaII	GGWCC	4 cut(s)	154, 711, 1254, 1293
BaeGI	GKGCMC	1 cut(s)	344
BanI	GGYRCC	1 cut(s)	1268
BanII	GRGCYC	4 cut(s)	15, 375, 426, 1149
BbrPI	CACGTG	1 cut(s)	886
BbsI	GAAGAC	1 cut(s)	1186
Bbv12I	GWGCWC	3 cut(s)	15, 426, 1118
BbvI	GCAGC	3 cut(s)	185, 862, 945
BccI	CCATC	7 cut(s)	188, 413, 455, 932, 1105, 1259, 1354
BceAI	ACGGC	5 cut(s)	152, 341, 469, 631, 637
BcgI	CGANNNNNNTGC	4 cut(s)	163, 197, 235, 269
BciT130I	CCWGG	3 cut(s)	845, 959, 1236
BciVI	GTATCC	1 cut(s)	1232
BcnI	CCSGG	3 cut(s)	130, 339, 802
BcoDI	GTCTC	3 cut(s)	514, 1166, 1380
BfoI	RGCGCY	3 cut(s)	199, 642, 939
BfuAI	ACCTGC	1 cut(s)	799
BfuI	GTATCC	1 cut(s)	1232
BglII	AGATCT	1 cut(s)	288
BmcAI	AGTACT	1 cut(s)	788
Bme1390I	CCNGG	6 cut(s)	130, 339, 802, 845, 959, 1236
Bme18I	GGWCC	4 cut(s)	154, 711, 1254, 1293
BmeT110I	CYCGRG	3 cut(s)	872, 1135, 1142
BmgBI	CACGTC	3 cut(s)	475, 538, 592
BmgT120I	GGNCC	6 cut(s)	154, 213, 711, 841, 1254, 1293
BmiI	GGNNCC	5 cut(s)	712, 1084, 1255, 1270, 1294
BmrFI	CCNGG	6 cut(s)	130, 339, 802, 845, 959, 1236
BmrI	ACTGGG	1 cut(s)	220
BmsI	GCATC	6 cut(s)	255, 479, 633, 729, 753, 795
BmuI	ACTGGG	1 cut(s)	220
BpiI	GAAGAC	1 cut(s)	1186
BpmI	CTGGAG	3 cut(s)	485, 562, 1072
Bpu10I	CCTNAGC	2 cut(s)	32, 1128
BpuEI	CTTGAG	3 cut(s)	29, 78, 134
BpuMI	CCSGG	3 cut(s)	130, 339, 802
BsaAI	YACGTR	1 cut(s)	886
BsaHI	GRCGYC	3 cut(s)	264, 462, 699
BsaI	GGTCTC	1 cut(s)	1166
BsaJI	CCNNGG	9 cut(s)	267, 457, 843, 860, 958, 996, 1205, 1234, 1414
BsaXI	ACNNNNNCTCC	6 cut(s)	560, 590, 611, 641, 650, 680
Bsc4I	CCNNNNNNNGG	7 cut(s)	129, 337, 338, 708, 757, 800, 835
Bse118I	RCCGGY	6 cut(s)	479, 553, 557, 716, 1187, 1280
Bse1I	ACTGG	4 cut(s)	215, 502, 1049, 1055
Bse3DI	GCAATG	1 cut(s)	167
BseBI	CCWGG	3 cut(s)	845, 959, 1236
BseDI	CCNNGG	9 cut(s)	267, 457, 843, 860, 958, 996, 1205, 1234, 1414
BseGI	GGATG	3 cut(s)	494, 522, 810
BseLI	CCNNNNNNNGG	7 cut(s)	129, 337, 338, 708, 757, 800, 835
BseMI	GCAATG	1 cut(s)	167
BseNI	ACTGG	4 cut(s)	215, 502, 1049, 1055
BseRI	GAGGAG	1 cut(s)	298
BseSI	GKGCMC	1 cut(s)	344
BseX3I	CGGCCG	2 cut(s)	454, 555
BseXI	GCAGC	3 cut(s)	185, 862, 945
BsgI	GTGCAG	3 cut(s)	664, 869, 886
Bsh1236I	CGCG	5 cut(s)	135, 318, 459, 603, 1014
Bsh1285I	CGRYCG	4 cut(s)	223, 316, 457, 558
BshFI	GGCC	8 cut(s)	215, 258, 285, 456, 557, 774, 842, 1133
BshNI	GGYRCC	1 cut(s)	1268
BsiEI	CGRYCG	4 cut(s)	223, 316, 457, 558
BsiHKAI	GWGCWC	3 cut(s)	15, 426, 1118
BsiHKCI	CYCGRG	3 cut(s)	872, 1135, 1142
BslFI	GGGAC	4 cut(s)	130, 1079, 1223, 1267
BslI	CCNNNNNNNGG	7 cut(s)	129, 337, 338, 708, 757, 800, 835
BsmAI	GTCTC	3 cut(s)	514, 1166, 1380
BsmBI	CGTCTC	1 cut(s)	514
BsmFI	GGGAC	4 cut(s)	130, 1079, 1223, 1267
BsmI	GAATGC	1 cut(s)	1364
BsnI	GGCC	8 cut(s)	215, 258, 285, 456, 557, 774, 842, 1133
Bso31I	GGTCTC	1 cut(s)	1166
BsoBI	CYCGRG	3 cut(s)	872, 1135, 1142
Bsp1286I	GDGCHC	6 cut(s)	15, 344, 375, 426, 1118, 1149
Bsp143I	GATC	4 cut(s)	288, 360, 381, 654
Bsp19I	CCATGG	2 cut(s)	267, 1414
BspANI	GGCC	8 cut(s)	215, 258, 285, 456, 557, 774, 842, 1133
BspFNI	CGCG	5 cut(s)	135, 318, 459, 603, 1014
BspLI	GGNNCC	5 cut(s)	712, 1084, 1255, 1270, 1294
BspMI	ACCTGC	1 cut(s)	799
BspPI	GGATC	3 cut(s)	355, 389, 662
BspT107I	GGYRCC	1 cut(s)	1268
BspTNI	GGTCTC	1 cut(s)	1166
BsrDI	GCAATG	1 cut(s)	167
BsrFI	RCCGGY	6 cut(s)	479, 553, 557, 716, 1187, 1280
BsrI	ACTGG	4 cut(s)	215, 502, 1049, 1055
BssAI	RCCGGY	6 cut(s)	479, 553, 557, 716, 1187, 1280
BssECI	CCNNGG	9 cut(s)	267, 457, 843, 860, 958, 996, 1205, 1234, 1414
BssMI	GATC	4 cut(s)	288, 360, 381, 654
BssNI	GRCGYC	3 cut(s)	264, 462, 699
BssT1I	CCWWGG	4 cut(s)	267, 996, 1205, 1414
Bst2UI	CCWGG	3 cut(s)	845, 959, 1236
Bst4CI	ACNGT	3 cut(s)	1180, 1214, 1258
Bst6I	CTCTTC	2 cut(s)	638, 1383
BstACI	GRCGYC	3 cut(s)	264, 462, 699
BstAPI	GCANNNNNTGC	1 cut(s)	856
BstBAI	YACGTR	1 cut(s)	886
BstC8I	GCNNGC	9 cut(s)	194, 234, 551, 555, 559, 599, 643, 869, 1108
BstDEI	CTNAG	2 cut(s)	32, 1128
BstDSI	CCRYGG	3 cut(s)	267, 457, 1414
BstF5I	GGATG	3 cut(s)	494, 522, 810
BstFNI	CGCG	5 cut(s)	135, 318, 459, 603, 1014
BstH2I	RGCGCY	3 cut(s)	199, 642, 939
BstHHI	GCGC	8 cut(s)	135, 167, 198, 603, 641, 748, 938, 1014
BstKTI	GATC	4 cut(s)	291, 363, 384, 657
BstMAI	GTCTC	3 cut(s)	514, 1166, 1380
BstMBI	GATC	4 cut(s)	288, 360, 381, 654
BstMCI	CGRYCG	4 cut(s)	223, 316, 457, 558
BstNI	CCWGG	3 cut(s)	845, 959, 1236
BstSCI	CCNGG	6 cut(s)	128, 337, 800, 843, 957, 1234
BstSLI	GKGCMC	1 cut(s)	344
BstUI	CGCG	5 cut(s)	135, 318, 459, 603, 1014
BstV1I	GCAGC	3 cut(s)	185, 862, 945
BstV2I	GAAGAC	1 cut(s)	1186
BstX2I	RGATCY	1 cut(s)	288
BstXI	CCANNNNNNTGG	1 cut(s)	1156
BstYI	RGATCY	1 cut(s)	288
BstZI	CGGCCG	2 cut(s)	454, 555
BsuI	GTATCC	1 cut(s)	1232
BsuRI	GGCC	8 cut(s)	215, 258, 285, 456, 557, 774, 842, 1133
BtgI	CCRYGG	3 cut(s)	267, 457, 1414
BtrI	CACGTC	3 cut(s)	475, 538, 592
BtsCI	GGATG	3 cut(s)	494, 522, 810
BtsI	GCAGTG	6 cut(s)	544, 661, 914, 972, 1291, 1335
BtsIMutI	CAGTG	6 cut(s)	544, 661, 914, 972, 1291, 1335
BveI	ACCTGC	1 cut(s)	799
Cac8I	GCNNGC	9 cut(s)	194, 234, 551, 555, 559, 599, 643, 869, 1108
CfoI	GCGC	8 cut(s)	135, 167, 198, 603, 641, 748, 938, 1014
Cfr10I	RCCGGY	6 cut(s)	479, 553, 557, 716, 1187, 1280
Cfr13I	GGNCC	6 cut(s)	154, 213, 711, 841, 1254, 1293
Cfr42I	CCGCGG	1 cut(s)	460
CseI	GACGC	4 cut(s)	272, 451, 457, 707
Csp6I	GTAC	6 cut(s)	101, 505, 787, 919, 970, 1269
CviAII	CATG	4 cut(s)	268, 400, 1111, 1415
CviQI	GTAC	6 cut(s)	101, 505, 787, 919, 970, 1269
DdeI	CTNAG	2 cut(s)	32, 1128
DpnI	GATC	4 cut(s)	290, 362, 383, 656
DpnII	GATC	4 cut(s)	288, 360, 381, 654
DraIII	CACNNNGTG	3 cut(s)	358, 889, 909
EaeI	YGGCCR	5 cut(s)	256, 283, 454, 555, 772
EagI	CGGCCG	2 cut(s)	454, 555
Eam1104I	CTCTTC	2 cut(s)	638, 1383
EarI	CTCTTC	2 cut(s)	638, 1383
EciI	GGCGGA	4 cut(s)	338, 382, 501, 1055
Ecl136II	GAGCTC	2 cut(s)	13, 424
EclXI	CGGCCG	2 cut(s)	454, 555
Eco130I	CCWWGG	4 cut(s)	267, 996, 1205, 1414
Eco147I	AGGCCT	1 cut(s)	1133
Eco24I	GRGCYC	4 cut(s)	15, 375, 426, 1149
Eco31I	GGTCTC	1 cut(s)	1166
Eco47I	GGWCC	4 cut(s)	154, 711, 1254, 1293
Eco52I	CGGCCG	2 cut(s)	454, 555
Eco53kI	GAGCTC	2 cut(s)	13, 424
Eco57I	CTGAAG	2 cut(s)	102, 619
Eco72I	CACGTG	1 cut(s)	886
Eco88I	CYCGRG	3 cut(s)	872, 1135, 1142
EcoICRI	GAGCTC	2 cut(s)	13, 424
EcoO109I	RGGNCCY	1 cut(s)	841
EcoRII	CCWGG	3 cut(s)	843, 957, 1234
EcoT14I	CCWWGG	4 cut(s)	267, 996, 1205, 1414
EcoT22I	ATGCAT	1 cut(s)	494
EcoT38I	GRGCYC	4 cut(s)	15, 375, 426, 1149
ErhI	CCWWGG	4 cut(s)	267, 996, 1205, 1414
Esp3I	CGTCTC	1 cut(s)	514
FaeI	CATG	4 cut(s)	271, 403, 1114, 1418
FaqI	GGGAC	4 cut(s)	130, 1079, 1223, 1267
FatI	CATG	4 cut(s)	267, 399, 1110, 1414
FauI	CCCGC	4 cut(s)	331, 596, 650, 1099
FokI	GGATG	3 cut(s)	501, 509, 817
FriOI	GRGCYC	4 cut(s)	15, 375, 426, 1149
FspI	TGCGCA	1 cut(s)	747
GlaI	GCGC	8 cut(s)	134, 166, 197, 602, 640, 747, 937, 1013
GsuI	CTGGAG	3 cut(s)	485, 562, 1072
HaeII	RGCGCY	3 cut(s)	199, 642, 939
HaeIII	GGCC	8 cut(s)	215, 258, 285, 456, 557, 774, 842, 1133
HgaI	GACGC	4 cut(s)	272, 451, 457, 707
HhaI	GCGC	8 cut(s)	135, 167, 198, 603, 641, 748, 938, 1014
Hin1I	GRCGYC	3 cut(s)	264, 462, 699
Hin1II	CATG	4 cut(s)	271, 403, 1114, 1418
Hin6I	GCGC	8 cut(s)	133, 165, 196, 601, 639, 746, 936, 1012
HinP1I	GCGC	8 cut(s)	133, 165, 196, 601, 639, 746, 936, 1012
HincII	GTYRAC	1 cut(s)	433
HindII	GTYRAC	1 cut(s)	433
HinfI	GANTC	5 cut(s)	111, 305, 690, 964, 1226
Hpy166II	GTNNAC	7 cut(s)	433, 472, 541, 714, 892, 972, 1018
Hpy188I	TCNGA	3 cut(s)	313, 613, 981
Hpy188III	TCNNGA	6 cut(s)	8, 95, 379, 442, 724, 1330
Hpy8I	GTNNAC	7 cut(s)	433, 472, 541, 714, 892, 972, 1018
HpyAV	CCTTC	2 cut(s)	1022, 1096
HpyCH4III	ACNGT	3 cut(s)	1180, 1214, 1258
HpyCH4IV	ACGT	8 cut(s)	294, 474, 507, 516, 537, 570, 591, 885
HpyCH4V	TGCA	8 cut(s)	201, 492, 549, 681, 808, 850, 867, 1358
HpyF3I	CTNAG	2 cut(s)	32, 1128
HpySE526I	ACGT	8 cut(s)	294, 474, 507, 516, 537, 570, 591, 885
Hsp92I	GRCGYC	3 cut(s)	264, 462, 699
Hsp92II	CATG	4 cut(s)	271, 403, 1114, 1418
HspAI	GCGC	8 cut(s)	133, 165, 196, 601, 639, 746, 936, 1012
KpnI	GGTACC	1 cut(s)	1272
KroI	GCCGGC	2 cut(s)	553, 557
KroNI	GCCGGC	2 cut(s)	555, 559
KspI	CCGCGG	1 cut(s)	460
Kzo9I	GATC	4 cut(s)	288, 360, 381, 654
LmnI	GCTCC	4 cut(s)	671, 982, 1082, 1221
Lsp1109I	GCAGC	3 cut(s)	185, 862, 945
LweI	GCATC	6 cut(s)	255, 479, 633, 729, 753, 795
MaeII	ACGT	8 cut(s)	294, 474, 507, 516, 537, 570, 591, 885
MaeIII	GTNAC	7 cut(s)	298, 475, 811, 1003, 1180, 1258, 1402
MalI	GATC	4 cut(s)	290, 362, 383, 656
MboI	GATC	4 cut(s)	288, 360, 381, 654
MboII	GAAGA	4 cut(s)	379, 625, 1186, 1370
MflI	RGATCY	1 cut(s)	288
MhlI	GDGCHC	6 cut(s)	15, 344, 375, 426, 1118, 1149
MluCI	AATT	3 cut(s)	648, 1383, 1392
MlyI	GAGTC	3 cut(s)	120, 299, 684
MmeI	TCCRAC	5 cut(s)	231, 336, 537, 636, 756
Mph1103I	ATGCAT	1 cut(s)	494
MroNI	GCCGGC	2 cut(s)	553, 557
MseI	TTAA	3 cut(s)	951, 1391, 1445
MslI	CAYNNNNRTG	2 cut(s)	803, 1419
MspA1I	CMGCKG	3 cut(s)	459, 1245, 1299
MspR9I	CCNGG	6 cut(s)	130, 339, 802, 845, 959, 1236
Mva1269I	GAATGC	1 cut(s)	1364
MvaI	CCWGG	3 cut(s)	845, 959, 1236
MvnI	CGCG	5 cut(s)	135, 318, 459, 603, 1014
NaeI	GCCGGC	2 cut(s)	555, 559
NciI	CCSGG	3 cut(s)	130, 339, 802
NcoI	CCATGG	2 cut(s)	267, 1414
NdeII	GATC	4 cut(s)	288, 360, 381, 654
NgoMIV	GCCGGC	2 cut(s)	553, 557
NlaIII	CATG	4 cut(s)	271, 403, 1114, 1418
NlaIV	GGNNCC	5 cut(s)	712, 1084, 1255, 1270, 1294
NmeAIII	GCCGAG	1 cut(s)	750
NmuCI	GTSAC	5 cut(s)	298, 475, 811, 1003, 1180
NsbI	TGCGCA	1 cut(s)	747
NsiI	ATGCAT	1 cut(s)	494
PaeR7I	CTCGAG	2 cut(s)	1135, 1142
PaqCI	CACCTGC	1 cut(s)	799
PceI	AGGCCT	1 cut(s)	1133
PcsI	WCGNNNNNNNCGW	6 cut(s)	300, 426, 459, 513, 693, 777
PctI	GAATGC	1 cut(s)	1364
PdiI	GCCGGC	2 cut(s)	555, 559
PfeI	GAWTC	2 cut(s)	964, 1226
PleI	GAGTC	3 cut(s)	119, 299, 684
PmaCI	CACGTG	1 cut(s)	886
PmlI	CACGTG	1 cut(s)	886
PpsI	GAGTC	3 cut(s)	119, 299, 684
Ppu21I	YACGTR	1 cut(s)	886
PsiI	TTATAA	1 cut(s)	1459
Psp124BI	GAGCTC	2 cut(s)	15, 426
Psp6I	CCWGG	3 cut(s)	843, 957, 1234
PspCI	CACGTG	1 cut(s)	886
PspGI	CCWGG	3 cut(s)	843, 957, 1234
PspN4I	GGNNCC	5 cut(s)	712, 1084, 1255, 1270, 1294
PspPI	GGNCC	6 cut(s)	154, 213, 711, 841, 1254, 1293
PspXI	VCTCGAGB	2 cut(s)	1135, 1142
PsuI	RGATCY	1 cut(s)	288
RsaI	GTAC	6 cut(s)	102, 506, 788, 920, 971, 1270
RsaNI	GTAC	6 cut(s)	101, 505, 787, 919, 970, 1269
RseI	CAYNNNNRTG	2 cut(s)	803, 1419
SacI	GAGCTC	2 cut(s)	15, 426
SacII	CCGCGG	1 cut(s)	460
SaqAI	TTAA	3 cut(s)	951, 1391, 1445
Sau3AI	GATC	4 cut(s)	288, 360, 381, 654
Sau96I	GGNCC	6 cut(s)	154, 213, 711, 841, 1254, 1293
ScaI	AGTACT	1 cut(s)	788
SchI	GAGTC	3 cut(s)	120, 299, 684
ScrFI	CCNGG	6 cut(s)	130, 339, 802, 845, 959, 1236
SduI	GDGCHC	6 cut(s)	15, 344, 375, 426, 1118, 1149
SfaNI	GCATC	6 cut(s)	255, 479, 633, 729, 753, 795
Sfr274I	CTCGAG	2 cut(s)	1135, 1142
Sfr303I	CCGCGG	1 cut(s)	460
SgrAI	CRCCGGYG	2 cut(s)	479, 1187
SgrBI	CCGCGG	1 cut(s)	460
SinI	GGWCC	4 cut(s)	154, 711, 1254, 1293
SlaI	CTCGAG	2 cut(s)	1135, 1142
SmiMI	CAYNNNNRTG	2 cut(s)	803, 1419
SmlI	CTYRAG	5 cut(s)	8, 93, 149, 1135, 1142
SmoI	CTYRAG	5 cut(s)	8, 93, 149, 1135, 1142
Sse9I	AATT	3 cut(s)	648, 1383, 1392
SseBI	AGGCCT	1 cut(s)	1133
SstI	GAGCTC	2 cut(s)	15, 426
StuI	AGGCCT	1 cut(s)	1133
StyD4I	CCNGG	6 cut(s)	128, 337, 800, 843, 957, 1234
StyI	CCWWGG	4 cut(s)	267, 996, 1205, 1414
TaaI	ACNGT	3 cut(s)	1180, 1214, 1258
TaiI	ACGT	8 cut(s)	297, 477, 510, 519, 540, 573, 594, 888
TaqI	TCGA	7 cut(s)	183, 420, 450, 657, 696, 1136, 1143
TasI	AATT	3 cut(s)	648, 1383, 1392
TatI	WGTACW	2 cut(s)	100, 786
TauI	GCSGC	9 cut(s)	246, 276, 285, 459, 462, 486, 933, 1248, 1302
TfiI	GAWTC	2 cut(s)	964, 1226
Tru1I	TTAA	3 cut(s)	951, 1391, 1445
Tru9I	TTAA	3 cut(s)	951, 1391, 1445
TscAI	CASTG	6 cut(s)	551, 668, 914, 979, 1291, 1342
TseFI	GTSAC	5 cut(s)	298, 475, 811, 1003, 1180
TseI	GCWGC	3 cut(s)	198, 850, 933
Tsp45I	GTSAC	5 cut(s)	298, 475, 811, 1003, 1180
TspDTI	ATGAA	1 cut(s)	998
TspGWI	ACGGA	2 cut(s)	702, 1073
TspRI	CASTG	6 cut(s)	551, 668, 914, 979, 1291, 1342
VpaK11BI	GGWCC	4 cut(s)	154, 711, 1254, 1293
XapI	RAATTY	1 cut(s)	648
XhoI	CTCGAG	2 cut(s)	1135, 1142
ZrmI	AGTACT	1 cut(s)	788
Zsp2I	ATGCAT	1 cut(s)	494

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.