RchiOBHm_Chr1g0367811

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0002750
Physical Location & Seq
Forward (+)
58050128 .. 58053801
3674 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2202 bp
ATGGTCATGGATCAAGCCTTGAGTGAGTTGTTGGAATTCAGGGATCAAGCTCTTTCGGACTCGATGTATAAGAAACTAGATAGTGGAATCGGGAACGGTAGTGGTTCAAGTAAGGTACTTGGACATAAGTATGCTACTACGGTCCGAGTGCCTCCTACTCAAATTCCTAGTGATTTAGCGCCGCATTTGAGCATGAATTCAGATGGGGATTCACAGGAAGATTGTGATTTTAGTGATGTGGTTCTCAAGTACATTAGCCAGATGCTTATGGAAGAAGATATGGAAGAAAAAACTTGCATGTATCAGGAGTCTGCAGCACTTCATGCTGCAGAGCAATCTTTTTATGAGCTTATTGGGGAGAAGCATCCTCTGCCGCGTGATTTGACTCTGGCTGCTGATCAGAACCATGAAAGCCCAGATGAAAGTCATTCTTTACATTCCAGCTGTTGTAGCACTACCTCTACCAGTACTAGTAGTAGCATTAGGGATTGTGATTTGCGTGAGTTTAAGTCTCTCAATGTTGCTTCTCAGTCATCCCATGCTTCATCACATGGAACCAGTAACATTGTAGATGGGTTTGTGGATTCTCCTGTGAGCACTCTTAGGGTTCCTGACTTTTTCAATGAGACTGATTCAATTATGCAGTTTAAGAAAGGGTTCGAGGAAGCGAGTAAGTTTCTTCCAAATGGTAATAGTCTAATTGTTGATTTGGAGAGTAACACACTGTTGCTTAAAGAGCTGAAGGCAGACGCAACAGATATGCTAGTGAAGGTAGACCAGAAGAATGACAGTGAGTACTCTTCTGCTGGGTCAAGGAGAAAGAAGCATTCTTATCATGACGATGTGCTTTTAGAAGGGGAAAGGAGTAACAAGCAATCATCAGTTTCTACCGAATCAGCTGTGAGTCCGGAAATGTTTGACATGGTTTTGCTAAACTGTGGACAGGGTGAATCTGCTCTTCGCGAAGCTTTGCAGAATGGAACAAAAAAGAACAAACCACAAAATGGTCAGTCAAAGGGGCTGAGTGGTGGAAAATCCCGTGGGAAGAAGCAGGGAGGTAAAAAGGACGTGGTGGATTTGAGAACTCTTTTGACGGTCTGTGCACAAGCTATTGCAGCTGGTGATGAGAGAACTGGCAACGACTTACTTAAGCGGATCAGACAGCATGCTTCTCCGGTGGGAGATGGGATGCAAAGAATGGCTTGCTGTTTTGCTGATGGTCTTGAGGCACGATTGGCTGGATCTGGTACTCAGATTTACAGAGCCCTTATAACCAAGCCAACATCAGCTGCAGATGTCTTGAAGGCTTACCATCTATTTCTCGCCGCTTGTCCATTCAAGAAGCTCTCAAATTTCTTCTCAAATAAGACAATAATGAATGTATCCGAGAAAGCAACAAGGCTCCACATTATTGATTTCGGTATTATGTATGGTTTTCAATGGCCTTGCCTCATACAACGTCTCTCATCTAGGCCTGGTGGCCCTCCAAAGCTCCGAATTACTGGGATCGATTTTCCAAATCCAGGTTTCCGACCAGCGGAAAGGGTTGAGGAGACAGGACGACGCTTAGCAAACTATGCAGAAACTTTTAAAGTTCCATTTGAGTTCAACGCCATAGCACAAAAGTGGGACACCATTCAAATTGAGGATCTTAAACTCGATCGTGATGAGGTGCTTGTTGTGAATTCTATTTACAGACTTAGAAACCTACTTGATGAGACTGTGGTGGTAGAGAGTCCAAGAGATATTGTCCTGAACCTGATAAGGAAGATGAATCCAGATGTCTACATACTTGGAGTTGTAAATGGAGCCTACAGTGCCCCTTTCTTTCTTTCAAGATTTCGTGAGGCTCTCTTCCACTTCTCTACATTGTTTGACATGCTTGACATGTGTGTGCCCCGTGATATTCCAGAGCGGATGTTGATTGAGAGGGAGATATTTGGCCGGGAGGCAATGAATGTCATTGCGTGTGAGGGTTCAGAGAGGATTGAAAGACCAGAAACATACAAGCAGTGGCAGGTGAGGAATCGGAGGGCTGGTCTTACACAACTTCCTTTGAACCAGGAGATCATGAGCATAGCAAAGGACAGATTGCATGCTTACTACCACAAGGATTTTGTAATTGATGAAGATGGCCGGTGGCTCTTGCAGGGATGGAAAGGACGCATTGTCTATGCGCTCTCTTCTTGGAGGGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

733

Amino Acids

82.05

Weight (kDa)

5.94

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 360 - 731 1.5e-121 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1271
AarI CACCTGC 1 cut(s) 2008
Acc36I ACCTGC 1 cut(s) 2008
AccB7I CCANNNNNTGG 1 cut(s) 1004
AccBSI CCGCTC 1 cut(s) 1915
AccI GTMKAC 2 cut(s) 774, 1785
AccII CGCG 2 cut(s) 376, 963
AccIII TCCGGA 1 cut(s) 907
AciI CCGC 6 cut(s) 182, 374, 1153, 1326, 1538, 1915
AclWI GGATC 6 cut(s) 18, 51, 1163, 1249, 1514, 1656
AcoI YGGCCR 2 cut(s) 1942, 2134
AcsI RAATTY 5 cut(s) 35, 162, 196, 1351, 1684
AcuI CTGAAG 1 cut(s) 761
AfaI GTAC 5 cut(s) 117, 251, 469, 797, 1249
AfiI CCNNNNNNNGG 3 cut(s) 1004, 1523, 1537
AflII CTTAAG 1 cut(s) 1148
AflIII ACRYGT 1 cut(s) 1887
AhdI GACNNNNNGTC 1 cut(s) 2168
AhlI ACTAGT 1 cut(s) 470
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 3 cut(s) 1474, 1522, 2061
AleI CACNNNNGTG 1 cut(s) 1624
Alw21I GWGCWC 2 cut(s) 599, 1105
Alw26I GTCTC 5 cut(s) 516, 620, 1466, 1547, 1712
Alw44I GTGCAC 1 cut(s) 1101
AlwI GGATC 6 cut(s) 18, 51, 1163, 1249, 1514, 1656
Aor13HI TCCGGA 1 cut(s) 907
AoxI GGCC 5 cut(s) 1442, 1472, 1480, 1942, 2134
ApaLI GTGCAC 1 cut(s) 1101
ApeKI GCWGC 6 cut(s) 314, 326, 392, 1115, 1289, 2195
ApoI RAATTY 5 cut(s) 35, 162, 196, 1351, 1684
Asp700I GAANNNNTTC 1 cut(s) 656
AspLEI GCGC 2 cut(s) 181, 2179
AspS9I GGNCC 2 cut(s) 142, 1481
AsuC2I CCSGG 1 cut(s) 1946
AsuHPI GGTGA 3 cut(s) 959, 1133, 2032
AvaII GGWCC 1 cut(s) 142
BaeGI GKGCMC 3 cut(s) 1105, 1822, 1899
BanII GRGCYC 1 cut(s) 1267
Bbv12I GWGCWC 2 cut(s) 599, 1105
BbvI GCAGC 6 cut(s) 313, 326, 379, 1127, 1276, 2182
BccI CCATC 7 cut(s) 197, 566, 1178, 1211, 1320, 2126, 2148
BciT130I CCWGG 3 cut(s) 1476, 1524, 2063
BciVI GTATCC 1 cut(s) 1393
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 1946
BcoDI GTCTC 5 cut(s) 516, 620, 1466, 1547, 1712
BcuI ACTAGT 1 cut(s) 470
BfaI CTAG 5 cut(s) 77, 168, 471, 764, 1470
BfmI CTRYAG 4 cut(s) 312, 327, 1290, 1813
BfoI RGCGCY 1 cut(s) 182
BfrI CTTAAG 1 cut(s) 1148
BfuAI ACCTGC 1 cut(s) 2008
BfuI GTATCC 1 cut(s) 1393
BisI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1116, 1290, 1326, 2196
BlpI GCTNAGC 1 cut(s) 1567
BlsI GCNGC 9 cut(s) 183, 316, 328, 375, 394, 1117, 1291, 1327, 2197
BmcAI AGTACT 2 cut(s) 469, 797
Bme1390I CCNGG 4 cut(s) 1476, 1524, 1946, 2063
Bme18I GGWCC 1 cut(s) 142
BmeRI GACNNNNNGTC 1 cut(s) 2168
BmgBI CACGTC 1 cut(s) 1069
BmgT120I GGNCC 2 cut(s) 142, 1481
BmiI GGNNCC 4 cut(s) 556, 609, 1403, 1810
BmrFI CCNGG 4 cut(s) 1476, 1524, 1946, 2063
BmrI ACTGGG 1 cut(s) 1512
BmsI GCATC 3 cut(s) 252, 373, 1179
BmuI ACTGGG 1 cut(s) 1512
Bpu1102I GCTNAGC 1 cut(s) 1567
BpuEI CTTGAG 3 cut(s) 40, 230, 1244
BpuMI CCSGG 1 cut(s) 1946
Bsa29I ATCGAT 1 cut(s) 1509
BsaJI CCNNGG 1 cut(s) 1039
BsaWI WCCGGW 2 cut(s) 907, 1174
BsaXI ACNNNNNCTCC 2 cut(s) 2023, 2053
Bsc4I CCNNNNNNNGG 3 cut(s) 1004, 1523, 1537
Bse118I RCCGGY 1 cut(s) 2136
Bse1I ACTGG 4 cut(s) 465, 558, 1138, 1507
Bse3DI GCAATG 2 cut(s) 1959, 1962
BseAI TCCGGA 1 cut(s) 907
BseBI CCWGG 3 cut(s) 1476, 1524, 2063
BseCI ATCGAT 1 cut(s) 1509
BseDI CCNNGG 1 cut(s) 1039
BseGI GGATG 5 cut(s) 364, 533, 1194, 1923, 2159
BseLI CCNNNNNNNGG 3 cut(s) 1004, 1523, 1537
BseMI GCAATG 2 cut(s) 1959, 1962
BseMII CTCAG 3 cut(s) 542, 1013, 1265
BseNI ACTGG 4 cut(s) 465, 558, 1138, 1507
BseRI GAGGAG 1 cut(s) 1565
BseSI GKGCMC 3 cut(s) 1105, 1822, 1899
BseXI GCAGC 6 cut(s) 313, 326, 379, 1127, 1276, 2182
BseYI CCCAGC 1 cut(s) 806
Bsh1236I CGCG 2 cut(s) 376, 963
Bsh1285I CGRYCG 1 cut(s) 1663
BshFI GGCC 5 cut(s) 1444, 1474, 1482, 1944, 2136
BshVI ATCGAT 1 cut(s) 1509
BsiEI CGRYCG 1 cut(s) 1663
BsiHKAI GWGCWC 2 cut(s) 599, 1105
BsiSI CCGG 4 cut(s) 908, 1175, 1945, 2137
BslFI GGGAC 1 cut(s) 1643
BslI CCNNNNNNNGG 3 cut(s) 1004, 1523, 1537
BsmAI GTCTC 5 cut(s) 516, 620, 1466, 1547, 1712
BsmBI CGTCTC 1 cut(s) 1466
BsmFI GGGAC 1 cut(s) 1643
BsmI GAATGC 1 cut(s) 826
BsnI GGCC 5 cut(s) 1444, 1474, 1482, 1944, 2136
Bsp1286I GDGCHC 5 cut(s) 599, 1105, 1267, 1822, 1899
Bsp13I TCCGGA 1 cut(s) 907
Bsp143I GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
Bsp1720I GCTNAGC 1 cut(s) 1567
Bsp68I TCGCGA 1 cut(s) 963
BspACI CCGC 6 cut(s) 182, 374, 1153, 1326, 1538, 1915
BspANI GGCC 5 cut(s) 1444, 1474, 1482, 1944, 2136
BspCNI CTCAG 3 cut(s) 541, 1014, 1264
BspDI ATCGAT 1 cut(s) 1509
BspEI TCCGGA 1 cut(s) 907
BspFNI CGCG 2 cut(s) 376, 963
BspHI TCATGA 2 cut(s) 835, 2070
BspLI GGNNCC 4 cut(s) 556, 609, 1403, 1810
BspMAI CTGCAG 3 cut(s) 316, 331, 1294
BspMI ACCTGC 1 cut(s) 2008
BspPI GGATC 6 cut(s) 18, 51, 1163, 1249, 1514, 1656
BspQI GCTCTTC 1 cut(s) 963
BspTI CTTAAG 1 cut(s) 1148
BsrBI CCGCTC 1 cut(s) 1915
BsrDI GCAATG 2 cut(s) 1959, 1962
BsrFI RCCGGY 1 cut(s) 2136
BsrI ACTGG 4 cut(s) 465, 558, 1138, 1507
BssAI RCCGGY 1 cut(s) 2136
BssECI CCNNGG 1 cut(s) 1039
BssMI GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
Bst2UI CCWGG 3 cut(s) 1476, 1524, 2063
Bst4CI ACNGT 8 cut(s) 98, 142, 726, 791, 938, 1096, 1723, 1817
Bst6I CTCTTC 4 cut(s) 805, 963, 1859, 2188
BstAFI CTTAAG 1 cut(s) 1148
BstAPI GCANNNNNTGC 3 cut(s) 323, 370, 1577
BstC8I GCNNGC 3 cut(s) 1167, 1204, 2097
BstDEI CTNAG 7 cut(s) 528, 602, 1022, 1251, 1567, 1700, 2199
BstDSI CCRYGG 1 cut(s) 1039
BstF5I GGATG 5 cut(s) 364, 533, 1194, 1923, 2159
BstFNI CGCG 2 cut(s) 376, 963
BstH2I RGCGCY 1 cut(s) 182
BstHHI GCGC 2 cut(s) 181, 2179
BstKTI GATC 9 cut(s) 13, 46, 400, 1158, 1244, 1509, 1651, 1663, 2070
BstMAI GTCTC 5 cut(s) 516, 620, 1466, 1547, 1712
BstMBI GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
BstMCI CGRYCG 1 cut(s) 1663
BstMWI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 736, 1115, 1235, 1577, 1817
BstNI CCWGG 3 cut(s) 1476, 1524, 2063
BstNSI RCATGY 5 cut(s) 301, 1169, 1882, 1891, 2099
BstSCI CCNGG 4 cut(s) 1474, 1522, 1944, 2061
BstSFI CTRYAG 4 cut(s) 312, 327, 1290, 1813
BstSLI GKGCMC 3 cut(s) 1105, 1822, 1899
BstUI CGCG 2 cut(s) 376, 963
BstV1I GCAGC 6 cut(s) 313, 326, 379, 1127, 1276, 2182
BstX2I RGATCY 2 cut(s) 1241, 1648
BstYI RGATCY 2 cut(s) 1241, 1648
Bsu15I ATCGAT 1 cut(s) 1509
BsuI GTATCC 1 cut(s) 1393
BsuRI GGCC 5 cut(s) 1444, 1474, 1482, 1944, 2136
BsuTUI ATCGAT 1 cut(s) 1509
BtgI CCRYGG 1 cut(s) 1039
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 5 cut(s) 364, 533, 1194, 1923, 2159
BtsI GCAGTG 1 cut(s) 2018
BtsIMutI CAGTG 4 cut(s) 722, 796, 1822, 2018
BtuMI TCGCGA 1 cut(s) 963
BveI ACCTGC 1 cut(s) 2008
Cac8I GCNNGC 3 cut(s) 1167, 1204, 2097
CciI TCATGA 2 cut(s) 835, 2070
CfoI GCGC 2 cut(s) 181, 2179
Cfr10I RCCGGY 1 cut(s) 2136
Cfr13I GGNCC 2 cut(s) 142, 1481
ClaI ATCGAT 1 cut(s) 1509
CpoI CGGWCCG 1 cut(s) 142
CseI GACGC 3 cut(s) 758, 1572, 2172
Csp6I GTAC 5 cut(s) 116, 250, 468, 796, 1248
CspI CGGWCCG 1 cut(s) 142
CviQI GTAC 5 cut(s) 116, 250, 468, 796, 1248
DdeI CTNAG 7 cut(s) 528, 602, 1022, 1251, 1567, 1700, 2199
DpnI GATC 9 cut(s) 12, 45, 399, 1157, 1243, 1508, 1650, 1662, 2069
DpnII GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
DraI TTTAAA 1 cut(s) 1591
DriI GACNNNNNGTC 1 cut(s) 2168
EaeI YGGCCR 2 cut(s) 1942, 2134
Eam1104I CTCTTC 4 cut(s) 805, 963, 1859, 2188
Eam1105I GACNNNNNGTC 1 cut(s) 2168
EarI CTCTTC 4 cut(s) 805, 963, 1859, 2188
Eco147I AGGCCT 1 cut(s) 1474
Eco24I GRGCYC 1 cut(s) 1267
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 761
EcoRI GAATTC 3 cut(s) 35, 196, 1684
EcoRII CCWGG 3 cut(s) 1474, 1522, 2061
EcoT38I GRGCYC 1 cut(s) 1267
Esp3I CGTCTC 1 cut(s) 1466
FalI AAGNNNNNCTT 4 cut(s) 415, 447, 1186, 1218
FaqI GGGAC 1 cut(s) 1643
FbaI TGATCA 1 cut(s) 397
FblI GTMKAC 2 cut(s) 774, 1785
Fnu4HI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1116, 1290, 1326, 2196
FokI GGATG 5 cut(s) 351, 520, 1201, 1930, 2166
FriOI GRGCYC 1 cut(s) 1267
Fsp4HI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1116, 1290, 1326, 2196
FspBI CTAG 5 cut(s) 77, 168, 471, 764, 1470
GlaI GCGC 2 cut(s) 180, 2178
GluI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1116, 1290, 1326, 2196
GsaI CCCAGC 1 cut(s) 810
HaeII RGCGCY 1 cut(s) 182
HaeIII GGCC 5 cut(s) 1444, 1474, 1482, 1944, 2136
HapII CCGG 4 cut(s) 908, 1175, 1945, 2137
HgaI GACGC 3 cut(s) 758, 1572, 2172
HhaI GCGC 2 cut(s) 181, 2179
Hin6I GCGC 2 cut(s) 179, 2177
HinP1I GCGC 2 cut(s) 179, 2177
HindIII AAGCTT 1 cut(s) 966
HpaII CCGG 4 cut(s) 908, 1175, 1945, 2137
HphI GGTGA 3 cut(s) 959, 1133, 2032
Hpy166II GTNNAC 4 cut(s) 775, 941, 1103, 1786
Hpy8I GTNNAC 4 cut(s) 775, 941, 1103, 1786
Hpy99I CGWCG 1 cut(s) 1566
HpyAV CCTTC 4 cut(s) 736, 763, 848, 1297
HpyCH4III ACNGT 8 cut(s) 98, 142, 726, 791, 938, 1096, 1723, 1817
HpyCH4IV ACGT 2 cut(s) 1068, 1459
HpyF10VI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 736, 1115, 1235, 1577, 1817
HpyF3I CTNAG 7 cut(s) 528, 602, 1022, 1251, 1567, 1700, 2199
HpySE526I ACGT 2 cut(s) 1068, 1459
HspAI GCGC 2 cut(s) 179, 2177
Kpn2I TCCGGA 1 cut(s) 907
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
LguI GCTCTTC 1 cut(s) 963
LmnI GCTCC 3 cut(s) 1407, 1497, 1808
Lsp1109I GCAGC 6 cut(s) 313, 326, 379, 1127, 1276, 2182
LweI GCATC 3 cut(s) 252, 373, 1179
MaeI CTAG 5 cut(s) 77, 168, 471, 764, 1470
MaeII ACGT 2 cut(s) 1068, 1459
MaeIII GTNAC 3 cut(s) 560, 716, 866
MalI GATC 9 cut(s) 12, 45, 399, 1157, 1243, 1508, 1650, 1662, 2069
MbiI CCGCTC 1 cut(s) 1915
MboI GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
MflI RGATCY 2 cut(s) 1241, 1648
MhlI GDGCHC 5 cut(s) 599, 1105, 1267, 1822, 1899
MlyI GAGTC 5 cut(s) 53, 317, 379, 913, 1744
MmeI TCCRAC 2 cut(s) 12, 1555
MroI TCCGGA 1 cut(s) 907
MroXI GAANNNNTTC 1 cut(s) 656
MseI TTAA 6 cut(s) 507, 648, 732, 1149, 1590, 1653
MslI CAYNNNNRTG 4 cut(s) 129, 840, 1624, 1892
MspA1I CMGCKG 5 cut(s) 444, 899, 1118, 1289, 1538
MspCI CTTAAG 1 cut(s) 1148
MspI CCGG 4 cut(s) 908, 1175, 1945, 2137
MspR9I CCNGG 4 cut(s) 1476, 1524, 1946, 2063
Mva1269I GAATGC 1 cut(s) 826
MvaI CCWGG 3 cut(s) 1476, 1524, 2063
MvnI CGCG 2 cut(s) 376, 963
MwoI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 736, 1115, 1235, 1577, 1817
NciI CCSGG 1 cut(s) 1946
NdeII GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
NlaIV GGNNCC 4 cut(s) 556, 609, 1403, 1810
NruI TCGCGA 1 cut(s) 963
NspI RCATGY 5 cut(s) 301, 1169, 1882, 1891, 2099
OliI CACNNNNGTG 1 cut(s) 1624
PaeI GCATGC 2 cut(s) 1169, 2099
PagI TCATGA 2 cut(s) 835, 2070
PaqCI CACCTGC 1 cut(s) 2008
PceI AGGCCT 1 cut(s) 1474
PciI ACATGT 1 cut(s) 1887
PciSI GCTCTTC 1 cut(s) 963
PctI GAATGC 1 cut(s) 826
PdmI GAANNNNTTC 1 cut(s) 656
PfeI GAWTC 8 cut(s) 87, 209, 584, 632, 893, 950, 1774, 2026
PflMI CCANNNNNTGG 1 cut(s) 1004
PkrI GCNGC 9 cut(s) 183, 316, 328, 375, 394, 1117, 1291, 1327, 2197
Ple19I CGATCG 1 cut(s) 1663
PleI GAGTC 5 cut(s) 53, 316, 379, 912, 1743
PpsI GAGTC 5 cut(s) 53, 316, 379, 912, 1743
PscI ACATGT 1 cut(s) 1887
PsiI TTATAA 1 cut(s) 1271
Psp6I CCWGG 3 cut(s) 1474, 1522, 2061
PspFI CCCAGC 1 cut(s) 806
PspGI CCWGG 3 cut(s) 1474, 1522, 2061
PspN4I GGNNCC 4 cut(s) 556, 609, 1403, 1810
PspPI GGNCC 2 cut(s) 142, 1481
PstI CTGCAG 3 cut(s) 316, 331, 1294
PsuI RGATCY 2 cut(s) 1241, 1648
PvuI CGATCG 1 cut(s) 1663
PvuII CAGCTG 4 cut(s) 444, 899, 1118, 1289
RruI TCGCGA 1 cut(s) 963
RsaI GTAC 5 cut(s) 117, 251, 469, 797, 1249
RsaNI GTAC 5 cut(s) 116, 250, 468, 796, 1248
RseI CAYNNNNRTG 4 cut(s) 129, 840, 1624, 1892
Rsr2I CGGWCCG 1 cut(s) 142
RsrII CGGWCCG 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 963
SaqAI TTAA 6 cut(s) 507, 648, 732, 1149, 1590, 1653
SatI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1116, 1290, 1326, 2196
Sau3AI GATC 9 cut(s) 10, 43, 397, 1155, 1241, 1506, 1648, 1660, 2067
Sau96I GGNCC 2 cut(s) 142, 1481
ScaI AGTACT 2 cut(s) 469, 797
SchI GAGTC 5 cut(s) 53, 317, 379, 913, 1744
ScrFI CCNGG 4 cut(s) 1476, 1524, 1946, 2063
SduI GDGCHC 5 cut(s) 599, 1105, 1267, 1822, 1899
SfaNI GCATC 3 cut(s) 252, 373, 1179
SfcI CTRYAG 4 cut(s) 312, 327, 1290, 1813
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 4 cut(s) 129, 840, 1624, 1892
SmlI CTYRAG 4 cut(s) 19, 245, 1148, 1223
SmoI CTYRAG 4 cut(s) 19, 245, 1148, 1223
SpeI ACTAGT 1 cut(s) 470
SphI GCATGC 2 cut(s) 1169, 2099
SseBI AGGCCT 1 cut(s) 1474
SsiI CCGC 6 cut(s) 182, 374, 1153, 1326, 1538, 1915
SspMI CTAG 5 cut(s) 77, 168, 471, 764, 1470
StuI AGGCCT 1 cut(s) 1474
StyD4I CCNGG 4 cut(s) 1474, 1522, 1944, 2061
TaaI ACNGT 8 cut(s) 98, 142, 726, 791, 938, 1096, 1723, 1817
TaiI ACGT 2 cut(s) 1071, 1462
TaqI TCGA 4 cut(s) 62, 660, 1509, 1659
TatI WGTACW 3 cut(s) 249, 467, 795
TauI GCSGC 3 cut(s) 184, 376, 1328
TfiI GAWTC 8 cut(s) 87, 209, 584, 632, 893, 950, 1774, 2026
Tru1I TTAA 6 cut(s) 507, 648, 732, 1149, 1590, 1653
Tru9I TTAA 6 cut(s) 507, 648, 732, 1149, 1590, 1653
TscAI CASTG 4 cut(s) 729, 796, 1822, 2018
TseI GCWGC 6 cut(s) 314, 326, 392, 1115, 1289, 2195
TspDTI ATGAA 9 cut(s) 209, 311, 423, 435, 534, 1391, 1787, 1970, 2142
TspRI CASTG 4 cut(s) 729, 796, 1822, 2018
Van91I CCANNNNNTGG 1 cut(s) 1004
Vha464I CTTAAG 1 cut(s) 1148
VneI GTGCAC 1 cut(s) 1101
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 5 cut(s) 35, 162, 196, 1351, 1684
XceI RCATGY 5 cut(s) 301, 1169, 1882, 1891, 2099
XmiI GTMKAC 2 cut(s) 774, 1785
XmnI GAANNNNTTC 1 cut(s) 656
XspI CTAG 5 cut(s) 77, 168, 471, 764, 1470
ZrmI AGTACT 2 cut(s) 469, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.