Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0002750

Physical Location & Seq

Genomic Coordinates Forward (+)

37211004 .. 37214350

Gene Structure 3347 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024578

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGACAATGGATCCTCGTCTGCGGAGTTTCTCTGATTCGTTAAATGGAGTTCGATTAAGCAACCGACCTTTTTCCATTCTTTCACATCAGAACATTGTGCCCCAATCCCCATTTAGTAGTCATCCTTTCTTAGGTAGCGATTATAGGGAATTCAATTACCCTAGACCCGATCTAACCCCAAATGATTTATCGTCTGTCTCGAGCTTGAGTCATGAGGAGGAAGATTGTGACTTTTCAGATGAAGTCTTGAAATACATTAACCAGATGCTTATGGAAGAAGACATGGAGGATAAGACTTGCATGCTTCAAGAGTCTTTGGAACTTCAAGCAGCCGAGAAGTCATTCTATGATGTCCTTGGAAAGAAATATCCCCCTTCCCCAGAAGTAAACCATGATTTTTCAGTTCCATATGGTGAGATCCCAGATGATGGTTTCTCGGGAAACAGCAGCAACTATATTACTTCTAGTAGTAGTAACAGTGGTTTCTCTGGAAATGGCAGCAACTATATTACTAGTAGTAGTAACAGTGGTAGCTATTTCAGTGATGGTACCTGGATTCAAAGTCCAGGTGGATATATGTCTCAATTTCAAGGTCTTCCACCTTTTAACATTTCCCATTCATCGTATGGCTCTTCAACTATGGTCAGTAGCCTGGATGGGCTGGTGGAATCTCCTAGTAGCAGTCTTCACGTCCCTGATTTCAGTACTGAGACTCAATCTGTTTGGCAGTTCAATAAGGGGGTTGAAGAGGCTAGTAGGTTTCTTCCTGGTGAGACTAATTTGGTTGTTGATCTTGATGTGAATTGGTTGTCGGCTCAAGCTTTGAAGGTTAGGACTGATGAGGAAGTTGTTAAACCGGAGAAAAAAGATGAAGGGGAGTGTTCTCCCGGTGGTCCAAGGGGGAGGAAGAATCCGTTTAGGGAGGATGATGAGGATGTGGAAGAAAATAGGAGTAGCAAGCAAGCGGCAGTTTCTACTGAATCTACTCTGCGATCAGAGATGTTTGATAAGATTTTGCTTTCTAGCTTAGGGGAGGGTAAACAGCACTTAATATCCAAACGGGAGCAGTTGCAGAATGGAATGATCAAAAGTGTGCCTCAGAAAGAGAAATCCAAAGGATCAAATGGAGGAAAAGGTCGTGGTAAGAAACAAAGTGGTAACAAAAAGGATGTTGTGGATTTGAGAAATCTCCTTATTTCTGTTGCACAAGCAGTTGCAGCTGATGACCATAGGACTGCAAATGAACTGCTGAAGAAGGTGAGGCTGCATTCTTCACCTTTTGGAGATGGGACTCAGAGACTGGCTCATTGCTTTGCTGATGGCCTCGAGGCTCGCTTGGCTGGAACTGGTAGCCAGATCTATAAAGGCTTTGTTAGCAAAAGAACACCTGCTGCTGATGTCTTGAAAGCTTACCATCTTTTCCTTGCTGCTTGTCCATTTACCAAGATATCTAATTTTGTCTCAAACAAGACCATAATGACTTCATCACAAAAATCGATGAGACTCCATGTCATAGATTTTGGTATCCATTATGGTTTCCAGTGGCCTACCCTTTTTCAGAGGATCGCAATGAGGGAGGGTGGACCCCCAAAGCTTCGGATTACTGGAATTGAATTTCCGCAACCAGGATTCCGGCCAGCTGAAGGAGTAGAGGAAACAGGACGTCGCTTGGCAGCTTATGCTGAGACATTCCACGTGCCATTTGAGTACAATGCTATTGCAAAGAAATGGGAAAACATTACACTTGAGGAACTAAAAATTGGAAGGGATGAGTTTCTTGTTGTGAACTGTTTGTATCGGGGTAAGAACTTGCTTGATGAAAGTGTGGCTGTGGACAGTGCTCGAAATAGGGTTCTTAATCTGGTAAGGAGAACTAATCCAGACATTTTCATCCATGGAGTTATTAATGGAGCGTACAACGCCCCCTTCTTTGTCACCAGGTTCCGAGAGGCTTTATTTCATTTTTCTTCAATGTTTGACATGCTCGAAACAGTTGTACCCCGCGAGGATCGGGAGAGGATGGTGATTGAGAAAGAGATAATTGGCAGGGAGGCTTTGAATGTTATAGCTTGTGAGGGATGGGAAAGAGTGGAAAGGCCAGAATCCTACAAGCAGTGGCAGGTCCGCAACTTGAGGGCTGGGTTTGTGCAAATACCTTTCGACAGAGAACTTGTGAAGATGGCGGCTGGGAAAGTGAAATCTAGTTACCACAAGGATTTTGTTATCGATGAAGATGGGCGCTGGCTGTTGCAGGGATGGAAGGGACGGACCATATTTGCCATTTCTGCTTGGAAACCTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

768

Amino Acids

86.09

Weight (kDa)

6.02

Isoelectric Point (pI)

51.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	394 - 765	2.5e-121	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37650 AT2G37650
fragaria_vesca	FvH4_6g13520 FvH4_6g13520 FvH4_6g13520 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720
malus_domestica	MD04G1130400.v1.1 MD12G1143500.v1.1
prunus_persica	Prupe.2G237300_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1
pyrus_communis	pycom04g11860 pycom12g13820
rosa_chinensis	RchiOBHm_Chr1g0367811 RchiOBHm_Chr3g0466391
rosa_laevigata	RLG00000024578 RLG00000027261
rosa_multiflora	Rmu_sc0001791.1_g000005 Rmu_sc0003480.1_g000003 Rmu_sc0010008.1_g000006
rosa_roxburghii	Rroxscaffold_4G00289190 Rroxscaffold_6G00414510
rosa_rugosa	Rorug01G0336900 Rorug01G0337000 Rorug03G0081400
rosa_samantha	Rh1AG344000 Rh1BG306000 Rh1CG321500 Rh1DG338200 Rh3AG128000 Rh3BG149300 Rh3DG150000
rosa_wichuraiana	Rw1G030620 Rw3G012090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1396
AatII	GACGTC	1 cut(s)	1666
AbsI	CCTCGAGG	1 cut(s)	1325
Acc36I	ACCTGC	2 cut(s)	1396, 2110
Acc65I	GGTACC	1 cut(s)	548
AccB1I	GGYRCC	1 cut(s)	548
AccB7I	CCANNNNNTGG	1 cut(s)	428
AccII	CGCG	1 cut(s)	2004
AciI	CCGC	6 cut(s)	22, 965, 1619, 2002, 2125, 2183
AclWI	GGATC	6 cut(s)	5, 18, 412, 1126, 1571, 2016
AcoI	YGGCCR	1 cut(s)	1634
AcsI	RAATTY	2 cut(s)	149, 1613
AcuI	CTGAAG	2 cut(s)	1271, 1662
AcvI	CACGTG	1 cut(s)	1696
AcyI	GRCGYC	1 cut(s)	1663
AfaI	GTAC	5 cut(s)	550, 706, 1709, 1916, 1998
AfiI	CCNNNNNNNGG	4 cut(s)	131, 428, 1625, 1643
AhdI	GACNNNNNGTC	1 cut(s)	1508
AhlI	ACTAGT	1 cut(s)	512
AjiI	CACGTC	1 cut(s)	691
AjnI	CCWGG	6 cut(s)	551, 565, 651, 766, 1624, 1937
AjuI	GAANNNNNNNTTGG	2 cut(s)	1743, 1775
Alw21I	GWGCWC	1 cut(s)	1843
Alw26I	GTCTC	8 cut(s)	202, 585, 704, 767, 1291, 1465, 1495, 1679
AlwI	GGATC	6 cut(s)	5, 18, 412, 1126, 1571, 2016
AlwNI	CAGNNNCTG	1 cut(s)	1300
Ama87I	CYCGRG	3 cut(s)	199, 436, 1325
AoxI	GGCC	4 cut(s)	1321, 1544, 1634, 2096
ApeKI	GCWGC	8 cut(s)	329, 447, 498, 1217, 1264, 1391, 1427, 1673
ApoI	RAATTY	2 cut(s)	149, 1613
AseI	ATTAAT	1 cut(s)	1905
Asp700I	GAANNNNTTC	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	548
AspLEI	GCGC	1 cut(s)	2241
AspS9I	GGNCC	4 cut(s)	893, 1583, 2122, 2268
AsuC2I	CCSGG	1 cut(s)	888
AsuHPI	GGTGA	6 cut(s)	425, 782, 1266, 1270, 1927, 2035
AvaI	CYCGRG	3 cut(s)	199, 436, 1325
AvaII	GGWCC	4 cut(s)	893, 1583, 2122, 2268
BaeGI	GKGCMC	1 cut(s)	102
BaeI	ACNNNNGTAYC	2 cut(s)	1980, 2013
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	548
BbrPI	CACGTG	1 cut(s)	1696
BbsI	GAAGAC	3 cut(s)	285, 587, 677
Bbv12I	GWGCWC	1 cut(s)	1843
BbvI	GCAGC	8 cut(s)	341, 459, 510, 1229, 1251, 1378, 1414, 1685
BciT130I	CCWGG	6 cut(s)	553, 567, 653, 768, 1626, 1939
BciVI	GTATCC	1 cut(s)	1535
BclI	TGATCA	1 cut(s)	1083
BcnI	CCSGG	1 cut(s)	888
BcoDI	GTCTC	8 cut(s)	202, 585, 704, 767, 1291, 1465, 1495, 1679
BcuI	ACTAGT	1 cut(s)	512
BfaI	CTAG	7 cut(s)	162, 465, 513, 675, 753, 1023, 2202
BfoI	RGCGCY	1 cut(s)	2242
BfuAI	ACCTGC	2 cut(s)	1396, 2110
BfuI	GTATCC	1 cut(s)	1535
BglII	AGATCT	1 cut(s)	1356
BmcAI	AGTACT	1 cut(s)	706
Bme1390I	CCNGG	7 cut(s)	553, 567, 653, 768, 888, 1626, 1939
Bme18I	GGWCC	4 cut(s)	893, 1583, 2122, 2268
BmeRI	GACNNNNNGTC	1 cut(s)	1508
BmeT110I	CYCGRG	3 cut(s)	199, 436, 1325
BmgBI	CACGTC	1 cut(s)	691
BmgT120I	GGNCC	4 cut(s)	893, 1583, 2122, 2268
BmiI	GGNNCC	4 cut(s)	12, 550, 1585, 1943
BmrFI	CCNGG	7 cut(s)	553, 567, 653, 768, 888, 1626, 1939
BmsI	GCATC	1 cut(s)	255
BpiI	GAAGAC	3 cut(s)	285, 587, 677
BplI	GAGNNNNNCTC	2 cut(s)	1288, 1320
Bpu10I	CCTNAGC	1 cut(s)	1027
BpuEI	CTTGAG	4 cut(s)	226, 801, 1766, 2152
BpuMI	CCSGG	1 cut(s)	888
Bsa29I	ATCGAT	2 cut(s)	1496, 2226
BsaAI	YACGTR	1 cut(s)	1696
BsaHI	GRCGYC	1 cut(s)	1663
BsaJI	CCNNGG	3 cut(s)	355, 896, 1894
BsaWI	WCCGGW	1 cut(s)	856
Bsc4I	CCNNNNNNNGG	4 cut(s)	131, 428, 1625, 1643
Bse1I	ACTGG	4 cut(s)	1305, 1351, 1540, 1609
Bse3DI	GCAATG	2 cut(s)	1306, 1575
BseBI	CCWGG	6 cut(s)	553, 567, 653, 768, 1626, 1939
BseCI	ATCGAT	2 cut(s)	1496, 2226
BseDI	CCNNGG	3 cut(s)	355, 896, 1894
BseLI	CCNNNNNNNGG	4 cut(s)	131, 428, 1625, 1643
BseMI	GCAATG	2 cut(s)	1306, 1575
BseMII	CTCAG	4 cut(s)	699, 1112, 1307, 1674
BseNI	ACTGG	4 cut(s)	1305, 1351, 1540, 1609
BseRI	GAGGAG	1 cut(s)	230
BseSI	GKGCMC	1 cut(s)	102
BseXI	GCAGC	8 cut(s)	341, 459, 510, 1229, 1251, 1378, 1414, 1685
BseYI	CCCAGC	2 cut(s)	2138, 2186
Bsh1236I	CGCG	1 cut(s)	2004
BshFI	GGCC	4 cut(s)	1323, 1546, 1636, 2098
BshNI	GGYRCC	1 cut(s)	548
BshVI	ATCGAT	2 cut(s)	1496, 2226
BsiHKAI	GWGCWC	1 cut(s)	1843
BsiHKCI	CYCGRG	3 cut(s)	199, 436, 1325
BsiSI	CCGG	3 cut(s)	857, 888, 1633
BslFI	GGGAC	3 cut(s)	677, 1303, 2277
BslI	CCNNNNNNNGG	4 cut(s)	131, 428, 1625, 1643
BsmAI	GTCTC	8 cut(s)	202, 585, 704, 767, 1291, 1465, 1495, 1679
BsmFI	GGGAC	3 cut(s)	677, 1303, 2277
BsmI	GAATGC	1 cut(s)	1267
BsnI	GGCC	4 cut(s)	1323, 1546, 1636, 2098
BsoBI	CYCGRG	3 cut(s)	199, 436, 1325
Bsp1286I	GDGCHC	2 cut(s)	102, 1843
Bsp19I	CCATGG	1 cut(s)	1894
BspACI	CCGC	6 cut(s)	22, 965, 1619, 2002, 2125, 2183
BspANI	GGCC	4 cut(s)	1323, 1546, 1636, 2098
BspCNI	CTCAG	4 cut(s)	700, 1111, 1306, 1675
BspDI	ATCGAT	2 cut(s)	1496, 2226
BspFNI	CGCG	1 cut(s)	2004
BspHI	TCATGA	1 cut(s)	211
BspLI	GGNNCC	4 cut(s)	12, 550, 1585, 1943
BspMI	ACCTGC	2 cut(s)	1396, 2110
BspPI	GGATC	6 cut(s)	5, 18, 412, 1126, 1571, 2016
BspQI	GCTCTTC	1 cut(s)	637
BspT107I	GGYRCC	1 cut(s)	548
BsrDI	GCAATG	2 cut(s)	1306, 1575
BsrI	ACTGG	4 cut(s)	1305, 1351, 1540, 1609
BssECI	CCNNGG	3 cut(s)	355, 896, 1894
BssNI	GRCGYC	1 cut(s)	1663
BssT1I	CCWWGG	3 cut(s)	355, 896, 1894
Bst2UI	CCWGG	6 cut(s)	553, 567, 653, 768, 1626, 1939
Bst4CI	ACNGT	5 cut(s)	479, 527, 1790, 1838, 1993
Bst6I	CTCTTC	2 cut(s)	637, 741
BstACI	GRCGYC	1 cut(s)	1663
BstAPI	GCANNNNNTGC	1 cut(s)	1679
BstBAI	YACGTR	1 cut(s)	1696
BstC8I	GCNNGC	6 cut(s)	302, 959, 963, 1333, 1638, 2243
BstDEI	CTNAG	6 cut(s)	130, 708, 1027, 1098, 1293, 1683
BstDSI	CCRYGG	1 cut(s)	1894
BstENI	CCTNNNNNAGG	1 cut(s)	129
BstFNI	CGCG	1 cut(s)	2004
BstH2I	RGCGCY	1 cut(s)	2242
BstHHI	GCGC	1 cut(s)	2241
BstMAI	GTCTC	8 cut(s)	202, 585, 704, 767, 1291, 1465, 1495, 1679
BstMWI	GCNNNNNNNGC	6 cut(s)	1217, 1337, 1374, 1679, 1919, 2285
BstNI	CCWGG	6 cut(s)	553, 567, 653, 768, 1626, 1939
BstNSI	RCATGY	2 cut(s)	304, 1984
BstSCI	CCNGG	7 cut(s)	551, 565, 651, 766, 886, 1624, 1937
BstSLI	GKGCMC	1 cut(s)	102
BstUI	CGCG	1 cut(s)	2004
BstV1I	GCAGC	8 cut(s)	341, 459, 510, 1229, 1251, 1378, 1414, 1685
BstV2I	GAAGAC	3 cut(s)	285, 587, 677
BstX2I	RGATCY	3 cut(s)	10, 417, 1356
BstYI	RGATCY	3 cut(s)	10, 417, 1356
Bsu15I	ATCGAT	2 cut(s)	1496, 2226
BsuI	GTATCC	1 cut(s)	1535
BsuRI	GGCC	4 cut(s)	1323, 1546, 1636, 2098
BsuTUI	ATCGAT	2 cut(s)	1496, 2226
BtgI	CCRYGG	1 cut(s)	1894
BtrI	CACGTC	1 cut(s)	691
BtsI	GCAGTG	1 cut(s)	2120
BtsIMutI	CAGTG	6 cut(s)	484, 532, 547, 1547, 1843, 2120
BveI	ACCTGC	2 cut(s)	1396, 2110
Cac8I	GCNNGC	6 cut(s)	302, 959, 963, 1333, 1638, 2243
CaiI	CAGNNNCTG	1 cut(s)	1300
CciI	TCATGA	1 cut(s)	211
CfoI	GCGC	1 cut(s)	2241
Cfr13I	GGNCC	4 cut(s)	893, 1583, 2122, 2268
ClaI	ATCGAT	2 cut(s)	1496, 2226
CsiI	ACCWGGT	1 cut(s)	1937
Csp6I	GTAC	5 cut(s)	549, 705, 1708, 1915, 1997
CviAII	CATG	7 cut(s)	212, 283, 301, 392, 1508, 1895, 1981
CviQI	GTAC	5 cut(s)	549, 705, 1708, 1915, 1997
DdeI	CTNAG	6 cut(s)	130, 708, 1027, 1098, 1293, 1683
DriI	GACNNNNNGTC	1 cut(s)	1508
EaeI	YGGCCR	1 cut(s)	1634
Eam1104I	CTCTTC	2 cut(s)	637, 741
Eam1105I	GACNNNNNGTC	1 cut(s)	1508
EarI	CTCTTC	2 cut(s)	637, 741
Eco130I	CCWWGG	3 cut(s)	355, 896, 1894
Eco32I	GATATC	1 cut(s)	1449
Eco47I	GGWCC	4 cut(s)	893, 1583, 2122, 2268
Eco57I	CTGAAG	2 cut(s)	1271, 1662
Eco72I	CACGTG	1 cut(s)	1696
Eco88I	CYCGRG	3 cut(s)	199, 436, 1325
EcoNI	CCTNNNNNAGG	1 cut(s)	129
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	6 cut(s)	551, 565, 651, 766, 1624, 1937
EcoRV	GATATC	1 cut(s)	1449
EcoT14I	CCWWGG	3 cut(s)	355, 896, 1894
ErhI	CCWWGG	3 cut(s)	355, 896, 1894
FaeI	CATG	7 cut(s)	215, 286, 304, 395, 1511, 1898, 1984
FaqI	GGGAC	3 cut(s)	677, 1303, 2277
FatI	CATG	7 cut(s)	211, 282, 300, 391, 1507, 1894, 1980
FauI	CCCGC	1 cut(s)	2009
FauNDI	CATATG	1 cut(s)	409
FbaI	TGATCA	1 cut(s)	1083
FspBI	CTAG	7 cut(s)	162, 465, 513, 675, 753, 1023, 2202
GlaI	GCGC	1 cut(s)	2240
GsaI	CCCAGC	2 cut(s)	2142, 2190
HaeII	RGCGCY	1 cut(s)	2242
HaeIII	GGCC	4 cut(s)	1323, 1546, 1636, 2098
HapII	CCGG	3 cut(s)	857, 888, 1633
HhaI	GCGC	1 cut(s)	2241
Hin1I	GRCGYC	1 cut(s)	1663
Hin1II	CATG	7 cut(s)	215, 286, 304, 395, 1511, 1898, 1984
Hin6I	GCGC	1 cut(s)	2239
HinP1I	GCGC	1 cut(s)	2239
HindIII	AAGCTT	3 cut(s)	819, 1407, 1592
HpaII	CCGG	3 cut(s)	857, 888, 1633
HphI	GGTGA	6 cut(s)	425, 782, 1266, 1270, 1927, 2035
Hpy166II	GTNNAC	5 cut(s)	388, 1040, 1583, 1786, 1834
Hpy188I	TCNGA	9 cut(s)	34, 90, 238, 997, 1101, 1296, 1560, 1599, 1946
Hpy8I	GTNNAC	5 cut(s)	388, 1040, 1583, 1786, 1834
Hpy99I	CGWCG	1 cut(s)	1668
HpyAV	CCTTC	8 cut(s)	384, 820, 866, 1249, 1637, 1758, 1936, 2254
HpyCH4III	ACNGT	5 cut(s)	479, 527, 1790, 1838, 1993
HpyCH4IV	ACGT	3 cut(s)	690, 1663, 1695
HpyCH4V	TGCA	9 cut(s)	300, 1072, 1205, 1217, 1238, 1267, 1721, 2149, 2251
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1217, 1337, 1374, 1679, 1919, 2285
HpyF3I	CTNAG	6 cut(s)	130, 708, 1027, 1098, 1293, 1683
HpySE526I	ACGT	3 cut(s)	690, 1663, 1695
Hsp92I	GRCGYC	1 cut(s)	1663
Hsp92II	CATG	7 cut(s)	215, 286, 304, 395, 1511, 1898, 1984
HspAI	GCGC	1 cut(s)	2239
KpnI	GGTACC	1 cut(s)	552
Ksp22I	TGATCA	1 cut(s)	1083
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	2 cut(s)	1063, 1910
Lsp1109I	GCAGC	8 cut(s)	341, 459, 510, 1229, 1251, 1378, 1414, 1685
LweI	GCATC	1 cut(s)	255
MabI	ACCWGGT	1 cut(s)	1937
MaeI	CTAG	7 cut(s)	162, 465, 513, 675, 753, 1023, 2202
MaeII	ACGT	3 cut(s)	690, 1663, 1695
MaeIII	GTNAC	6 cut(s)	227, 473, 521, 1157, 1933, 2204
MflI	RGATCY	3 cut(s)	10, 417, 1356
MhlI	GDGCHC	2 cut(s)	102, 1843
MlyI	GAGTC	5 cut(s)	217, 320, 706, 1285, 1497
MroXI	GAANNNNTTC	1 cut(s)	341
MseI	TTAA	8 cut(s)	41, 56, 258, 606, 852, 1049, 1857, 1905
MspA1I	CMGCKG	2 cut(s)	1220, 1640
MspI	CCGG	3 cut(s)	857, 888, 1633
MspR9I	CCNGG	7 cut(s)	553, 567, 653, 768, 888, 1626, 1939
Mva1269I	GAATGC	1 cut(s)	1267
MvaI	CCWGG	6 cut(s)	553, 567, 653, 768, 1626, 1939
MvnI	CGCG	1 cut(s)	2004
MwoI	GCNNNNNNNGC	6 cut(s)	1217, 1337, 1374, 1679, 1919, 2285
NciI	CCSGG	1 cut(s)	888
NcoI	CCATGG	1 cut(s)	1894
NdeI	CATATG	1 cut(s)	409
NlaIII	CATG	7 cut(s)	215, 286, 304, 395, 1511, 1898, 1984
NlaIV	GGNNCC	4 cut(s)	12, 550, 1585, 1943
NmeAIII	GCCGAG	1 cut(s)	358
NmuCI	GTSAC	2 cut(s)	227, 1933
NspI	RCATGY	2 cut(s)	304, 1984
PaeI	GCATGC	1 cut(s)	304
PaeR7I	CTCGAG	2 cut(s)	199, 1325
PagI	TCATGA	1 cut(s)	211
PaqCI	CACCTGC	1 cut(s)	1396
PciSI	GCTCTTC	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	1 cut(s)	1267
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	7 cut(s)	35, 556, 668, 910, 980, 1629, 2102
PflMI	CCANNNNNTGG	1 cut(s)	428
PleI	GAGTC	5 cut(s)	216, 319, 706, 1285, 1497
PmaCI	CACGTG	1 cut(s)	1696
PmlI	CACGTG	1 cut(s)	1696
PpsI	GAGTC	5 cut(s)	216, 319, 706, 1285, 1497
Ppu21I	YACGTR	1 cut(s)	1696
PshBI	ATTAAT	1 cut(s)	1905
Psp6I	CCWGG	6 cut(s)	551, 565, 651, 766, 1624, 1937
PspCI	CACGTG	1 cut(s)	1696
PspFI	CCCAGC	2 cut(s)	2138, 2186
PspGI	CCWGG	6 cut(s)	551, 565, 651, 766, 1624, 1937
PspN4I	GGNNCC	4 cut(s)	12, 550, 1585, 1943
PspPI	GGNCC	4 cut(s)	893, 1583, 2122, 2268
PspXI	VCTCGAGB	1 cut(s)	1325
PstNI	CAGNNNCTG	1 cut(s)	1300
PsuI	RGATCY	3 cut(s)	10, 417, 1356
PvuII	CAGCTG	2 cut(s)	1220, 1640
RsaI	GTAC	5 cut(s)	550, 706, 1709, 1916, 1998
RsaNI	GTAC	5 cut(s)	549, 705, 1708, 1915, 1997
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	8 cut(s)	41, 56, 258, 606, 852, 1049, 1857, 1905
Sau96I	GGNCC	4 cut(s)	893, 1583, 2122, 2268
ScaI	AGTACT	1 cut(s)	706
SchI	GAGTC	5 cut(s)	217, 320, 706, 1285, 1497
ScrFI	CCNGG	7 cut(s)	553, 567, 653, 768, 888, 1626, 1939
SduI	GDGCHC	2 cut(s)	102, 1843
SexAI	ACCWGGT	1 cut(s)	1937
SfaNI	GCATC	1 cut(s)	255
Sfr274I	CTCGAG	2 cut(s)	199, 1325
SinI	GGWCC	4 cut(s)	893, 1583, 2122, 2268
SlaI	CTCGAG	2 cut(s)	199, 1325
SmlI	CTYRAG	6 cut(s)	199, 205, 816, 1325, 1745, 2131
SmoI	CTYRAG	6 cut(s)	199, 205, 816, 1325, 1745, 2131
SpeI	ACTAGT	1 cut(s)	512
SphI	GCATGC	1 cut(s)	304
SsiI	CCGC	6 cut(s)	22, 965, 1619, 2002, 2125, 2183
SspMI	CTAG	7 cut(s)	162, 465, 513, 675, 753, 1023, 2202
StyD4I	CCNGG	7 cut(s)	551, 565, 651, 766, 886, 1624, 1937
StyI	CCWWGG	3 cut(s)	355, 896, 1894
TaaI	ACNGT	5 cut(s)	479, 527, 1790, 1838, 1993
TaiI	ACGT	3 cut(s)	693, 1666, 1698
TaqI	TCGA	8 cut(s)	52, 200, 1326, 1496, 1843, 1986, 2160, 2226
TatI	WGTACW	2 cut(s)	704, 1707
TauI	GCSGC	2 cut(s)	968, 2186
TfiI	GAWTC	7 cut(s)	35, 556, 668, 910, 980, 1629, 2102
Tru1I	TTAA	8 cut(s)	41, 56, 258, 606, 852, 1049, 1857, 1905
Tru9I	TTAA	8 cut(s)	41, 56, 258, 606, 852, 1049, 1857, 1905
TscAI	CASTG	6 cut(s)	484, 532, 547, 1547, 1843, 2120
TseFI	GTSAC	2 cut(s)	227, 1933
TseI	GCWGC	8 cut(s)	329, 447, 498, 1217, 1264, 1391, 1427, 1673
Tsp45I	GTSAC	2 cut(s)	227, 1933
TspDTI	ATGAA	9 cut(s)	255, 609, 885, 1257, 1473, 1833, 1879, 1949, 2244
TspGWI	ACGGA	2 cut(s)	903, 2281
TspRI	CASTG	6 cut(s)	484, 532, 547, 1547, 1843, 2120
Van91I	CCANNNNNTGG	1 cut(s)	428
VpaK11BI	GGWCC	4 cut(s)	893, 1583, 2122, 2268
VspI	ATTAAT	1 cut(s)	1905
XagI	CCTNNNNNAGG	1 cut(s)	129
XapI	RAATTY	2 cut(s)	149, 1613
XceI	RCATGY	2 cut(s)	304, 1984
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XhoI	CTCGAG	2 cut(s)	199, 1325
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	7 cut(s)	162, 465, 513, 675, 753, 1023, 2202
ZraI	GACGTC	1 cut(s)	1664
ZrmI	AGTACT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.