Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002750

Physical Location & Seq

Genomic Coordinates Forward (+)

36835826 .. 36838074

Gene Structure 2249 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00414510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGATCCGCGTCTGCGGAGTTTCTCTGATTCTTTAAATGGAGTTCGATCAAGCAACCGGCCTTTTTCCATTCTTTCACATCAGAACATTGTGCCCCAATCCCCATTTAGTAGTCATCCTTTCTTAGGTAGCGATTATAGGGAATTCAATTACCCTAGACCCGATCTAACCCCAAATGATTTATCGTCTGTCTCGAGCTTGAGTCATGAGGAGGAAGATTGTGACTTTTCAGATGAAGTCTTGAAATACATTAACCAGATGCTTATGGAAGAAGACATGGAGGATAAGACTTGCATGCTTCAAGAGTCTTTGGAACTTCAAGCAGCCGAGAAGTCATTCTATGATGTCCTTGGAAAGAAATATCCCCCTTCCCCGGAAGTAAACCATGATTTTTCAGTTACATATGGTGAGATCCCAGATGATGGTTTCTCGGGAAACAGCAGCAACTATATTACTTCCAGTAGTAGTAACAGTGGTAGCTATTTCAGTGATGGTACCTGGATTCAAAGTCCAGGTGGATATATGTCTCAATTTCAAGGTCTTCCACCTTATAACATTTCCCATTCATCGTATGGCTCTTCAACTATGCTCAGTAGCCTGGATGGGCTGGTGGAATCTCCTAGTAGCAGTCTTCACGTCCCTGATTTCAGTACTGAGACTCGATCTGTTTGGCAGTTCAATAAGGGGTTGAAGAGGCTAGTAGCTCAAGCTTTGAAGGTTAGGACTGATGAGGAAGTTGTTAAACCGGAGAAAAAGGATGAAGGGGAGTGTTCTCCCGGTGGTCCAAGGGGGAGGAAGAATCCATATAGGGAGGATGATGAGGATGTGGAAGAAAATAGGAGTAGCAAGCAAGTGGCAGTTTCTACTGAATCTATTCTGCGATCAGAGATGTTTGATAAGATTTTGCTCTGTAGCTTAGGGGAGGGTAAAGAGCACTTAATATCCAAACGCGAGCAGTTGCAGAATGAAATGATCAAAAGTGTGCCACAGAAAGAGAAATCCAAAGGATCAAATGGAGGAAAAGGTCGTGGTAAGAAACAAACTGGCAACAAAAAGGATGTTGTGGATTTGAGAAGTCTCCTTATTACTGTTGCACAAGCAGTTGCAGCTGATGATCATAGGACTGCAAATGAGCTGCTGAAGAAGGTGAGGCTGCATTCTTCGCCTTTTGGAGATGGGACTCAGAGACTGGCTCATTGCTTTGCTGATGGCCTCGAGGCTCGCTTGGCTGGTACTGGTAGCCAGATCTATAAAGGCTTTGTTAGCAAAAGAACACCTGCTGCTGACGTCTTGAAAGCTTACCATCTTTTCCTTGCTGCATGTCCATTTACGAAGATGTCTAATTTTGTCTCAAACAAGACCATAAGGACTTTATCACAAAAAGCGATGAGACTCCATGTCATAGATTTTGGATTCCGGCCAGCTGAAGGAGTAGAGGAAACAGGACGTCGCTTGGCAGCTTATGCTGAGACGTTCCACGTGCCATTTGAGTACAATGCTATTGCAAAGAAATGGGAAAACATCACACTTGAGGAACTAAAAATTGAGAGGGATGAGTTTCTTGTTGTGAACTGTTTGTATCGAGGTAAGAACTTGCTTGATGAAAGTGTGGCTGTGGACAGTGCTCGAAATAGGGTTCTTAATCTGATAAGGAGAACTAATCCAGACATTTTCATCCATGGAGTTATTAATGGAGCGTACAACGCCCCCTTCTTTGTCACCAGGGAGGCTTTGAATGTTATAGCTTGTGAGGGATGGGAAAGAGTGGAAAGGCCAGAATCCTACAAGCAGTGGCAGGTCCGCAACTTGAGGGCTGGGTTTGTGCAAATACCTTTCGACAGAGAACTTGTGAAGCTGGCGGCTTGGAAAGTGAAATCTAGTTACCACAAGGATTTTGTTATCGATGAAGATGGGCGCTGGCTGTTGCAGGGATGGAAGGGACGGACCATATTTGCCATTTCTGCTTGGAAACCTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

659

Amino Acids

74.24

Weight (kDa)

6.36

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	357 - 471	4.4e-30	GRAS domain family
GRAS	PF03514	475 - 575	3.3e-23	GRAS domain family
GRAS	PF03514	572 - 657	8.6e-19	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37650 AT2G37650
fragaria_vesca	FvH4_6g13520 FvH4_6g13520 FvH4_6g13520 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720
malus_domestica	MD04G1130400.v1.1 MD12G1143500.v1.1
prunus_persica	Prupe.2G237300_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1
pyrus_communis	pycom04g11860 pycom12g13820
rosa_chinensis	RchiOBHm_Chr1g0367811 RchiOBHm_Chr3g0466391
rosa_laevigata	RLG00000024578 RLG00000027261
rosa_multiflora	Rmu_sc0001791.1_g000005 Rmu_sc0003480.1_g000003 Rmu_sc0010008.1_g000006
rosa_roxburghii	Rroxscaffold_4G00289190 Rroxscaffold_6G00414510
rosa_rugosa	Rorug01G0336900 Rorug01G0337000 Rorug03G0081400
rosa_samantha	Rh1AG344000 Rh1BG306000 Rh1CG321500 Rh1DG338200 Rh3AG128000 Rh3BG149300 Rh3DG150000
rosa_wichuraiana	Rw1G030620 Rw3G012090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	552
AarI	CACCTGC	1 cut(s)	1285
AatII	GACGTC	2 cut(s)	1290, 1450
AbsI	CCTCGAGG	1 cut(s)	1214
Acc36I	ACCTGC	2 cut(s)	1285, 1786
Acc65I	GGTACC	1 cut(s)	494
AccB1I	GGYRCC	1 cut(s)	494
AccB7I	CCANNNNNTGG	1 cut(s)	422
AccII	CGCG	2 cut(s)	10, 951
AciI	CCGC	4 cut(s)	8, 16, 1801, 1859
AclWI	GGATC	3 cut(s)	12, 406, 1015
AcoI	YGGCCR	1 cut(s)	1418
AcsI	RAATTY	1 cut(s)	143
AcuI	CTGAAG	2 cut(s)	1160, 1446
AcvI	CACGTG	1 cut(s)	1480
AcyI	GRCGYC	2 cut(s)	1287, 1447
AfaI	GTAC	5 cut(s)	496, 652, 1234, 1493, 1700
AfiI	CCNNNNNNNGG	4 cut(s)	125, 373, 422, 1427
AhdI	GACNNNNNGTC	1 cut(s)	1397
AjiI	CACGTC	1 cut(s)	637
AjnI	CCWGG	4 cut(s)	497, 511, 597, 1721
Alw21I	GWGCWC	2 cut(s)	936, 1627
Alw26I	GTCTC	8 cut(s)	196, 531, 650, 1082, 1180, 1354, 1384, 1463
AlwI	GGATC	3 cut(s)	12, 406, 1015
AlwNI	CAGNNNCTG	1 cut(s)	1189
Ama87I	CYCGRG	3 cut(s)	193, 430, 1214
AoxI	GGCC	4 cut(s)	59, 1210, 1418, 1772
ApeKI	GCWGC	8 cut(s)	323, 441, 1106, 1135, 1153, 1280, 1316, 1457
ApoI	RAATTY	1 cut(s)	143
AseI	ATTAAT	1 cut(s)	1689
Asp700I	GAANNNNTTC	2 cut(s)	335, 873
Asp718I	GGTACC	1 cut(s)	494
AspLEI	GCGC	1 cut(s)	1917
AspS9I	GGNCC	3 cut(s)	782, 1798, 1944
AsuC2I	CCSGG	2 cut(s)	374, 777
AsuHPI	GGTGA	3 cut(s)	419, 1159, 1711
AvaI	CYCGRG	3 cut(s)	193, 430, 1214
AvaII	GGWCC	3 cut(s)	782, 1798, 1944
BaeGI	GKGCMC	1 cut(s)	96
BamHI	GGATCC	1 cut(s)	4
BanI	GGYRCC	1 cut(s)	494
BbrPI	CACGTG	1 cut(s)	1480
BbsI	GAAGAC	3 cut(s)	279, 533, 623
Bbv12I	GWGCWC	2 cut(s)	936, 1627
BbvI	GCAGC	8 cut(s)	335, 453, 1118, 1122, 1140, 1267, 1303, 1469
BccI	CCATC	9 cut(s)	416, 485, 596, 1169, 1202, 1311, 1749, 1904, 1926
BciT130I	CCWGG	4 cut(s)	499, 513, 599, 1723
BclI	TGATCA	2 cut(s)	972, 1114
BcnI	CCSGG	2 cut(s)	374, 777
BcoDI	GTCTC	8 cut(s)	196, 531, 650, 1082, 1180, 1354, 1384, 1463
BfaI	CTAG	4 cut(s)	156, 621, 698, 1878
BfmI	CTRYAG	1 cut(s)	910
BfoI	RGCGCY	1 cut(s)	1918
BfuAI	ACCTGC	2 cut(s)	1285, 1786
BglII	AGATCT	1 cut(s)	1245
BisI	GCNGC	9 cut(s)	324, 442, 1107, 1136, 1154, 1281, 1317, 1458, 1860
BlsI	GCNGC	9 cut(s)	325, 443, 1108, 1137, 1155, 1282, 1318, 1459, 1861
BmcAI	AGTACT	1 cut(s)	652
Bme1390I	CCNGG	6 cut(s)	374, 499, 513, 599, 777, 1723
Bme18I	GGWCC	3 cut(s)	782, 1798, 1944
BmeRI	GACNNNNNGTC	1 cut(s)	1397
BmeT110I	CYCGRG	3 cut(s)	193, 430, 1214
BmgBI	CACGTC	1 cut(s)	637
BmgT120I	GGNCC	3 cut(s)	782, 1798, 1944
BmiI	GGNNCC	2 cut(s)	6, 496
BmrFI	CCNGG	6 cut(s)	374, 499, 513, 599, 777, 1723
BmsI	GCATC	1 cut(s)	249
BpiI	GAAGAC	3 cut(s)	279, 533, 623
BplI	GAGNNNNNCTC	2 cut(s)	1177, 1209
Bpu10I	CCTNAGC	1 cut(s)	916
BpuEI	CTTGAG	4 cut(s)	220, 690, 1550, 1828
BpuMI	CCSGG	2 cut(s)	374, 777
Bsa29I	ATCGAT	1 cut(s)	1902
BsaAI	YACGTR	1 cut(s)	1480
BsaHI	GRCGYC	2 cut(s)	1287, 1447
BsaJI	CCNNGG	5 cut(s)	349, 372, 785, 1678, 1722
BsaWI	WCCGGW	1 cut(s)	745
Bsc4I	CCNNNNNNNGG	4 cut(s)	125, 373, 422, 1427
Bse118I	RCCGGY	1 cut(s)	57
Bse1I	ACTGG	4 cut(s)	459, 1048, 1194, 1240
Bse3DI	GCAATG	1 cut(s)	1195
BseBI	CCWGG	4 cut(s)	499, 513, 599, 1723
BseCI	ATCGAT	1 cut(s)	1902
BseDI	CCNNGG	5 cut(s)	349, 372, 785, 1678, 1722
BseLI	CCNNNNNNNGG	4 cut(s)	125, 373, 422, 1427
BseMI	GCAATG	1 cut(s)	1195
BseMII	CTCAG	4 cut(s)	604, 645, 1196, 1458
BseNI	ACTGG	4 cut(s)	459, 1048, 1194, 1240
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	1 cut(s)	96
BseXI	GCAGC	8 cut(s)	335, 453, 1118, 1122, 1140, 1267, 1303, 1469
BseYI	CCCAGC	1 cut(s)	1814
Bsh1236I	CGCG	2 cut(s)	10, 951
BshFI	GGCC	4 cut(s)	61, 1212, 1420, 1774
BshNI	GGYRCC	1 cut(s)	494
BshVI	ATCGAT	1 cut(s)	1902
BsiHKAI	GWGCWC	2 cut(s)	936, 1627
BsiHKCI	CYCGRG	3 cut(s)	193, 430, 1214
BsiSI	CCGG	5 cut(s)	58, 374, 746, 777, 1417
BslFI	GGGAC	3 cut(s)	623, 1192, 1953
BslI	CCNNNNNNNGG	4 cut(s)	125, 373, 422, 1427
BsmAI	GTCTC	8 cut(s)	196, 531, 650, 1082, 1180, 1354, 1384, 1463
BsmBI	CGTCTC	1 cut(s)	1463
BsmFI	GGGAC	3 cut(s)	623, 1192, 1953
BsmI	GAATGC	1 cut(s)	1156
BsnI	GGCC	4 cut(s)	61, 1212, 1420, 1774
BsoBI	CYCGRG	3 cut(s)	193, 430, 1214
Bsp1286I	GDGCHC	3 cut(s)	96, 936, 1627
Bsp19I	CCATGG	1 cut(s)	1678
BspACI	CCGC	4 cut(s)	8, 16, 1801, 1859
BspANI	GGCC	4 cut(s)	61, 1212, 1420, 1774
BspCNI	CTCAG	4 cut(s)	603, 646, 1195, 1459
BspDI	ATCGAT	1 cut(s)	1902
BspFNI	CGCG	2 cut(s)	10, 951
BspHI	TCATGA	1 cut(s)	205
BspLI	GGNNCC	2 cut(s)	6, 496
BspMI	ACCTGC	2 cut(s)	1285, 1786
BspPI	GGATC	3 cut(s)	12, 406, 1015
BspQI	GCTCTTC	1 cut(s)	583
BspT107I	GGYRCC	1 cut(s)	494
BsrDI	GCAATG	1 cut(s)	1195
BsrFI	RCCGGY	1 cut(s)	57
BsrI	ACTGG	4 cut(s)	459, 1048, 1194, 1240
BssAI	RCCGGY	1 cut(s)	57
BssECI	CCNNGG	5 cut(s)	349, 372, 785, 1678, 1722
BssNI	GRCGYC	2 cut(s)	1287, 1447
BssT1I	CCWWGG	3 cut(s)	349, 785, 1678
Bst2UI	CCWGG	4 cut(s)	499, 513, 599, 1723
Bst4CI	ACNGT	4 cut(s)	473, 1090, 1574, 1622
Bst6I	CTCTTC	2 cut(s)	583, 686
BstACI	GRCGYC	2 cut(s)	1287, 1447
BstAPI	GCANNNNNTGC	1 cut(s)	1463
BstBAI	YACGTR	1 cut(s)	1480
BstC8I	GCNNGC	7 cut(s)	296, 848, 953, 1222, 1422, 1857, 1919
BstDEI	CTNAG	6 cut(s)	124, 590, 654, 916, 1182, 1467
BstDSI	CCRYGG	1 cut(s)	1678
BstENI	CCTNNNNNAGG	1 cut(s)	123
BstFNI	CGCG	2 cut(s)	10, 951
BstH2I	RGCGCY	1 cut(s)	1918
BstHHI	GCGC	1 cut(s)	1917
BstMAI	GTCTC	8 cut(s)	196, 531, 650, 1082, 1180, 1354, 1384, 1463
BstMWI	GCNNNNNNNGC	7 cut(s)	1106, 1162, 1226, 1263, 1463, 1703, 1961
BstNI	CCWGG	4 cut(s)	499, 513, 599, 1723
BstNSI	RCATGY	2 cut(s)	298, 1323
BstSCI	CCNGG	6 cut(s)	372, 497, 511, 597, 775, 1721
BstSFI	CTRYAG	1 cut(s)	910
BstSLI	GKGCMC	1 cut(s)	96
BstUI	CGCG	2 cut(s)	10, 951
BstV1I	GCAGC	8 cut(s)	335, 453, 1118, 1122, 1140, 1267, 1303, 1469
BstV2I	GAAGAC	3 cut(s)	279, 533, 623
BstX2I	RGATCY	3 cut(s)	4, 411, 1245
BstYI	RGATCY	3 cut(s)	4, 411, 1245
Bsu15I	ATCGAT	1 cut(s)	1902
BsuRI	GGCC	4 cut(s)	61, 1212, 1420, 1774
BsuTUI	ATCGAT	1 cut(s)	1902
BtgI	CCRYGG	1 cut(s)	1678
BtgZI	GCGATG	1 cut(s)	1400
BtrI	CACGTC	1 cut(s)	637
BtsI	GCAGTG	1 cut(s)	1796
BtsIMutI	CAGTG	4 cut(s)	478, 493, 1627, 1796
BveI	ACCTGC	2 cut(s)	1285, 1786
Cac8I	GCNNGC	7 cut(s)	296, 848, 953, 1222, 1422, 1857, 1919
CaiI	CAGNNNCTG	1 cut(s)	1189
CciI	TCATGA	1 cut(s)	205
CfoI	GCGC	1 cut(s)	1917
Cfr10I	RCCGGY	1 cut(s)	57
Cfr13I	GGNCC	3 cut(s)	782, 1798, 1944
ClaI	ATCGAT	1 cut(s)	1902
Csp6I	GTAC	5 cut(s)	495, 651, 1233, 1492, 1699
CviAII	CATG	7 cut(s)	206, 277, 295, 386, 1320, 1397, 1679
CviQI	GTAC	5 cut(s)	495, 651, 1233, 1492, 1699
DdeI	CTNAG	6 cut(s)	124, 590, 654, 916, 1182, 1467
DraI	TTTAAA	1 cut(s)	36
DriI	GACNNNNNGTC	1 cut(s)	1397
EaeI	YGGCCR	1 cut(s)	1418
Eam1104I	CTCTTC	2 cut(s)	583, 686
Eam1105I	GACNNNNNGTC	1 cut(s)	1397
EarI	CTCTTC	2 cut(s)	583, 686
Eco130I	CCWWGG	3 cut(s)	349, 785, 1678
Eco47I	GGWCC	3 cut(s)	782, 1798, 1944
Eco57I	CTGAAG	2 cut(s)	1160, 1446
Eco72I	CACGTG	1 cut(s)	1480
Eco88I	CYCGRG	3 cut(s)	193, 430, 1214
EcoNI	CCTNNNNNAGG	1 cut(s)	123
EcoRI	GAATTC	1 cut(s)	143
EcoRII	CCWGG	4 cut(s)	497, 511, 597, 1721
EcoT14I	CCWWGG	3 cut(s)	349, 785, 1678
ErhI	CCWWGG	3 cut(s)	349, 785, 1678
Esp3I	CGTCTC	1 cut(s)	1463
FaeI	CATG	7 cut(s)	209, 280, 298, 389, 1323, 1400, 1682
FaqI	GGGAC	3 cut(s)	623, 1192, 1953
FatI	CATG	7 cut(s)	205, 276, 294, 385, 1319, 1396, 1678
FauNDI	CATATG	1 cut(s)	403
FbaI	TGATCA	2 cut(s)	972, 1114
Fnu4HI	GCNGC	9 cut(s)	324, 442, 1107, 1136, 1154, 1281, 1317, 1458, 1860
Fsp4HI	GCNGC	9 cut(s)	324, 442, 1107, 1136, 1154, 1281, 1317, 1458, 1860
FspBI	CTAG	4 cut(s)	156, 621, 698, 1878
GlaI	GCGC	1 cut(s)	1916
GluI	GCNGC	9 cut(s)	324, 442, 1107, 1136, 1154, 1281, 1317, 1458, 1860
GsaI	CCCAGC	1 cut(s)	1818
HaeII	RGCGCY	1 cut(s)	1918
HaeIII	GGCC	4 cut(s)	61, 1212, 1420, 1774
HapII	CCGG	5 cut(s)	58, 374, 746, 777, 1417
HhaI	GCGC	1 cut(s)	1917
Hin1I	GRCGYC	2 cut(s)	1287, 1447
Hin1II	CATG	7 cut(s)	209, 280, 298, 389, 1323, 1400, 1682
Hin6I	GCGC	1 cut(s)	1915
HinP1I	GCGC	1 cut(s)	1915
HindIII	AAGCTT	2 cut(s)	708, 1296
HpaII	CCGG	5 cut(s)	58, 374, 746, 777, 1417
HphI	GGTGA	3 cut(s)	419, 1159, 1711
Hpy166II	GTNNAC	3 cut(s)	382, 1570, 1618
Hpy188I	TCNGA	6 cut(s)	28, 84, 232, 886, 1185, 1647
Hpy188III	TCNNGA	8 cut(s)	193, 206, 241, 302, 432, 1291, 1664, 1977
Hpy8I	GTNNAC	3 cut(s)	382, 1570, 1618
Hpy99I	CGWCG	1 cut(s)	1452
HpyAV	CCTTC	7 cut(s)	378, 709, 755, 1138, 1421, 1720, 1930
HpyCH4III	ACNGT	4 cut(s)	473, 1090, 1574, 1622
HpyCH4IV	ACGT	5 cut(s)	636, 1287, 1447, 1472, 1479
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1106, 1162, 1226, 1263, 1463, 1703, 1961
HpyF3I	CTNAG	6 cut(s)	124, 590, 654, 916, 1182, 1467
HpySE526I	ACGT	5 cut(s)	636, 1287, 1447, 1472, 1479
Hsp92I	GRCGYC	2 cut(s)	1287, 1447
Hsp92II	CATG	7 cut(s)	209, 280, 298, 389, 1323, 1400, 1682
HspAI	GCGC	1 cut(s)	1915
KpnI	GGTACC	1 cut(s)	498
Ksp22I	TGATCA	2 cut(s)	972, 1114
LguI	GCTCTTC	1 cut(s)	583
LmnI	GCTCC	1 cut(s)	1694
Lsp1109I	GCAGC	8 cut(s)	335, 453, 1118, 1122, 1140, 1267, 1303, 1469
LweI	GCATC	1 cut(s)	249
MaeI	CTAG	4 cut(s)	156, 621, 698, 1878
MaeII	ACGT	5 cut(s)	636, 1287, 1447, 1472, 1479
MaeIII	GTNAC	5 cut(s)	221, 397, 467, 1717, 1880
MflI	RGATCY	3 cut(s)	4, 411, 1245
MhlI	GDGCHC	3 cut(s)	96, 936, 1627
MluCI	AATT	5 cut(s)	143, 148, 530, 1342, 1542
MlyI	GAGTC	5 cut(s)	211, 314, 652, 1174, 1386
MroXI	GAANNNNTTC	2 cut(s)	335, 873
MseI	TTAA	6 cut(s)	35, 252, 741, 938, 1641, 1689
MspA1I	CMGCKG	2 cut(s)	1109, 1424
MspI	CCGG	5 cut(s)	58, 374, 746, 777, 1417
MspR9I	CCNGG	6 cut(s)	374, 499, 513, 599, 777, 1723
Mva1269I	GAATGC	1 cut(s)	1156
MvaI	CCWGG	4 cut(s)	499, 513, 599, 1723
MvnI	CGCG	2 cut(s)	10, 951
MwoI	GCNNNNNNNGC	7 cut(s)	1106, 1162, 1226, 1263, 1463, 1703, 1961
NciI	CCSGG	2 cut(s)	374, 777
NcoI	CCATGG	1 cut(s)	1678
NdeI	CATATG	1 cut(s)	403
NlaIII	CATG	7 cut(s)	209, 280, 298, 389, 1323, 1400, 1682
NlaIV	GGNNCC	2 cut(s)	6, 496
NmeAIII	GCCGAG	1 cut(s)	352
NmuCI	GTSAC	2 cut(s)	221, 1717
NspI	RCATGY	2 cut(s)	298, 1323
PaeI	GCATGC	1 cut(s)	298
PaeR7I	CTCGAG	2 cut(s)	193, 1214
PagI	TCATGA	1 cut(s)	205
PaqCI	CACCTGC	1 cut(s)	1285
PciSI	GCTCTTC	1 cut(s)	583
PcsI	WCGNNNNNNNCGW	1 cut(s)	191
PctI	GAATGC	1 cut(s)	1156
PdmI	GAANNNNTTC	2 cut(s)	335, 873
PfeI	GAWTC	7 cut(s)	29, 502, 614, 799, 869, 1413, 1778
PflMI	CCANNNNNTGG	1 cut(s)	422
PkrI	GCNGC	9 cut(s)	325, 443, 1108, 1137, 1155, 1282, 1318, 1459, 1861
PleI	GAGTC	5 cut(s)	210, 313, 652, 1174, 1386
PmaCI	CACGTG	1 cut(s)	1480
PmlI	CACGTG	1 cut(s)	1480
PpsI	GAGTC	5 cut(s)	210, 313, 652, 1174, 1386
Ppu21I	YACGTR	1 cut(s)	1480
PshBI	ATTAAT	1 cut(s)	1689
PsiI	TTATAA	1 cut(s)	552
Psp6I	CCWGG	4 cut(s)	497, 511, 597, 1721
PspCI	CACGTG	1 cut(s)	1480
PspFI	CCCAGC	1 cut(s)	1814
PspGI	CCWGG	4 cut(s)	497, 511, 597, 1721
PspN4I	GGNNCC	2 cut(s)	6, 496
PspPI	GGNCC	3 cut(s)	782, 1798, 1944
PspXI	VCTCGAGB	1 cut(s)	1214
PstNI	CAGNNNCTG	1 cut(s)	1189
PsuI	RGATCY	3 cut(s)	4, 411, 1245
PvuII	CAGCTG	2 cut(s)	1109, 1424
RsaI	GTAC	5 cut(s)	496, 652, 1234, 1493, 1700
RsaNI	GTAC	5 cut(s)	495, 651, 1233, 1492, 1699
SapI	GCTCTTC	1 cut(s)	583
SaqAI	TTAA	6 cut(s)	35, 252, 741, 938, 1641, 1689
SatI	GCNGC	9 cut(s)	324, 442, 1107, 1136, 1154, 1281, 1317, 1458, 1860
Sau96I	GGNCC	3 cut(s)	782, 1798, 1944
ScaI	AGTACT	1 cut(s)	652
SchI	GAGTC	5 cut(s)	211, 314, 652, 1174, 1386
ScrFI	CCNGG	6 cut(s)	374, 499, 513, 599, 777, 1723
SduI	GDGCHC	3 cut(s)	96, 936, 1627
SfaNI	GCATC	1 cut(s)	249
SfcI	CTRYAG	1 cut(s)	910
Sfr274I	CTCGAG	2 cut(s)	193, 1214
SinI	GGWCC	3 cut(s)	782, 1798, 1944
SlaI	CTCGAG	2 cut(s)	193, 1214
SmlI	CTYRAG	6 cut(s)	193, 199, 705, 1214, 1529, 1807
SmoI	CTYRAG	6 cut(s)	193, 199, 705, 1214, 1529, 1807
SphI	GCATGC	1 cut(s)	298
Sse9I	AATT	5 cut(s)	143, 148, 530, 1342, 1542
SsiI	CCGC	4 cut(s)	8, 16, 1801, 1859
SspMI	CTAG	4 cut(s)	156, 621, 698, 1878
StyD4I	CCNGG	6 cut(s)	372, 497, 511, 597, 775, 1721
StyI	CCWWGG	3 cut(s)	349, 785, 1678
TaaI	ACNGT	4 cut(s)	473, 1090, 1574, 1622
TaiI	ACGT	5 cut(s)	639, 1290, 1450, 1475, 1482
TaqI	TCGA	8 cut(s)	46, 194, 661, 1215, 1582, 1627, 1836, 1902
TasI	AATT	5 cut(s)	143, 148, 530, 1342, 1542
TatI	WGTACW	2 cut(s)	650, 1491
TauI	GCSGC	1 cut(s)	1862
TfiI	GAWTC	7 cut(s)	29, 502, 614, 799, 869, 1413, 1778
Tru1I	TTAA	6 cut(s)	35, 252, 741, 938, 1641, 1689
Tru9I	TTAA	6 cut(s)	35, 252, 741, 938, 1641, 1689
TscAI	CASTG	4 cut(s)	478, 493, 1627, 1796
TseFI	GTSAC	2 cut(s)	221, 1717
TseI	GCWGC	8 cut(s)	323, 441, 1106, 1135, 1153, 1280, 1316, 1457
Tsp45I	GTSAC	2 cut(s)	221, 1717
TspDTI	ATGAA	7 cut(s)	249, 555, 774, 981, 1617, 1663, 1920
TspGWI	ACGGA	1 cut(s)	1957
TspRI	CASTG	4 cut(s)	478, 493, 1627, 1796
Van91I	CCANNNNNTGG	1 cut(s)	422
VpaK11BI	GGWCC	3 cut(s)	782, 1798, 1944
VspI	ATTAAT	1 cut(s)	1689
XagI	CCTNNNNNAGG	1 cut(s)	123
XapI	RAATTY	1 cut(s)	143
XceI	RCATGY	2 cut(s)	298, 1323
XcmI	CCANNNNNNNNNTGG	1 cut(s)	569
XhoI	CTCGAG	2 cut(s)	193, 1214
XmnI	GAANNNNTTC	2 cut(s)	335, 873
XspI	CTAG	4 cut(s)	156, 621, 698, 1878
ZraI	GACGTC	2 cut(s)	1288, 1448
ZrmI	AGTACT	1 cut(s)	652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.