Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0002750

Physical Location & Seq

Genomic Coordinates Reverse (-)

12836020 .. 12839508

Gene Structure 3489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG150000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGACAATGGATCCGCGTCTGCGGAGTTTCTCTGATTCTTTAAATGGAGTTCGATTAAGCAACCGACCTTTTTCCATTCTTTCACATCAGAACATTGTGCCCCAATCCCCATTTAGTAGTCATCCTTTCTTAGGTAGCGATTATAGGGAATTCAATTACCCTAGACCTGATCTAACCCCAAATGATTTATCGTCTGTCTCGAGCTTGAGTCATGAGGAGGAAGATTGTGACTTTTCAGATGAAGTCTTGAAATACATTAACCAGATGCTTATGGAAGAAGACATGGAGGATAAGACTTGCATGCTTCAAGAGTCTTTGGAACTTCAAGCAGCCGAGAAGTCATTCTATGATGTCCTTGGAAAGAAATATCCCCCTTCCCCAGAAGTAAACCATGATTTTTCAGTTCCATATGGTGAGATCCCAGATGATGGTTTCTCGGGAAACAGCAGCAACTATATTACTTCTAGTAGTAGTAACAGTGGTTTCTCTGGAAATGGCAGCAGCTATATTACTAGTAGTAGTAACAGTGGTAGCTATTTCAGTGATGGTACCTGGATTCAAAGTCCAGGTGGATATATGTCTCAATTTCAAGGTCTTCCACCTTATAACATTTCCCATTCATCGTATGGCTCTTCAACTATGGTCAGTAGCCTGGATGGGCTGGTGGAATCTCCTAGTAGCAGTCTTCACGTCCCTGATGACACTCGATCTGTTTTGCAGTTCAATAAGGGGGTTGAAGAGGCTAGTAGGTTTCTTCCTGGTGAGACTAATTTGGTTGTTGATCTTGATGTGAATTGGTTGTCGGCTCAAGCTTTGAAGGTTAGGACTGATGAGGAAGTTGTTAAACCGGAGAAAAAGGATGAAGGGGAGTGTTCTTCCTGTGGTCCAAGGGGGAGGAAGAATCCGTATAGGGAGGATGATGAGGATGTGGAAGAAAATAGGAGTAGCAAGCAAGCGGCAGTTTCTACTGAATCTACTCTGCGATCAGAGATGTTTGATAAGATTTTGCTTTGTAGCTTAGGAGAGGGTAAAGAGCACTTAATATCCAAACGGGAGCAGTTGCAGAATGGAATGATCAAAAGTGTGCCTCAGAAAGAGAAATCCAAAGGATCAAATGGAGGAAAAGGTCGTGGTAAGAAACAAAGTGGTAACAAAAAGGATGTTGTGGATTTGAGAAGTCTCCTCATTACTGTTGCACAAGCAGTTGCAGCTGATGATCATAGGACTGCAAATGAGCTGCTGAAGAAGGTGAGGCTGCATTCTTCGCCTTTTGGAGATGGGACTCAGAGACTGGCTCATTGCTTTGCTGATGGCCTCGAGGCTCGCTTGGCTGGTACTGGTAGCCAGATCTATAAAGGCTTTGTTAGCAAAAGAACACCTGCTGCTGATGTCTTGAAAGCTTACCATCTTTTCCTTGCTGCATGTCCATTTACTAAGATGTCTAATTTTGTCTCAAACAAGACCATAATGACTTCATCACAAAAAGCGATGAGACTCCATGTCATAGATTTTGGTATCCATTATGGTTTCCAATGGCCTACCCTTATTCAGAGGATCGCAATGAGGGAGGGTGGACCCCCAAAGCTTCGGATTACTGGAATTGAGTTTCCGCAACCAGGATTCCGGCCAGCTGAAGGGGTAGAGGAAACAGGACGTCGCTTGGCAGCTTATGCTGAGACATTCCACGTGCCATTTGAGTACAATGCTATTGCAAAGAAATGGGAACACATTACACTTGAGGAACTAAAAATTGGAAGGGATGAGTTTCTTGTTGTGAACTGTTTGTATCGGGGTAAGAACTTGCTTGATGAAAGTGTGGCTGTGGACAGTGCTCGAAATAGGGTTCTTAATCTGATAAGGAGAACTAATCCAGACATTTTCATCCATGGAGTTATTAATGGAGCGTACAACGCCCCCTTCTTTGTCACCAGGTTCCGAGAGGCTTTATTTCATTTTTCTTCAATGTTTGACATGCTCGAAACAGTTGTACCCCGCGAGGATCGGGAGAGGATGGTGATTGAGAAAGAGATAATTGGCAGGGAGGCTTTGAATGTTATAGCTTGTGAGGGATGGGAAAGAGTGGAAAGGCCAGAATCCTACAAGCAGTGGCAGGTCCGCAACTTGAGGGCTGGGTTTGTGCAAATACCTTTCGACAGAGAACTTGTGAAGCTGGCGGCTCGGAAAGTGAAATCTAGTTACCACAAGGATTTTGTTATCGATGAAGATGGGCGCTGGCTGTTGCAGGGATGGAAGGGACGGACCATATTTGCCATTTCTGCTTGGAAACCTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

764

Amino Acids

85.83

Weight (kDa)

6.12

Isoelectric Point (pI)

51.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	391 - 762	3.5e-121	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37650 AT2G37650
fragaria_vesca	FvH4_6g13520 FvH4_6g13520 FvH4_6g13520 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720
malus_domestica	MD04G1130400.v1.1 MD12G1143500.v1.1
prunus_persica	Prupe.2G237300_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1
pyrus_communis	pycom04g11860 pycom12g13820
rosa_chinensis	RchiOBHm_Chr1g0367811 RchiOBHm_Chr3g0466391
rosa_laevigata	RLG00000024578 RLG00000027261
rosa_multiflora	Rmu_sc0001791.1_g000005 Rmu_sc0003480.1_g000003 Rmu_sc0010008.1_g000006
rosa_roxburghii	Rroxscaffold_4G00289190 Rroxscaffold_6G00414510
rosa_rugosa	Rorug01G0336900 Rorug01G0337000 Rorug03G0081400
rosa_samantha	Rh1AG344000 Rh1BG306000 Rh1CG321500 Rh1DG338200 Rh3AG128000 Rh3BG149300 Rh3DG150000
rosa_wichuraiana	Rw1G030620 Rw3G012090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	606
AarI	CACCTGC	1 cut(s)	1387
AatII	GACGTC	1 cut(s)	1657
AbsI	CCTCGAGG	1 cut(s)	1316
Acc36I	ACCTGC	2 cut(s)	1387, 2101
Acc65I	GGTACC	1 cut(s)	548
AccB1I	GGYRCC	1 cut(s)	548
AccB7I	CCANNNNNTGG	1 cut(s)	428
AccII	CGCG	2 cut(s)	16, 1995
AciI	CCGC	7 cut(s)	14, 22, 956, 1610, 1993, 2116, 2174
AclWI	GGATC	6 cut(s)	5, 18, 412, 1117, 1562, 2007
AcoI	YGGCCR	1 cut(s)	1625
AcsI	RAATTY	1 cut(s)	149
AcuI	CTGAAG	2 cut(s)	1262, 1653
AcvI	CACGTG	1 cut(s)	1687
AcyI	GRCGYC	1 cut(s)	1654
AfaI	GTAC	5 cut(s)	550, 1336, 1700, 1907, 1989
AfiI	CCNNNNNNNGG	4 cut(s)	131, 428, 1616, 1634
AhdI	GACNNNNNGTC	1 cut(s)	1499
AhlI	ACTAGT	1 cut(s)	512
AjiI	CACGTC	1 cut(s)	691
AjnI	CCWGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
AjuI	GAANNNNNNNTTGG	2 cut(s)	1734, 1766
Alw21I	GWGCWC	2 cut(s)	1038, 1834
Alw26I	GTCTC	8 cut(s)	202, 585, 758, 1184, 1282, 1456, 1486, 1670
AlwI	GGATC	6 cut(s)	5, 18, 412, 1117, 1562, 2007
AlwNI	CAGNNNCTG	1 cut(s)	1291
Ama87I	CYCGRG	3 cut(s)	199, 436, 1316
AoxI	GGCC	4 cut(s)	1312, 1535, 1625, 2087
ApoI	RAATTY	1 cut(s)	149
AseI	ATTAAT	1 cut(s)	1896
Asp700I	GAANNNNTTC	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	548
AspLEI	GCGC	1 cut(s)	2232
AspS9I	GGNCC	4 cut(s)	884, 1574, 2113, 2259
AsuHPI	GGTGA	5 cut(s)	425, 773, 1261, 1918, 2026
AvaI	CYCGRG	3 cut(s)	199, 436, 1316
AvaII	GGWCC	4 cut(s)	884, 1574, 2113, 2259
BaeGI	GKGCMC	1 cut(s)	102
BaeI	ACNNNNGTAYC	2 cut(s)	1971, 2004
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	548
BbrPI	CACGTG	1 cut(s)	1687
BbsI	GAAGAC	3 cut(s)	285, 587, 677
Bbv12I	GWGCWC	2 cut(s)	1038, 1834
BciT130I	CCWGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
BciVI	GTATCC	1 cut(s)	1526
BclI	TGATCA	2 cut(s)	1074, 1216
BcoDI	GTCTC	8 cut(s)	202, 585, 758, 1184, 1282, 1456, 1486, 1670
BcuI	ACTAGT	1 cut(s)	512
BfaI	CTAG	6 cut(s)	162, 465, 513, 675, 744, 2193
BfoI	RGCGCY	1 cut(s)	2233
BfuAI	ACCTGC	2 cut(s)	1387, 2101
BfuI	GTATCC	1 cut(s)	1526
BglII	AGATCT	1 cut(s)	1347
Bme1390I	CCNGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
Bme18I	GGWCC	4 cut(s)	884, 1574, 2113, 2259
BmeRI	GACNNNNNGTC	1 cut(s)	1499
BmeT110I	CYCGRG	3 cut(s)	199, 436, 1316
BmgBI	CACGTC	1 cut(s)	691
BmgT120I	GGNCC	4 cut(s)	884, 1574, 2113, 2259
BmiI	GGNNCC	4 cut(s)	12, 550, 1576, 1934
BmrFI	CCNGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
BmsI	GCATC	1 cut(s)	255
BpiI	GAAGAC	3 cut(s)	285, 587, 677
BplI	GAGNNNNNCTC	2 cut(s)	1279, 1311
Bpu10I	CCTNAGC	1 cut(s)	1018
BpuEI	CTTGAG	4 cut(s)	226, 792, 1757, 2143
Bsa29I	ATCGAT	1 cut(s)	2217
BsaAI	YACGTR	1 cut(s)	1687
BsaHI	GRCGYC	1 cut(s)	1654
BsaJI	CCNNGG	3 cut(s)	355, 887, 1885
BsaWI	WCCGGW	1 cut(s)	847
Bsc4I	CCNNNNNNNGG	4 cut(s)	131, 428, 1616, 1634
Bse1I	ACTGG	3 cut(s)	1296, 1342, 1600
Bse3DI	GCAATG	2 cut(s)	1297, 1566
BseBI	CCWGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
BseCI	ATCGAT	1 cut(s)	2217
BseDI	CCNNGG	3 cut(s)	355, 887, 1885
BseLI	CCNNNNNNNGG	4 cut(s)	131, 428, 1616, 1634
BseMI	GCAATG	2 cut(s)	1297, 1566
BseMII	CTCAG	3 cut(s)	1103, 1298, 1665
BseNI	ACTGG	3 cut(s)	1296, 1342, 1600
BseRI	GAGGAG	2 cut(s)	230, 1172
BseSI	GKGCMC	1 cut(s)	102
BseYI	CCCAGC	1 cut(s)	2129
Bsh1236I	CGCG	2 cut(s)	16, 1995
BshFI	GGCC	4 cut(s)	1314, 1537, 1627, 2089
BshNI	GGYRCC	1 cut(s)	548
BshVI	ATCGAT	1 cut(s)	2217
BsiHKAI	GWGCWC	2 cut(s)	1038, 1834
BsiHKCI	CYCGRG	3 cut(s)	199, 436, 1316
BsiSI	CCGG	2 cut(s)	848, 1624
BslFI	GGGAC	3 cut(s)	677, 1294, 2268
BslI	CCNNNNNNNGG	4 cut(s)	131, 428, 1616, 1634
BsmAI	GTCTC	8 cut(s)	202, 585, 758, 1184, 1282, 1456, 1486, 1670
BsmFI	GGGAC	3 cut(s)	677, 1294, 2268
BsmI	GAATGC	1 cut(s)	1258
BsnI	GGCC	4 cut(s)	1314, 1537, 1627, 2089
BsoBI	CYCGRG	3 cut(s)	199, 436, 1316
Bsp1286I	GDGCHC	3 cut(s)	102, 1038, 1834
Bsp19I	CCATGG	1 cut(s)	1885
BspACI	CCGC	7 cut(s)	14, 22, 956, 1610, 1993, 2116, 2174
BspANI	GGCC	4 cut(s)	1314, 1537, 1627, 2089
BspCNI	CTCAG	3 cut(s)	1102, 1297, 1666
BspDI	ATCGAT	1 cut(s)	2217
BspFNI	CGCG	2 cut(s)	16, 1995
BspHI	TCATGA	1 cut(s)	211
BspLI	GGNNCC	4 cut(s)	12, 550, 1576, 1934
BspMI	ACCTGC	2 cut(s)	1387, 2101
BspPI	GGATC	6 cut(s)	5, 18, 412, 1117, 1562, 2007
BspQI	GCTCTTC	1 cut(s)	637
BspT107I	GGYRCC	1 cut(s)	548
BsrDI	GCAATG	2 cut(s)	1297, 1566
BsrI	ACTGG	3 cut(s)	1296, 1342, 1600
BssECI	CCNNGG	3 cut(s)	355, 887, 1885
BssNI	GRCGYC	1 cut(s)	1654
BssT1I	CCWWGG	3 cut(s)	355, 887, 1885
Bst2UI	CCWGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
Bst4CI	ACNGT	6 cut(s)	479, 527, 1192, 1781, 1829, 1984
Bst6I	CTCTTC	2 cut(s)	637, 732
BstACI	GRCGYC	1 cut(s)	1654
BstAPI	GCANNNNNTGC	1 cut(s)	1670
BstBAI	YACGTR	1 cut(s)	1687
BstC8I	GCNNGC	7 cut(s)	302, 950, 954, 1324, 1629, 2172, 2234
BstDEI	CTNAG	6 cut(s)	130, 1018, 1089, 1284, 1434, 1674
BstDSI	CCRYGG	1 cut(s)	1885
BstENI	CCTNNNNNAGG	1 cut(s)	129
BstFNI	CGCG	2 cut(s)	16, 1995
BstH2I	RGCGCY	1 cut(s)	2233
BstHHI	GCGC	1 cut(s)	2232
BstMAI	GTCTC	8 cut(s)	202, 585, 758, 1184, 1282, 1456, 1486, 1670
BstMWI	GCNNNNNNNGC	7 cut(s)	1208, 1264, 1328, 1365, 1670, 1910, 2276
BstNI	CCWGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
BstNSI	RCATGY	3 cut(s)	304, 1425, 1975
BstSCI	CCNGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
BstSLI	GKGCMC	1 cut(s)	102
BstUI	CGCG	2 cut(s)	16, 1995
BstV2I	GAAGAC	3 cut(s)	285, 587, 677
BstX2I	RGATCY	3 cut(s)	10, 417, 1347
BstYI	RGATCY	3 cut(s)	10, 417, 1347
Bsu15I	ATCGAT	1 cut(s)	2217
BsuI	GTATCC	1 cut(s)	1526
BsuRI	GGCC	4 cut(s)	1314, 1537, 1627, 2089
BsuTUI	ATCGAT	1 cut(s)	2217
BtgI	CCRYGG	1 cut(s)	1885
BtgZI	GCGATG	1 cut(s)	1502
BtrI	CACGTC	1 cut(s)	691
BtsI	GCAGTG	1 cut(s)	2111
BtsIMutI	CAGTG	5 cut(s)	484, 532, 547, 1834, 2111
BveI	ACCTGC	2 cut(s)	1387, 2101
Cac8I	GCNNGC	7 cut(s)	302, 950, 954, 1324, 1629, 2172, 2234
CaiI	CAGNNNCTG	1 cut(s)	1291
CciI	TCATGA	1 cut(s)	211
CfoI	GCGC	1 cut(s)	2232
Cfr13I	GGNCC	4 cut(s)	884, 1574, 2113, 2259
ClaI	ATCGAT	1 cut(s)	2217
CseI	GACGC	1 cut(s)	5
CsiI	ACCWGGT	1 cut(s)	1928
Csp6I	GTAC	5 cut(s)	549, 1335, 1699, 1906, 1988
CviAII	CATG	8 cut(s)	212, 283, 301, 392, 1422, 1499, 1886, 1972
CviQI	GTAC	5 cut(s)	549, 1335, 1699, 1906, 1988
DdeI	CTNAG	6 cut(s)	130, 1018, 1089, 1284, 1434, 1674
DraI	TTTAAA	1 cut(s)	42
DriI	GACNNNNNGTC	1 cut(s)	1499
EaeI	YGGCCR	1 cut(s)	1625
Eam1104I	CTCTTC	2 cut(s)	637, 732
Eam1105I	GACNNNNNGTC	1 cut(s)	1499
EarI	CTCTTC	2 cut(s)	637, 732
Eco130I	CCWWGG	3 cut(s)	355, 887, 1885
Eco47I	GGWCC	4 cut(s)	884, 1574, 2113, 2259
Eco57I	CTGAAG	2 cut(s)	1262, 1653
Eco72I	CACGTG	1 cut(s)	1687
Eco88I	CYCGRG	3 cut(s)	199, 436, 1316
EcoNI	CCTNNNNNAGG	1 cut(s)	129
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
EcoT14I	CCWWGG	3 cut(s)	355, 887, 1885
ErhI	CCWWGG	3 cut(s)	355, 887, 1885
FaeI	CATG	8 cut(s)	215, 286, 304, 395, 1425, 1502, 1889, 1975
FaqI	GGGAC	3 cut(s)	677, 1294, 2268
FatI	CATG	8 cut(s)	211, 282, 300, 391, 1421, 1498, 1885, 1971
FauI	CCCGC	1 cut(s)	2000
FauNDI	CATATG	1 cut(s)	409
FbaI	TGATCA	2 cut(s)	1074, 1216
FspBI	CTAG	6 cut(s)	162, 465, 513, 675, 744, 2193
GlaI	GCGC	1 cut(s)	2231
GsaI	CCCAGC	1 cut(s)	2133
HaeII	RGCGCY	1 cut(s)	2233
HaeIII	GGCC	4 cut(s)	1314, 1537, 1627, 2089
HapII	CCGG	2 cut(s)	848, 1624
HgaI	GACGC	1 cut(s)	5
HhaI	GCGC	1 cut(s)	2232
Hin1I	GRCGYC	1 cut(s)	1654
Hin1II	CATG	8 cut(s)	215, 286, 304, 395, 1425, 1502, 1889, 1975
Hin6I	GCGC	1 cut(s)	2230
HinP1I	GCGC	1 cut(s)	2230
HindIII	AAGCTT	3 cut(s)	810, 1398, 1583
HpaII	CCGG	2 cut(s)	848, 1624
HphI	GGTGA	5 cut(s)	425, 773, 1261, 1918, 2026
Hpy166II	GTNNAC	4 cut(s)	388, 1574, 1777, 1825
Hpy8I	GTNNAC	4 cut(s)	388, 1574, 1777, 1825
Hpy99I	CGWCG	1 cut(s)	1659
HpyAV	CCTTC	8 cut(s)	384, 811, 857, 1240, 1628, 1749, 1927, 2245
HpyCH4III	ACNGT	6 cut(s)	479, 527, 1192, 1781, 1829, 1984
HpyCH4IV	ACGT	3 cut(s)	690, 1654, 1686
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1208, 1264, 1328, 1365, 1670, 1910, 2276
HpyF3I	CTNAG	6 cut(s)	130, 1018, 1089, 1284, 1434, 1674
HpySE526I	ACGT	3 cut(s)	690, 1654, 1686
Hsp92I	GRCGYC	1 cut(s)	1654
Hsp92II	CATG	8 cut(s)	215, 286, 304, 395, 1425, 1502, 1889, 1975
HspAI	GCGC	1 cut(s)	2230
KpnI	GGTACC	1 cut(s)	552
Ksp22I	TGATCA	2 cut(s)	1074, 1216
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	2 cut(s)	1054, 1901
LweI	GCATC	1 cut(s)	255
MabI	ACCWGGT	1 cut(s)	1928
MaeI	CTAG	6 cut(s)	162, 465, 513, 675, 744, 2193
MaeII	ACGT	3 cut(s)	690, 1654, 1686
MaeIII	GTNAC	6 cut(s)	227, 473, 521, 1148, 1924, 2195
MflI	RGATCY	3 cut(s)	10, 417, 1347
MhlI	GDGCHC	3 cut(s)	102, 1038, 1834
MluCI	AATT	9 cut(s)	149, 154, 584, 769, 793, 1444, 1599, 1749, 2031
MlyI	GAGTC	4 cut(s)	217, 320, 1276, 1488
MroXI	GAANNNNTTC	1 cut(s)	341
MseI	TTAA	7 cut(s)	41, 56, 258, 843, 1040, 1848, 1896
MspA1I	CMGCKG	2 cut(s)	1211, 1631
MspI	CCGG	2 cut(s)	848, 1624
MspR9I	CCNGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
Mva1269I	GAATGC	1 cut(s)	1258
MvaI	CCWGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
MvnI	CGCG	2 cut(s)	16, 1995
MwoI	GCNNNNNNNGC	7 cut(s)	1208, 1264, 1328, 1365, 1670, 1910, 2276
NcoI	CCATGG	1 cut(s)	1885
NdeI	CATATG	1 cut(s)	409
NlaIII	CATG	8 cut(s)	215, 286, 304, 395, 1425, 1502, 1889, 1975
NlaIV	GGNNCC	4 cut(s)	12, 550, 1576, 1934
NmeAIII	GCCGAG	1 cut(s)	358
NmuCI	GTSAC	2 cut(s)	227, 1924
NspI	RCATGY	3 cut(s)	304, 1425, 1975
PaeI	GCATGC	1 cut(s)	304
PaeR7I	CTCGAG	2 cut(s)	199, 1316
PagI	TCATGA	1 cut(s)	211
PaqCI	CACCTGC	1 cut(s)	1387
PciSI	GCTCTTC	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	1 cut(s)	1258
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	7 cut(s)	35, 556, 668, 901, 971, 1620, 2093
PflMI	CCANNNNNTGG	1 cut(s)	428
PleI	GAGTC	4 cut(s)	216, 319, 1276, 1488
PmaCI	CACGTG	1 cut(s)	1687
PmlI	CACGTG	1 cut(s)	1687
PpsI	GAGTC	4 cut(s)	216, 319, 1276, 1488
Ppu21I	YACGTR	1 cut(s)	1687
PshBI	ATTAAT	1 cut(s)	1896
PsiI	TTATAA	1 cut(s)	606
Psp6I	CCWGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
PspCI	CACGTG	1 cut(s)	1687
PspFI	CCCAGC	1 cut(s)	2129
PspGI	CCWGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
PspN4I	GGNNCC	4 cut(s)	12, 550, 1576, 1934
PspPI	GGNCC	4 cut(s)	884, 1574, 2113, 2259
PspXI	VCTCGAGB	1 cut(s)	1316
PstNI	CAGNNNCTG	1 cut(s)	1291
PsuI	RGATCY	3 cut(s)	10, 417, 1347
PvuII	CAGCTG	2 cut(s)	1211, 1631
RsaI	GTAC	5 cut(s)	550, 1336, 1700, 1907, 1989
RsaNI	GTAC	5 cut(s)	549, 1335, 1699, 1906, 1988
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	7 cut(s)	41, 56, 258, 843, 1040, 1848, 1896
Sau96I	GGNCC	4 cut(s)	884, 1574, 2113, 2259
SchI	GAGTC	4 cut(s)	217, 320, 1276, 1488
ScrFI	CCNGG	6 cut(s)	553, 567, 653, 759, 1617, 1930
SduI	GDGCHC	3 cut(s)	102, 1038, 1834
SexAI	ACCWGGT	1 cut(s)	1928
SfaNI	GCATC	1 cut(s)	255
Sfr274I	CTCGAG	2 cut(s)	199, 1316
SinI	GGWCC	4 cut(s)	884, 1574, 2113, 2259
SlaI	CTCGAG	2 cut(s)	199, 1316
SmlI	CTYRAG	6 cut(s)	199, 205, 807, 1316, 1736, 2122
SmoI	CTYRAG	6 cut(s)	199, 205, 807, 1316, 1736, 2122
SpeI	ACTAGT	1 cut(s)	512
SphI	GCATGC	1 cut(s)	304
Sse9I	AATT	9 cut(s)	149, 154, 584, 769, 793, 1444, 1599, 1749, 2031
SsiI	CCGC	7 cut(s)	14, 22, 956, 1610, 1993, 2116, 2174
SspMI	CTAG	6 cut(s)	162, 465, 513, 675, 744, 2193
StyD4I	CCNGG	6 cut(s)	551, 565, 651, 757, 1615, 1928
StyI	CCWWGG	3 cut(s)	355, 887, 1885
TaaI	ACNGT	6 cut(s)	479, 527, 1192, 1781, 1829, 1984
TaiI	ACGT	3 cut(s)	693, 1657, 1689
TaqI	TCGA	8 cut(s)	52, 200, 706, 1317, 1834, 1977, 2151, 2217
TasI	AATT	9 cut(s)	149, 154, 584, 769, 793, 1444, 1599, 1749, 2031
TatI	WGTACW	1 cut(s)	1698
TauI	GCSGC	2 cut(s)	959, 2177
TfiI	GAWTC	7 cut(s)	35, 556, 668, 901, 971, 1620, 2093
Tru1I	TTAA	7 cut(s)	41, 56, 258, 843, 1040, 1848, 1896
Tru9I	TTAA	7 cut(s)	41, 56, 258, 843, 1040, 1848, 1896
TscAI	CASTG	5 cut(s)	484, 532, 547, 1834, 2111
TseFI	GTSAC	2 cut(s)	227, 1924
Tsp45I	GTSAC	2 cut(s)	227, 1924
TspDTI	ATGAA	8 cut(s)	255, 609, 876, 1464, 1824, 1870, 1940, 2235
TspGWI	ACGGA	2 cut(s)	894, 2272
TspRI	CASTG	5 cut(s)	484, 532, 547, 1834, 2111
Van91I	CCANNNNNTGG	1 cut(s)	428
VpaK11BI	GGWCC	4 cut(s)	884, 1574, 2113, 2259
VspI	ATTAAT	1 cut(s)	1896
XagI	CCTNNNNNAGG	1 cut(s)	129
XapI	RAATTY	1 cut(s)	149
XceI	RCATGY	3 cut(s)	304, 1425, 1975
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XhoI	CTCGAG	2 cut(s)	199, 1316
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	6 cut(s)	162, 465, 513, 675, 744, 2193
ZraI	GACGTC	1 cut(s)	1655

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.