Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002750

Physical Location & Seq

Genomic Coordinates Reverse (-)

11885230 .. 11888409

Gene Structure 3180 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G012090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGACAATGGATCCGCGTCTGCGGAGTTTCTATGATTCTTTAAATGGAGTTCGATTAAGCAACCGACCTTTTTCCATTCTTTCACATCAGAACATTGTGCCCCAATCCCCATTTAGTAGTCATCCTTTCTTAGGTAGCGATTATAGGGAATTCAATTACCCTAGACCCGATCTAACCCCAAATGATTTATCGTCTGTCTCGAGCTTGAGTCATGAGGAGGAAGATTGTGACTTTTCAGATGAAGTCTTGAAATACATTAACCAGATGCTTATGGAAGAAGACATGGAGGATAAGACTTGCATGCTTCAAGAGTCTTTGGAACTTCAAGCAGCTGAGAAGTCATTCTATGATGTCCTTGGAAAGAAATATCCCCCTTCCCCAGAAGTAAACCATGATTTTTCAGTTCCATATGGTGAGATCCCAGATGATGGTTTCTCGGGAAACAGCAGCAACTATATTACTTCTAGTAGTAGTAACAGTGGTTTCTCTGGAAATGGCAGCAGCTATATTACCAGCAGTAGTAACAGTGGTAGCTATTTCAGTGATGGTACCTGGATTCAAAGTCCAGGTGGATATATGTCTCAATTTCAAGGTCTTCCACCTTATAACATTTCCCATTCATCGTATGGCTCTTCAACTATGGTCAGTAGCCTGGATGGGCTGGTGGAATCTCCTAATAGCAGTCTTCACGTCCCTGATTTCAGTACTGAGACTCGATCTGTTTGGCAGTTCAATAAGGGGGTTGAAGAGGCTAGTAGGTTTCTTCCTGGTGAGACTAATTTGGTTGTTGATCTTGATGTGAATTGGTTGTCGGCTCAAGCTTTGAAGGTTAGGACTGATGAGGAAGTTGTTAAACCGGAGAAAAAGGATGAAGGGGAGTGTTCTTCCTGTCCAAGGGGGAGGAAGAATCCGTATAGGGAGGATGATGAGGATGTGGAAGAAAATAGGAGTAGCAAGCAAGCGGCAGTTTCTACTGAATCTACTCTGCGATCAGAGATGTTTGATAAGATTTTGCTTTGTAGCTTAGGAGAGGGTAAAGAGCACTTAATATCCAAACGGGAGCAGTTGCAGAATGGAATGATCAAAAGTGTGCCTCAGAAAGAGAAATCCAAAGGATCAAATGGAGGAAAAGGTCGTGGTAAGAAACAAAGTGGTAACAAAAAGGATGTTGTGGATTTGAGAAGTCTCCTCATTACTGTTGCACAAGCAGTTGCAGCTGATGATCATAGGACTGCAAATGAGCTGCTGAAGAAGGTGAGGCTGCATTCTTCGCCTTTTGGAGATGGGACTCAGAGACTGGCTCATTGCTTTGCTGATGGCCTCGAGGCTCGCTTGGCTGGTACTGGTAGCCAGATCTATAAAGGCTTTGTTAGCAAAAGAACACCTGCTGCTGATGTCTTGAAAGCTTACCATCTTTTCCTTGCTGCATGTCCATTTACTAAGATGTCTAATTTTGTCTCAAACAAGACCATAATGACTTCATCACAAAAAGCGATGAGACTCCATGTCATAGATTTTGGTATCCATTATGGTTTCCAATGGCCTACCCTTATTCAGAGGATCGCAATGAGGGAGGGTGGACCCCCAAAGCTTCGGATTACTGGAATTGAATTTCCGCAACCAGGATTCCGGCCAGCTGAAGGAGTAGAGGAAACAGGACGTCGCTTGGCAGCTTATGCTGAGACATTCCACGTGCCATTTGAGTACAATGCTATTGCAAAGAAATGGGAAAACATTACACTTGAGGAACTAAAAATTGGAAGGGATGAGTTTCTTGTTGTGAACTGTTTGTATCGGGGTAAGAACTTGCTTGATGAAAGTGTGGCTGTGGACAGTGCTCGAAATAGGGTTCTTAATCTGATAAGGAGAACTAATCCAGACATTTTCATCCATGGAGTTATTAATGGAGCGTACAACGCCCCCTTCTTTGTCACCAGGTTCCGAGAGGCTTTATTTCATTTTTCTTCAATGTTTGACATGCTCGAAACAGTTGTACCCCGCGAGGATCGGGAGAGGATGGTGATTGAGAAAGAGATAATTGGCAGGGAGGCTTTGAATGTTATAGCTTGTGAGGGATGGGAAAGAGTGGAAAGGCCAGAATCCTACAAGCAGTGGCAGGTCCGCAACTTGAGGGCTGGGTTTGTGCAAATACCTTTCGACAGAGAACTTGTGAAGCAGGCGGCTCAGAAAGTGAAATCTAGTTACCACAAGGATTTTGTTATCGATGAAGATGGGCGCTGGCTGTTGCAGGGATGGAAGGGACGGACCATATTTGCCATTTCTGCTTGGAAACCTTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

766

Amino Acids

86.26

Weight (kDa)

6.02

Isoelectric Point (pI)

52.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	393 - 764	7.9e-123	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002750)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37650 AT2G37650
fragaria_vesca	FvH4_6g13520 FvH4_6g13520 FvH4_6g13520 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720 FvH4_7g22720
malus_domestica	MD04G1130400.v1.1 MD12G1143500.v1.1
prunus_persica	Prupe.2G237300_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1 Prupe.6G257000_v2.0.a1
pyrus_communis	pycom04g11860 pycom12g13820
rosa_chinensis	RchiOBHm_Chr1g0367811 RchiOBHm_Chr3g0466391
rosa_laevigata	RLG00000024578 RLG00000027261
rosa_multiflora	Rmu_sc0001791.1_g000005 Rmu_sc0003480.1_g000003 Rmu_sc0010008.1_g000006
rosa_roxburghii	Rroxscaffold_4G00289190 Rroxscaffold_6G00414510
rosa_rugosa	Rorug01G0336900 Rorug01G0337000 Rorug03G0081400
rosa_samantha	Rh1AG344000 Rh1BG306000 Rh1CG321500 Rh1DG338200 Rh3AG128000 Rh3BG149300 Rh3DG150000
rosa_wichuraiana	Rw1G030620 Rw3G012090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	606
AarI	CACCTGC	1 cut(s)	1393
AatII	GACGTC	1 cut(s)	1663
AbsI	CCTCGAGG	1 cut(s)	1322
Acc36I	ACCTGC	2 cut(s)	1393, 2107
Acc65I	GGTACC	1 cut(s)	548
AccB1I	GGYRCC	1 cut(s)	548
AccB7I	CCANNNNNTGG	1 cut(s)	428
AccII	CGCG	2 cut(s)	16, 2001
AciI	CCGC	7 cut(s)	14, 22, 962, 1616, 1999, 2122, 2180
AclWI	GGATC	6 cut(s)	5, 18, 412, 1123, 1568, 2013
AcoI	YGGCCR	1 cut(s)	1631
AcsI	RAATTY	2 cut(s)	149, 1610
AcuI	CTGAAG	2 cut(s)	1268, 1659
AcvI	CACGTG	1 cut(s)	1693
AcyI	GRCGYC	1 cut(s)	1660
AfaI	GTAC	6 cut(s)	550, 706, 1342, 1706, 1913, 1995
AfiI	CCNNNNNNNGG	5 cut(s)	131, 428, 894, 1622, 1640
AhdI	GACNNNNNGTC	1 cut(s)	1505
AjiI	CACGTC	1 cut(s)	691
AjnI	CCWGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
AjuI	GAANNNNNNNTTGG	2 cut(s)	1740, 1772
Alw21I	GWGCWC	2 cut(s)	1044, 1840
Alw26I	GTCTC	9 cut(s)	202, 585, 704, 767, 1190, 1288, 1462, 1492, 1676
AlwI	GGATC	6 cut(s)	5, 18, 412, 1123, 1568, 2013
AlwNI	CAGNNNCTG	1 cut(s)	1297
Ama87I	CYCGRG	3 cut(s)	199, 436, 1322
AoxI	GGCC	4 cut(s)	1318, 1541, 1631, 2093
ApoI	RAATTY	2 cut(s)	149, 1610
AseI	ATTAAT	1 cut(s)	1902
Asp700I	GAANNNNTTC	1 cut(s)	341
Asp718I	GGTACC	1 cut(s)	548
AspLEI	GCGC	1 cut(s)	2238
AspS9I	GGNCC	3 cut(s)	1580, 2119, 2265
AsuHPI	GGTGA	5 cut(s)	425, 782, 1267, 1924, 2032
AvaI	CYCGRG	3 cut(s)	199, 436, 1322
AvaII	GGWCC	3 cut(s)	1580, 2119, 2265
BaeGI	GKGCMC	1 cut(s)	102
BaeI	ACNNNNGTAYC	2 cut(s)	1977, 2010
BamHI	GGATCC	1 cut(s)	10
BanI	GGYRCC	1 cut(s)	548
BbrPI	CACGTG	1 cut(s)	1693
BbsI	GAAGAC	3 cut(s)	285, 587, 677
Bbv12I	GWGCWC	2 cut(s)	1044, 1840
BciT130I	CCWGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
BciVI	GTATCC	1 cut(s)	1532
BclI	TGATCA	2 cut(s)	1080, 1222
BcoDI	GTCTC	9 cut(s)	202, 585, 704, 767, 1190, 1288, 1462, 1492, 1676
BfaI	CTAG	4 cut(s)	162, 465, 753, 2199
BfoI	RGCGCY	1 cut(s)	2239
BfuAI	ACCTGC	2 cut(s)	1393, 2107
BfuI	GTATCC	1 cut(s)	1532
BglII	AGATCT	1 cut(s)	1353
BmcAI	AGTACT	1 cut(s)	706
Bme1390I	CCNGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
Bme18I	GGWCC	3 cut(s)	1580, 2119, 2265
BmeRI	GACNNNNNGTC	1 cut(s)	1505
BmeT110I	CYCGRG	3 cut(s)	199, 436, 1322
BmgBI	CACGTC	1 cut(s)	691
BmgT120I	GGNCC	3 cut(s)	1580, 2119, 2265
BmiI	GGNNCC	4 cut(s)	12, 550, 1582, 1940
BmrFI	CCNGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
BmsI	GCATC	1 cut(s)	255
BpiI	GAAGAC	3 cut(s)	285, 587, 677
BplI	GAGNNNNNCTC	2 cut(s)	1285, 1317
Bpu10I	CCTNAGC	1 cut(s)	1024
BpuEI	CTTGAG	4 cut(s)	226, 801, 1763, 2149
Bsa29I	ATCGAT	1 cut(s)	2223
BsaAI	YACGTR	1 cut(s)	1693
BsaHI	GRCGYC	1 cut(s)	1660
BsaJI	CCNNGG	3 cut(s)	355, 893, 1891
BsaWI	WCCGGW	1 cut(s)	856
Bsc4I	CCNNNNNNNGG	5 cut(s)	131, 428, 894, 1622, 1640
Bse1I	ACTGG	3 cut(s)	1302, 1348, 1606
Bse3DI	GCAATG	2 cut(s)	1303, 1572
BseBI	CCWGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
BseCI	ATCGAT	1 cut(s)	2223
BseDI	CCNNGG	3 cut(s)	355, 893, 1891
BseLI	CCNNNNNNNGG	5 cut(s)	131, 428, 894, 1622, 1640
BseMI	GCAATG	2 cut(s)	1303, 1572
BseMII	CTCAG	6 cut(s)	324, 699, 1109, 1304, 1671, 2198
BseNI	ACTGG	3 cut(s)	1302, 1348, 1606
BseRI	GAGGAG	2 cut(s)	230, 1178
BseSI	GKGCMC	1 cut(s)	102
BseYI	CCCAGC	1 cut(s)	2135
Bsh1236I	CGCG	2 cut(s)	16, 2001
BshFI	GGCC	4 cut(s)	1320, 1543, 1633, 2095
BshNI	GGYRCC	1 cut(s)	548
BshVI	ATCGAT	1 cut(s)	2223
BsiHKAI	GWGCWC	2 cut(s)	1044, 1840
BsiHKCI	CYCGRG	3 cut(s)	199, 436, 1322
BsiSI	CCGG	2 cut(s)	857, 1630
BslFI	GGGAC	3 cut(s)	677, 1300, 2274
BslI	CCNNNNNNNGG	5 cut(s)	131, 428, 894, 1622, 1640
BsmAI	GTCTC	9 cut(s)	202, 585, 704, 767, 1190, 1288, 1462, 1492, 1676
BsmFI	GGGAC	3 cut(s)	677, 1300, 2274
BsmI	GAATGC	1 cut(s)	1264
BsnI	GGCC	4 cut(s)	1320, 1543, 1633, 2095
BsoBI	CYCGRG	3 cut(s)	199, 436, 1322
Bsp1286I	GDGCHC	3 cut(s)	102, 1044, 1840
Bsp19I	CCATGG	1 cut(s)	1891
BspACI	CCGC	7 cut(s)	14, 22, 962, 1616, 1999, 2122, 2180
BspANI	GGCC	4 cut(s)	1320, 1543, 1633, 2095
BspCNI	CTCAG	6 cut(s)	325, 700, 1108, 1303, 1672, 2197
BspDI	ATCGAT	1 cut(s)	2223
BspFNI	CGCG	2 cut(s)	16, 2001
BspHI	TCATGA	1 cut(s)	211
BspLI	GGNNCC	4 cut(s)	12, 550, 1582, 1940
BspMI	ACCTGC	2 cut(s)	1393, 2107
BspPI	GGATC	6 cut(s)	5, 18, 412, 1123, 1568, 2013
BspQI	GCTCTTC	1 cut(s)	637
BspT107I	GGYRCC	1 cut(s)	548
BsrDI	GCAATG	2 cut(s)	1303, 1572
BsrI	ACTGG	3 cut(s)	1302, 1348, 1606
BssECI	CCNNGG	3 cut(s)	355, 893, 1891
BssNI	GRCGYC	1 cut(s)	1660
BssT1I	CCWWGG	3 cut(s)	355, 893, 1891
Bst2UI	CCWGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
Bst4CI	ACNGT	6 cut(s)	479, 527, 1198, 1787, 1835, 1990
Bst6I	CTCTTC	2 cut(s)	637, 741
BstACI	GRCGYC	1 cut(s)	1660
BstAPI	GCANNNNNTGC	1 cut(s)	1676
BstBAI	YACGTR	1 cut(s)	1693
BstC8I	GCNNGC	7 cut(s)	302, 956, 960, 1330, 1635, 2178, 2240
BstDEI	CTNAG	9 cut(s)	130, 333, 708, 1024, 1095, 1290, 1440, 1680, 2184
BstDSI	CCRYGG	1 cut(s)	1891
BstENI	CCTNNNNNAGG	2 cut(s)	129, 892
BstFNI	CGCG	2 cut(s)	16, 2001
BstH2I	RGCGCY	1 cut(s)	2239
BstHHI	GCGC	1 cut(s)	2238
BstMAI	GTCTC	9 cut(s)	202, 585, 704, 767, 1190, 1288, 1462, 1492, 1676
BstMWI	GCNNNNNNNGC	7 cut(s)	1214, 1270, 1334, 1371, 1676, 1916, 2282
BstNI	CCWGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
BstNSI	RCATGY	3 cut(s)	304, 1431, 1981
BstSCI	CCNGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
BstSLI	GKGCMC	1 cut(s)	102
BstUI	CGCG	2 cut(s)	16, 2001
BstV2I	GAAGAC	3 cut(s)	285, 587, 677
BstX2I	RGATCY	3 cut(s)	10, 417, 1353
BstYI	RGATCY	3 cut(s)	10, 417, 1353
Bsu15I	ATCGAT	1 cut(s)	2223
BsuI	GTATCC	1 cut(s)	1532
BsuRI	GGCC	4 cut(s)	1320, 1543, 1633, 2095
BsuTUI	ATCGAT	1 cut(s)	2223
BtgI	CCRYGG	1 cut(s)	1891
BtgZI	GCGATG	1 cut(s)	1508
BtrI	CACGTC	1 cut(s)	691
BtsI	GCAGTG	1 cut(s)	2117
BtsIMutI	CAGTG	5 cut(s)	484, 532, 547, 1840, 2117
BveI	ACCTGC	2 cut(s)	1393, 2107
Cac8I	GCNNGC	7 cut(s)	302, 956, 960, 1330, 1635, 2178, 2240
CaiI	CAGNNNCTG	1 cut(s)	1297
CciI	TCATGA	1 cut(s)	211
CfoI	GCGC	1 cut(s)	2238
Cfr13I	GGNCC	3 cut(s)	1580, 2119, 2265
ClaI	ATCGAT	1 cut(s)	2223
CseI	GACGC	1 cut(s)	5
CsiI	ACCWGGT	1 cut(s)	1934
Csp6I	GTAC	6 cut(s)	549, 705, 1341, 1705, 1912, 1994
CviAII	CATG	8 cut(s)	212, 283, 301, 392, 1428, 1505, 1892, 1978
CviQI	GTAC	6 cut(s)	549, 705, 1341, 1705, 1912, 1994
DdeI	CTNAG	9 cut(s)	130, 333, 708, 1024, 1095, 1290, 1440, 1680, 2184
DraI	TTTAAA	1 cut(s)	42
DriI	GACNNNNNGTC	1 cut(s)	1505
EaeI	YGGCCR	1 cut(s)	1631
Eam1104I	CTCTTC	2 cut(s)	637, 741
Eam1105I	GACNNNNNGTC	1 cut(s)	1505
EarI	CTCTTC	2 cut(s)	637, 741
Eco130I	CCWWGG	3 cut(s)	355, 893, 1891
Eco47I	GGWCC	3 cut(s)	1580, 2119, 2265
Eco57I	CTGAAG	2 cut(s)	1268, 1659
Eco72I	CACGTG	1 cut(s)	1693
Eco88I	CYCGRG	3 cut(s)	199, 436, 1322
EcoNI	CCTNNNNNAGG	2 cut(s)	129, 892
EcoRI	GAATTC	1 cut(s)	149
EcoRII	CCWGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
EcoT14I	CCWWGG	3 cut(s)	355, 893, 1891
ErhI	CCWWGG	3 cut(s)	355, 893, 1891
FaeI	CATG	8 cut(s)	215, 286, 304, 395, 1431, 1508, 1895, 1981
FaqI	GGGAC	3 cut(s)	677, 1300, 2274
FatI	CATG	8 cut(s)	211, 282, 300, 391, 1427, 1504, 1891, 1977
FauI	CCCGC	1 cut(s)	2006
FauNDI	CATATG	1 cut(s)	409
FbaI	TGATCA	2 cut(s)	1080, 1222
FspBI	CTAG	4 cut(s)	162, 465, 753, 2199
GlaI	GCGC	1 cut(s)	2237
GsaI	CCCAGC	1 cut(s)	2139
HaeII	RGCGCY	1 cut(s)	2239
HaeIII	GGCC	4 cut(s)	1320, 1543, 1633, 2095
HapII	CCGG	2 cut(s)	857, 1630
HgaI	GACGC	1 cut(s)	5
HhaI	GCGC	1 cut(s)	2238
Hin1I	GRCGYC	1 cut(s)	1660
Hin1II	CATG	8 cut(s)	215, 286, 304, 395, 1431, 1508, 1895, 1981
Hin6I	GCGC	1 cut(s)	2236
HinP1I	GCGC	1 cut(s)	2236
HindIII	AAGCTT	3 cut(s)	819, 1404, 1589
HpaII	CCGG	2 cut(s)	857, 1630
HphI	GGTGA	5 cut(s)	425, 782, 1267, 1924, 2032
Hpy166II	GTNNAC	4 cut(s)	388, 1580, 1783, 1831
Hpy8I	GTNNAC	4 cut(s)	388, 1580, 1783, 1831
Hpy99I	CGWCG	1 cut(s)	1665
HpyAV	CCTTC	8 cut(s)	384, 820, 866, 1246, 1634, 1755, 1933, 2251
HpyCH4III	ACNGT	6 cut(s)	479, 527, 1198, 1787, 1835, 1990
HpyCH4IV	ACGT	3 cut(s)	690, 1660, 1692
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1214, 1270, 1334, 1371, 1676, 1916, 2282
HpyF3I	CTNAG	9 cut(s)	130, 333, 708, 1024, 1095, 1290, 1440, 1680, 2184
HpySE526I	ACGT	3 cut(s)	690, 1660, 1692
Hsp92I	GRCGYC	1 cut(s)	1660
Hsp92II	CATG	8 cut(s)	215, 286, 304, 395, 1431, 1508, 1895, 1981
HspAI	GCGC	1 cut(s)	2236
KpnI	GGTACC	1 cut(s)	552
Ksp22I	TGATCA	2 cut(s)	1080, 1222
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	2 cut(s)	1060, 1907
LweI	GCATC	1 cut(s)	255
MabI	ACCWGGT	1 cut(s)	1934
MaeI	CTAG	4 cut(s)	162, 465, 753, 2199
MaeII	ACGT	3 cut(s)	690, 1660, 1692
MaeIII	GTNAC	6 cut(s)	227, 473, 521, 1154, 1930, 2201
MflI	RGATCY	3 cut(s)	10, 417, 1353
MhlI	GDGCHC	3 cut(s)	102, 1044, 1840
MlyI	GAGTC	5 cut(s)	217, 320, 706, 1282, 1494
MroXI	GAANNNNTTC	1 cut(s)	341
MseI	TTAA	7 cut(s)	41, 56, 258, 852, 1046, 1854, 1902
MspA1I	CMGCKG	3 cut(s)	332, 1217, 1637
MspI	CCGG	2 cut(s)	857, 1630
MspR9I	CCNGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
Mva1269I	GAATGC	1 cut(s)	1264
MvaI	CCWGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
MvnI	CGCG	2 cut(s)	16, 2001
MwoI	GCNNNNNNNGC	7 cut(s)	1214, 1270, 1334, 1371, 1676, 1916, 2282
NcoI	CCATGG	1 cut(s)	1891
NdeI	CATATG	1 cut(s)	409
NlaIII	CATG	8 cut(s)	215, 286, 304, 395, 1431, 1508, 1895, 1981
NlaIV	GGNNCC	4 cut(s)	12, 550, 1582, 1940
NmuCI	GTSAC	2 cut(s)	227, 1930
NspI	RCATGY	3 cut(s)	304, 1431, 1981
PaeI	GCATGC	1 cut(s)	304
PaeR7I	CTCGAG	2 cut(s)	199, 1322
PagI	TCATGA	1 cut(s)	211
PaqCI	CACCTGC	1 cut(s)	1393
PciSI	GCTCTTC	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	1 cut(s)	197
PctI	GAATGC	1 cut(s)	1264
PdmI	GAANNNNTTC	1 cut(s)	341
PfeI	GAWTC	7 cut(s)	35, 556, 668, 907, 977, 1626, 2099
PflMI	CCANNNNNTGG	1 cut(s)	428
PleI	GAGTC	5 cut(s)	216, 319, 706, 1282, 1494
PmaCI	CACGTG	1 cut(s)	1693
PmlI	CACGTG	1 cut(s)	1693
PpsI	GAGTC	5 cut(s)	216, 319, 706, 1282, 1494
Ppu21I	YACGTR	1 cut(s)	1693
PshBI	ATTAAT	1 cut(s)	1902
PsiI	TTATAA	1 cut(s)	606
Psp6I	CCWGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
PspCI	CACGTG	1 cut(s)	1693
PspFI	CCCAGC	1 cut(s)	2135
PspGI	CCWGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
PspN4I	GGNNCC	4 cut(s)	12, 550, 1582, 1940
PspPI	GGNCC	3 cut(s)	1580, 2119, 2265
PspXI	VCTCGAGB	1 cut(s)	1322
PstNI	CAGNNNCTG	1 cut(s)	1297
PsuI	RGATCY	3 cut(s)	10, 417, 1353
PvuII	CAGCTG	3 cut(s)	332, 1217, 1637
RsaI	GTAC	6 cut(s)	550, 706, 1342, 1706, 1913, 1995
RsaNI	GTAC	6 cut(s)	549, 705, 1341, 1705, 1912, 1994
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	7 cut(s)	41, 56, 258, 852, 1046, 1854, 1902
Sau96I	GGNCC	3 cut(s)	1580, 2119, 2265
ScaI	AGTACT	1 cut(s)	706
SchI	GAGTC	5 cut(s)	217, 320, 706, 1282, 1494
ScrFI	CCNGG	6 cut(s)	553, 567, 653, 768, 1623, 1936
SduI	GDGCHC	3 cut(s)	102, 1044, 1840
SexAI	ACCWGGT	1 cut(s)	1934
SfaNI	GCATC	1 cut(s)	255
Sfr274I	CTCGAG	2 cut(s)	199, 1322
SinI	GGWCC	3 cut(s)	1580, 2119, 2265
SlaI	CTCGAG	2 cut(s)	199, 1322
SmlI	CTYRAG	6 cut(s)	199, 205, 816, 1322, 1742, 2128
SmoI	CTYRAG	6 cut(s)	199, 205, 816, 1322, 1742, 2128
SphI	GCATGC	1 cut(s)	304
SsiI	CCGC	7 cut(s)	14, 22, 962, 1616, 1999, 2122, 2180
SspMI	CTAG	4 cut(s)	162, 465, 753, 2199
StyD4I	CCNGG	6 cut(s)	551, 565, 651, 766, 1621, 1934
StyI	CCWWGG	3 cut(s)	355, 893, 1891
TaaI	ACNGT	6 cut(s)	479, 527, 1198, 1787, 1835, 1990
TaiI	ACGT	3 cut(s)	693, 1663, 1695
TaqI	TCGA	8 cut(s)	52, 200, 715, 1323, 1840, 1983, 2157, 2223
TatI	WGTACW	2 cut(s)	704, 1704
TauI	GCSGC	2 cut(s)	965, 2183
TfiI	GAWTC	7 cut(s)	35, 556, 668, 907, 977, 1626, 2099
Tru1I	TTAA	7 cut(s)	41, 56, 258, 852, 1046, 1854, 1902
Tru9I	TTAA	7 cut(s)	41, 56, 258, 852, 1046, 1854, 1902
TscAI	CASTG	5 cut(s)	484, 532, 547, 1840, 2117
TseFI	GTSAC	2 cut(s)	227, 1930
Tsp45I	GTSAC	2 cut(s)	227, 1930
TspDTI	ATGAA	8 cut(s)	255, 609, 885, 1470, 1830, 1876, 1946, 2241
TspGWI	ACGGA	2 cut(s)	900, 2278
TspRI	CASTG	5 cut(s)	484, 532, 547, 1840, 2117
Van91I	CCANNNNNTGG	1 cut(s)	428
VpaK11BI	GGWCC	3 cut(s)	1580, 2119, 2265
VspI	ATTAAT	1 cut(s)	1902
XagI	CCTNNNNNAGG	2 cut(s)	129, 892
XapI	RAATTY	2 cut(s)	149, 1610
XceI	RCATGY	3 cut(s)	304, 1431, 1981
XcmI	CCANNNNNNNNNTGG	1 cut(s)	623
XhoI	CTCGAG	2 cut(s)	199, 1322
XmnI	GAANNNNTTC	1 cut(s)	341
XspI	CTAG	4 cut(s)	162, 465, 753, 2199
ZraI	GACGTC	1 cut(s)	1661
ZrmI	AGTACT	1 cut(s)	706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.