Rh1DG338200

Belongs to the GRAS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0002750
Physical Location & Seq
Forward (+)
56305351 .. 56309118
3768 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG338200.1

Sequence Viewer

Length: 2211 bp
ATGGTCATGGATCAAGCCTTGAGTGAGTTGTTGGAATTCAGGGATCAAGCTCTTTCGGACTCGATGTATAAGAAACTAGATAGTGGAATCGGGAACGGTAGTGGTTCAAGTAAGGTACTTGGACATAAGTATGCTACTACGGTCCGAGTGCCTCCTACTCAAATTCCTAGTGATTTAGTGCCGCATTTGAGCATGAATTCAGATGGGGATTCACAGGAAGATTGTGATTTTAGTGATGTGGTTCTCAAGTACATTAGCCAGATGCTTATGGAAGAAGATATGGAAGAAAAAACTTGCATGTATCAGGAGTCTGCGGCACTTCATGCTGCAGAGCAATCTTTTTATGAGCTTATTGGAGAGAAGCATCCTCTGCCGCCTGATTTGACTCCTGCTGCTGATCAGAACCATGAAAGCCCAGATGAAAGTCATTCTTTACATTCCAGCTGTTGTAGCACTACCTCTACCAGTACTAGTAGTAGCATTAGGGATTGTGATTTGCGTGAGTTTAAGTCTCTTAATGTTGCTCCTCAGTCGACTTCTCAGTCATCCCATGCTTCATCACATGGAGCCAGTAACATTGTAGATGGGTTTGTGGATTCTCCTGTGAGCACTCTTAGGGTTCCTGACTTTTTCAATGAGACTGATTCAATTATGCAGTTTAAGAAAGGGTTCGAGGAAGCGAGTAAGTTTCTTCCAAATAATAGTCTAATTGTTGATTTGGAGAGTAACACACTGTTGCTTAAAGAGCTGAAGGCAGATGCAACAGATATGCTAGTTAAGGTAGACCAGAAGAATGACAATGAGTACTCTTCTGCTGGGTCAAGGAGAAAGAAGCATTCTTATCATGACGATGTGATTTTAGAAGGGGAAAGGAGTAACAAGCAATCATCAGTTTCTACTGAATCAGCTGTGAGTCCGGAAATGTTTGACATGGTTTTGCTAAACTGTGGACAAGGTGAATCTGCTCTTCGCGAAGCTTTGCAGAATGGAACAAAAAAGAACATACCACAAAATGGTCAGTCAAAGGGGCCGAGTGGTGGAAAATCCCGTGGGAAGAAGCAGGGAGGTAAAAAGGACGTGGTGGATTTGAGAACTCTTTTGACGGTCTGTGCACAAGCTATTGCAGCTGGTGATGAGAGAACTGGCAACGACTTACTTAAGCGGATCAGACAGCATGCTTCTCCGGTGGGAGATGGGATGCAAAGAATGGCTTGCTGTTTTGCTGATGGTCTTGAGGCACGAATGGCTGGATCTGGTACTCAGATTTACAGAGCCCTTATAACCAAGCCAACATCAGCTGCAGATGTCTTGAAGGCTTACCATCTATTTCTCGCTGCTTGTCCATTCAAGAAGCTATCAAATTTCTTCTCAAATAAGACAATAATGAATGTATCCGAGAAAGCAACAAGGCTCCACATTATTGATTTCGGTATTATGTATGGTTTTCAATGGCCTTGCCTCATACAACGTCTCTCATCTAGGCCTGGTGGCCCTCCAAAGCTCCGAATTACTGGGATCGATTTTCCAAATCCAGGTTTCCGACCAGCGGAAAGGGTTGAGGAGACAGGACGACGCTTAGCAAACTATGCAGAAACTTTTAAAGTTCCATTTGAGTTCAACGCCATAGCACAAAAGTGGGACACCATTCAAATTGAGGATCTTAAACTCGATCGTGATGAGGTGCTTGTTGTGAATTCTATTTACAGACTTAGAAACCTACTTGATGAGACTGTGGTGGTAGAGAGTCCAAGAGATATTGTCCTGAACCTGATAAGGAAGATGAATCCAGATGTCTACATACTTGGAGTTGTAAATGGAGCCTACAGTGCCCCCTTCTTTCTTTCAAGATTTCGTGAGGCTCTCTTCCACTTCTCTACATTGTTTGACATGCTTGACATGTGTGTGCCCCGTGATATTCCGGAGCGGATGTTGATTGAGAGGGAGATATTTGGCCGGGAGGCAATGAATGTCATTGCGTGTGAGGGTTCAGAGAGGATTGAAAGACCAGAAACATACAAGCAGTGGCAGGTGAGGAATCGGAGGGCTGGTTTTACACAACTTCCTTTGAACCAGGAGATCATGAGCATAGCAAAGGACAGATTGCATGCTTACTACCACAAGGATTTCGTAATTGATGAAGATGGCCCGTGGCTCTTGCAGGGATGGAAAGGACGCATTGTCTATGCACTCTCTTCTTGGAGGGCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GRAS

Protein Analysis

736

Amino Acids

82.32

Weight (kDa)

5.75

Isoelectric Point (pI)

47.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GRAS PF03514 363 - 734 3.6e-122 GRAS domain family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1280
AarI CACCTGC 1 cut(s) 2017
AasI GACNNNNNNGTC 1 cut(s) 541
Acc36I ACCTGC 1 cut(s) 2017
AccB7I CCANNNNNTGG 1 cut(s) 1013
AccBSI CCGCTC 1 cut(s) 1924
AccI GTMKAC 3 cut(s) 533, 783, 1794
AccII CGCG 1 cut(s) 972
AccIII TCCGGA 2 cut(s) 916, 1918
AciI CCGC 6 cut(s) 182, 314, 374, 1162, 1547, 1924
AclWI GGATC 6 cut(s) 18, 51, 1172, 1258, 1523, 1665
AcoI YGGCCR 1 cut(s) 1951
AcsI RAATTY 5 cut(s) 35, 162, 196, 1360, 1693
AcuI CTGAAG 1 cut(s) 770
AfaI GTAC 5 cut(s) 117, 251, 469, 806, 1258
AfiI CCNNNNNNNGG 4 cut(s) 1013, 1037, 1532, 1546
AflII CTTAAG 1 cut(s) 1157
AflIII ACRYGT 1 cut(s) 1896
AhdI GACNNNNNGTC 1 cut(s) 2177
AhlI ACTAGT 1 cut(s) 470
AjiI CACGTC 1 cut(s) 1078
AjnI CCWGG 3 cut(s) 1483, 1531, 2070
AleI CACNNNNGTG 1 cut(s) 1633
Alw21I GWGCWC 2 cut(s) 611, 1114
Alw26I GTCTC 5 cut(s) 516, 632, 1475, 1556, 1721
Alw44I GTGCAC 1 cut(s) 1110
AlwI GGATC 6 cut(s) 18, 51, 1172, 1258, 1523, 1665
Aor13HI TCCGGA 2 cut(s) 916, 1918
AoxI GGCC 6 cut(s) 1028, 1451, 1481, 1489, 1951, 2143
ApaLI GTGCAC 1 cut(s) 1110
ApeKI GCWGC 6 cut(s) 326, 392, 1124, 1298, 1334, 2204
ApoI RAATTY 5 cut(s) 35, 162, 196, 1360, 1693
Asp700I GAANNNNTTC 1 cut(s) 668
AspS9I GGNCC 4 cut(s) 142, 1028, 1490, 2144
AsuC2I CCSGG 1 cut(s) 1955
AsuHPI GGTGA 3 cut(s) 968, 1142, 2041
AvaII GGWCC 1 cut(s) 142
BaeGI GKGCMC 3 cut(s) 1114, 1831, 1908
BanII GRGCYC 1 cut(s) 1276
Bbv12I GWGCWC 2 cut(s) 611, 1114
BbvI GCAGC 6 cut(s) 313, 379, 1136, 1285, 1321, 2191
BccI CCATC 7 cut(s) 197, 578, 1187, 1220, 1329, 2135, 2157
BciT130I CCWGG 3 cut(s) 1485, 1533, 2072
BciVI GTATCC 1 cut(s) 1402
BclI TGATCA 1 cut(s) 397
BcnI CCSGG 1 cut(s) 1955
BcoDI GTCTC 5 cut(s) 516, 632, 1475, 1556, 1721
BcuI ACTAGT 1 cut(s) 470
BfaI CTAG 5 cut(s) 77, 168, 471, 773, 1479
BfmI CTRYAG 3 cut(s) 327, 1299, 1822
BfrI CTTAAG 1 cut(s) 1157
BfuAI ACCTGC 1 cut(s) 2017
BfuI GTATCC 1 cut(s) 1402
BisI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1125, 1299, 1335, 2205
BlpI GCTNAGC 1 cut(s) 1576
BlsI GCNGC 9 cut(s) 183, 316, 328, 375, 394, 1126, 1300, 1336, 2206
BmcAI AGTACT 2 cut(s) 469, 806
Bme1390I CCNGG 4 cut(s) 1485, 1533, 1955, 2072
Bme18I GGWCC 1 cut(s) 142
BmeRI GACNNNNNGTC 1 cut(s) 2177
BmgBI CACGTC 1 cut(s) 1078
BmgT120I GGNCC 4 cut(s) 142, 1028, 1490, 2144
BmiI GGNNCC 5 cut(s) 568, 621, 1029, 1412, 1819
BmrFI CCNGG 4 cut(s) 1485, 1533, 1955, 2072
BmrI ACTGGG 1 cut(s) 1521
BmsI GCATC 4 cut(s) 252, 373, 748, 1188
BmuI ACTGGG 1 cut(s) 1521
Bpu1102I GCTNAGC 1 cut(s) 1576
BpuEI CTTGAG 3 cut(s) 40, 230, 1253
BpuMI CCSGG 1 cut(s) 1955
Bsa29I ATCGAT 1 cut(s) 1518
BsaJI CCNNGG 2 cut(s) 1048, 2147
BsaWI WCCGGW 3 cut(s) 916, 1183, 1918
BsaXI ACNNNNNCTCC 4 cut(s) 1913, 1943, 2032, 2062
Bsc4I CCNNNNNNNGG 4 cut(s) 1013, 1037, 1532, 1546
Bse1I ACTGG 4 cut(s) 465, 570, 1147, 1516
Bse3DI GCAATG 2 cut(s) 1968, 1971
BseAI TCCGGA 2 cut(s) 916, 1918
BseBI CCWGG 3 cut(s) 1485, 1533, 2072
BseCI ATCGAT 1 cut(s) 1518
BseDI CCNNGG 2 cut(s) 1048, 2147
BseGI GGATG 5 cut(s) 364, 545, 1203, 1932, 2168
BseLI CCNNNNNNNGG 4 cut(s) 1013, 1037, 1532, 1546
BseMI GCAATG 2 cut(s) 1968, 1971
BseMII CTCAG 3 cut(s) 542, 554, 1274
BseNI ACTGG 4 cut(s) 465, 570, 1147, 1516
BseRI GAGGAG 2 cut(s) 516, 1574
BseSI GKGCMC 3 cut(s) 1114, 1831, 1908
BseXI GCAGC 6 cut(s) 313, 379, 1136, 1285, 1321, 2191
BseYI CCCAGC 1 cut(s) 815
Bsh1236I CGCG 1 cut(s) 972
Bsh1285I CGRYCG 1 cut(s) 1672
BshFI GGCC 6 cut(s) 1030, 1453, 1483, 1491, 1953, 2145
BshVI ATCGAT 1 cut(s) 1518
BsiEI CGRYCG 1 cut(s) 1672
BsiHKAI GWGCWC 2 cut(s) 611, 1114
BsiSI CCGG 4 cut(s) 917, 1184, 1919, 1954
BslFI GGGAC 1 cut(s) 1652
BslI CCNNNNNNNGG 4 cut(s) 1013, 1037, 1532, 1546
BsmAI GTCTC 5 cut(s) 516, 632, 1475, 1556, 1721
BsmBI CGTCTC 1 cut(s) 1475
BsmFI GGGAC 1 cut(s) 1652
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 6 cut(s) 1030, 1453, 1483, 1491, 1953, 2145
Bsp1286I GDGCHC 5 cut(s) 611, 1114, 1276, 1831, 1908
Bsp13I TCCGGA 2 cut(s) 916, 1918
Bsp143I GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
Bsp1720I GCTNAGC 1 cut(s) 1576
Bsp68I TCGCGA 1 cut(s) 972
BspACI CCGC 6 cut(s) 182, 314, 374, 1162, 1547, 1924
BspANI GGCC 6 cut(s) 1030, 1453, 1483, 1491, 1953, 2145
BspCNI CTCAG 3 cut(s) 541, 553, 1273
BspDI ATCGAT 1 cut(s) 1518
BspEI TCCGGA 2 cut(s) 916, 1918
BspFNI CGCG 1 cut(s) 972
BspHI TCATGA 2 cut(s) 844, 2079
BspLI GGNNCC 5 cut(s) 568, 621, 1029, 1412, 1819
BspMAI CTGCAG 2 cut(s) 331, 1303
BspMI ACCTGC 1 cut(s) 2017
BspPI GGATC 6 cut(s) 18, 51, 1172, 1258, 1523, 1665
BspQI GCTCTTC 1 cut(s) 972
BspTI CTTAAG 1 cut(s) 1157
BsrBI CCGCTC 1 cut(s) 1924
BsrDI GCAATG 2 cut(s) 1968, 1971
BsrI ACTGG 4 cut(s) 465, 570, 1147, 1516
BssECI CCNNGG 2 cut(s) 1048, 2147
BssMI GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
Bst2UI CCWGG 3 cut(s) 1485, 1533, 2072
Bst4CI ACNGT 7 cut(s) 98, 142, 735, 947, 1105, 1732, 1826
Bst6I CTCTTC 4 cut(s) 814, 972, 1868, 2197
BstAFI CTTAAG 1 cut(s) 1157
BstAPI GCANNNNNTGC 3 cut(s) 323, 370, 1586
BstC8I GCNNGC 3 cut(s) 1176, 1213, 2106
BstDEI CTNAG 7 cut(s) 528, 540, 614, 1260, 1576, 1709, 2208
BstDSI CCRYGG 2 cut(s) 1048, 2147
BstF5I GGATG 5 cut(s) 364, 545, 1203, 1932, 2168
BstFNI CGCG 1 cut(s) 972
BstKTI GATC 9 cut(s) 13, 46, 400, 1167, 1253, 1518, 1660, 1672, 2079
BstMAI GTCTC 5 cut(s) 516, 632, 1475, 1556, 1721
BstMBI GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
BstMCI CGRYCG 1 cut(s) 1672
BstMWI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 745, 1124, 1244, 1586, 1826
BstNI CCWGG 3 cut(s) 1485, 1533, 2072
BstNSI RCATGY 5 cut(s) 301, 1178, 1891, 1900, 2108
BstSCI CCNGG 4 cut(s) 1483, 1531, 1953, 2070
BstSFI CTRYAG 3 cut(s) 327, 1299, 1822
BstSLI GKGCMC 3 cut(s) 1114, 1831, 1908
BstUI CGCG 1 cut(s) 972
BstV1I GCAGC 6 cut(s) 313, 379, 1136, 1285, 1321, 2191
BstX2I RGATCY 2 cut(s) 1250, 1657
BstYI RGATCY 2 cut(s) 1250, 1657
Bsu15I ATCGAT 1 cut(s) 1518
BsuI GTATCC 1 cut(s) 1402
BsuRI GGCC 6 cut(s) 1030, 1453, 1483, 1491, 1953, 2145
BsuTUI ATCGAT 1 cut(s) 1518
BtgI CCRYGG 2 cut(s) 1048, 2147
BtrI CACGTC 1 cut(s) 1078
BtsCI GGATG 5 cut(s) 364, 545, 1203, 1932, 2168
BtsI GCAGTG 1 cut(s) 2027
BtsIMutI CAGTG 3 cut(s) 731, 1831, 2027
BtuMI TCGCGA 1 cut(s) 972
BveI ACCTGC 1 cut(s) 2017
Cac8I GCNNGC 3 cut(s) 1176, 1213, 2106
CciI TCATGA 2 cut(s) 844, 2079
Cfr13I GGNCC 4 cut(s) 142, 1028, 1490, 2144
ClaI ATCGAT 1 cut(s) 1518
CpoI CGGWCCG 1 cut(s) 142
CseI GACGC 2 cut(s) 1581, 2181
Csp6I GTAC 5 cut(s) 116, 250, 468, 805, 1257
CspI CGGWCCG 1 cut(s) 142
CviQI GTAC 5 cut(s) 116, 250, 468, 805, 1257
DdeI CTNAG 7 cut(s) 528, 540, 614, 1260, 1576, 1709, 2208
DpnI GATC 9 cut(s) 12, 45, 399, 1166, 1252, 1517, 1659, 1671, 2078
DpnII GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
DraI TTTAAA 1 cut(s) 1600
DrdI GACNNNNNNGTC 1 cut(s) 541
DriI GACNNNNNGTC 1 cut(s) 2177
DseDI GACNNNNNNGTC 1 cut(s) 541
EaeI YGGCCR 1 cut(s) 1951
Eam1104I CTCTTC 4 cut(s) 814, 972, 1868, 2197
Eam1105I GACNNNNNGTC 1 cut(s) 2177
EarI CTCTTC 4 cut(s) 814, 972, 1868, 2197
Eco147I AGGCCT 1 cut(s) 1483
Eco24I GRGCYC 1 cut(s) 1276
Eco47I GGWCC 1 cut(s) 142
Eco57I CTGAAG 1 cut(s) 770
EcoRI GAATTC 3 cut(s) 35, 196, 1693
EcoRII CCWGG 3 cut(s) 1483, 1531, 2070
EcoT38I GRGCYC 1 cut(s) 1276
Esp3I CGTCTC 1 cut(s) 1475
FalI AAGNNNNNCTT 4 cut(s) 415, 447, 1195, 1227
FaqI GGGAC 1 cut(s) 1652
FbaI TGATCA 1 cut(s) 397
FblI GTMKAC 3 cut(s) 533, 783, 1794
Fnu4HI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1125, 1299, 1335, 2205
FokI GGATG 5 cut(s) 351, 532, 1210, 1939, 2175
FriOI GRGCYC 1 cut(s) 1276
Fsp4HI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1125, 1299, 1335, 2205
FspBI CTAG 5 cut(s) 77, 168, 471, 773, 1479
GluI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1125, 1299, 1335, 2205
GsaI CCCAGC 1 cut(s) 819
HaeIII GGCC 6 cut(s) 1030, 1453, 1483, 1491, 1953, 2145
HapII CCGG 4 cut(s) 917, 1184, 1919, 1954
HgaI GACGC 2 cut(s) 1581, 2181
HincII GTYRAC 1 cut(s) 534
HindII GTYRAC 1 cut(s) 534
HindIII AAGCTT 1 cut(s) 975
HpaII CCGG 4 cut(s) 917, 1184, 1919, 1954
HphI GGTGA 3 cut(s) 968, 1142, 2041
Hpy166II GTNNAC 5 cut(s) 534, 784, 950, 1112, 1795
Hpy8I GTNNAC 5 cut(s) 534, 784, 950, 1112, 1795
Hpy99I CGWCG 1 cut(s) 1575
HpyAV CCTTC 4 cut(s) 745, 857, 1306, 1843
HpyCH4III ACNGT 7 cut(s) 98, 142, 735, 947, 1105, 1732, 1826
HpyCH4IV ACGT 2 cut(s) 1077, 1468
HpyF10VI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 745, 1124, 1244, 1586, 1826
HpyF3I CTNAG 7 cut(s) 528, 540, 614, 1260, 1576, 1709, 2208
HpySE526I ACGT 2 cut(s) 1077, 1468
Kpn2I TCCGGA 2 cut(s) 916, 1918
Ksp22I TGATCA 1 cut(s) 397
Kzo9I GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
LguI GCTCTTC 1 cut(s) 972
LmnI GCTCC 6 cut(s) 529, 566, 1416, 1506, 1817, 1921
Lsp1109I GCAGC 6 cut(s) 313, 379, 1136, 1285, 1321, 2191
LweI GCATC 4 cut(s) 252, 373, 748, 1188
MaeI CTAG 5 cut(s) 77, 168, 471, 773, 1479
MaeII ACGT 2 cut(s) 1077, 1468
MaeIII GTNAC 3 cut(s) 572, 725, 875
MalI GATC 9 cut(s) 12, 45, 399, 1166, 1252, 1517, 1659, 1671, 2078
MbiI CCGCTC 1 cut(s) 1924
MboI GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
MflI RGATCY 2 cut(s) 1250, 1657
MhlI GDGCHC 5 cut(s) 611, 1114, 1276, 1831, 1908
MlyI GAGTC 5 cut(s) 53, 317, 379, 922, 1753
MmeI TCCRAC 2 cut(s) 12, 1564
MroI TCCGGA 2 cut(s) 916, 1918
MroXI GAANNNNTTC 1 cut(s) 668
MseI TTAA 8 cut(s) 507, 516, 660, 741, 777, 1158, 1599, 1662
MslI CAYNNNNRTG 4 cut(s) 129, 849, 1633, 1901
MspA1I CMGCKG 5 cut(s) 444, 908, 1127, 1298, 1547
MspCI CTTAAG 1 cut(s) 1157
MspI CCGG 4 cut(s) 917, 1184, 1919, 1954
MspR9I CCNGG 4 cut(s) 1485, 1533, 1955, 2072
Mva1269I GAATGC 1 cut(s) 835
MvaI CCWGG 3 cut(s) 1485, 1533, 2072
MvnI CGCG 1 cut(s) 972
MwoI GCNNNNNNNGC 8 cut(s) 323, 370, 450, 745, 1124, 1244, 1586, 1826
NciI CCSGG 1 cut(s) 1955
NdeII GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
NlaIV GGNNCC 5 cut(s) 568, 621, 1029, 1412, 1819
NmeAIII GCCGAG 1 cut(s) 1056
NruI TCGCGA 1 cut(s) 972
NspI RCATGY 5 cut(s) 301, 1178, 1891, 1900, 2108
OliI CACNNNNGTG 1 cut(s) 1633
PaeI GCATGC 2 cut(s) 1178, 2108
PagI TCATGA 2 cut(s) 844, 2079
PaqCI CACCTGC 1 cut(s) 2017
PceI AGGCCT 1 cut(s) 1483
PciI ACATGT 1 cut(s) 1896
PciSI GCTCTTC 1 cut(s) 972
PctI GAATGC 1 cut(s) 835
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 8 cut(s) 87, 209, 596, 644, 902, 959, 1783, 2035
PflMI CCANNNNNTGG 1 cut(s) 1013
PkrI GCNGC 9 cut(s) 183, 316, 328, 375, 394, 1126, 1300, 1336, 2206
Ple19I CGATCG 1 cut(s) 1672
PleI GAGTC 5 cut(s) 53, 316, 379, 921, 1752
PpsI GAGTC 5 cut(s) 53, 316, 379, 921, 1752
PscI ACATGT 1 cut(s) 1896
PsiI TTATAA 1 cut(s) 1280
Psp6I CCWGG 3 cut(s) 1483, 1531, 2070
PspFI CCCAGC 1 cut(s) 815
PspGI CCWGG 3 cut(s) 1483, 1531, 2070
PspN4I GGNNCC 5 cut(s) 568, 621, 1029, 1412, 1819
PspPI GGNCC 4 cut(s) 142, 1028, 1490, 2144
PstI CTGCAG 2 cut(s) 331, 1303
PsuI RGATCY 2 cut(s) 1250, 1657
PvuI CGATCG 1 cut(s) 1672
PvuII CAGCTG 4 cut(s) 444, 908, 1127, 1298
RruI TCGCGA 1 cut(s) 972
RsaI GTAC 5 cut(s) 117, 251, 469, 806, 1258
RsaNI GTAC 5 cut(s) 116, 250, 468, 805, 1257
RseI CAYNNNNRTG 4 cut(s) 129, 849, 1633, 1901
Rsr2I CGGWCCG 1 cut(s) 142
RsrII CGGWCCG 1 cut(s) 142
SalI GTCGAC 1 cut(s) 532
SapI GCTCTTC 1 cut(s) 972
SaqAI TTAA 8 cut(s) 507, 516, 660, 741, 777, 1158, 1599, 1662
SatI GCNGC 9 cut(s) 182, 315, 327, 374, 393, 1125, 1299, 1335, 2205
Sau3AI GATC 9 cut(s) 10, 43, 397, 1164, 1250, 1515, 1657, 1669, 2076
Sau96I GGNCC 4 cut(s) 142, 1028, 1490, 2144
ScaI AGTACT 2 cut(s) 469, 806
SchI GAGTC 5 cut(s) 53, 317, 379, 922, 1753
ScrFI CCNGG 4 cut(s) 1485, 1533, 1955, 2072
SduI GDGCHC 5 cut(s) 611, 1114, 1276, 1831, 1908
SfaNI GCATC 4 cut(s) 252, 373, 748, 1188
SfcI CTRYAG 3 cut(s) 327, 1299, 1822
SinI GGWCC 1 cut(s) 142
SmiMI CAYNNNNRTG 4 cut(s) 129, 849, 1633, 1901
SmlI CTYRAG 4 cut(s) 19, 245, 1157, 1232
SmoI CTYRAG 4 cut(s) 19, 245, 1157, 1232
SpeI ACTAGT 1 cut(s) 470
SphI GCATGC 2 cut(s) 1178, 2108
SseBI AGGCCT 1 cut(s) 1483
SsiI CCGC 6 cut(s) 182, 314, 374, 1162, 1547, 1924
SspMI CTAG 5 cut(s) 77, 168, 471, 773, 1479
StuI AGGCCT 1 cut(s) 1483
StyD4I CCNGG 4 cut(s) 1483, 1531, 1953, 2070
TaaI ACNGT 7 cut(s) 98, 142, 735, 947, 1105, 1732, 1826
TaiI ACGT 2 cut(s) 1080, 1471
TaqI TCGA 5 cut(s) 62, 533, 672, 1518, 1668
TatI WGTACW 3 cut(s) 249, 467, 804
TauI GCSGC 3 cut(s) 184, 317, 376
TfiI GAWTC 8 cut(s) 87, 209, 596, 644, 902, 959, 1783, 2035
Tru1I TTAA 8 cut(s) 507, 516, 660, 741, 777, 1158, 1599, 1662
Tru9I TTAA 8 cut(s) 507, 516, 660, 741, 777, 1158, 1599, 1662
TscAI CASTG 3 cut(s) 738, 1831, 2027
TseI GCWGC 6 cut(s) 326, 392, 1124, 1298, 1334, 2204
TspDTI ATGAA 9 cut(s) 209, 311, 423, 435, 546, 1400, 1796, 1979, 2151
TspRI CASTG 3 cut(s) 738, 1831, 2027
Van91I CCANNNNNTGG 1 cut(s) 1013
Vha464I CTTAAG 1 cut(s) 1157
VneI GTGCAC 1 cut(s) 1110
VpaK11BI GGWCC 1 cut(s) 142
XapI RAATTY 5 cut(s) 35, 162, 196, 1360, 1693
XceI RCATGY 5 cut(s) 301, 1178, 1891, 1900, 2108
XmiI GTMKAC 3 cut(s) 533, 783, 1794
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 5 cut(s) 77, 168, 471, 773, 1479
ZrmI AGTACT 2 cut(s) 469, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.