RchiOBHm_Chr1g0372801

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
61325554 .. 61331318
5765 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1602 bp
ATGCTATTGGCATTGCTTCAAAACTATCATATATGGATTCTCGAAATGCGAGTCGTTTCTTCCCTAGTTCTTTTGGGACTGGTTGGCTTCTTTCTTCATCTCTACAACACAGTCTGGTTGAAGTCCGTGAGGCTCCGAAGGAAGCTCCAAATGCAAGGCCTCAAAGGCCCTACACCTTCTTTGCTATATGGGAATCTCGCTGAGATGCAGAAAATCCAACTCCAAGCTCAGAAGTCTCCAAATCACTCTGAATTTGTAGCCCACGACTACACTTCCAGCCTCTTCCCGTATTTCGAACACTGGCGAAAAGAATACGGTTTAATTTACACGTATTCAACAGGATTGCGGCAGCATTTATATGTGAACCAACCAGAGCTAGTGAAGGAAATGAACCAGTGTAATAGTTTGGATTTGGGTAAGCCTTCCTATGTAAGCAAGAGACTTGCTCCCATGCTTGGAAATGGAATTCTCAGATCCAATGGCATATTTTGGTTACAACAAAGAAAAATTGTTGCACCTGAGTTTTTCACAGACAAAGTCAAGGCGATGGTAGGGTTGATGTTGGAGTCGGCGCAACCATTGCTTAGAAAATGGGAGGAGTGTATTGAAGTACAAGGAGGTATGAGAGCAGAGATTCAAGTAGATGAGCATTTAAGGGGTTTCTCAGCTGATGTTATCGCAAGGGCTTGTTTTGGGAGTTCTTATTCTAAGGGCAAAGAGATTTTCTCAAAGCTTAGAAGTCTTCAGGAAATAATGTCTCATCAACCATTCCTCTTTGGATCATTTTCTAATTTAGGAGGGTTGAAAAGGCAAAAGGAGATAAGTTGTTTAGAGAGAGAGATAGAGTCATTGATATGGGAAACTGTGAAAGAACGCGAACGAGAAGGGTTAGAGACTTCTTCGTCAGAAAAGGATCTATTGCAGTTAATATTAGTGGGAGCCATGAGTGACCAAAGCCTAGGCAAAGGCAAGGATTCATCCAAGCGATTCATTGTTGACAACTGCAAGAACATTTACTTTGCAGGGCATGAATCCACTGGTGTTGCTGCCTCTTGGTGTTTGATGCTACTCGCTTTACATCCCGAGTGGCAATCTCGAATCAGGACCGAGTTGGCAGAAGTTTGCCCCGATGGTCAGCTAGATGCTAATTCACTCGCTCAATTGAAAACGATAAATATGGTGATTCAAGAAGTCATGCGTCTATACCCACCAGCTGCTTTTGTGTCAAGAGAAGCACTTGAAGACACCCAGGTGGGAAACATAAGCATTCCGAAAGGGGTATACTTGTGGACTTTGATCCCAACATTGCACAGAGACACAGACATTTGGGGACAAGATGCAAATGAATTCAAACCTGAGAGGTTCATTGATGGTGTCTCAAAGGCTTGCAAGTTTCCTCAAGCCTATATCCCCTTTGGTTTGGGTCCTCGAACCTGTTTAGGCAAAAACTTTGCTATGGTACAATTGAAGGTTGTCCTCTCCCTCATTATCTCCAAGTTCACTTTCTCTCTATCACCCAAATACAGACACTCCCCTGCTTTCAAAATGATTGTAGAGCCTGGAAACGGTGTACATATTCTCATTCAAAAATCTCATCTGTAG

Protein Analysis

533

Amino Acids

60.6

Weight (kDa)

8.99

Isoelectric Point (pI)

43.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 93 - 512 8.1e-76 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 901
AccI GTMKAC 1 cut(s) 1281
AccII CGCG 1 cut(s) 876
AciI CCGC 1 cut(s) 346
AclWI GGATC 4 cut(s) 468, 787, 921, 1291
AcsI RAATTY 3 cut(s) 251, 465, 1346
AcuI CTGAAG 1 cut(s) 728
AfaI GTAC 3 cut(s) 612, 1461, 1572
AfiI CCNNNNNNNGG 2 cut(s) 455, 1565
AflIII ACRYGT 1 cut(s) 327
AjnI CCWGG 2 cut(s) 1248, 1558
AjuI GAANNNNNNNTTGG 2 cut(s) 1487, 1519
AleI CACNNNNGTG 1 cut(s) 1250
AluBI AGCT 7 cut(s) 145, 227, 376, 668, 733, 1138, 1214
AluI AGCT 7 cut(s) 145, 227, 376, 668, 733, 1138, 1214
Alw26I GTCTC 6 cut(s) 240, 433, 762, 887, 1308, 1381
AlwI GGATC 4 cut(s) 468, 787, 921, 1291
Ama87I CYCGRG 1 cut(s) 1082
AoxI GGCC 2 cut(s) 157, 166
ApeKI GCWGC 3 cut(s) 349, 1046, 1214
ApoI RAATTY 3 cut(s) 251, 465, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 36, 68
AspA2I CCTAGG 1 cut(s) 958
AspLEI GCGC 1 cut(s) 574
AspS9I GGNCC 3 cut(s) 167, 1104, 1424
AsuHPI GGTGA 2 cut(s) 1192, 1506
AsuII TTCGAA 1 cut(s) 294
AvaI CYCGRG 1 cut(s) 1082
AvaII GGWCC 2 cut(s) 1104, 1424
AvrII CCTAGG 1 cut(s) 958
BbsI GAAGAC 2 cut(s) 734, 1248
BbvI GCAGC 3 cut(s) 361, 1033, 1201
BccI CCATC 3 cut(s) 541, 1124, 1364
BciT130I CCWGG 2 cut(s) 1250, 1560
BcoDI GTCTC 6 cut(s) 240, 433, 762, 887, 1308, 1381
BfaI CTAG 4 cut(s) 65, 377, 959, 1139
BfmI CTRYAG 1 cut(s) 1598
BglI GCCNNNNNGGC 1 cut(s) 165
BisI GCNGC 4 cut(s) 347, 350, 1047, 1215
BlnI CCTAGG 1 cut(s) 958
BlsI GCNGC 4 cut(s) 348, 351, 1048, 1216
Bme1390I CCNGG 2 cut(s) 1250, 1560
Bme18I GGWCC 2 cut(s) 1104, 1424
BmeT110I CYCGRG 1 cut(s) 1082
BmgT120I GGNCC 3 cut(s) 167, 1104, 1424
BmiI GGNNCC 3 cut(s) 134, 940, 1425
BmrFI CCNGG 2 cut(s) 1250, 1560
BmsI GCATC 4 cut(s) 195, 1053, 1132, 1327
BpiI GAAGAC 2 cut(s) 734, 1248
BplI GAGNNNNNCTC 4 cut(s) 430, 462, 710, 742
Bpu14I TTCGAA 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 1383
BsaAI YACGTR 1 cut(s) 330
BsaJI CCNNGG 2 cut(s) 958, 1248
BsaXI ACNNNNNCTCC 2 cut(s) 1514, 1544
Bsc4I CCNNNNNNNGG 2 cut(s) 455, 1565
Bse1I ACTGG 4 cut(s) 84, 305, 394, 1042
Bse3DI GCAATG 3 cut(s) 11, 578, 1304
BseBI CCWGG 2 cut(s) 1250, 1560
BseDI CCNNGG 2 cut(s) 958, 1248
BseGI GGATG 2 cut(s) 977, 1078
BseLI CCNNNNNNNGG 2 cut(s) 455, 1565
BseMI GCAATG 3 cut(s) 11, 578, 1304
BseMII CTCAG 6 cut(s) 192, 242, 484, 510, 678, 1347
BseNI ACTGG 4 cut(s) 84, 305, 394, 1042
BseRI GAGGAG 1 cut(s) 611
BseXI GCAGC 3 cut(s) 361, 1033, 1201
Bsh1236I CGCG 1 cut(s) 876
BshFI GGCC 2 cut(s) 159, 168
BsiHKCI CYCGRG 1 cut(s) 1082
BslFI GGGAC 2 cut(s) 90, 1344
BslI CCNNNNNNNGG 2 cut(s) 455, 1565
BsmAI GTCTC 6 cut(s) 240, 433, 762, 887, 1308, 1381
BsmFI GGGAC 2 cut(s) 90, 1344
BsmI GAATGC 1 cut(s) 1266
BsnI GGCC 2 cut(s) 159, 168
BsoBI CYCGRG 1 cut(s) 1082
Bsp119I TTCGAA 1 cut(s) 294
Bsp1407I TGTACA 1 cut(s) 1570
Bsp143I GATC 4 cut(s) 473, 779, 913, 1296
BspACI CCGC 1 cut(s) 346
BspANI GGCC 2 cut(s) 159, 168
BspCNI CTCAG 6 cut(s) 193, 241, 483, 511, 677, 1348
BspFNI CGCG 1 cut(s) 876
BspLI GGNNCC 3 cut(s) 134, 940, 1425
BspPI GGATC 4 cut(s) 468, 787, 921, 1291
BspT104I TTCGAA 1 cut(s) 294
BsrDI GCAATG 3 cut(s) 11, 578, 1304
BsrGI TGTACA 1 cut(s) 1570
BsrI ACTGG 4 cut(s) 84, 305, 394, 1042
BssECI CCNNGG 2 cut(s) 958, 1248
BssMI GATC 4 cut(s) 473, 779, 913, 1296
BssNAI GTATAC 1 cut(s) 1282
BssT1I CCWWGG 1 cut(s) 958
Bst1107I GTATAC 1 cut(s) 1282
Bst2UI CCWGG 2 cut(s) 1250, 1560
Bst4CI ACNGT 4 cut(s) 112, 317, 865, 1568
Bst6I CTCTTC 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 580
BstAUI TGTACA 1 cut(s) 1570
BstBAI YACGTR 1 cut(s) 330
BstBI TTCGAA 1 cut(s) 294
BstC8I GCNNGC 1 cut(s) 1387
BstDEI CTNAG 9 cut(s) 201, 228, 470, 519, 584, 664, 708, 734, 1356
BstF5I GGATG 2 cut(s) 977, 1078
BstFNI CGCG 1 cut(s) 876
BstHHI GCGC 1 cut(s) 574
BstKTI GATC 4 cut(s) 476, 782, 916, 1299
BstMAI GTCTC 6 cut(s) 240, 433, 762, 887, 1308, 1381
BstMBI GATC 4 cut(s) 473, 779, 913, 1296
BstMWI GCNNNNNNNGC 3 cut(s) 151, 165, 580
BstNI CCWGG 2 cut(s) 1250, 1560
BstSCI CCNGG 2 cut(s) 1248, 1558
BstSFI CTRYAG 1 cut(s) 1598
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 3 cut(s) 361, 1033, 1201
BstV2I GAAGAC 2 cut(s) 734, 1248
BstX2I RGATCY 2 cut(s) 473, 913
BstYI RGATCY 2 cut(s) 473, 913
BstZ17I GTATAC 1 cut(s) 1282
BsuRI GGCC 2 cut(s) 159, 168
BtgZI GCGATG 1 cut(s) 560
BtsCI GGATG 2 cut(s) 977, 1078
BtsIMutI CAGTG 3 cut(s) 298, 401, 1035
Cac8I GCNNGC 1 cut(s) 1387
CfoI GCGC 1 cut(s) 574
Cfr13I GGNCC 3 cut(s) 167, 1104, 1424
CseI GACGC 1 cut(s) 1187
Csp6I GTAC 3 cut(s) 611, 1460, 1571
CspCI CAANNNNNGTGG 2 cut(s) 1024, 1059
CviAII CATG 4 cut(s) 451, 943, 1028, 1195
CviQI GTAC 3 cut(s) 611, 1460, 1571
DdeI CTNAG 9 cut(s) 201, 228, 470, 519, 584, 664, 708, 734, 1356
DpnI GATC 4 cut(s) 475, 781, 915, 1298
DpnII GATC 4 cut(s) 473, 779, 913, 1296
DrdI GACNNNNNNGTC 1 cut(s) 901
DseDI GACNNNNNNGTC 1 cut(s) 901
Eam1104I CTCTTC 1 cut(s) 287
EarI CTCTTC 1 cut(s) 287
Eco130I CCWWGG 1 cut(s) 958
Eco147I AGGCCT 1 cut(s) 159
Eco47I GGWCC 2 cut(s) 1104, 1424
Eco57I CTGAAG 1 cut(s) 728
Eco88I CYCGRG 1 cut(s) 1082
EcoO109I RGGNCCY 2 cut(s) 167, 1424
EcoRI GAATTC 2 cut(s) 465, 1346
EcoRII CCWGG 2 cut(s) 1248, 1558
EcoT14I CCWWGG 1 cut(s) 958
ErhI CCWWGG 1 cut(s) 958
FaeI CATG 4 cut(s) 454, 946, 1031, 1198
FaqI GGGAC 2 cut(s) 90, 1344
FatI CATG 4 cut(s) 450, 942, 1027, 1194
FblI GTMKAC 1 cut(s) 1281
Fnu4HI GCNGC 4 cut(s) 347, 350, 1047, 1215
FokI GGATG 2 cut(s) 964, 1065
Fsp4HI GCNGC 4 cut(s) 347, 350, 1047, 1215
FspBI CTAG 4 cut(s) 65, 377, 959, 1139
GlaI GCGC 1 cut(s) 573
GluI GCNGC 4 cut(s) 347, 350, 1047, 1215
HaeIII GGCC 2 cut(s) 159, 168
HgaI GACGC 1 cut(s) 1187
HhaI GCGC 1 cut(s) 574
Hin1II CATG 4 cut(s) 454, 946, 1031, 1198
Hin6I GCGC 1 cut(s) 572
HinP1I GCGC 1 cut(s) 572
HincII GTYRAC 1 cut(s) 997
HindII GTYRAC 1 cut(s) 997
HindIII AAGCTT 1 cut(s) 731
HphI GGTGA 2 cut(s) 1192, 1506
Hpy166II GTNNAC 6 cut(s) 364, 997, 1282, 1290, 1500, 1571
Hpy188I TCNGA 6 cut(s) 137, 231, 250, 473, 907, 1272
Hpy188III TCNNGA 7 cut(s) 41, 746, 1082, 1095, 1102, 1187, 1227
Hpy8I GTNNAC 6 cut(s) 364, 997, 1282, 1290, 1500, 1571
HpyAV CCTTC 6 cut(s) 132, 186, 376, 432, 878, 1462
HpyCH4III ACNGT 4 cut(s) 112, 317, 865, 1568
HpyCH4IV ACGT 1 cut(s) 329
HpyCH4V TGCA 9 cut(s) 154, 208, 515, 922, 1005, 1022, 1309, 1340, 1389
HpyF10VI GCNNNNNNNGC 3 cut(s) 151, 165, 580
HpyF3I CTNAG 9 cut(s) 201, 228, 470, 519, 584, 664, 708, 734, 1356
HpySE526I ACGT 1 cut(s) 329
Hsp92II CATG 4 cut(s) 454, 946, 1031, 1198
HspAI GCGC 1 cut(s) 572
Kzo9I GATC 4 cut(s) 473, 779, 913, 1296
LmnI GCTCC 4 cut(s) 138, 150, 451, 938
Lsp1109I GCAGC 3 cut(s) 361, 1033, 1201
LweI GCATC 4 cut(s) 195, 1053, 1132, 1327
MaeI CTAG 4 cut(s) 65, 377, 959, 1139
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 2 cut(s) 492, 947
MalI GATC 4 cut(s) 475, 781, 915, 1298
MboI GATC 4 cut(s) 473, 779, 913, 1296
MboII GAAGA 6 cut(s) 51, 86, 274, 734, 891, 1253
MfeI CAATTG 2 cut(s) 1160, 1463
MflI RGATCY 2 cut(s) 473, 913
MluCI AATT 9 cut(s) 251, 321, 465, 507, 790, 1147, 1160, 1346, 1463
MlyI GAGTC 3 cut(s) 60, 575, 854
MmeI TCCRAC 2 cut(s) 241, 543
MseI TTAA 3 cut(s) 320, 653, 926
MslI CAYNNNNRTG 3 cut(s) 357, 853, 1250
MspA1I CMGCKG 2 cut(s) 668, 1214
MspR9I CCNGG 2 cut(s) 1250, 1560
MunI CAATTG 2 cut(s) 1160, 1463
Mva1269I GAATGC 1 cut(s) 1266
MvaI CCWGG 2 cut(s) 1250, 1560
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 3 cut(s) 151, 165, 580
NdeII GATC 4 cut(s) 473, 779, 913, 1296
NlaIII CATG 4 cut(s) 454, 946, 1031, 1198
NlaIV GGNNCC 3 cut(s) 134, 940, 1425
NmuCI GTSAC 1 cut(s) 947
NspV TTCGAA 1 cut(s) 294
OliI CACNNNNGTG 1 cut(s) 1250
PceI AGGCCT 1 cut(s) 159
PctI GAATGC 1 cut(s) 1266
PfeI GAWTC 8 cut(s) 37, 193, 634, 974, 987, 1031, 1098, 1183
PflFI GACNNNGTC 1 cut(s) 536
PkrI GCNGC 4 cut(s) 348, 351, 1048, 1216
PleI GAGTC 3 cut(s) 59, 574, 853
PpsI GAGTC 3 cut(s) 59, 574, 853
Ppu21I YACGTR 1 cut(s) 330
PpuMI RGGWCCY 1 cut(s) 1424
Psp5II RGGWCCY 1 cut(s) 1424
Psp6I CCWGG 2 cut(s) 1248, 1558
PspGI CCWGG 2 cut(s) 1248, 1558
PspN4I GGNNCC 3 cut(s) 134, 940, 1425
PspPI GGNCC 3 cut(s) 167, 1104, 1424
PspPPI RGGWCCY 1 cut(s) 1424
PsuI RGATCY 2 cut(s) 473, 913
PsyI GACNNNGTC 1 cut(s) 536
PvuII CAGCTG 2 cut(s) 668, 1214
RsaI GTAC 3 cut(s) 612, 1461, 1572
RsaNI GTAC 3 cut(s) 611, 1460, 1571
RseI CAYNNNNRTG 3 cut(s) 357, 853, 1250
SaqAI TTAA 3 cut(s) 320, 653, 926
SatI GCNGC 4 cut(s) 347, 350, 1047, 1215
Sau3AI GATC 4 cut(s) 473, 779, 913, 1296
Sau96I GGNCC 3 cut(s) 167, 1104, 1424
SchI GAGTC 3 cut(s) 60, 575, 854
ScrFI CCNGG 2 cut(s) 1250, 1560
SfaNI GCATC 4 cut(s) 195, 1053, 1132, 1327
SfcI CTRYAG 1 cut(s) 1598
SfiI GGCCNNNNNGGCC 1 cut(s) 165
SfuI TTCGAA 1 cut(s) 294
SinI GGWCC 2 cut(s) 1104, 1424
SmiMI CAYNNNNRTG 3 cut(s) 357, 853, 1250
SmlI CTYRAG 1 cut(s) 1398
SmoI CTYRAG 1 cut(s) 1398
Sse9I AATT 9 cut(s) 251, 321, 465, 507, 790, 1147, 1160, 1346, 1463
SseBI AGGCCT 1 cut(s) 159
SsiI CCGC 1 cut(s) 346
SspI AATATT 1 cut(s) 930
SspMI CTAG 4 cut(s) 65, 377, 959, 1139
StuI AGGCCT 1 cut(s) 159
StyD4I CCNGG 2 cut(s) 1248, 1558
StyI CCWWGG 1 cut(s) 958
TaaI ACNGT 4 cut(s) 112, 317, 865, 1568
TaiI ACGT 1 cut(s) 332
TaqI TCGA 4 cut(s) 42, 294, 1096, 1429
TaqII GACCGA 1 cut(s) 1121
TasI AATT 9 cut(s) 251, 321, 465, 507, 790, 1147, 1160, 1346, 1463
TatI WGTACW 2 cut(s) 610, 1570
TauI GCSGC 1 cut(s) 349
TfiI GAWTC 8 cut(s) 37, 193, 634, 974, 987, 1031, 1098, 1183
Tru1I TTAA 3 cut(s) 320, 653, 926
Tru9I TTAA 3 cut(s) 320, 653, 926
TscAI CASTG 3 cut(s) 305, 401, 1042
TseFI GTSAC 1 cut(s) 947
TseI GCWGC 3 cut(s) 349, 1046, 1214
Tsp45I GTSAC 1 cut(s) 947
TspDTI ATGAA 7 cut(s) 86, 404, 966, 979, 1044, 1354, 1359
TspGWI ACGGA 1 cut(s) 115
TspRI CASTG 3 cut(s) 305, 401, 1042
Tth111I GACNNNGTC 1 cut(s) 536
VpaK11BI GGWCC 2 cut(s) 1104, 1424
XapI RAATTY 3 cut(s) 251, 465, 1346
XmaJI CCTAGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 1281
XspI CTAG 4 cut(s) 65, 377, 959, 1139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.