RchiOBHm_Chr0c32g0501641

methionine sulfoxide reductase

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 204 bp
ATGCAGAAGTTTGAGCTGAAGCGCAGGCCAGTCCTTCTTCAACTAATGGGAAACTTGCCTGAAGAGGAACTTGAGAGGTCACATTTGGCAGCGAAACTGAATAGCTATGCTGCAGAGCTTTGCCCTCCAAATATTCAGAAGAAGATTGATGTAAAGATCACTGAGATTATTAAAAAAGGATGGCCAATTTTGAGTGACTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.74

Weight (kDa)

8.85

Isoelectric Point (pI)

71.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 182
AcuI CTGAAG 2 cut(s) 38, 81
AgsI TTSAA 1 cut(s) 41
AluBI AGCT 3 cut(s) 16, 105, 118
AluI AGCT 3 cut(s) 16, 105, 118
AoxI GGCC 2 cut(s) 26, 182
ApeKI GCWGC 2 cut(s) 89, 110
AspLEI GCGC 1 cut(s) 24
BalI TGGCCA 1 cut(s) 184
BbvI GCAGC 2 cut(s) 97, 101
BccI CCATC 1 cut(s) 174
BfmI CTRYAG 1 cut(s) 111
BisI GCNGC 2 cut(s) 90, 111
BlsI GCNGC 2 cut(s) 91, 112
BpuEI CTTGAG 1 cut(s) 92
Bse1I ACTGG 1 cut(s) 29
BseGI GGATG 1 cut(s) 185
BseMII CTCAG 1 cut(s) 153
BseNI ACTGG 1 cut(s) 29
BseXI GCAGC 2 cut(s) 97, 101
BshFI GGCC 2 cut(s) 28, 184
BsnI GGCC 2 cut(s) 28, 184
Bsp143I GATC 1 cut(s) 156
BspANI GGCC 2 cut(s) 28, 184
BspCNI CTCAG 1 cut(s) 154
BspMAI CTGCAG 1 cut(s) 115
BsrI ACTGG 1 cut(s) 29
BssMI GATC 1 cut(s) 156
Bst6I CTCTTC 1 cut(s) 57
BstC8I GCNNGC 1 cut(s) 26
BstDEI CTNAG 1 cut(s) 162
BstF5I GGATG 1 cut(s) 185
BstHHI GCGC 1 cut(s) 24
BstKTI GATC 1 cut(s) 159
BstMBI GATC 1 cut(s) 156
BstSFI CTRYAG 1 cut(s) 111
BstV1I GCAGC 2 cut(s) 97, 101
BsuRI GGCC 2 cut(s) 28, 184
BtsCI GGATG 1 cut(s) 185
BtsIMutI CAGTG 1 cut(s) 159
Cac8I GCNNGC 1 cut(s) 26
CfoI GCGC 1 cut(s) 24
CviJI RGCY 5 cut(s) 16, 28, 105, 118, 184
CviKI_1 RGCY 5 cut(s) 16, 28, 105, 118, 184
DdeI CTNAG 1 cut(s) 162
DpnI GATC 1 cut(s) 158
DpnII GATC 1 cut(s) 156
EaeI YGGCCR 1 cut(s) 182
Eam1104I CTCTTC 1 cut(s) 57
EarI CTCTTC 1 cut(s) 57
Eco57I CTGAAG 2 cut(s) 38, 81
FaiI YATR 1 cut(s) 108
FalI AAGNNNNNCTT 2 cut(s) 54, 86
Fnu4HI GCNGC 2 cut(s) 90, 111
FokI GGATG 1 cut(s) 192
Fsp4HI GCNGC 2 cut(s) 90, 111
GlaI GCGC 1 cut(s) 23
GluI GCNGC 2 cut(s) 90, 111
HaeIII GGCC 2 cut(s) 28, 184
HhaI GCGC 1 cut(s) 24
Hin6I GCGC 1 cut(s) 22
HinP1I GCGC 1 cut(s) 22
Hpy188I TCNGA 1 cut(s) 138
HpyAV CCTTC 1 cut(s) 44
HpyCH4V TGCA 2 cut(s) 4, 113
HpyF3I CTNAG 1 cut(s) 162
HspAI GCGC 1 cut(s) 22
Kzo9I GATC 1 cut(s) 156
LpnPI CCDG 3 cut(s) 10, 42, 72
Lsp1109I GCAGC 2 cut(s) 97, 101
MaeIII GTNAC 2 cut(s) 78, 194
MalI GATC 1 cut(s) 158
MboI GATC 1 cut(s) 156
MboII GAAGA 4 cut(s) 29, 74, 151, 154
MlsI TGGCCA 1 cut(s) 184
MluCI AATT 1 cut(s) 186
MluNI TGGCCA 1 cut(s) 184
MnlI CCTC 3 cut(s) 58, 69, 135
Mox20I TGGCCA 1 cut(s) 184
MscI TGGCCA 1 cut(s) 184
MseI TTAA 1 cut(s) 171
Msp20I TGGCCA 1 cut(s) 184
NdeII GATC 1 cut(s) 156
NmuCI GTSAC 2 cut(s) 78, 194
PkrI GCNGC 2 cut(s) 91, 112
PstI CTGCAG 1 cut(s) 115
SaqAI TTAA 1 cut(s) 171
SatI GCNGC 2 cut(s) 90, 111
Sau3AI GATC 1 cut(s) 156
SetI ASST 4 cut(s) 18, 80, 107, 120
SfcI CTRYAG 1 cut(s) 111
SgeI CNNG 5 cut(s) 37, 41, 67, 71, 83
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
Sse9I AATT 1 cut(s) 186
SspI AATATT 1 cut(s) 133
TasI AATT 1 cut(s) 186
Tru1I TTAA 1 cut(s) 171
Tru9I TTAA 1 cut(s) 171
TscAI CASTG 1 cut(s) 166
TseFI GTSAC 2 cut(s) 78, 194
TseI GCWGC 2 cut(s) 89, 110
Tsp45I GTSAC 2 cut(s) 78, 194
TspRI CASTG 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.