E3 ubiquitin-protein ligase XBAT31
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g30290 |
| rosa_chinensis | RchiOBHm_Chr1g0313891 RchiOBHm_Chr5g0035641 |
| rosa_laevigata | RLG00000028647 RLG00000028655 |
| rosa_multiflora | Rmu_sc0001493.1_g000070 Rmu_sc0019734.1_g000002 |
| rosa_samantha | Rh3AG278700 Rh4DG183500 Rh4DG183800 Rh5CG517100 Rh5DG450200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 21 |
| AcoI | YGGCCR | 1 cut(s) | 97 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 106 |
| AjnI | CCWGG | 1 cut(s) | 69 |
| AluBI | AGCT | 1 cut(s) | 92 |
| AluI | AGCT | 1 cut(s) | 92 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 13 |
| AoxI | GGCC | 2 cut(s) | 51, 97 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| AspS9I | GGNCC | 1 cut(s) | 51 |
| BalI | TGGCCA | 1 cut(s) | 99 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BciT130I | CCWGG | 1 cut(s) | 71 |
| BisI | GCNGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 1 cut(s) | 71 |
| BmgT120I | GGNCC | 1 cut(s) | 51 |
| BmiI | GGNNCC | 1 cut(s) | 68 |
| BmrFI | CCNGG | 1 cut(s) | 71 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseBI | CCWGG | 1 cut(s) | 71 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BsgI | GTGCAG | 1 cut(s) | 108 |
| BshFI | GGCC | 2 cut(s) | 53, 99 |
| BslFI | GGGAC | 1 cut(s) | 24 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 106 |
| BsmFI | GGGAC | 1 cut(s) | 24 |
| BsnI | GGCC | 2 cut(s) | 53, 99 |
| Bsp143I | GATC | 2 cut(s) | 102, 154 |
| BspACI | CCGC | 1 cut(s) | 21 |
| BspANI | GGCC | 2 cut(s) | 53, 99 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BspLI | GGNNCC | 1 cut(s) | 68 |
| BspQI | GCTCTTC | 1 cut(s) | 81 |
| BssMI | GATC | 2 cut(s) | 102, 154 |
| Bst2UI | CCWGG | 1 cut(s) | 71 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstKTI | GATC | 2 cut(s) | 105, 157 |
| BstMBI | GATC | 2 cut(s) | 102, 154 |
| BstNI | CCWGG | 1 cut(s) | 71 |
| BstSCI | CCNGG | 1 cut(s) | 69 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BsuRI | GGCC | 2 cut(s) | 53, 99 |
| CaiI | CAGNNNCTG | 1 cut(s) | 13 |
| Cfr13I | GGNCC | 1 cut(s) | 51 |
| CviAII | CATG | 2 cut(s) | 38, 55 |
| CviJI | RGCY | 5 cut(s) | 43, 53, 74, 92, 99 |
| CviKI_1 | RGCY | 5 cut(s) | 43, 53, 74, 92, 99 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 2 cut(s) | 104, 156 |
| DpnII | GATC | 2 cut(s) | 102, 154 |
| EaeI | YGGCCR | 1 cut(s) | 97 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| EcoRII | CCWGG | 1 cut(s) | 69 |
| FaeI | CATG | 2 cut(s) | 41, 58 |
| FaiI | YATR | 5 cut(s) | 39, 56, 81, 124, 160 |
| FaqI | GGGAC | 1 cut(s) | 24 |
| FatI | CATG | 2 cut(s) | 37, 54 |
| Fnu4HI | GCNGC | 1 cut(s) | 90 |
| Fsp4HI | GCNGC | 1 cut(s) | 90 |
| GluI | GCNGC | 1 cut(s) | 90 |
| HaeIII | GGCC | 2 cut(s) | 53, 99 |
| Hin1II | CATG | 2 cut(s) | 41, 58 |
| HinfI | GANTC | 1 cut(s) | 132 |
| HpyCH4V | TGCA | 2 cut(s) | 58, 89 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 41, 58 |
| Kzo9I | GATC | 2 cut(s) | 102, 154 |
| LguI | GCTCTTC | 1 cut(s) | 81 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 4 cut(s) | 34, 56, 83, 113 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| MaeIII | GTNAC | 1 cut(s) | 29 |
| MalI | GATC | 2 cut(s) | 104, 156 |
| MboI | GATC | 2 cut(s) | 102, 154 |
| MboII | GAAGA | 2 cut(s) | 68, 108 |
| MlsI | TGGCCA | 1 cut(s) | 99 |
| MluNI | TGGCCA | 1 cut(s) | 99 |
| MmeI | TCCRAC | 1 cut(s) | 128 |
| MnlI | CCTC | 1 cut(s) | 100 |
| Mox20I | TGGCCA | 1 cut(s) | 99 |
| MscI | TGGCCA | 1 cut(s) | 99 |
| MslI | CAYNNNNRTG | 1 cut(s) | 84 |
| Msp20I | TGGCCA | 1 cut(s) | 99 |
| MspR9I | CCNGG | 1 cut(s) | 71 |
| MvaI | CCWGG | 1 cut(s) | 71 |
| NdeII | GATC | 2 cut(s) | 102, 154 |
| NlaIII | CATG | 2 cut(s) | 41, 58 |
| NlaIV | GGNNCC | 1 cut(s) | 68 |
| NmuCI | GTSAC | 1 cut(s) | 29 |
| PciSI | GCTCTTC | 1 cut(s) | 81 |
| PfeI | GAWTC | 1 cut(s) | 132 |
| PkrI | GCNGC | 1 cut(s) | 91 |
| Psp6I | CCWGG | 1 cut(s) | 69 |
| PspGI | CCWGG | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 1 cut(s) | 68 |
| PspPI | GGNCC | 1 cut(s) | 51 |
| PstNI | CAGNNNCTG | 1 cut(s) | 13 |
| RseI | CAYNNNNRTG | 1 cut(s) | 84 |
| SapI | GCTCTTC | 1 cut(s) | 81 |
| SatI | GCNGC | 1 cut(s) | 90 |
| Sau3AI | GATC | 2 cut(s) | 102, 154 |
| Sau96I | GGNCC | 1 cut(s) | 51 |
| ScrFI | CCNGG | 1 cut(s) | 71 |
| SetI | ASST | 3 cut(s) | 72, 94, 111 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 84 |
| SsiI | CCGC | 1 cut(s) | 21 |
| StyD4I | CCNGG | 1 cut(s) | 69 |
| TaqI | TCGA | 2 cut(s) | 105, 130 |
| TfiI | GAWTC | 1 cut(s) | 132 |
| TseFI | GTSAC | 1 cut(s) | 29 |
| TseI | GCWGC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 29 |
| TspDTI | ATGAA | 1 cut(s) | 68 |