E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom15g30290 |
| rosa_chinensis | RchiOBHm_Chr1g0313891 RchiOBHm_Chr5g0035641 |
| rosa_laevigata | RLG00000028647 RLG00000028655 |
| rosa_multiflora | Rmu_sc0001493.1_g000070 Rmu_sc0019734.1_g000002 |
| rosa_samantha | Rh3AG278700 Rh4DG183500 Rh4DG183800 Rh5CG517100 Rh5DG450200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 21 |
| AcuI | CTGAAG | 1 cut(s) | 31 |
| AfeI | AGCGCT | 1 cut(s) | 52 |
| AgsI | TTSAA | 1 cut(s) | 226 |
| Alw26I | GTCTC | 2 cut(s) | 68, 93 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 13, 244 |
| Aor51HI | AGCGCT | 1 cut(s) | 52 |
| ApeKI | GCWGC | 1 cut(s) | 158 |
| AspLEI | GCGC | 1 cut(s) | 53 |
| BanII | GRGCYC | 1 cut(s) | 45 |
| BbvI | GCAGC | 1 cut(s) | 145 |
| BccI | CCATC | 1 cut(s) | 73 |
| BcoDI | GTCTC | 2 cut(s) | 68, 93 |
| BfoI | RGCGCY | 1 cut(s) | 54 |
| BisI | GCNGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 1 cut(s) | 160 |
| BmsI | GCATC | 2 cut(s) | 124, 208 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 86, 118 |
| Bse118I | RCCGGY | 1 cut(s) | 265 |
| BseMII | CTCAG | 1 cut(s) | 5 |
| BseXI | GCAGC | 1 cut(s) | 145 |
| BsiSI | CCGG | 1 cut(s) | 266 |
| BslFI | GGGAC | 2 cut(s) | 24, 80 |
| BsmAI | GTCTC | 2 cut(s) | 68, 93 |
| BsmBI | CGTCTC | 1 cut(s) | 68 |
| BsmFI | GGGAC | 2 cut(s) | 24, 80 |
| Bsp1286I | GDGCHC | 1 cut(s) | 45 |
| Bsp143I | GATC | 3 cut(s) | 133, 174, 203 |
| BspACI | CCGC | 1 cut(s) | 21 |
| BspCNI | CTCAG | 1 cut(s) | 6 |
| BspQI | GCTCTTC | 1 cut(s) | 50 |
| BsrFI | RCCGGY | 1 cut(s) | 265 |
| BssAI | RCCGGY | 1 cut(s) | 265 |
| BssMI | GATC | 3 cut(s) | 133, 174, 203 |
| Bst6I | CTCTTC | 1 cut(s) | 50 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 244 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstH2I | RGCGCY | 1 cut(s) | 54 |
| BstHHI | GCGC | 1 cut(s) | 53 |
| BstKTI | GATC | 3 cut(s) | 136, 177, 206 |
| BstMAI | GTCTC | 2 cut(s) | 68, 93 |
| BstMBI | GATC | 3 cut(s) | 133, 174, 203 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 244, 271 |
| BstV1I | GCAGC | 1 cut(s) | 145 |
| BtsI | GCAGTG | 1 cut(s) | 302 |
| BtsIMutI | CAGTG | 1 cut(s) | 302 |
| CaiI | CAGNNNCTG | 2 cut(s) | 13, 244 |
| CfoI | GCGC | 1 cut(s) | 53 |
| Cfr10I | RCCGGY | 1 cut(s) | 265 |
| CviAII | CATG | 2 cut(s) | 38, 127 |
| CviJI | RGCY | 4 cut(s) | 43, 86, 107, 274 |
| CviKI_1 | RGCY | 4 cut(s) | 43, 86, 107, 274 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 3 cut(s) | 135, 176, 205 |
| DpnII | GATC | 3 cut(s) | 133, 174, 203 |
| Eam1104I | CTCTTC | 1 cut(s) | 50 |
| EarI | CTCTTC | 1 cut(s) | 50 |
| Eco24I | GRGCYC | 1 cut(s) | 45 |
| Eco47III | AGCGCT | 1 cut(s) | 52 |
| Eco57I | CTGAAG | 1 cut(s) | 31 |
| EcoT38I | GRGCYC | 1 cut(s) | 45 |
| Esp3I | CGTCTC | 1 cut(s) | 68 |
| FaeI | CATG | 2 cut(s) | 41, 130 |
| FaiI | YATR | 5 cut(s) | 39, 128, 132, 153, 285 |
| FaqI | GGGAC | 2 cut(s) | 24, 80 |
| FatI | CATG | 2 cut(s) | 37, 126 |
| Fnu4HI | GCNGC | 1 cut(s) | 159 |
| FriOI | GRGCYC | 1 cut(s) | 45 |
| Fsp4HI | GCNGC | 1 cut(s) | 159 |
| GlaI | GCGC | 1 cut(s) | 52 |
| GluI | GCNGC | 1 cut(s) | 159 |
| HaeII | RGCGCY | 1 cut(s) | 54 |
| HapII | CCGG | 1 cut(s) | 266 |
| HhaI | GCGC | 1 cut(s) | 53 |
| Hin1II | CATG | 2 cut(s) | 41, 130 |
| Hin6I | GCGC | 1 cut(s) | 51 |
| HinP1I | GCGC | 1 cut(s) | 51 |
| HinfI | GANTC | 4 cut(s) | 101, 181, 226, 241 |
| HpaII | CCGG | 1 cut(s) | 266 |
| Hpy188I | TCNGA | 2 cut(s) | 174, 305 |
| Hpy188III | TCNNGA | 2 cut(s) | 178, 215 |
| HpyCH4V | TGCA | 2 cut(s) | 58, 115 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 244, 271 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 41, 130 |
| HspAI | GCGC | 1 cut(s) | 51 |
| Kzo9I | GATC | 3 cut(s) | 133, 174, 203 |
| LguI | GCTCTTC | 1 cut(s) | 50 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 3 cut(s) | 228, 271, 279 |
| Lsp1109I | GCAGC | 1 cut(s) | 145 |
| LweI | GCATC | 2 cut(s) | 124, 208 |
| MaeIII | GTNAC | 3 cut(s) | 29, 137, 230 |
| MalI | GATC | 3 cut(s) | 135, 176, 205 |
| MboI | GATC | 3 cut(s) | 133, 174, 203 |
| MboII | GAAGA | 2 cut(s) | 37, 272 |
| MhlI | GDGCHC | 1 cut(s) | 45 |
| MlyI | GAGTC | 2 cut(s) | 95, 235 |
| MmeI | TCCRAC | 2 cut(s) | 177, 277 |
| MnlI | CCTC | 3 cut(s) | 76, 172, 281 |
| MslI | CAYNNNNRTG | 1 cut(s) | 125 |
| MspI | CCGG | 1 cut(s) | 266 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 244, 271 |
| NdeII | GATC | 3 cut(s) | 133, 174, 203 |
| NlaIII | CATG | 2 cut(s) | 41, 130 |
| NmeAIII | GCCGAG | 1 cut(s) | 83 |
| NmuCI | GTSAC | 3 cut(s) | 29, 137, 230 |
| PciSI | GCTCTTC | 1 cut(s) | 50 |
| PfeI | GAWTC | 2 cut(s) | 181, 226 |
| PkrI | GCNGC | 1 cut(s) | 160 |
| PleI | GAGTC | 2 cut(s) | 95, 235 |
| PpsI | GAGTC | 2 cut(s) | 95, 235 |
| PstNI | CAGNNNCTG | 2 cut(s) | 13, 244 |
| RseI | CAYNNNNRTG | 1 cut(s) | 125 |
| SapI | GCTCTTC | 1 cut(s) | 50 |
| SatI | GCNGC | 1 cut(s) | 159 |
| Sau3AI | GATC | 3 cut(s) | 133, 174, 203 |
| SchI | GAGTC | 2 cut(s) | 95, 235 |
| SduI | GDGCHC | 1 cut(s) | 45 |
| SfaNI | GCATC | 2 cut(s) | 124, 208 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 125 |
| SsiI | CCGC | 1 cut(s) | 21 |
| TaqI | TCGA | 1 cut(s) | 177 |
| TfiI | GAWTC | 2 cut(s) | 181, 226 |
| TscAI | CASTG | 1 cut(s) | 302 |
| TseFI | GTSAC | 3 cut(s) | 29, 137, 230 |
| TseI | GCWGC | 1 cut(s) | 158 |
| Tsp45I | GTSAC | 3 cut(s) | 29, 137, 230 |
| TspDTI | ATGAA | 2 cut(s) | 140, 272 |
| TspRI | CASTG | 1 cut(s) | 302 |