RchiOBHm_Chr1g0320251

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
7902414 .. 7903064
651 bp
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UTR
Exon/CDS
Intron
PRQ55042

Sequence Viewer

Length: 177 bp
ATGCATAAGGGATTCACATTGTGGAAGGAGAAAAGTACCATTCGGCTTACATGTCTTATGATCTTTTTGATGCACATTTTATTCCTCTTGGCTGGCAATAGCTGCACTAATTTAATCGCATTGTACAATCCATACTATATTCCTTTTGAACATGCTGTAAGGTTTATTATTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.86

Weight (kDa)

9.18

Isoelectric Point (pI)

64.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 21
AfaI GTAC 2 cut(s) 37, 125
AflIII ACRYGT 1 cut(s) 50
AgsI TTSAA 1 cut(s) 149
AluBI AGCT 1 cut(s) 102
AluI AGCT 1 cut(s) 102
ApeKI GCWGC 1 cut(s) 102
BbvI GCAGC 1 cut(s) 89
BisI GCNGC 1 cut(s) 103
BlsI GCNGC 1 cut(s) 104
BmsI GCATC 1 cut(s) 60
BseXI GCAGC 1 cut(s) 89
BsgI GTGCAG 1 cut(s) 88
Bsp1407I TGTACA 1 cut(s) 123
Bsp143I GATC 1 cut(s) 60
BsrGI TGTACA 1 cut(s) 123
BssMI GATC 1 cut(s) 60
BstAPI GCANNNNNTGC 1 cut(s) 102
BstAUI TGTACA 1 cut(s) 123
BstC8I GCNNGC 1 cut(s) 94
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 102
BstNSI RCATGY 2 cut(s) 54, 155
BstV1I GCAGC 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 94
Csp6I GTAC 2 cut(s) 36, 124
CviAII CATG 2 cut(s) 51, 152
CviJI RGCY 3 cut(s) 46, 92, 102
CviKI_1 RGCY 3 cut(s) 46, 92, 102
CviQI GTAC 2 cut(s) 36, 124
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
DraIII CACNNNGTG 1 cut(s) 21
EcoT22I ATGCAT 1 cut(s) 6
FaeI CATG 2 cut(s) 54, 155
FaiI YATR 6 cut(s) 6, 52, 59, 133, 138, 153
FatI CATG 2 cut(s) 50, 151
Fnu4HI GCNGC 1 cut(s) 103
Fsp4HI GCNGC 1 cut(s) 103
GluI GCNGC 1 cut(s) 103
Hin1II CATG 2 cut(s) 54, 155
HinfI GANTC 1 cut(s) 12
HpyAV CCTTC 1 cut(s) 19
HpyCH4V TGCA 3 cut(s) 4, 73, 105
HpyF10VI GCNNNNNNNGC 1 cut(s) 102
Hsp92II CATG 2 cut(s) 54, 155
Kzo9I GATC 1 cut(s) 60
LpnPI CCDG 1 cut(s) 78
Lsp1109I GCAGC 1 cut(s) 89
LweI GCATC 1 cut(s) 60
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MluCI AATT 1 cut(s) 109
MnlI CCTC 1 cut(s) 95
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 113
MwoI GCNNNNNNNGC 1 cut(s) 102
NdeII GATC 1 cut(s) 60
NlaIII CATG 2 cut(s) 54, 155
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 2 cut(s) 54, 155
PciI ACATGT 1 cut(s) 50
PfeI GAWTC 1 cut(s) 12
PkrI GCNGC 1 cut(s) 104
PscI ACATGT 1 cut(s) 50
RsaI GTAC 2 cut(s) 37, 125
RsaNI GTAC 2 cut(s) 36, 124
SaqAI TTAA 1 cut(s) 113
SatI GCNGC 1 cut(s) 103
Sau3AI GATC 1 cut(s) 60
SetI ASST 2 cut(s) 104, 164
SfaNI GCATC 1 cut(s) 60
SgeI CNNG 4 cut(s) 63, 100, 105, 164
Sse9I AATT 1 cut(s) 109
TasI AATT 1 cut(s) 109
TatI WGTACW 1 cut(s) 123
TfiI GAWTC 1 cut(s) 12
Tru1I TTAA 1 cut(s) 113
Tru9I TTAA 1 cut(s) 113
TseI GCWGC 1 cut(s) 102
XceI RCATGY 2 cut(s) 54, 155
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.