No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom07g26310 |
| rosa_chinensis | RchiOBHm_Chr1g0320251 |
| rosa_laevigata | RLG00000022558 RLG00000035271 |
| rosa_multiflora | Rmu_sc0001104.1_g000011 Rmu_sc0003833.1_g000001 Rmu_sc0006031.1_g000007 Rmu_sc0007663.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00030370 Rroxscaffold_5G00367100 |
| rosa_samantha | Rh1BG166400 Rh1BG317900 Rh2BG294000 Rh4BG156000 Rh4CG143100 Rh6AG144200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 212 |
| AclWI | GGATC | 1 cut(s) | 188 |
| AcsI | RAATTY | 1 cut(s) | 77 |
| AfaI | GTAC | 1 cut(s) | 43 |
| Alw26I | GTCTC | 1 cut(s) | 58 |
| AlwI | GGATC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 119 |
| ApoI | RAATTY | 1 cut(s) | 77 |
| AsuII | TTCGAA | 1 cut(s) | 33 |
| BbvI | GCAGC | 1 cut(s) | 106 |
| BccI | CCATC | 1 cut(s) | 150 |
| BcoDI | GTCTC | 1 cut(s) | 58 |
| BfaI | CTAG | 3 cut(s) | 45, 69, 177 |
| BisI | GCNGC | 1 cut(s) | 120 |
| BlsI | GCNGC | 1 cut(s) | 121 |
| BmsI | GCATC | 1 cut(s) | 139 |
| BpmI | CTGGAG | 1 cut(s) | 120 |
| Bpu14I | TTCGAA | 1 cut(s) | 33 |
| BsaI | GGTCTC | 1 cut(s) | 58 |
| BseMII | CTCAG | 1 cut(s) | 131 |
| BseXI | GCAGC | 1 cut(s) | 106 |
| BsgI | GTGCAG | 1 cut(s) | 105 |
| BsmAI | GTCTC | 1 cut(s) | 58 |
| Bso31I | GGTCTC | 1 cut(s) | 58 |
| Bsp119I | TTCGAA | 1 cut(s) | 33 |
| Bsp143I | GATC | 1 cut(s) | 193 |
| BspCNI | CTCAG | 1 cut(s) | 132 |
| BspPI | GGATC | 1 cut(s) | 188 |
| BspT104I | TTCGAA | 1 cut(s) | 33 |
| BspTNI | GGTCTC | 1 cut(s) | 58 |
| BssMI | GATC | 1 cut(s) | 193 |
| BstBI | TTCGAA | 1 cut(s) | 33 |
| BstDEI | CTNAG | 1 cut(s) | 140 |
| BstKTI | GATC | 1 cut(s) | 196 |
| BstMAI | GTCTC | 1 cut(s) | 58 |
| BstMBI | GATC | 1 cut(s) | 193 |
| BstV1I | GCAGC | 1 cut(s) | 106 |
| Csp6I | GTAC | 1 cut(s) | 42 |
| CviJI | RGCY | 2 cut(s) | 105, 144 |
| CviKI_1 | RGCY | 2 cut(s) | 105, 144 |
| CviQI | GTAC | 1 cut(s) | 42 |
| DdeI | CTNAG | 1 cut(s) | 140 |
| DpnI | GATC | 1 cut(s) | 195 |
| DpnII | GATC | 1 cut(s) | 193 |
| Eco31I | GGTCTC | 1 cut(s) | 58 |
| Eco32I | GATATC | 1 cut(s) | 163 |
| EcoRV | GATATC | 1 cut(s) | 163 |
| FaiI | YATR | 2 cut(s) | 109, 212 |
| Fnu4HI | GCNGC | 1 cut(s) | 120 |
| Fsp4HI | GCNGC | 1 cut(s) | 120 |
| FspBI | CTAG | 3 cut(s) | 45, 69, 177 |
| GluI | GCNGC | 1 cut(s) | 120 |
| GsuI | CTGGAG | 1 cut(s) | 120 |
| Hpy166II | GTNNAC | 1 cut(s) | 134 |
| Hpy188I | TCNGA | 2 cut(s) | 141, 227 |
| Hpy188III | TCNNGA | 1 cut(s) | 99 |
| Hpy8I | GTNNAC | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 208 |
| HpyCH4V | TGCA | 2 cut(s) | 10, 122 |
| HpyF3I | CTNAG | 1 cut(s) | 140 |
| Kzo9I | GATC | 1 cut(s) | 193 |
| LpnPI | CCDG | 3 cut(s) | 76, 84, 204 |
| Lsp1109I | GCAGC | 1 cut(s) | 106 |
| LweI | GCATC | 1 cut(s) | 139 |
| MaeI | CTAG | 3 cut(s) | 45, 69, 177 |
| MalI | GATC | 1 cut(s) | 195 |
| MboI | GATC | 1 cut(s) | 193 |
| MluCI | AATT | 3 cut(s) | 77, 127, 214 |
| MnlI | CCTC | 2 cut(s) | 95, 147 |
| MseI | TTAA | 2 cut(s) | 87, 170 |
| NdeII | GATC | 1 cut(s) | 193 |
| NspV | TTCGAA | 1 cut(s) | 33 |
| PkrI | GCNGC | 1 cut(s) | 121 |
| PsiI | TTATAA | 1 cut(s) | 212 |
| RsaI | GTAC | 1 cut(s) | 43 |
| RsaNI | GTAC | 1 cut(s) | 42 |
| SaqAI | TTAA | 2 cut(s) | 87, 170 |
| SatI | GCNGC | 1 cut(s) | 120 |
| Sau3AI | GATC | 1 cut(s) | 193 |
| SetI | ASST | 2 cut(s) | 70, 139 |
| SfaNI | GCATC | 1 cut(s) | 139 |
| SfuI | TTCGAA | 1 cut(s) | 33 |
| SgeI | CNNG | 9 cut(s) | 57, 81, 103, 111, 158, 165, 178, 189, 203 |
| Sse9I | AATT | 3 cut(s) | 77, 127, 214 |
| SspMI | CTAG | 3 cut(s) | 45, 69, 177 |
| TaqI | TCGA | 2 cut(s) | 33, 154 |
| TasI | AATT | 3 cut(s) | 77, 127, 214 |
| TatI | WGTACW | 1 cut(s) | 41 |
| Tru1I | TTAA | 2 cut(s) | 87, 170 |
| Tru9I | TTAA | 2 cut(s) | 87, 170 |
| TseI | GCWGC | 1 cut(s) | 119 |
| XapI | RAATTY | 1 cut(s) | 77 |
| XspI | CTAG | 3 cut(s) | 45, 69, 177 |