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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD05G1232900.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0336021 RchiOBHm_Chr5g0067541 |
| rosa_multiflora | Rmu_sc0000312.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00153200 Rroxscaffold_4G00289060 Rroxscaffold_6G00420680 |
| rosa_rugosa | Rorug01G0072300 Rorug02G0054200 Rorug07G0150000 |
| rosa_samantha | Rh1AG006200 Rh2CG362300 Rh4AG348700 Rh4DG351200 Rh6DG149000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 55 |
| AciI | CCGC | 1 cut(s) | 53 |
| AclWI | GGATC | 3 cut(s) | 59, 72, 80 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 185 |
| AflIII | ACRYGT | 1 cut(s) | 79 |
| AluBI | AGCT | 2 cut(s) | 122, 254 |
| AluI | AGCT | 2 cut(s) | 122, 254 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AlwI | GGATC | 3 cut(s) | 59, 72, 80 |
| ApeKI | GCWGC | 1 cut(s) | 122 |
| BamHI | GGATCC | 1 cut(s) | 64 |
| BauI | CACGAG | 1 cut(s) | 151 |
| BbvI | GCAGC | 1 cut(s) | 109 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 132, 166 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BfaI | CTAG | 1 cut(s) | 311 |
| BisI | GCNGC | 1 cut(s) | 123 |
| BlsI | GCNGC | 1 cut(s) | 124 |
| BmiI | GGNNCC | 1 cut(s) | 66 |
| BpuEI | CTTGAG | 1 cut(s) | 24 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 185 |
| Bse1I | ACTGG | 1 cut(s) | 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 86 |
| BseNI | ACTGG | 1 cut(s) | 232 |
| BseXI | GCAGC | 1 cut(s) | 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| Bsp143I | GATC | 2 cut(s) | 64, 85 |
| BspACI | CCGC | 1 cut(s) | 53 |
| BspCNI | CTCAG | 1 cut(s) | 85 |
| BspHI | TCATGA | 1 cut(s) | 320 |
| BspLI | GGNNCC | 1 cut(s) | 66 |
| BspPI | GGATC | 3 cut(s) | 59, 72, 80 |
| BsrBI | CCGCTC | 1 cut(s) | 55 |
| BsrI | ACTGG | 1 cut(s) | 232 |
| BssMI | GATC | 2 cut(s) | 64, 85 |
| BssSI | CACGAG | 1 cut(s) | 151 |
| Bst2BI | CACGAG | 1 cut(s) | 151 |
| Bst4CI | ACNGT | 1 cut(s) | 215 |
| BstDEI | CTNAG | 1 cut(s) | 72 |
| BstKTI | GATC | 2 cut(s) | 67, 88 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMBI | GATC | 2 cut(s) | 64, 85 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 260 |
| BstNSI | RCATGY | 2 cut(s) | 83, 110 |
| BstV1I | GCAGC | 1 cut(s) | 109 |
| BstX2I | RGATCY | 2 cut(s) | 64, 85 |
| BstYI | RGATCY | 2 cut(s) | 64, 85 |
| BtsIMutI | CAGTG | 3 cut(s) | 211, 225, 237 |
| CciI | TCATGA | 1 cut(s) | 320 |
| CviAII | CATG | 3 cut(s) | 80, 107, 321 |
| CviJI | RGCY | 4 cut(s) | 122, 133, 202, 254 |
| CviKI_1 | RGCY | 4 cut(s) | 122, 133, 202, 254 |
| DdeI | CTNAG | 1 cut(s) | 72 |
| DpnI | GATC | 2 cut(s) | 66, 87 |
| DpnII | GATC | 2 cut(s) | 64, 85 |
| FaeI | CATG | 3 cut(s) | 83, 110, 324 |
| FatI | CATG | 3 cut(s) | 79, 106, 320 |
| FauNDI | CATATG | 1 cut(s) | 145 |
| Fnu4HI | GCNGC | 1 cut(s) | 123 |
| Fsp4HI | GCNGC | 1 cut(s) | 123 |
| FspBI | CTAG | 1 cut(s) | 311 |
| GluI | GCNGC | 1 cut(s) | 123 |
| Hin1II | CATG | 3 cut(s) | 83, 110, 324 |
| Hpy166II | GTNNAC | 1 cut(s) | 156 |
| Hpy188I | TCNGA | 1 cut(s) | 99 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 321 |
| Hpy8I | GTNNAC | 1 cut(s) | 156 |
| HpyAV | CCTTC | 1 cut(s) | 78 |
| HpyCH4III | ACNGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 2 cut(s) | 125, 237 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 260 |
| HpyF3I | CTNAG | 1 cut(s) | 72 |
| Hsp92II | CATG | 3 cut(s) | 83, 110, 324 |
| Kzo9I | GATC | 2 cut(s) | 64, 85 |
| LpnPI | CCDG | 3 cut(s) | 132, 147, 213 |
| Lsp1109I | GCAGC | 1 cut(s) | 109 |
| MaeI | CTAG | 1 cut(s) | 311 |
| MaeIII | GTNAC | 1 cut(s) | 275 |
| MalI | GATC | 2 cut(s) | 66, 87 |
| MbiI | CCGCTC | 1 cut(s) | 55 |
| MboI | GATC | 2 cut(s) | 64, 85 |
| MflI | RGATCY | 2 cut(s) | 64, 85 |
| MluCI | AATT | 2 cut(s) | 283, 304 |
| MnlI | CCTC | 2 cut(s) | 105, 122 |
| MseI | TTAA | 1 cut(s) | 197 |
| MslI | CAYNNNNRTG | 1 cut(s) | 319 |
| MspA1I | CMGCKG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 260 |
| NdeI | CATATG | 1 cut(s) | 145 |
| NdeII | GATC | 2 cut(s) | 64, 85 |
| NlaIII | CATG | 3 cut(s) | 83, 110, 324 |
| NlaIV | GGNNCC | 1 cut(s) | 66 |
| NspI | RCATGY | 2 cut(s) | 83, 110 |
| PagI | TCATGA | 1 cut(s) | 320 |
| PciI | ACATGT | 1 cut(s) | 79 |
| PkrI | GCNGC | 1 cut(s) | 124 |
| PscI | ACATGT | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 1 cut(s) | 66 |
| PsuI | RGATCY | 2 cut(s) | 64, 85 |
| PvuII | CAGCTG | 1 cut(s) | 122 |
| RseI | CAYNNNNRTG | 1 cut(s) | 319 |
| SaqAI | TTAA | 1 cut(s) | 197 |
| SatI | GCNGC | 1 cut(s) | 123 |
| Sau3AI | GATC | 2 cut(s) | 64, 85 |
| SetI | ASST | 4 cut(s) | 97, 124, 256, 293 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 319 |
| SmlI | CTYRAG | 1 cut(s) | 39 |
| SmoI | CTYRAG | 1 cut(s) | 39 |
| Sse9I | AATT | 2 cut(s) | 283, 304 |
| SsiI | CCGC | 1 cut(s) | 53 |
| SspMI | CTAG | 1 cut(s) | 311 |
| TaaI | ACNGT | 1 cut(s) | 215 |
| TasI | AATT | 2 cut(s) | 283, 304 |
| Tru1I | TTAA | 1 cut(s) | 197 |
| Tru9I | TTAA | 1 cut(s) | 197 |
| TscAI | CASTG | 3 cut(s) | 218, 232, 244 |
| TseI | GCWGC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 2 cut(s) | 20, 127 |
| TspRI | CASTG | 3 cut(s) | 218, 232, 244 |
| XceI | RCATGY | 2 cut(s) | 83, 110 |
| XspI | CTAG | 1 cut(s) | 311 |