Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0016414

Physical Location & Seq

Genomic Coordinates Forward (+)

11921103 .. 11925658

Gene Structure 4556 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0150000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGACAATAGGTCTCAGAACCTGGGTTTTGCTGCTAATTACTCCTCAAATATTTTCAAGATCTTGGGCAATTCAGTGCCAGTTTGCAGATCTGGAGGTGACTATTGCACAGATACCATCTTACGGCTCAATTCCCCTGGTTCTTCGATCAGTTACATGTCAAGCCCTAAAGGAACCAAACGGAAGTGGAGTGTGATTGATGGATCCTTGAACCAACATGTTCGCTCTTCACTGTCTCTTGGGCTTGGCCATTCACCAAGTTCTTCAGACAGCAAGGGGAGTTCAGCAACTGTTTGCACTACAATGTCTTCGGCCAAAGAAACCGATGAGGAGTCCTCAATGGATCTTGAACTGGACTTTTCTTTGCATCTTGGAAATGAAATGGTACCTAGCCTGAAGAAACCTGCTACTTCAAACCTGGCCGCACCAGACCTCCAGCCTAAGGTTGACTTGGAGTTAAGTCTCTCAACTGTGCTCTCTGAATCTGCAATCACTTCTGTGGATCGTAGTTCTACTTCTGTTCTTTCAGGCATGGAGATGCCACCAGCGATTGGCGGGGCCCAAAATGCAGATGAAGTATCAACTTCATGCCACTGGAAGTCAGGGGTTGCCGTTAAGCCATTCCAGACTTCACTGAACCCAGGGGCTCATTTCCTTTTCAAACCAGTTCCAAATAAACTTGATTCCATTCCTACTGTTCCAGACATCTCATCAAGCATATTGACCACACCAAATAGCTCAGTCACATGTACTTCTGCGATCACACACAGACAACAGCCACATCATCGCAGCTCCAATTCAAAGACGTGTCAGGTTGAGGGATGTGGAAAGGGTGCCAGAGGTGCTTCGGGCCGCTGCATATCTCATGGTGGTGGTAGGAGGTGTCAGAGAGCTGGCTGCCACAAGGGTGCTGAGGGCCGCACAGTGTATTGTAAGGCTCATGGTGGTGGCCGGCGATGTGAATTCCTGGGGTGCACCAAGAGTGCAGAAGGACGCACGGATTTTTGTATTGCCCATGGTGGTGGTCGGAGATGCAGTCATGATGGTTGCACAAGAGCTGCCAGAGGCAAATCAGGATTGTGCATCCGTCACGGTGGCGGCAAGAGATGTCAAAGAGAAAATTGCACCAAAAGTGCCGAGGGACTCTCAGGCCTTTGCATCTCACATGGAGGTGGTCGCAGATGCCAGGCTATAGGATGCACAAAAGGGGCACAAGGGAGCACAATGTTCTGCAAGGCTCATGGTGGAGGGAAACGATGCACTGCTCCAGGTTGCACCAAGGGAGCGGAAGGGAGCACACCCTATTGCAAGGGCCATGGGGGAGGGAAGAGGTGTGCATTCCAAGGTGGTGGGCATTGTACAAAGAGTGTGCATGGAGGTACCAATTTCTGTGTGGCACATGGGGGTGGCAAGCGATGTGCCATGCCTGAGTGTACAAAGAGTGCAAGGGGACGGACTGACTACTGTGTCCGACATGGTGGAGGCAAAAGATGCAAGTTTGAAGGGTGTGGCAAGAGTGCACAAGGCAGTACTGACTTCTGCAAGGCACATGGTGGAGGAAAGAGATGCTCTTGGGGCCATCCTGGGTCTGTTTATGGGCGCCAAGCTGTGGGTCCTTGCAACTCATTTGCAAGGGGGAAGACAGGTCTTTGTGCACTCCATAGTGGTCTGGTTCAGGATAAGAGGGTCCATGGAGGTGTTACCCTGGGGCCTATAGTTCAGGAACCTAAACTTGGAAAGTTGGAAAAGGTGAAAGAAGTTGATGAAATGAATGTTGATGAAGCCATGACTATTGGGAGCATAGCTACTACAGTAAGCAGAAGCTGCTCTGATCTGAAGCATGGTGCTAACTCCGTTGGTCAACCTTCAGTCATTGTTCCAGAAGGCCGTGTCCATGGGGGAAGTCTGATGGCGCTGCTTGCAGGTGGTTCAGATACTGCCAACACAAACATCATGGGAAGTGATTCATCTGTGCCAGTGAAGTCTTACTTGATGCCCAAGAACTGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase_Tyr

Protein Analysis

670

Amino Acids

69.64

Weight (kDa)

9.28

Isoelectric Point (pI)

45.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Zf_WRKY19	PF24906	317 - 341	1.1e-09	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	342 - 366	1.2e-08	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	367 - 391	3.3e-10	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	392 - 416	2.6e-07	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	417 - 441	4.7e-06	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	470 - 494	3.6e-10	WRKY19 zinc finger domain
Zf_WRKY19	PF24906	495 - 519	6e-08	WRKY19 zinc finger domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016414)

Species	Orthologous Gene IDs
malus_domestica	MD05G1232900.v1.1
rosa_chinensis	RchiOBHm_Chr1g0336021 RchiOBHm_Chr5g0067541
rosa_multiflora	Rmu_sc0000312.1_g000019
rosa_roxburghii	Rroxscaffold_2G00153200 Rroxscaffold_4G00289060 Rroxscaffold_6G00420680
rosa_rugosa	Rorug01G0072300 Rorug02G0054200 Rorug07G0150000
rosa_samantha	Rh1AG006200 Rh2CG362300 Rh4AG348700 Rh4DG351200 Rh6DG149000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1913
AasI	GACNNNNNNGTC	1 cut(s)	1466
Acc36I	ACCTGC	2 cut(s)	412, 1913
Acc65I	GGTACC	2 cut(s)	385, 1379
AccB1I	GGYRCC	4 cut(s)	385, 833, 1379, 1599
AccB7I	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
AccBSI	CCGCTC	1 cut(s)	1286
AciI	CCGC	6 cut(s)	423, 555, 853, 919, 1098, 1286
AclWI	GGATC	4 cut(s)	198, 211, 351, 510
AcoI	YGGCCR	4 cut(s)	247, 312, 420, 949
AcsI	RAATTY	1 cut(s)	962
AcuI	CTGAAG	4 cut(s)	249, 416, 1851, 1856
AcyI	GRCGYC	1 cut(s)	1600
AdeI	CACNNNGTG	1 cut(s)	1553
AfaI	GTAC	6 cut(s)	387, 751, 1360, 1381, 1435, 1531
AfiI	CCNNNNNNNGG	6 cut(s)	123, 442, 551, 1609, 1733, 2004
AflIII	ACRYGT	4 cut(s)	156, 217, 746, 806
AgsI	TTSAA	7 cut(s)	58, 211, 350, 414, 661, 801, 1502
AhdI	GACNNNNNGTC	1 cut(s)	10
AjiI	CACGTC	1 cut(s)	807
AjnI	CCWGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
AleI	CACNNNNGTG	2 cut(s)	497, 906
AluBI	AGCT	7 cut(s)	738, 792, 893, 1058, 1607, 1805, 1824
AluI	AGCT	7 cut(s)	738, 792, 893, 1058, 1607, 1805, 1824
Alw21I	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
Alw26I	GTCTC	3 cut(s)	18, 240, 467
Alw44I	GTGCAC	3 cut(s)	973, 1518, 1653
AlwI	GGATC	4 cut(s)	198, 211, 351, 510
AlwNI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
ApaI	GGGCCC	1 cut(s)	562
ApaLI	GTGCAC	3 cut(s)	973, 1518, 1653
ApeKI	GCWGC	7 cut(s)	32, 789, 855, 897, 1058, 1824, 1915
ApoI	RAATTY	1 cut(s)	962
Asp700I	GAANNNNTTC	1 cut(s)	1963
Asp718I	GGTACC	2 cut(s)	385, 1379
AspLEI	GCGC	2 cut(s)	1602, 1915
AspS9I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
AsuHPI	GGTGA	3 cut(s)	110, 246, 1762
AvaII	GGWCC	2 cut(s)	1613, 1687
AxyI	CCTNAGG	1 cut(s)	441
BaeGI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BalI	TGGCCA	1 cut(s)	249
BamHI	GGATCC	1 cut(s)	203
BanI	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BanII	GRGCYC	2 cut(s)	562, 649
BarI	GAAGNNNNNNTAC	2 cut(s)	499, 531
BbsI	GAAGAC	2 cut(s)	300, 1646
Bbv12I	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
BbvCI	CCTCAGC	1 cut(s)	912
BbvI	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BccI	CCATC	5 cut(s)	125, 194, 1037, 1587, 1903
BceAI	ACGGC	3 cut(s)	140, 596, 1872
BciT130I	CCWGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
BcoDI	GTCTC	3 cut(s)	18, 240, 467
BfaI	CTAG	1 cut(s)	390
BfmI	CTRYAG	3 cut(s)	1191, 1713, 1809
BfoI	RGCGCY	2 cut(s)	1603, 1916
BfuAI	ACCTGC	2 cut(s)	412, 1913
BglII	AGATCT	2 cut(s)	60, 89
BmcAI	AGTACT	1 cut(s)	1531
Bme1390I	CCNGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
Bme18I	GGWCC	2 cut(s)	1613, 1687
BmeRI	GACNNNNNGTC	1 cut(s)	10
BmgBI	CACGTC	1 cut(s)	807
BmgT120I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
BmrFI	CCNGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
BpiI	GAAGAC	2 cut(s)	300, 1646
BplI	GAGNNNNNCTC	4 cut(s)	320, 352, 1130, 1162
BpmI	CTGGAG	3 cut(s)	114, 419, 1251
Bpu10I	CCTNAGC	1 cut(s)	912
BsaHI	GRCGYC	1 cut(s)	1600
BsaI	GGTCTC	1 cut(s)	18
BsaXI	ACNNNNNCTCC	4 cut(s)	417, 447, 1021, 1051
Bsc4I	CCNNNNNNNGG	6 cut(s)	123, 442, 551, 1609, 1733, 2004
Bse118I	RCCGGY	1 cut(s)	951
Bse1I	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
Bse21I	CCTNAGG	1 cut(s)	441
BseBI	CCWGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
BseGI	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BseLI	CCNNNNNNNGG	6 cut(s)	123, 442, 551, 1609, 1733, 2004
BseMII	CTCAG	5 cut(s)	29, 753, 903, 1161, 1419
BseNI	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
BseRI	GAGGAG	2 cut(s)	34, 344
BseSI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BseXI	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BsgI	GTGCAG	1 cut(s)	1005
BshNI	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BsiHKAI	GWGCWC	6 cut(s)	477, 977, 1223, 1298, 1522, 1657
BsiSI	CCGG	1 cut(s)	952
BslFI	GGGAC	2 cut(s)	1155, 1464
BslI	CCNNNNNNNGG	6 cut(s)	123, 442, 551, 1609, 1733, 2004
BsmAI	GTCTC	3 cut(s)	18, 240, 467
BsmFI	GGGAC	2 cut(s)	1155, 1464
BsmI	GAATGC	1 cut(s)	1337
Bso31I	GGTCTC	1 cut(s)	18
Bsp120I	GGGCCC	1 cut(s)	558
Bsp1286I	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
Bsp1407I	TGTACA	2 cut(s)	1358, 1433
Bsp143I	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
Bsp19I	CCATGG	4 cut(s)	1015, 1315, 1690, 1894
BspACI	CCGC	6 cut(s)	423, 555, 853, 919, 1098, 1286
BspCNI	CTCAG	5 cut(s)	28, 752, 904, 1160, 1420
BspHI	TCATGA	1 cut(s)	1039
BspMI	ACCTGC	2 cut(s)	412, 1913
BspPI	GGATC	4 cut(s)	198, 211, 351, 510
BspQI	GCTCTTC	1 cut(s)	232
BspT107I	GGYRCC	4 cut(s)	385, 833, 1379, 1599
BspTNI	GGTCTC	1 cut(s)	18
BsrBI	CCGCTC	1 cut(s)	1286
BsrFI	RCCGGY	1 cut(s)	951
BsrGI	TGTACA	2 cut(s)	1358, 1433
BsrI	ACTGG	6 cut(s)	80, 357, 599, 665, 1976, 2009
BssAI	RCCGGY	1 cut(s)	951
BssMI	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
BssNI	GRCGYC	1 cut(s)	1600
BssT1I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
Bst2UI	CCWGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
Bst4CI	ACNGT	8 cut(s)	234, 292, 472, 697, 925, 1094, 1466, 1813
Bst6I	CTCTTC	2 cut(s)	232, 1322
BstACI	GRCGYC	1 cut(s)	1600
BstAPI	GCANNNNNTGC	2 cut(s)	1491, 1824
BstAUI	TGTACA	2 cut(s)	1358, 1433
BstC8I	GCNNGC	4 cut(s)	895, 953, 1412, 1920
BstDEI	CTNAG	6 cut(s)	15, 441, 739, 912, 1147, 1428
BstDSI	CCRYGG	4 cut(s)	1015, 1315, 1690, 1894
BstF5I	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BstH2I	RGCGCY	2 cut(s)	1603, 1916
BstHHI	GCGC	2 cut(s)	1602, 1915
BstKTI	GATC	8 cut(s)	63, 92, 150, 206, 346, 505, 762, 1834
BstMAI	GTCTC	3 cut(s)	18, 240, 467
BstMBI	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
BstMWI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
BstNI	CCWGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
BstNSI	RCATGY	3 cut(s)	160, 221, 750
BstSCI	CCNGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
BstSFI	CTRYAG	3 cut(s)	1191, 1713, 1809
BstSLI	GKGCMC	5 cut(s)	562, 977, 1213, 1522, 1657
BstV1I	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
BstV2I	GAAGAC	2 cut(s)	300, 1646
BstX2I	RGATCY	4 cut(s)	60, 89, 203, 343
BstXI	CCANNNNNNTGG	2 cut(s)	1022, 1349
BstYI	RGATCY	4 cut(s)	60, 89, 203, 343
Bsu36I	CCTNAGG	1 cut(s)	441
BtgI	CCRYGG	4 cut(s)	1015, 1315, 1690, 1894
BtgZI	GCGATG	3 cut(s)	770, 970, 1429
BtrI	CACGTC	1 cut(s)	807
BtsCI	GGATG	5 cut(s)	827, 1083, 1202, 1579, 2013
BtsI	GCAGTG	1 cut(s)	1260
BtsIMutI	CAGTG	7 cut(s)	81, 230, 592, 632, 930, 1260, 1983
BveI	ACCTGC	2 cut(s)	412, 1913
Cac8I	GCNNGC	4 cut(s)	895, 953, 1412, 1920
CaiI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
CciI	TCATGA	1 cut(s)	1039
CfoI	GCGC	2 cut(s)	1602, 1915
Cfr10I	RCCGGY	1 cut(s)	951
Cfr13I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
CseI	GACGC	1 cut(s)	1002
Csp6I	GTAC	6 cut(s)	386, 750, 1359, 1380, 1434, 1530
CviQI	GTAC	6 cut(s)	386, 750, 1359, 1380, 1434, 1530
DdeI	CTNAG	6 cut(s)	15, 441, 739, 912, 1147, 1428
DinI	GGCGCC	1 cut(s)	1601
DpnI	GATC	8 cut(s)	62, 91, 149, 205, 345, 504, 761, 1833
DpnII	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
DraIII	CACNNNGTG	1 cut(s)	1553
DrdI	GACNNNNNNGTC	1 cut(s)	1466
DriI	GACNNNNNGTC	1 cut(s)	10
DseDI	GACNNNNNNGTC	1 cut(s)	1466
EaeI	YGGCCR	4 cut(s)	247, 312, 420, 949
Eam1104I	CTCTTC	2 cut(s)	232, 1322
Eam1105I	GACNNNNNGTC	1 cut(s)	10
EarI	CTCTTC	2 cut(s)	232, 1322
Eco130I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
Eco147I	AGGCCT	1 cut(s)	1152
Eco24I	GRGCYC	2 cut(s)	562, 649
Eco31I	GGTCTC	1 cut(s)	18
Eco47I	GGWCC	2 cut(s)	1613, 1687
Eco57I	CTGAAG	4 cut(s)	249, 416, 1851, 1856
Eco81I	CCTNAGG	1 cut(s)	441
EcoO109I	RGGNCCY	3 cut(s)	558, 1613, 1709
EcoRI	GAATTC	1 cut(s)	962
EcoRII	CCWGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
EcoT14I	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
EcoT38I	GRGCYC	2 cut(s)	562, 649
EgeI	GGCGCC	1 cut(s)	1601
EheI	GGCGCC	1 cut(s)	1601
ErhI	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
FalI	AAGNNNNNCTT	4 cut(s)	434, 466, 1973, 2005
FaqI	GGGAC	2 cut(s)	1155, 1464
FauI	CCCGC	1 cut(s)	548
FokI	GGATG	4 cut(s)	834, 1070, 1209, 1566
FriOI	GRGCYC	2 cut(s)	562, 649
FspBI	CTAG	1 cut(s)	390
GlaI	GCGC	2 cut(s)	1601, 1914
GsuI	CTGGAG	3 cut(s)	114, 419, 1251
HaeII	RGCGCY	2 cut(s)	1603, 1916
HapII	CCGG	1 cut(s)	952
HgaI	GACGC	1 cut(s)	1002
HhaI	GCGC	2 cut(s)	1602, 1915
Hin1I	GRCGYC	1 cut(s)	1600
Hin6I	GCGC	2 cut(s)	1600, 1913
HinP1I	GCGC	2 cut(s)	1600, 1913
HincII	GTYRAC	2 cut(s)	448, 1862
HindII	GTYRAC	2 cut(s)	448, 1862
HinfI	GANTC	5 cut(s)	332, 482, 683, 1143, 1964
HpaII	CCGG	1 cut(s)	952
HphI	GGTGA	3 cut(s)	110, 246, 1762
Hpy166II	GTNNAC	6 cut(s)	448, 975, 1434, 1520, 1655, 1862
Hpy8I	GTNNAC	6 cut(s)	448, 975, 1434, 1520, 1655, 1862
HpyAV	CCTTC	5 cut(s)	983, 1283, 1496, 1875, 1877
HpyCH4III	ACNGT	8 cut(s)	234, 292, 472, 697, 925, 1094, 1466, 1813
HpyCH4IV	ACGT	1 cut(s)	806
HpyF10VI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
HpyF3I	CTNAG	6 cut(s)	15, 441, 739, 912, 1147, 1428
HpySE526I	ACGT	1 cut(s)	806
Hsp92I	GRCGYC	1 cut(s)	1600
HspAI	GCGC	2 cut(s)	1600, 1913
KasI	GGCGCC	1 cut(s)	1599
KpnI	GGTACC	2 cut(s)	389, 1383
KroI	GCCGGC	1 cut(s)	951
KroNI	GCCGGC	1 cut(s)	953
Kzo9I	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
LguI	GCTCTTC	1 cut(s)	232
LmnI	GCTCC	6 cut(s)	797, 1218, 1270, 1283, 1293, 1797
Lsp1109I	GCAGC	7 cut(s)	19, 801, 842, 884, 1045, 1811, 1902
MaeI	CTAG	1 cut(s)	390
MaeII	ACGT	1 cut(s)	806
MaeIII	GTNAC	5 cut(s)	98, 152, 742, 1088, 1699
MalI	GATC	8 cut(s)	62, 91, 149, 205, 345, 504, 761, 1833
MbiI	CCGCTC	1 cut(s)	1286
MboI	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
MboII	GAAGA	7 cut(s)	135, 219, 255, 300, 409, 1339, 1651
MflI	RGATCY	4 cut(s)	60, 89, 203, 343
MhlI	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
MlsI	TGGCCA	1 cut(s)	249
MluCI	AATT	7 cut(s)	37, 70, 130, 796, 962, 1120, 1384
MluNI	TGGCCA	1 cut(s)	249
Mly113I	GGCGCC	1 cut(s)	1600
MlyI	GAGTC	2 cut(s)	341, 1137
MmeI	TCCRAC	3 cut(s)	1007, 1495, 1722
Mox20I	TGGCCA	1 cut(s)	249
MroNI	GCCGGC	1 cut(s)	951
MroXI	GAANNNNTTC	1 cut(s)	1963
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	2 cut(s)	458, 615
Msp20I	TGGCCA	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	855
MspI	CCGG	1 cut(s)	952
MspR9I	CCNGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
Mva1269I	GAATGC	1 cut(s)	1337
MvaI	CCWGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
MwoI	GCNNNNNNNGC	6 cut(s)	566, 842, 1491, 1575, 1824, 1919
NaeI	GCCGGC	1 cut(s)	953
NarI	GGCGCC	1 cut(s)	1600
NcoI	CCATGG	4 cut(s)	1015, 1315, 1690, 1894
NdeII	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
NgoMIV	GCCGGC	1 cut(s)	951
NmeAIII	GCCGAG	1 cut(s)	1162
NmuCI	GTSAC	3 cut(s)	98, 742, 1088
NspI	RCATGY	3 cut(s)	160, 221, 750
OliI	CACNNNNGTG	2 cut(s)	497, 906
PagI	TCATGA	1 cut(s)	1039
PaqCI	CACCTGC	1 cut(s)	1913
PasI	CCCWGGG	2 cut(s)	641, 1705
PceI	AGGCCT	1 cut(s)	1152
PciI	ACATGT	3 cut(s)	156, 217, 746
PciSI	GCTCTTC	1 cut(s)	232
PctI	GAATGC	1 cut(s)	1337
PdiI	GCCGGC	1 cut(s)	953
PdmI	GAANNNNTTC	1 cut(s)	1963
PfeI	GAWTC	3 cut(s)	482, 683, 1964
PflMI	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
PleI	GAGTC	2 cut(s)	340, 1137
PluTI	GGCGCC	1 cut(s)	1603
PpsI	GAGTC	2 cut(s)	340, 1137
PpuMI	RGGWCCY	1 cut(s)	1613
PscI	ACATGT	3 cut(s)	156, 217, 746
Psp5II	RGGWCCY	1 cut(s)	1613
Psp6I	CCWGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
PspGI	CCWGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
PspOMI	GGGCCC	1 cut(s)	558
PspPI	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
PspPPI	RGGWCCY	1 cut(s)	1613
PstNI	CAGNNNCTG	4 cut(s)	22, 290, 1824, 1937
PsuI	RGATCY	4 cut(s)	60, 89, 203, 343
RsaI	GTAC	6 cut(s)	387, 751, 1360, 1381, 1435, 1531
RsaNI	GTAC	6 cut(s)	386, 750, 1359, 1380, 1434, 1530
SapI	GCTCTTC	1 cut(s)	232
SaqAI	TTAA	2 cut(s)	458, 615
Sau3AI	GATC	8 cut(s)	60, 89, 147, 203, 343, 502, 759, 1831
Sau96I	GGNCC	9 cut(s)	558, 559, 850, 916, 1312, 1576, 1613, 1687, 1709
ScaI	AGTACT	1 cut(s)	1531
SchI	GAGTC	2 cut(s)	341, 1137
ScrFI	CCNGG	9 cut(s)	23, 138, 419, 642, 968, 1187, 1269, 1584, 1706
SduI	GDGCHC	9 cut(s)	477, 562, 649, 977, 1213, 1223, 1298, 1522, 1657
SfcI	CTRYAG	3 cut(s)	1191, 1713, 1809
SfoI	GGCGCC	1 cut(s)	1601
SinI	GGWCC	2 cut(s)	1613, 1687
Sse9I	AATT	7 cut(s)	37, 70, 130, 796, 962, 1120, 1384
SseBI	AGGCCT	1 cut(s)	1152
SsiI	CCGC	6 cut(s)	423, 555, 853, 919, 1098, 1286
SspDI	GGCGCC	1 cut(s)	1599
SspI	AATATT	1 cut(s)	52
SspMI	CTAG	1 cut(s)	390
StuI	AGGCCT	1 cut(s)	1152
StyD4I	CCNGG	9 cut(s)	21, 136, 417, 640, 966, 1185, 1267, 1582, 1704
StyI	CCWWGG	6 cut(s)	1015, 1278, 1315, 1342, 1690, 1894
TaaI	ACNGT	8 cut(s)	234, 292, 472, 697, 925, 1094, 1466, 1813
TaiI	ACGT	1 cut(s)	809
TaqI	TCGA	1 cut(s)	146
TasI	AATT	7 cut(s)	37, 70, 130, 796, 962, 1120, 1384
TatI	WGTACW	4 cut(s)	749, 1358, 1433, 1529
TauI	GCSGC	4 cut(s)	425, 855, 921, 1101
TfiI	GAWTC	3 cut(s)	482, 683, 1964
Tru1I	TTAA	2 cut(s)	458, 615
Tru9I	TTAA	2 cut(s)	458, 615
TscAI	CASTG	7 cut(s)	81, 237, 599, 639, 930, 1267, 1983
TseFI	GTSAC	3 cut(s)	98, 742, 1088
TseI	GCWGC	7 cut(s)	32, 789, 855, 897, 1058, 1824, 1915
Tsp45I	GTSAC	3 cut(s)	98, 742, 1088
TspDTI	ATGAA	7 cut(s)	393, 576, 588, 1779, 1784, 1794, 1956
TspGWI	ACGGA	5 cut(s)	196, 1013, 1076, 1468, 1843
TspRI	CASTG	7 cut(s)	81, 237, 599, 639, 930, 1267, 1983
Van91I	CCANNNNNTGG	3 cut(s)	551, 1609, 2004
VneI	GTGCAC	3 cut(s)	973, 1518, 1653
VpaK11BI	GGWCC	2 cut(s)	1613, 1687
XapI	RAATTY	1 cut(s)	962
XceI	RCATGY	3 cut(s)	160, 221, 750
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1390
XmnI	GAANNNNTTC	1 cut(s)	1963
XspI	CTAG	1 cut(s)	390
ZrmI	AGTACT	1 cut(s)	1531

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.