RchiOBHm_Chr1g0356701

Bulb-type mannose-specific lectin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011114
Physical Location & Seq
Reverse (-)
49109089 .. 49116522
7434 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58202

Sequence Viewer

Length: 3858 bp
ATGCCTTCTTCCATGGTTCGCATCTCTCTCCTCCTCCCCATACTCCAAACCCTGATTCTCATCTCCACAAACTCCAATCCCATTCCCAAAACTACTTCACCCCAAAGCCCAACCCAGTTCTCCAACACCCTTCCATATCCCACTCCAAACTCAAACGGGTCTTCAAGAACTGTCTCGAAGATTCTCTGGTACGCACCCTTGAGAACCAACAAGGTTATAGTCGATGGCAACTCCACCATTTGCAGTCGCAACAGGACCTTTCAGCTCGGCTTCTTCCCCTTTAATGGCGGCGCCTACTTGGCAATAATGTACTCCTCAATTCAGGTCCCCACCGTAGTCTGGGTCGCCAACCGCGACCGCCCCGTCAAGAATCTCACTTCAGCCAGACTCGAAATCACAGCCACCGACGGCCGGCTCGTCGTTATAGACTCCGATAACTCGACTCTCTGGGCCAGCCAGAGCACCGCCGCCGCCTCCGCCGTCGGCGCCCAAGTCGTGCTCTTGGAGAGCGGCAATCTGGTGCTGCTCACCCGCTCCGGGGAACTCGCGTGGCAGAGCTTCGATCACCCGGCTGACACGTGGCTCCCCGGCATGAATCTGACGGCGGAGCGGGGCCTGACCAGCTGGCGGAGCGCGGAGGACCCGTCCCCGGGTTTGTATTCGCTGCGGTTGCGCCCGCAGGATTACGGTGAGTTTGAGCTCGTTTTTAACGGTAGTGTTGAGTACTGGAGGACCGGGGTTTGGGACGGTAAGGCTTTCGCTGATGTGCCGGAGATGACTGTTAAGTATATCTATATGTTTCACTTCGTAGACCCGTTCAAGCCGACGGCGTCGTTTGGGTTCACCGAGCGGCCGTTGGAGAGAGGGTTGGACCCTCCGCTGACCCGGTTCCAGATAGACCATTCGGGTCAGCTCCGGCAGTATACTTGGGGTTTAAGCGAGACCTGGGACAAGTTTTGGTACCAGCCTGAGGACAAGTGCAGAGTGTTTGGTTTGTGTGGGAGGTTTGGGGTTTGTGATAGTGAGACCGCTGAACCCTGTGAGTGTCCCTCAGGGTTTAAGCCTGTGGATGAGTCTGGTTGGGACTCTGGGGACTATTCCGGTGGGTGTGAGAGGTTTGGTGATGTGCCTTGTGAGGAAAGAGATGATGGTTTCGTGGAGGTTCAGGTTGAGAGTTTGGCGGAAAGTTGGCATAATAGTTCGATTACTGGTAGGGATGGTTGTGAAAAGATGTGCTTGCAAGTTTGTTCTTGTATTGGTTTTCAGTACAACGAGAGATCTAGTTTGTGTAGACATTATTTCGGGTCTGTGTCGAATTTGAGGAATCTGAGCTCTGATGGTAATAGCAGTATGGACGCTGGTAGTGTTTTGAATTTGAAGGTACGAAAAGGTGTGATCTTGAAGAACAGGAAGGCTAAGGTTATGAATTATACAGTTTTTGGTGCTAGCATTGTTGGGTCAGTTGCGGTTTTGGGTTTTGTGGTGGTGGTTGTATTGATTAGGAGAAGAAGGATGAAGAGGAATGGAGGAGCAGAGGAAAGTGTTTTGCTGCCGGTGTTGAATTTGAAGGTATTTTCCTACAAAGAGCTTCAGACTGCAACCTGGGGTTTTAAAGAGAAACTCGGGCATGGTGGCTTTGGAGCGGTTTTCCTAGGGGAGCTATCAGACCGTACTCTTGTTGCAGTGAAACGCTTGGAGAGGCCAGGCAGCGGAGAGCAACAATTCCGAGCAGAAGTTTGCACCATTGGCAACATTCAGCATGTCAATCTTGTGAGACTCAGAGGCTTCTGCTCAGAAGATTCTCATAGACTTCTGGTATATGATTACATGCCAAATGGTCCTCTAAGTGTGTATCTACGTCGAGACGGTCCAAATTTGAGCTGGGATGTTAGGTTTCGGCTAGCGGTTGGTACGGCAAGAGGCATTGCATATTTACATGAGGGGTGTAGAGATTCCATAATCCATTGTGATATCAAACCAGAAAACATTTTGCTTGATTGTGATTACACGGCAAAGGTGTCAGATTTTGGGTTAGCAAAGCTGATTCACAGAGACTTTAGTGGAGCATTAGCTGCTGATGGTAATCATGGCTATACCTATGGCTATGTAGCGCCAGAGTGCAGACCTGGTGATCCAATCACCACAAAAGCCGATGTTTACAGCTATGGAAAGACATTGATAGAATTACTTGGAGGCCATAGAATGTGGGAGGCACCTCCATCTACAGGCGGCAGAGAGGGTGGAAATGAAATAACAGATTCTTGGTGCTTTCCTTCGTGGGCATCACAGCAGATAATTGATGGCAATGTGGTGGCTGTAATTGATGATAGACTCGGGAGCAAGTATAACCTTAAGGAGGCAGAGCGTGTTGCATTAGTGGCGGTGTGGTGCATACAGGACGACGAGGCAACAAGGCCTACAATGGGGATGGTAGTGACAATGTTGGAAGGGGTCGTGGAAGTGACTGTTCCTCCAGCACCAAAGTTGTTACAAGCGCTGGTTTCAGGGGAGTCATTCTGTGGGGTGAATTCCGATTCTGGACACAGTCCATCGATTGCCAGCGACAACTTCTCTGGTTGTAATACGAAATTATCTAGTTGCGGTTCAGAGTCGTCACTTGGTAATCTTGGGATGGCAAGTGCACTTGAAACACTGTGTGGGCAGGCATTTGGTGCTGGGCAAGTAGAAATGCTAGGAGTTTACATGCAACGATCATGGTTAATTCTGATAATCACATGCTTTGGTTTACTACCACTTTATGTGTTCGCGACGCCAATCCTAAAACTCCTTGGCCAAGAAGATGACATTGCAAACCTTGCCGGGAAGTTCTCTATCCAAACCATTCCTCAAATGTTTTCACTGGCCATCAATTTCCCAACTCAAAAGTTCTTGCAAGCACAGAGCAGGGTTTCGGTTCTGGCATGGATTGGTTTTGCAAGTCTAATTCTACACATAGGAATCCTCTATGTCTTTATCGAATTGTTCGGGTGGGGAACGAGTGGTGCTGCTGCAGCCTATAATTTCTCGGCATGGGGGATGTCATTGGCTCAAGTCTTTTATATAGTTCGTTGGTGTACAGATGGTTGGAAGGGATTGTCATGGTTAGCCTTCAAGGAATTATGGTCCTTTGCAAAACTCTCCCTTGCTTCAGCTGTAATGCTTTGCCTAGAGATTTGGTACTTCATGACCATAATTGTTCTCACCGGACACCTTGATGATCCTGTTATTGCAGTTGGCTCCCTTTCAATATGCATGAATCTGAATGGTTGGGAAGGCATGTTGTTTATTGGGATCAATGCAGCAATAAGCGTTCGAGTCTCCAATGAGCTTGGATCGGCACATCCGAGAGCTGCAAAATACTCCGTCATTATCACGATCATTGAGTCTCTAATCATTGGAATCTTTTTCGGGGGGATTATCTTGGCGGCCAAAGACCACTTTGCCATCATCTTTACTGAGAGCAAAGAGATGCAACAAGCAGTTTCTCGTTTAGCTTTCCTTCTCAGTATTACAATGATACTCAATAGTGTTCAGCCGGTTATTTCAGGTGTTGCTGTTGGAGGAGGGTGGCAAGCTTTGGTGGCTTACATAAACTTGTTTAGTTATTATATTGTTGGTCTACCTCTTGGGTTTCTTCTTGGTTACAAAACAGGGATGAGAGTGGAGGGAATTTGGATTGGTATGATATTCGGGACATCCTTGCAAACACTGATCCTCTTGTACATTGTTTACAAAACCAACTGGAACAAAGAGGTAGAACAAGCCTCGGAAAGAATGAGGCAGTGGACTGGAGATGAACTACTAGTAGTTGATAACAAAAGGAAGAGTGGACAAGAAGGTGGACCTCTAATATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin MatE Pkinase S_locus_glycop

Protein Analysis

1285

Amino Acids

141.43

Weight (kDa)

5.94

Isoelectric Point (pI)

38.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 111 - 203 2.5e-26 D-mannose binding lectin
S_locus_glycop PF00954 243 - 355 8.3e-22 S-locus glycoprotein domain
Pkinase PF00069 537 - 811 1.7e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 537 - 812 7.2e-39 Protein tyrosine and serine/threonine kinase
MatE PF01554 876 - 990 8.1e-22 MatE
MatE PF01554 1050 - 1212 2.9e-24 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 362
Acc65I GGTACC 1 cut(s) 960
AccB1I GGYRCC 4 cut(s) 290, 485, 960, 2212
AccBSI CCGCTC 5 cut(s) 510, 534, 610, 850, 1643
AccI GTMKAC 4 cut(s) 810, 923, 1291, 3619
AccII CGCG 4 cut(s) 354, 548, 635, 2768
AclWI GGATC 5 cut(s) 2126, 3212, 3299, 3340, 3706
AcoI YGGCCR 5 cut(s) 409, 851, 2791, 2862, 3426
AcsI RAATTY 6 cut(s) 1315, 1372, 1561, 1873, 2527, 3669
AcuI CTGAAG 3 cut(s) 363, 1574, 3132
AcvI CACGTG 1 cut(s) 579
AcyI GRCGYC 4 cut(s) 291, 486, 830, 2771
AdeI CACNNNGTG 1 cut(s) 2657
AfeI AGCGCT 1 cut(s) 2496
AflII CTTAAG 1 cut(s) 2351
AflIII ACRYGT 1 cut(s) 576
AhlI ACTAGT 1 cut(s) 3802
AjnI CCWGG 4 cut(s) 944, 1601, 1702, 2125
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
Alw21I GWGCWC 5 cut(s) 464, 501, 702, 1334, 2644
Alw26I GTCTC 8 cut(s) 178, 935, 1019, 1768, 1857, 2046, 3322, 3390
Alw44I GTGCAC 1 cut(s) 2640
AlwI GGATC 5 cut(s) 2126, 3212, 3299, 3340, 3706
Ama87I CYCGRG 3 cut(s) 649, 1622, 2333
Aor51HI AGCGCT 1 cut(s) 2496
ApaLI GTGCAC 1 cut(s) 2640
ApoI RAATTY 6 cut(s) 1315, 1372, 1561, 1873, 2527, 3669
Asp718I GGTACC 1 cut(s) 960
AspA2I CCTAGG 1 cut(s) 1651
AspLEI GCGC 6 cut(s) 293, 488, 635, 675, 2113, 2497
AsuC2I CCSGG 8 cut(s) 538, 569, 588, 650, 651, 736, 886, 2821
AsuNHI GCTAGC 2 cut(s) 1445, 1900
AvaI CYCGRG 3 cut(s) 649, 1622, 2333
AvaII GGWCC 9 cut(s) 255, 325, 640, 732, 871, 1838, 1868, 3123, 3842
AvrII CCTAGG 1 cut(s) 1651
AxyI CCTNAGG 2 cut(s) 969, 1051
BaeGI GKGCMC 1 cut(s) 2644
BalI TGGCCA 2 cut(s) 2793, 2864
BanI GGYRCC 4 cut(s) 290, 485, 960, 2212
BanII GRGCYC 2 cut(s) 702, 1334
BbrPI CACGTG 1 cut(s) 579
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 5 cut(s) 464, 501, 702, 1334, 2644
BceAI ACGGC 7 cut(s) 424, 464, 618, 838, 843, 1929, 2025
BciT130I CCWGG 4 cut(s) 946, 1603, 1704, 2127
BcnI CCSGG 8 cut(s) 538, 569, 588, 650, 651, 736, 886, 2821
BcoDI GTCTC 8 cut(s) 178, 935, 1019, 1768, 1857, 2046, 3322, 3390
BcuI ACTAGT 1 cut(s) 3802
BfaI CTAG 8 cut(s) 1281, 1446, 1652, 1901, 2595, 2693, 3167, 3803
BfmI CTRYAG 2 cut(s) 2223, 3009
BfoI RGCGCY 4 cut(s) 294, 489, 2114, 2498
BfrI CTTAAG 1 cut(s) 2351
BglI GCCNNNNNGGC 1 cut(s) 299
BglII AGATCT 1 cut(s) 1277
BlnI CCTAGG 1 cut(s) 1651
BmcAI AGTACT 1 cut(s) 725
Bme18I GGWCC 9 cut(s) 255, 325, 640, 732, 871, 1838, 1868, 3123, 3842
BmeT110I CYCGRG 3 cut(s) 649, 1622, 2333
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 3 cut(s) 30, 2291, 3459
BmtI GCTAGC 2 cut(s) 1449, 1904
BmuI ACTGGG 1 cut(s) 109
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 1034, 1066
BpmI CTGGAG 3 cut(s) 748, 2457, 3810
Bpu10I CCTNAGC 1 cut(s) 1416
BpuEI CTTGAG 2 cut(s) 220, 3033
BpuMI CCSGG 8 cut(s) 538, 569, 588, 650, 651, 736, 886, 2821
Bsa29I ATCGAT 1 cut(s) 2552
BsaAI YACGTR 1 cut(s) 579
BsaBI GATNNNNATC 2 cut(s) 59, 2082
BsaHI GRCGYC 4 cut(s) 291, 486, 830, 2771
BsaI GGTCTC 2 cut(s) 935, 1019
BsaWI WCCGGW 2 cut(s) 1100, 3203
BsaXI ACNNNNNCTCC 6 cut(s) 629, 659, 851, 881, 2455, 2485
Bse118I RCCGGY 3 cut(s) 411, 1552, 3535
Bse1I ACTGG 6 cut(s) 115, 731, 1213, 2865, 3746, 3793
Bse21I CCTNAGG 2 cut(s) 969, 1051
Bse3DI GCAATG 3 cut(s) 1923, 2311, 2805
Bse8I GATNNNNATC 2 cut(s) 59, 2082
BseBI CCWGG 4 cut(s) 946, 1603, 1704, 2127
BseCI ATCGAT 1 cut(s) 2552
BseJI GATNNNNATC 2 cut(s) 59, 2082
BseMI GCAATG 3 cut(s) 1923, 2311, 2805
BseMII CTCAG 7 cut(s) 960, 1065, 1319, 1792, 1806, 3447, 3517
BseNI ACTGG 6 cut(s) 115, 731, 1213, 2865, 3746, 3793
BseRI GAGGAG 5 cut(s) 20, 23, 304, 1542, 3576
BseSI GKGCMC 1 cut(s) 2644
BseX3I CGGCCG 2 cut(s) 409, 851
BseYI CCCAGC 2 cut(s) 1881, 2675
BsgI GTGCAG 2 cut(s) 1000, 2140
Bsh1236I CGCG 4 cut(s) 354, 548, 635, 2768
Bsh1285I CGRYCG 3 cut(s) 358, 412, 854
BshNI GGYRCC 4 cut(s) 290, 485, 960, 2212
BshVI ATCGAT 1 cut(s) 2552
BsiEI CGRYCG 3 cut(s) 358, 412, 854
BsiHKAI GWGCWC 5 cut(s) 464, 501, 702, 1334, 2644
BsiHKCI CYCGRG 3 cut(s) 649, 1622, 2333
BslFI GGGAC 8 cut(s) 311, 631, 758, 962, 1032, 1097, 1106, 3706
BsmAI GTCTC 8 cut(s) 178, 935, 1019, 1768, 1857, 2046, 3322, 3390
BsmBI CGTCTC 1 cut(s) 1857
BsmFI GGGAC 8 cut(s) 311, 631, 758, 962, 1032, 1097, 1106, 3706
Bso31I GGTCTC 2 cut(s) 935, 1019
BsoBI CYCGRG 3 cut(s) 649, 1622, 2333
Bsp1286I GDGCHC 5 cut(s) 464, 501, 702, 1334, 2644
Bsp1407I TGTACA 2 cut(s) 3074, 3720
Bsp19I CCATGG 1 cut(s) 12
Bsp68I TCGCGA 1 cut(s) 2768
BspCNI CTCAG 7 cut(s) 961, 1064, 1320, 1791, 1805, 3448, 3516
BspDI ATCGAT 1 cut(s) 2552
BspFNI CGCG 4 cut(s) 354, 548, 635, 2768
BspHI TCATGA 1 cut(s) 3183
BspMAI CTGCAG 1 cut(s) 3013
BspOI GCTAGC 2 cut(s) 1449, 1904
BspPI GGATC 5 cut(s) 2126, 3212, 3299, 3340, 3706
BspT107I GGYRCC 4 cut(s) 290, 485, 960, 2212
BspTI CTTAAG 1 cut(s) 2351
BspTNI GGTCTC 2 cut(s) 935, 1019
BsrBI CCGCTC 5 cut(s) 510, 534, 610, 850, 1643
BsrDI GCAATG 3 cut(s) 1923, 2311, 2805
BsrFI RCCGGY 3 cut(s) 411, 1552, 3535
BsrGI TGTACA 2 cut(s) 3074, 3720
BsrI ACTGG 6 cut(s) 115, 731, 1213, 2865, 3746, 3793
BssAI RCCGGY 3 cut(s) 411, 1552, 3535
BssNAI GTATAC 1 cut(s) 924
BssNI GRCGYC 4 cut(s) 291, 486, 830, 2771
BssT1I CCWWGG 3 cut(s) 12, 1651, 2788
Bst1107I GTATAC 1 cut(s) 924
Bst2UI CCWGG 4 cut(s) 946, 1603, 1704, 2127
Bst6I CTCTTC 2 cut(s) 1511, 3818
BstACI GRCGYC 4 cut(s) 291, 486, 830, 2771
BstAFI CTTAAG 1 cut(s) 2351
BstAPI GCANNNNNTGC 3 cut(s) 2072, 2672, 2816
BstAUI TGTACA 2 cut(s) 3074, 3720
BstBAI YACGTR 1 cut(s) 579
BstDEI CTNAG 9 cut(s) 969, 1051, 1328, 1416, 1778, 1792, 1844, 3456, 3503
BstDSI CCRYGG 1 cut(s) 12
BstENI CCTNNNNNAGG 1 cut(s) 2354
BstFNI CGCG 4 cut(s) 354, 548, 635, 2768
BstH2I RGCGCY 4 cut(s) 294, 489, 2114, 2498
BstHHI GCGC 6 cut(s) 293, 488, 635, 675, 2113, 2497
BstMAI GTCTC 8 cut(s) 178, 935, 1019, 1768, 1857, 2046, 3322, 3390
BstMCI CGRYCG 3 cut(s) 358, 412, 854
BstNI CCWGG 4 cut(s) 946, 1603, 1704, 2127
BstNSI RCATGY 5 cut(s) 1763, 1831, 2707, 2739, 3280
BstSFI CTRYAG 2 cut(s) 2223, 3009
BstSLI GKGCMC 1 cut(s) 2644
BstUI CGCG 4 cut(s) 354, 548, 635, 2768
BstV2I GAAGAC 1 cut(s) 153
BstX2I RGATCY 1 cut(s) 1277
BstYI RGATCY 1 cut(s) 1277
BstZ17I GTATAC 1 cut(s) 924
BstZI CGGCCG 2 cut(s) 409, 851
Bsu15I ATCGAT 1 cut(s) 2552
Bsu36I CCTNAGG 2 cut(s) 969, 1051
BsuTUI ATCGAT 1 cut(s) 2552
BtgI CCRYGG 1 cut(s) 12
BtsI GCAGTG 2 cut(s) 1689, 3788
BtsIMutI CAGTG 5 cut(s) 1689, 2651, 2858, 3707, 3788
BtuMI TCGCGA 1 cut(s) 2768
CciI TCATGA 1 cut(s) 3183
CfoI GCGC 6 cut(s) 293, 488, 635, 675, 2113, 2497
Cfr10I RCCGGY 3 cut(s) 411, 1552, 3535
Cfr9I CCCGGG 1 cut(s) 649
ClaI ATCGAT 1 cut(s) 2552
CseI GACGC 3 cut(s) 819, 1364, 2779
CsiI ACCWGGT 1 cut(s) 2125
DdeI CTNAG 9 cut(s) 969, 1051, 1328, 1416, 1778, 1792, 1844, 3456, 3503
DinI GGCGCC 2 cut(s) 292, 487
DraI TTTAAA 1 cut(s) 1612
DraIII CACNNNGTG 1 cut(s) 2657
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 5 cut(s) 409, 851, 2791, 2862, 3426
EagI CGGCCG 2 cut(s) 409, 851
Eam1104I CTCTTC 2 cut(s) 1511, 3818
EarI CTCTTC 2 cut(s) 1511, 3818
EciI GGCGGA 4 cut(s) 466, 620, 643, 1196
Ecl136II GAGCTC 2 cut(s) 700, 1332
EclXI CGGCCG 2 cut(s) 409, 851
Eco130I CCWWGG 3 cut(s) 12, 1651, 2788
Eco147I AGGCCT 1 cut(s) 2416
Eco24I GRGCYC 2 cut(s) 702, 1334
Eco31I GGTCTC 2 cut(s) 935, 1019
Eco32I GATATC 1 cut(s) 1972
Eco47I GGWCC 9 cut(s) 255, 325, 640, 732, 871, 1838, 1868, 3123, 3842
Eco47III AGCGCT 1 cut(s) 2496
Eco52I CGGCCG 2 cut(s) 409, 851
Eco53kI GAGCTC 2 cut(s) 700, 1332
Eco57I CTGAAG 3 cut(s) 363, 1574, 3132
Eco72I CACGTG 1 cut(s) 579
Eco81I CCTNAGG 2 cut(s) 969, 1051
Eco88I CYCGRG 3 cut(s) 649, 1622, 2333
EcoICRI GAGCTC 2 cut(s) 700, 1332
EcoNI CCTNNNNNAGG 1 cut(s) 2354
EcoO109I RGGNCCY 4 cut(s) 255, 325, 613, 640
EcoRI GAATTC 1 cut(s) 2527
EcoRII CCWGG 4 cut(s) 944, 1601, 1702, 2125
EcoRV GATATC 1 cut(s) 1972
EcoT14I CCWWGG 3 cut(s) 12, 1651, 2788
EcoT22I ATGCAT 1 cut(s) 3254
EcoT38I GRGCYC 2 cut(s) 702, 1334
EgeI GGCGCC 2 cut(s) 292, 487
EheI GGCGCC 2 cut(s) 292, 487
ErhI CCWWGG 3 cut(s) 12, 1651, 2788
Esp3I CGTCTC 1 cut(s) 1857
FalI AAGNNNNNCTT 2 cut(s) 1220, 1252
FaqI GGGAC 8 cut(s) 311, 631, 758, 962, 1032, 1097, 1106, 3706
FauI CCCGC 3 cut(s) 539, 603, 684
FblI GTMKAC 4 cut(s) 810, 923, 1291, 3619
FriOI GRGCYC 2 cut(s) 702, 1334
FspBI CTAG 8 cut(s) 1281, 1446, 1652, 1901, 2595, 2693, 3167, 3803
GlaI GCGC 6 cut(s) 292, 487, 634, 674, 2112, 2496
GsaI CCCAGC 2 cut(s) 1885, 2679
GsuI CTGGAG 3 cut(s) 748, 2457, 3810
HaeII RGCGCY 4 cut(s) 294, 489, 2114, 2498
HgaI GACGC 3 cut(s) 819, 1364, 2779
HhaI GCGC 6 cut(s) 293, 488, 635, 675, 2113, 2497
Hin1I GRCGYC 4 cut(s) 291, 486, 830, 2771
Hin6I GCGC 6 cut(s) 291, 486, 633, 673, 2111, 2495
HinP1I GCGC 6 cut(s) 291, 486, 633, 673, 2111, 2495
HindIII AAGCTT 1 cut(s) 3573
Hpy99I CGWCG 8 cut(s) 410, 422, 485, 829, 835, 1863, 2405, 2773
HpyCH4IV ACGT 2 cut(s) 578, 1858
HpyF3I CTNAG 9 cut(s) 969, 1051, 1328, 1416, 1778, 1792, 1844, 3456, 3503
HpySE526I ACGT 2 cut(s) 578, 1858
Hsp92I GRCGYC 4 cut(s) 291, 486, 830, 2771
HspAI GCGC 6 cut(s) 291, 486, 633, 673, 2111, 2495
KasI GGCGCC 2 cut(s) 290, 485
KpnI GGTACC 1 cut(s) 964
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
LweI GCATC 3 cut(s) 30, 2291, 3459
MabI ACCWGGT 1 cut(s) 2125
MaeI CTAG 8 cut(s) 1281, 1446, 1652, 1901, 2595, 2693, 3167, 3803
MaeII ACGT 2 cut(s) 578, 1858
MaeIII GTNAC 5 cut(s) 2434, 2461, 2487, 2613, 3641
MbiI CCGCTC 5 cut(s) 510, 534, 610, 850, 1643
MflI RGATCY 1 cut(s) 1277
MhlI GDGCHC 5 cut(s) 464, 501, 702, 1334, 2644
MlsI TGGCCA 2 cut(s) 2793, 2864
MluNI TGGCCA 2 cut(s) 2793, 2864
Mly113I GGCGCC 2 cut(s) 291, 486
MmeI TCCRAC 6 cut(s) 147, 837, 849, 2424, 3065, 3538
Mox20I TGGCCA 2 cut(s) 2793, 2864
Mph1103I ATGCAT 1 cut(s) 3254
MroNI GCCGGC 1 cut(s) 411
MscI TGGCCA 2 cut(s) 2793, 2864
MseI TTAA 8 cut(s) 282, 708, 783, 935, 1059, 1611, 2352, 2720
MslI CAYNNNNRTG 1 cut(s) 3213
Msp20I TGGCCA 2 cut(s) 2793, 2864
MspA1I CMGCKG 5 cut(s) 624, 880, 1031, 1710, 3152
MspCI CTTAAG 1 cut(s) 2351
MvaI CCWGG 4 cut(s) 946, 1603, 1704, 2127
MvnI CGCG 4 cut(s) 354, 548, 635, 2768
NaeI GCCGGC 1 cut(s) 413
NarI GGCGCC 2 cut(s) 291, 486
NciI CCSGG 8 cut(s) 538, 569, 588, 650, 651, 736, 886, 2821
NcoI CCATGG 1 cut(s) 12
NgoMIV GCCGGC 1 cut(s) 411
NheI GCTAGC 2 cut(s) 1445, 1900
NmeAIII GCCGAG 2 cut(s) 246, 3005
NmuCI GTSAC 3 cut(s) 2434, 2461, 2613
NruI TCGCGA 1 cut(s) 2768
NsiI ATGCAT 1 cut(s) 3254
NspI RCATGY 5 cut(s) 1763, 1831, 2707, 2739, 3280
PagI TCATGA 1 cut(s) 3183
PceI AGGCCT 1 cut(s) 2416
PcsI WCGNNNNNNNCGW 3 cut(s) 351, 414, 3341
PdiI GCCGGC 1 cut(s) 413
PflFI GACNNNGTC 2 cut(s) 829, 2544
PluTI GGCGCC 2 cut(s) 294, 489
PmaCI CACGTG 1 cut(s) 579
PmlI CACGTG 1 cut(s) 579
Ppu21I YACGTR 1 cut(s) 579
PpuMI RGGWCCY 3 cut(s) 255, 325, 640
Psp124BI GAGCTC 2 cut(s) 702, 1334
Psp5II RGGWCCY 3 cut(s) 255, 325, 640
Psp6I CCWGG 4 cut(s) 944, 1601, 1702, 2125
PspCI CACGTG 1 cut(s) 579
PspFI CCCAGC 2 cut(s) 1881, 2675
PspGI CCWGG 4 cut(s) 944, 1601, 1702, 2125
PspPPI RGGWCCY 3 cut(s) 255, 325, 640
PstI CTGCAG 1 cut(s) 3013
PsuI RGATCY 1 cut(s) 1277
PsyI GACNNNGTC 2 cut(s) 829, 2544
PvuII CAGCTG 2 cut(s) 624, 3152
RruI TCGCGA 1 cut(s) 2768
RseI CAYNNNNRTG 1 cut(s) 3213
SacI GAGCTC 2 cut(s) 702, 1334
SaqAI TTAA 8 cut(s) 282, 708, 783, 935, 1059, 1611, 2352, 2720
ScaI AGTACT 1 cut(s) 725
SduI GDGCHC 5 cut(s) 464, 501, 702, 1334, 2644
SexAI ACCWGGT 1 cut(s) 2125
SfaNI GCATC 3 cut(s) 30, 2291, 3459
SfcI CTRYAG 2 cut(s) 2223, 3009
SfoI GGCGCC 2 cut(s) 292, 487
SinI GGWCC 9 cut(s) 255, 325, 640, 732, 871, 1838, 1868, 3123, 3842
SmaI CCCGGG 1 cut(s) 651
SmiMI CAYNNNNRTG 1 cut(s) 3213
SmlI CTYRAG 3 cut(s) 199, 2351, 3048
SmoI CTYRAG 3 cut(s) 199, 2351, 3048
SpeI ACTAGT 1 cut(s) 3802
SseBI AGGCCT 1 cut(s) 2416
SspDI GGCGCC 2 cut(s) 290, 485
SspI AATATT 1 cut(s) 3852
SspMI CTAG 8 cut(s) 1281, 1446, 1652, 1901, 2595, 2693, 3167, 3803
SstI GAGCTC 2 cut(s) 702, 1334
StuI AGGCCT 1 cut(s) 2416
StyI CCWWGG 3 cut(s) 12, 1651, 2788
TaiI ACGT 2 cut(s) 581, 1861
TatI WGTACW 5 cut(s) 309, 723, 1266, 3074, 3720
TauI GCSGC 7 cut(s) 291, 470, 473, 513, 853, 2232, 3428
Tru1I TTAA 8 cut(s) 282, 708, 783, 935, 1059, 1611, 2352, 2720
Tru9I TTAA 8 cut(s) 282, 708, 783, 935, 1059, 1611, 2352, 2720
TscAI CASTG 5 cut(s) 1689, 2658, 2865, 3714, 3788
TseFI GTSAC 3 cut(s) 2434, 2461, 2613
Tsp45I GTSAC 3 cut(s) 2434, 2461, 2613
TspDTI ATGAA 7 cut(s) 608, 1439, 1529, 2262, 3172, 3269, 3810
TspGWI ACGGA 1 cut(s) 3352
TspMI CCCGGG 1 cut(s) 649
TspRI CASTG 5 cut(s) 1689, 2658, 2865, 3714, 3788
Tth111I GACNNNGTC 2 cut(s) 829, 2544
Vha464I CTTAAG 1 cut(s) 2351
VneI GTGCAC 1 cut(s) 2640
VpaK11BI GGWCC 9 cut(s) 255, 325, 640, 732, 871, 1838, 1868, 3123, 3842
XagI CCTNNNNNAGG 1 cut(s) 2354
XapI RAATTY 6 cut(s) 1315, 1372, 1561, 1873, 2527, 3669
XceI RCATGY 5 cut(s) 1763, 1831, 2707, 2739, 3280
XcmI CCANNNNNNNNNTGG 1 cut(s) 1878
XmaI CCCGGG 1 cut(s) 649
XmaJI CCTAGG 1 cut(s) 1651
XmiI GTMKAC 4 cut(s) 810, 923, 1291, 3619
XspI CTAG 8 cut(s) 1281, 1446, 1652, 1901, 2595, 2693, 3167, 3803
ZrmI AGTACT 1 cut(s) 725
Zsp2I ATGCAT 1 cut(s) 3254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.