Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000517.1

Orthogroup ID

OG0011114

Physical Location & Seq

Genomic Coordinates Reverse (-)

65659 .. 68364

Gene Structure 2706 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000517.1_g000017.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

atgccttcttccatggttcccatctctctcctcctccccatactccaaaccctgattctcatctccacaaactccaatcccattcccaaaactacttcaccccaaagcccaacccagttctccaacactcttccatatcccactccaaactcaaacgggtcttcaagaactgtctcgaagattctctggtacgcaccctcgagaaccaacaaggttatagtccatggcaactccaccatttgcagtcgcaacaggacctttcagctcggcttcttcccctttaatggcggcgcctacttggcaataatgtactcctcaattcaggtccccaccgtagtctgggtcgccaaccgcgaccgcccagtcaagaatctcacttcagccagactcgaaatcacagccaccgacggccggcttgtcgttatagactccgataactcgactctctgggccagccagaacgccgccgccgcctccgccgttggtgcccaagtcgtgctcttggagagcggcaatctggtgctgctcacccgctccggggaactcgcgtggcagagcttcgatcacccggctgacacgtggctccccggcatgaatctgacggcggagcggggcctgaccagctggcggagcgcggaggacccgtccccgggtttgtattcgctgcggttgcgcccacaggattacggtgagtttgagctagtttttaacggtagtgttgagtactggaggaccggggtttgggacggtaaggctttcgctgatgtgccggagatgactgttaagtatatctatatgtttcacttcatagacccgttcaagccgacggcgtcgtttgggttcaccgagcggccgttggagagagggttggacccgccgctgacccggttccagatagaccattcgggtcagctccggcagtatacttggggttcaagcgagacctgggacaagttttggtaccagcctgaggacaagtgcagagtgtttggtttgtgtgggaggtttggggtttgtgatagtgagaccgctgaaccctgtcagtgtccctcagggtttaagcctgtggatgagtctggttgggactctggggactattccggtgggtgtgagaggtttggtgatgtgccttgtgaggagagagatgagggtttcgtggaggttcaggttgagagttttgcggaaagttggcataatagttcgattactggtagggatggttgtgaaaagatgtgcttgcaagtttgttcttgtattggttttcagtacaacgagaggtctagtttgtgtagacattatttcgggtctgtgtcgaatttgaggaatgtgagctctgatggtaatagcagtatggacgctggtagtgttttgaatttgaaggtacgaaaaggtgtgatcttgaagaacaggaaggctaaggttatgcattatacagtttttggtgctagcattgttgggtcagttgcggttttgggttttctggtggtggttgtattgattaggagaagaaggatgaagaggaatggaggagcagaggaaagtgttttgctgccggtgttgaatttgaaggtattttcctacaaagagctccagactgcaacctggggttttaaagagaaacttgggcatggtggctttggagcggttttcctaggggagctatcagaccgtactcttgttgcagtgaaacgcttggagaggccaggcagcggagagcaacaattccgagcagaagtttgcaccattggcaacattcagcatgtcaatcttgtgagactcagaggcttctgctcagaagattctcatagacttctggtatatgattacatgccaaatggtcctctaagtgtgtatctacgtcgagacggtccaaatttgagctgggatgttaggtttcggctagcggttggtacggcaagaggcattgcatatttacatgaggggtgtagagattccataatccattgtgatatcaaaccagaaaacattttgcttgattgtgattacacggcaaaggtgtcagattttgggttagcaaagctaattcacagagactttagtggagcattagctgctgatggtaatcatggctatacctatggctatgtagcgccagagtgcagacctggtgatccaatcaccacaaaagccgatgtttacagctatggaaagacattgatagaattacttggaggccatagaatgtgggaggcacctccatctgctggcggcagagagggtggaaatgaaataacagattcttggtgctttccttcgtgggcggcacagcagataattgatggcaatgtggtggctgtaattgatgatagacttgggagcaagtataaccttaaggaggcagagcgtgttgcattagtggcggtgtggtgcatacaggacgacgaggcaacaaggcctacaatggggatggtagtgacaatgttggaaggggttgtggaagtgactgttcctccagcaccaaagttgttacaagcgctggtttcaggggagtcattctgtggggtgaattccgattctggacacagtccatcgattgccagcgacaacttctctggttgtaatacgaaattatctagttgcggttcagagtcgtcacttggtaatgtctcttccttagtaaatgagaatgtgcatgaaaaccgaagaagttcagtgagctttactgtcaatactgaccatagctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_2 Pkinase S_locus_glycop

Protein Analysis

901

Amino Acids

99.16

Weight (kDa)

5.97

Isoelectric Point (pI)

42.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011114)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00340 AT4G00340
fragaria_vesca	FvH4_7g14760
malus_domestica	MD01G1066300.v1.1
prunus_persica	Prupe.2G173300_v2.0.a1
pyrus_communis	pycom01g09580 pycom05g10610
rosa_chinensis	RchiOBHm_Chr1g0356701
rosa_laevigata	RLG00000028086
rosa_multiflora	Rmu_sc0000517.1_g000017 Rmu_sc0020364.1_g000001 Rmu_sc0033799.1_g000001 Rmu_sc0033800.1_g000001
rosa_roxburghii	Rroxscaffold_4G00299390
rosa_rugosa	Rorug01G0250900
rosa_samantha	Rh1AG264800 Rh1BG232300 Rh1CG248500 Rh1DG259900
rosa_wichuraiana	Rw1G023430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	362
Acc65I	GGTACC	1 cut(s)	960
AccB1I	GGYRCC	4 cut(s)	290, 485, 960, 2212
AccB7I	CCANNNNNTGG	1 cut(s)	2225
AccBSI	CCGCTC	5 cut(s)	510, 534, 610, 850, 1643
AccI	GTMKAC	2 cut(s)	923, 1291
AccII	CGCG	3 cut(s)	354, 548, 635
AclWI	GGATC	1 cut(s)	2126
AcoI	YGGCCR	2 cut(s)	409, 851
AcsI	RAATTY	5 cut(s)	1315, 1372, 1561, 1873, 2527
AcuI	CTGAAG	1 cut(s)	363
AcvI	CACGTG	1 cut(s)	579
AcyI	GRCGYC	2 cut(s)	291, 830
AfaI	GTAC	8 cut(s)	191, 311, 725, 962, 1268, 1383, 1672, 1912
AfeI	AGCGCT	1 cut(s)	2496
AflII	CTTAAG	1 cut(s)	2351
AflIII	ACRYGT	1 cut(s)	576
AgsI	TTSAA	8 cut(s)	165, 820, 936, 1372, 1378, 1402, 1561, 1567
AjnI	CCWGG	4 cut(s)	944, 1601, 1702, 2125
AjuI	GAANNNNNNNTTGG	2 cut(s)	39, 71
Alw21I	GWGCWC	3 cut(s)	501, 1334, 1590
Alw26I	GTCTC	7 cut(s)	178, 935, 1019, 1768, 1857, 2046, 2632
AlwI	GGATC	1 cut(s)	2126
Ama87I	CYCGRG	2 cut(s)	199, 649
Aor51HI	AGCGCT	1 cut(s)	2496
AoxI	GGCC	7 cut(s)	409, 450, 613, 851, 1700, 2194, 2414
ApeKI	GCWGC	5 cut(s)	523, 664, 1549, 1707, 2072
ApoI	RAATTY	5 cut(s)	1315, 1372, 1561, 1873, 2527
Asp700I	GAANNNNTTC	1 cut(s)	2668
Asp718I	GGTACC	1 cut(s)	960
AspA2I	CCTAGG	1 cut(s)	1651
AspLEI	GCGC	5 cut(s)	293, 635, 675, 2113, 2497
AspS9I	GGNCC	9 cut(s)	255, 325, 450, 613, 640, 732, 871, 1838, 1868
AsuC2I	CCSGG	7 cut(s)	538, 569, 588, 650, 651, 736, 886
AsuHPI	GGTGA	9 cut(s)	90, 520, 557, 701, 835, 1133, 2131, 2141, 2536
AsuNHI	GCTAGC	2 cut(s)	1445, 1900
AvaI	CYCGRG	2 cut(s)	199, 649
AvaII	GGWCC	7 cut(s)	255, 325, 640, 732, 871, 1838, 1868
AvrII	CCTAGG	1 cut(s)	1651
AxyI	CCTNAGG	2 cut(s)	969, 1051
BaeGI	GKGCMC	1 cut(s)	490
BanI	GGYRCC	4 cut(s)	290, 485, 960, 2212
BanII	GRGCYC	2 cut(s)	1334, 1590
BarI	GAAGNNNNNNTAC	2 cut(s)	2614, 2646
BbrPI	CACGTG	1 cut(s)	579
BbsI	GAAGAC	1 cut(s)	153
Bbv12I	GWGCWC	3 cut(s)	501, 1334, 1590
BbvI	GCAGC	5 cut(s)	510, 651, 1536, 1719, 2059
BccI	CCATC	8 cut(s)	29, 1211, 1331, 2072, 2227, 2294, 2422, 2557
BceAI	ACGGC	7 cut(s)	424, 464, 618, 838, 843, 1929, 2025
BciT130I	CCWGG	4 cut(s)	946, 1603, 1704, 2127
BcnI	CCSGG	7 cut(s)	538, 569, 588, 650, 651, 736, 886
BcoDI	GTCTC	7 cut(s)	178, 935, 1019, 1768, 1857, 2046, 2632
BfaI	CTAG	6 cut(s)	701, 1281, 1446, 1652, 1901, 2595
BfoI	RGCGCY	3 cut(s)	294, 2114, 2498
BfrI	CTTAAG	1 cut(s)	2351
BglI	GCCNNNNNGGC	1 cut(s)	299
BlnI	CCTAGG	1 cut(s)	1651
BmcAI	AGTACT	1 cut(s)	725
Bme18I	GGWCC	7 cut(s)	255, 325, 640, 732, 871, 1838, 1868
BmeT110I	CYCGRG	2 cut(s)	199, 649
BmgT120I	GGNCC	9 cut(s)	255, 325, 450, 613, 640, 732, 871, 1838, 1868
BmrI	ACTGGG	2 cut(s)	109, 356
BmtI	GCTAGC	2 cut(s)	1449, 1904
BmuI	ACTGGG	2 cut(s)	109, 356
BpiI	GAAGAC	1 cut(s)	153
BpmI	CTGGAG	3 cut(s)	748, 1574, 2457
Bpu10I	CCTNAGC	1 cut(s)	1416
BpuMI	CCSGG	7 cut(s)	538, 569, 588, 650, 651, 736, 886
Bsa29I	ATCGAT	1 cut(s)	2552
BsaAI	YACGTR	1 cut(s)	579
BsaBI	GATNNNNATC	2 cut(s)	59, 2082
BsaHI	GRCGYC	2 cut(s)	291, 830
BsaI	GGTCTC	2 cut(s)	935, 1019
BsaWI	WCCGGW	1 cut(s)	1100
BsaXI	ACNNNNNCTCC	6 cut(s)	629, 659, 851, 881, 2455, 2485
Bse118I	RCCGGY	2 cut(s)	411, 1552
Bse1I	ACTGG	4 cut(s)	115, 362, 731, 1213
Bse21I	CCTNAGG	2 cut(s)	969, 1051
Bse3DI	GCAATG	2 cut(s)	1923, 2311
Bse8I	GATNNNNATC	2 cut(s)	59, 2082
BseBI	CCWGG	4 cut(s)	946, 1603, 1704, 2127
BseCI	ATCGAT	1 cut(s)	2552
BseGI	GGATG	5 cut(s)	1075, 1222, 1518, 1891, 2433
BseJI	GATNNNNATC	2 cut(s)	59, 2082
BseMI	GCAATG	2 cut(s)	1923, 2311
BseMII	CTCAG	4 cut(s)	960, 1065, 1792, 1806
BseNI	ACTGG	4 cut(s)	115, 362, 731, 1213
BseRI	GAGGAG	5 cut(s)	20, 23, 304, 1151, 1542
BseSI	GKGCMC	1 cut(s)	490
BseX3I	CGGCCG	2 cut(s)	409, 851
BseXI	GCAGC	5 cut(s)	510, 651, 1536, 1719, 2059
BseYI	CCCAGC	1 cut(s)	1881
BsgI	GTGCAG	2 cut(s)	1000, 2140
Bsh1236I	CGCG	3 cut(s)	354, 548, 635
Bsh1285I	CGRYCG	3 cut(s)	358, 412, 854
BshFI	GGCC	7 cut(s)	411, 452, 615, 853, 1702, 2196, 2416
BshNI	GGYRCC	4 cut(s)	290, 485, 960, 2212
BshVI	ATCGAT	1 cut(s)	2552
BsiEI	CGRYCG	3 cut(s)	358, 412, 854
BsiHKAI	GWGCWC	3 cut(s)	501, 1334, 1590
BsiHKCI	CYCGRG	2 cut(s)	199, 649
BslFI	GGGAC	7 cut(s)	311, 631, 758, 962, 1032, 1097, 1106
BsmAI	GTCTC	7 cut(s)	178, 935, 1019, 1768, 1857, 2046, 2632
BsmBI	CGTCTC	1 cut(s)	1857
BsmFI	GGGAC	7 cut(s)	311, 631, 758, 962, 1032, 1097, 1106
BsnI	GGCC	7 cut(s)	411, 452, 615, 853, 1702, 2196, 2416
Bso31I	GGTCTC	2 cut(s)	935, 1019
BsoBI	CYCGRG	2 cut(s)	199, 649
Bsp1286I	GDGCHC	4 cut(s)	490, 501, 1334, 1590
Bsp143I	GATC	3 cut(s)	562, 1395, 2131
Bsp19I	CCATGG	2 cut(s)	12, 223
BspANI	GGCC	7 cut(s)	411, 452, 615, 853, 1702, 2196, 2416
BspCNI	CTCAG	4 cut(s)	961, 1064, 1791, 1805
BspDI	ATCGAT	1 cut(s)	2552
BspFNI	CGCG	3 cut(s)	354, 548, 635
BspOI	GCTAGC	2 cut(s)	1449, 1904
BspPI	GGATC	1 cut(s)	2126
BspT107I	GGYRCC	4 cut(s)	290, 485, 960, 2212
BspTI	CTTAAG	1 cut(s)	2351
BspTNI	GGTCTC	2 cut(s)	935, 1019
BsrBI	CCGCTC	5 cut(s)	510, 534, 610, 850, 1643
BsrDI	GCAATG	2 cut(s)	1923, 2311
BsrFI	RCCGGY	2 cut(s)	411, 1552
BsrI	ACTGG	4 cut(s)	115, 362, 731, 1213
BssAI	RCCGGY	2 cut(s)	411, 1552
BssMI	GATC	3 cut(s)	562, 1395, 2131
BssNAI	GTATAC	1 cut(s)	924
BssNI	GRCGYC	2 cut(s)	291, 830
BssT1I	CCWWGG	3 cut(s)	12, 223, 1651
Bst1107I	GTATAC	1 cut(s)	924
Bst2UI	CCWGG	4 cut(s)	946, 1603, 1704, 2127
Bst6I	CTCTTC	3 cut(s)	135, 1511, 2635
BstACI	GRCGYC	2 cut(s)	291, 830
BstAFI	CTTAAG	1 cut(s)	2351
BstAPI	GCANNNNNTGC	1 cut(s)	2072
BstBAI	YACGTR	1 cut(s)	579
BstC8I	GCNNGC	8 cut(s)	413, 454, 626, 1238, 1447, 1902, 2227, 2560
BstDEI	CTNAG	7 cut(s)	969, 1051, 1416, 1778, 1792, 1844, 2635
BstDSI	CCRYGG	2 cut(s)	12, 223
BstENI	CCTNNNNNAGG	1 cut(s)	2354
BstF5I	GGATG	5 cut(s)	1075, 1222, 1518, 1891, 2433
BstFNI	CGCG	3 cut(s)	354, 548, 635
BstH2I	RGCGCY	3 cut(s)	294, 2114, 2498
BstHHI	GCGC	5 cut(s)	293, 635, 675, 2113, 2497
BstKTI	GATC	3 cut(s)	565, 1398, 2134
BstMAI	GTCTC	7 cut(s)	178, 935, 1019, 1768, 1857, 2046, 2632
BstMBI	GATC	3 cut(s)	562, 1395, 2131
BstMCI	CGRYCG	3 cut(s)	358, 412, 854
BstNI	CCWGG	4 cut(s)	946, 1603, 1704, 2127
BstNSI	RCATGY	2 cut(s)	1763, 1831
BstSLI	GKGCMC	1 cut(s)	490
BstUI	CGCG	3 cut(s)	354, 548, 635
BstV1I	GCAGC	5 cut(s)	510, 651, 1536, 1719, 2059
BstV2I	GAAGAC	1 cut(s)	153
BstZ17I	GTATAC	1 cut(s)	924
BstZI	CGGCCG	2 cut(s)	409, 851
Bsu15I	ATCGAT	1 cut(s)	2552
Bsu36I	CCTNAGG	2 cut(s)	969, 1051
BsuRI	GGCC	7 cut(s)	411, 452, 615, 853, 1702, 2196, 2416
BsuTUI	ATCGAT	1 cut(s)	2552
BtgI	CCRYGG	2 cut(s)	12, 223
BtsCI	GGATG	5 cut(s)	1075, 1222, 1518, 1891, 2433
BtsI	GCAGTG	1 cut(s)	1689
BtsIMutI	CAGTG	3 cut(s)	1049, 1689, 2679
Cac8I	GCNNGC	8 cut(s)	413, 454, 626, 1238, 1447, 1902, 2227, 2560
CfoI	GCGC	5 cut(s)	293, 635, 675, 2113, 2497
Cfr10I	RCCGGY	2 cut(s)	411, 1552
Cfr13I	GGNCC	9 cut(s)	255, 325, 450, 613, 640, 732, 871, 1838, 1868
Cfr9I	CCCGGG	1 cut(s)	649
ClaI	ATCGAT	1 cut(s)	2552
CseI	GACGC	2 cut(s)	819, 1364
CsiI	ACCWGGT	1 cut(s)	2125
Csp6I	GTAC	8 cut(s)	190, 310, 724, 961, 1267, 1382, 1671, 1911
CviAII	CATG	9 cut(s)	13, 224, 592, 1628, 1760, 1828, 1937, 2087, 2654
CviQI	GTAC	8 cut(s)	190, 310, 724, 961, 1267, 1382, 1671, 1911
DdeI	CTNAG	7 cut(s)	969, 1051, 1416, 1778, 1792, 1844, 2635
DinI	GGCGCC	1 cut(s)	292
DpnI	GATC	3 cut(s)	564, 1397, 2133
DpnII	GATC	3 cut(s)	562, 1395, 2131
DraI	TTTAAA	1 cut(s)	1612
DrdI	GACNNNNNNGTC	1 cut(s)	362
DseDI	GACNNNNNNGTC	1 cut(s)	362
EaeI	YGGCCR	2 cut(s)	409, 851
EagI	CGGCCG	2 cut(s)	409, 851
Eam1104I	CTCTTC	3 cut(s)	135, 1511, 2635
EarI	CTCTTC	3 cut(s)	135, 1511, 2635
EciI	GGCGGA	3 cut(s)	466, 620, 643
Ecl136II	GAGCTC	2 cut(s)	1332, 1588
EclXI	CGGCCG	2 cut(s)	409, 851
Eco130I	CCWWGG	3 cut(s)	12, 223, 1651
Eco147I	AGGCCT	1 cut(s)	2416
Eco24I	GRGCYC	2 cut(s)	1334, 1590
Eco31I	GGTCTC	2 cut(s)	935, 1019
Eco32I	GATATC	1 cut(s)	1972
Eco47I	GGWCC	7 cut(s)	255, 325, 640, 732, 871, 1838, 1868
Eco47III	AGCGCT	1 cut(s)	2496
Eco52I	CGGCCG	2 cut(s)	409, 851
Eco53kI	GAGCTC	2 cut(s)	1332, 1588
Eco57I	CTGAAG	1 cut(s)	363
Eco72I	CACGTG	1 cut(s)	579
Eco81I	CCTNAGG	2 cut(s)	969, 1051
Eco88I	CYCGRG	2 cut(s)	199, 649
EcoICRI	GAGCTC	2 cut(s)	1332, 1588
EcoNI	CCTNNNNNAGG	1 cut(s)	2354
EcoO109I	RGGNCCY	4 cut(s)	255, 325, 613, 640
EcoRI	GAATTC	1 cut(s)	2527
EcoRII	CCWGG	4 cut(s)	944, 1601, 1702, 2125
EcoRV	GATATC	1 cut(s)	1972
EcoT14I	CCWWGG	3 cut(s)	12, 223, 1651
EcoT22I	ATGCAT	1 cut(s)	1428
EcoT38I	GRGCYC	2 cut(s)	1334, 1590
EgeI	GGCGCC	1 cut(s)	292
EheI	GGCGCC	1 cut(s)	292
ErhI	CCWWGG	3 cut(s)	12, 223, 1651
Esp3I	CGTCTC	1 cut(s)	1857
FaeI	CATG	9 cut(s)	16, 227, 595, 1631, 1763, 1831, 1940, 2090, 2657
FalI	AAGNNNNNCTT	4 cut(s)	1220, 1252, 1605, 1637
FaqI	GGGAC	7 cut(s)	311, 631, 758, 962, 1032, 1097, 1106
FatI	CATG	9 cut(s)	12, 223, 591, 1627, 1759, 1827, 1936, 2086, 2653
FauI	CCCGC	3 cut(s)	539, 603, 882
FblI	GTMKAC	2 cut(s)	923, 1291
FokI	GGATG	5 cut(s)	1082, 1229, 1525, 1898, 2440
FriOI	GRGCYC	2 cut(s)	1334, 1590
FspBI	CTAG	6 cut(s)	701, 1281, 1446, 1652, 1901, 2595
GlaI	GCGC	5 cut(s)	292, 634, 674, 2112, 2496
GsaI	CCCAGC	1 cut(s)	1885
GsuI	CTGGAG	3 cut(s)	748, 1574, 2457
HaeII	RGCGCY	3 cut(s)	294, 2114, 2498
HaeIII	GGCC	7 cut(s)	411, 452, 615, 853, 1702, 2196, 2416
HgaI	GACGC	2 cut(s)	819, 1364
HhaI	GCGC	5 cut(s)	293, 635, 675, 2113, 2497
Hin1I	GRCGYC	2 cut(s)	291, 830
Hin1II	CATG	9 cut(s)	16, 227, 595, 1631, 1763, 1831, 1940, 2090, 2657
Hin6I	GCGC	5 cut(s)	291, 633, 673, 2111, 2495
HinP1I	GCGC	5 cut(s)	291, 633, 673, 2111, 2495
HphI	GGTGA	9 cut(s)	90, 520, 557, 701, 835, 1133, 2131, 2141, 2536
Hpy166II	GTNNAC	4 cut(s)	843, 924, 1292, 2158
Hpy188III	TCNNGA	9 cut(s)	165, 175, 201, 367, 892, 1399, 1591, 1862, 2538
Hpy8I	GTNNAC	4 cut(s)	843, 924, 1292, 2158
Hpy99I	CGWCG	5 cut(s)	410, 829, 835, 1863, 2405
HpyAV	CCTTC	7 cut(s)	15, 1372, 1405, 1503, 1561, 2283, 2441
HpyCH4IV	ACGT	2 cut(s)	578, 1858
HpyF3I	CTNAG	7 cut(s)	969, 1051, 1416, 1778, 1792, 1844, 2635
HpySE526I	ACGT	2 cut(s)	578, 1858
Hsp92I	GRCGYC	2 cut(s)	291, 830
Hsp92II	CATG	9 cut(s)	16, 227, 595, 1631, 1763, 1831, 1940, 2090, 2657
HspAI	GCGC	5 cut(s)	291, 633, 673, 2111, 2495
KasI	GGCGCC	1 cut(s)	290
KpnI	GGTACC	1 cut(s)	964
KroI	GCCGGC	1 cut(s)	411
KroNI	GCCGGC	1 cut(s)	413
Kzo9I	GATC	3 cut(s)	562, 1395, 2131
Lsp1109I	GCAGC	5 cut(s)	510, 651, 1536, 1719, 2059
MabI	ACCWGGT	1 cut(s)	2125
MaeI	CTAG	6 cut(s)	701, 1281, 1446, 1652, 1901, 2595
MaeII	ACGT	2 cut(s)	578, 1858
MaeIII	GTNAC	4 cut(s)	2434, 2461, 2487, 2613
MalI	GATC	3 cut(s)	564, 1397, 2133
MbiI	CCGCTC	5 cut(s)	510, 534, 610, 850, 1643
MboI	GATC	3 cut(s)	562, 1395, 2131
MhlI	GDGCHC	4 cut(s)	490, 501, 1334, 1590
Mly113I	GGCGCC	1 cut(s)	291
MlyI	GAGTC	8 cut(s)	381, 422, 436, 1079, 1082, 1770, 2519, 2618
MmeI	TCCRAC	4 cut(s)	147, 837, 849, 2424
Mph1103I	ATGCAT	1 cut(s)	1428
MroNI	GCCGGC	1 cut(s)	411
MroXI	GAANNNNTTC	1 cut(s)	2668
MseI	TTAA	6 cut(s)	282, 708, 783, 1059, 1611, 2352
MspA1I	CMGCKG	4 cut(s)	624, 880, 1031, 1710
MspCI	CTTAAG	1 cut(s)	2351
MvaI	CCWGG	4 cut(s)	946, 1603, 1704, 2127
MvnI	CGCG	3 cut(s)	354, 548, 635
NaeI	GCCGGC	1 cut(s)	413
NarI	GGCGCC	1 cut(s)	291
NciI	CCSGG	7 cut(s)	538, 569, 588, 650, 651, 736, 886
NcoI	CCATGG	2 cut(s)	12, 223
NdeII	GATC	3 cut(s)	562, 1395, 2131
NgoMIV	GCCGGC	1 cut(s)	411
NheI	GCTAGC	2 cut(s)	1445, 1900
NlaIII	CATG	9 cut(s)	16, 227, 595, 1631, 1763, 1831, 1940, 2090, 2657
NmeAIII	GCCGAG	1 cut(s)	246
NmuCI	GTSAC	3 cut(s)	2434, 2461, 2613
NsiI	ATGCAT	1 cut(s)	1428
NspI	RCATGY	2 cut(s)	1763, 1831
PaeR7I	CTCGAG	1 cut(s)	199
PceI	AGGCCT	1 cut(s)	2416
PcsI	WCGNNNNNNNCGW	1 cut(s)	351
PdiI	GCCGGC	1 cut(s)	413
PdmI	GAANNNNTTC	1 cut(s)	2668
PfeI	GAWTC	8 cut(s)	55, 181, 370, 595, 1799, 1952, 2258, 2534
PflFI	GACNNNGTC	2 cut(s)	829, 2544
PflMI	CCANNNNNTGG	1 cut(s)	2225
PleI	GAGTC	8 cut(s)	381, 422, 436, 1079, 1081, 1770, 2518, 2617
PluTI	GGCGCC	1 cut(s)	294
PmaCI	CACGTG	1 cut(s)	579
PmlI	CACGTG	1 cut(s)	579
PpsI	GAGTC	8 cut(s)	381, 422, 436, 1079, 1081, 1770, 2518, 2617
Ppu21I	YACGTR	1 cut(s)	579
PpuMI	RGGWCCY	3 cut(s)	255, 325, 640
Psp124BI	GAGCTC	2 cut(s)	1334, 1590
Psp5II	RGGWCCY	3 cut(s)	255, 325, 640
Psp6I	CCWGG	4 cut(s)	944, 1601, 1702, 2125
PspCI	CACGTG	1 cut(s)	579
PspFI	CCCAGC	1 cut(s)	1881
PspGI	CCWGG	4 cut(s)	944, 1601, 1702, 2125
PspPI	GGNCC	9 cut(s)	255, 325, 450, 613, 640, 732, 871, 1838, 1868
PspPPI	RGGWCCY	3 cut(s)	255, 325, 640
PsyI	GACNNNGTC	2 cut(s)	829, 2544
PvuII	CAGCTG	1 cut(s)	624
RsaI	GTAC	8 cut(s)	191, 311, 725, 962, 1268, 1383, 1672, 1912
RsaNI	GTAC	8 cut(s)	190, 310, 724, 961, 1267, 1382, 1671, 1911
SacI	GAGCTC	2 cut(s)	1334, 1590
SaqAI	TTAA	6 cut(s)	282, 708, 783, 1059, 1611, 2352
Sau3AI	GATC	3 cut(s)	562, 1395, 2131
Sau96I	GGNCC	9 cut(s)	255, 325, 450, 613, 640, 732, 871, 1838, 1868
ScaI	AGTACT	1 cut(s)	725
SchI	GAGTC	8 cut(s)	381, 422, 436, 1079, 1082, 1770, 2519, 2618
SduI	GDGCHC	4 cut(s)	490, 501, 1334, 1590
SexAI	ACCWGGT	1 cut(s)	2125
SfoI	GGCGCC	1 cut(s)	292
Sfr274I	CTCGAG	1 cut(s)	199
SinI	GGWCC	7 cut(s)	255, 325, 640, 732, 871, 1838, 1868
SlaI	CTCGAG	1 cut(s)	199
SmaI	CCCGGG	1 cut(s)	651
SmlI	CTYRAG	2 cut(s)	199, 2351
SmoI	CTYRAG	2 cut(s)	199, 2351
SseBI	AGGCCT	1 cut(s)	2416
SspDI	GGCGCC	1 cut(s)	290
SspMI	CTAG	6 cut(s)	701, 1281, 1446, 1652, 1901, 2595
SstI	GAGCTC	2 cut(s)	1334, 1590
StuI	AGGCCT	1 cut(s)	2416
StyI	CCWWGG	3 cut(s)	12, 223, 1651
TaiI	ACGT	2 cut(s)	581, 1861
TaqI	TCGA	9 cut(s)	176, 200, 390, 440, 561, 1202, 1313, 1861, 2552
TatI	WGTACW	3 cut(s)	309, 723, 1266
TauI	GCSGC	9 cut(s)	291, 467, 470, 473, 513, 853, 880, 2232, 2285
TfiI	GAWTC	8 cut(s)	55, 181, 370, 595, 1799, 1952, 2258, 2534
Tru1I	TTAA	6 cut(s)	282, 708, 783, 1059, 1611, 2352
Tru9I	TTAA	6 cut(s)	282, 708, 783, 1059, 1611, 2352
TscAI	CASTG	3 cut(s)	1049, 1689, 2679
TseFI	GTSAC	3 cut(s)	2434, 2461, 2613
TseI	GCWGC	5 cut(s)	523, 664, 1549, 1707, 2072
Tsp45I	GTSAC	3 cut(s)	2434, 2461, 2613
TspDTI	ATGAA	5 cut(s)	608, 796, 1529, 2262, 2670
TspMI	CCCGGG	1 cut(s)	649
TspRI	CASTG	3 cut(s)	1049, 1689, 2679
Tth111I	GACNNNGTC	2 cut(s)	829, 2544
Van91I	CCANNNNNTGG	1 cut(s)	2225
Vha464I	CTTAAG	1 cut(s)	2351
VpaK11BI	GGWCC	7 cut(s)	255, 325, 640, 732, 871, 1838, 1868
XagI	CCTNNNNNAGG	1 cut(s)	2354
XapI	RAATTY	5 cut(s)	1315, 1372, 1561, 1873, 2527
XceI	RCATGY	2 cut(s)	1763, 1831
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1878
XhoI	CTCGAG	1 cut(s)	199
XmaI	CCCGGG	1 cut(s)	649
XmaJI	CCTAGG	1 cut(s)	1651
XmiI	GTMKAC	2 cut(s)	923, 1291
XmnI	GAANNNNTTC	1 cut(s)	2668
XspI	CTAG	6 cut(s)	701, 1281, 1446, 1652, 1901, 2595
ZrmI	AGTACT	1 cut(s)	725
Zsp2I	ATGCAT	1 cut(s)	1428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.