RLG00000028086

S-locus glycoprotein domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0011114
Physical Location & Seq
Forward (+)
18474297 .. 18481389
7093 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028086

Sequence Viewer

Length: 4251 bp
ATGTCTTCTTCCATGGTTCCCATCTCTCTTCTTCTCCCCATACTCCAAACCCTAATTCTCATCTCCACAAACTCCAATCCCATTCCCAAAACTACTTCACCCCAAAACCCAACCCAGTTCTCCAACACCCTTCCATGTCCCACTCCAAACTCAAACGGGTCTTCAAGAACTGTCTCGAAGATTCTTTGGTACGCACCCTTGAGAACCAACAAGGTTGTACTCTATGGCAACTCCACCATTTGCAGTCGCAACAGGACCTTTCAGCTCGGCTTCTTCCCCTCTAACGGCGGCGCCTACTTGGCAATAATGTACTCCTCAATTCAGGTCCCCACCGTAGTCTGGGTCGCCAACCGCGACCGCCCCGTCAAGAATCTCACTTCAGCCAGACTCGAAATCACAGCCACCGACGGCCGGCTCGTCGTTCTAGACTCCGATAACTCGACTCTCTGGGCCAGCCAGAACACCGCCGCCGCCTCCGTCGGCGCCCAAGTCGTGCTCTTGGAGAGCGGCAATCTGGTGCTGCTCACCCACTCCGGGGAACTCGCGTGGCAGAGCTTCGATCACCCGGCTGACACGTGGCTCCCCGGCATGAATCTGACGGCGGAGCGGGGCCTGACCAGCTGGCGGAGCGCGGAGGACCCGTCGCCGGGTTTGTATTCGCTGCGGTTGCGCCCACAGGATTACGGTGAGTTTGAGCTAGTTTATAACGGTAGTGTGGAGTACTGGAGGACCGGGGTTTGGGACGGTCACGCTTTTGCTAATGTGCCGGAGATGATTGTTAAGTATATCTATACGTTTCACTTCATAGACCCGTACAAGCCGACGGCGTCGTTTTGGTTCACCGAGGGGCCGTTGGAGAGCGGGTTGGACCCGCCGCTGACCCGGTTCCAGATAGACCATTCGGGTCAGCTCCGGCAGTATACTTGGGGTTTAAGCGAGACCTGGGACAAGTTTTGGTACCAGCCTGAGGACAAGTGCAGAGTGTTTGGTTTGTGTGGGAGGTTTGGGGTTTGTGATAGCGAGACTGCCGAACCCTGTGAGTGTCCCTCAGGGTTTAAGCCTGTGGATGAGTCTGGTTGGGACTCTGGGGACTATTCCGGTGGGTGTGAGAGGTTTGGTGATGTGTCTTGTGAAGAAAGAGATGATGGTTTCGTGGAGGTTCGGGTTGAGAGTTTTGCGGAAAGTTGGCATAATAGTTCGATTACTGGTAGGGATGGTTGTGAAAAGAAGTGCTTGCAAGTTTGTTCTTGTATTGGTTTTCAGTACAATGAGAGGTCTGGTATGTGTAGACATTATTTCGGGTCTCTGTCGAATTTGAGGAATGTGAGCTCTGATGGTAATAGCAGTATGGATGCTGGTAGTGTTTTGAATTTGAAGGTACGAAAAGGTGTGATCTTGAAGAACAGGAAGGCTAAGGTTATGAATTATACAGTTTTTGGTGCTAGCATTGTTGGGTCGGTTGCGGTTTTGGGTTTTGTGGTGGTGGTTGTATTGATTAGGAGAAGAAGGATGAAGAGGAATGGAGGAGCAGAGGAAAGTGTTTTGCTGCCGGTGTTGAATTTGAAGGTATTTTCCTACAAAGAGCTTCAGACTGCAACCTGGGGTTTTAAAGAGAAACTCGGGCATGGTGGCTTTGGAGCAGTTTTCCTAGGGGAGCTATCAGACCGTACTCTTGTTGCAGTGAAACGCTTGGAGAGGCCAGGCAGCGGAGAGCAACAATTCCGAGCAGAAGTTTGCACCATTGGCAACATTCAGCATGTCAATCTTGTAAGACTTAGAGGCTTCTGCTCAGAAGGTTCTCATAGACTTCTGGTATATGATTACATGCCAAATGGTCCTCTAAGTGTGTATCTACGTCGAGACGGTCCAAATTTGAGCTGGGATGTTAGGTTTCGGCTAGCGGTTGGTACGGCAAGAGGCATTGCATATTTACATGAGGGGTGTAGAGATTCCATAATCCATTGTGATATCAAACCAGAAAACATTTTGCTTGATAGTGATTACACGGCAAAGGTGTCAGATTTTGGGTTAGCAAAGCTAATTCACAGAGACTTTAGTGGAGCATTAGCTGCTGATGGTAATCATGGCTATACCTATGGCTATGTAGCGCCAGAGTGCAGACCTGGTGATCCAATCACCACAAAAGCCGATGTTTACAGCTATGGAAAGACATTGATAGAATTACTTGGAGGCCATAGAATGTGGGAGGCACCTCCATCTGTAGGCGGCAGAGAGGGTGGAAATGAAATAACAGATTCTTGGTGCTTTCCTTCGTGGGCGGCACAGCAGATAATTGATGGCAATGTGGTGGCTGTAATTGATGATAGACTCGGGAGCAAGTATAACCTTAAGGAGGCAGAGCGTGTTGCATTAGTGGCGGTGTGGTGCATACAGGACGACGAGGCAACAAGGCCTACAATGGGGATGGTAGTGACAATGTTGGAAGGGGTTGTGGAAGTGACTGTTCCTCCAGCACCAAAGTTGTTACAAGCGCTGGTTTCAGGGGAGTCATTCTGTGGGGTGAATTCCGATTCTGGACACAGTCCATCGATTGCCAGCGACAACTTCTCTGGTTGTAATACGAAATTATCTAGTTGCGGTTCAGAGTCGTCACTTGGTACCCTGATAGGACATGAAGCAGTTAAGGCAGAGGAGAGTAGTAGACTATCCTCTCCTAGTCCTAGGTCTTCACCGAGGCAACGACATAGCCCGAAACAAAAATCAATGGATGCAGTTTCATCTATGGAAACTGCAGATCTCCACTCTGCTCCTACTACATTTATTGGGTCAAGTGATGGAGATTATCCGGTGATAAAAACCTTTAATGATGCCAAGACCATATGCTTTGTGGAGTCTCAAAAGCTTTGGGCCATTGCTGGTCCTATTGCCTTTAACATTTTGTGCAACTATGGTGTTAACTCCTTCACAAACATCTTTGTTGGGCATATTGGAAATTTGGAGCTCTCTGCTGTTGCAATTTCTCTGTCTGTCATTGCAAATTTCTCTTTTGGCTTTCTGCTTGGGATGGCAAGTGCACTTGAAACACTATGTGGGCAGGCATTTGGTGCTGGGCAAGTAGAAATGCTAGGAGTTTACATGCAACGATCATGGTTAATTCTGATAATCACATGCTTTGGTTTACTACCACTTTATGTGTTCGCGACGCCAATCCTAAAACTCCTTGGCCAAGAAGATGACATTGCAAACCTTGCCGGGAAGTTCTCTATCCAAACCATTCCTCAAATGTTTTCACTGGCCATCAATTTCCCAACTCAAAAGTTCTTGCAAGCACAGAGCAGGGTTTCGGTTCTGGCATGGATTGGTTTTGCAACTCTAATTCTACACATAGGAATCCTCTATGTCTTTATCGAATTGTTTGGGTGGGGAACGAGTGGTGCTGCTGCAGCCTATAATTTCTCGGCATGGGGGATGTCATTGGCTCAAGTCTTTTATATAGTTCGTTGGTGTACAGATGCTTGGAAGGGATTGTCATGGTTAGCCTTCAAGGAATTATGGTCCTTTGCAAAACTCTCCCTTGCTTCAGCTGTAATGCTTTGCCTAGAGATTTGGTACTTCATGACCATAATTGTTCTCACCGGACACCTTGATGATCCTGTTATTGCAGTTGGCTCCCTTTCAATATGCATGAATCTGAATGGTTGGGAAGGCATGTTGTTTATTGGGATCAATGCAGCAATAAGCGTTCGAGTCTCCAATGAGCTTGGATCAGCACATCCGAGAGCTGCAAAATACTCCGTCATTATCACGATCATTGAGTCTCTCATCATTGGGATCTTTTTCGGGGGGATTATCTTGGCGGCCAAAGACCACTTTGCCATCATCTTTACTGAGAGCAAAGAGATGCAACAAGCAGTTTCTCGTTTAGCTTTCCTTCTCAGTATTACAATGATACTCAATAGTGTTCAGCCGGTTATTTCAGGTGTTGCTGTTGGAGGAGGGTGGCAAGCTTTGGTGGCTTACATAAACTTGTTTAGTTATTATATTGTTGGTCTACCTCTTGGGTTCCTTCTTGGTTATAAAACAAGGATGAGAGTGGAGGGAATTTGGATTGGTATGATATTCGGGACATCCTTGCAAACACTGATCCTCTTGTGCATTGTTTACAAAACCAACTGGAACAACGAGGTAGAACAAGCCTCGGAAAGAATGAGGCAGTGGACTGGAGAAGAACTAGTGGCCGTTGATAACCAAAAAAAGAGTGGACAAGAAGGTGGACCTCTAATATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B_lectin MatE Pkinase S_locus_glycop

Protein Analysis

1417

Amino Acids

155.36

Weight (kDa)

6.01

Isoelectric Point (pI)

38.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 111 - 202 4e-27 D-mannose binding lectin
S_locus_glycop PF00954 242 - 354 2e-21 S-locus glycoprotein domain
Pkinase PF00069 536 - 810 3.2e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 536 - 812 4.3e-39 Protein tyrosine and serine/threonine kinase
MatE PF01554 961 - 1121 2e-30 MatE
MatE PF01554 1181 - 1343 3.3e-24 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 705, 4038
AasI GACNNNNNNGTC 1 cut(s) 362
Acc65I GGTACC 2 cut(s) 957, 2618
AccB1I GGYRCC 5 cut(s) 290, 482, 957, 2209, 2618
AccBSI CCGCTC 3 cut(s) 507, 607, 861
AccI GTMKAC 4 cut(s) 920, 1288, 2662, 4012
AccII CGCG 4 cut(s) 354, 545, 632, 3161
AclWI GGATC 6 cut(s) 2123, 3605, 3692, 3733, 3800, 4099
AcoI YGGCCR 5 cut(s) 409, 3184, 3255, 3819, 4197
AcsI RAATTY 8 cut(s) 1312, 1369, 1558, 1870, 2524, 2953, 2998, 4062
AcuI CTGAAG 3 cut(s) 363, 1571, 3525
AcvI CACGTG 1 cut(s) 576
AcyI GRCGYC 4 cut(s) 291, 483, 827, 3164
AdeI CACNNNGTG 1 cut(s) 3050
AfeI AGCGCT 1 cut(s) 2493
AflII CTTAAG 1 cut(s) 2348
AflIII ACRYGT 1 cut(s) 573
AgsI TTSAA 9 cut(s) 165, 1369, 1375, 1399, 1558, 1564, 3041, 3505, 3639
AhlI ACTAGT 1 cut(s) 4192
AjnI CCWGG 4 cut(s) 941, 1598, 1699, 2122
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
Alw21I GWGCWC 4 cut(s) 498, 1331, 2964, 3037
Alw26I GTCTC 9 cut(s) 178, 932, 1016, 1308, 1854, 2043, 2859, 3715, 3783
Alw44I GTGCAC 1 cut(s) 3033
AlwI GGATC 6 cut(s) 2123, 3605, 3692, 3733, 3800, 4099
Ama87I CYCGRG 2 cut(s) 1619, 2330
Aor51HI AGCGCT 1 cut(s) 2493
ApaLI GTGCAC 1 cut(s) 3033
ApoI RAATTY 8 cut(s) 1312, 1369, 1558, 1870, 2524, 2953, 2998, 4062
Asp718I GGTACC 2 cut(s) 957, 2618
AspA2I CCTAGG 2 cut(s) 1648, 2681
AspLEI GCGC 6 cut(s) 293, 485, 632, 672, 2110, 2494
AsuC2I CCSGG 7 cut(s) 535, 566, 585, 648, 733, 883, 3214
AsuNHI GCTAGC 2 cut(s) 1442, 1897
AvaI CYCGRG 2 cut(s) 1619, 2330
AvrII CCTAGG 2 cut(s) 1648, 2681
AxyI CCTNAGG 2 cut(s) 966, 1048
BaeGI GKGCMC 1 cut(s) 3037
BalI TGGCCA 2 cut(s) 3186, 3257
BanI GGYRCC 5 cut(s) 290, 482, 957, 2209, 2618
BanII GRGCYC 2 cut(s) 1331, 2964
BbrPI CACGTG 1 cut(s) 576
BbsI GAAGAC 2 cut(s) 153, 2679
Bbv12I GWGCWC 4 cut(s) 498, 1331, 2964, 3037
BceAI ACGGC 8 cut(s) 301, 424, 615, 835, 840, 1926, 2022, 4184
BciT130I CCWGG 4 cut(s) 943, 1600, 1701, 2124
BcnI CCSGG 7 cut(s) 535, 566, 585, 648, 733, 883, 3214
BcoDI GTCTC 9 cut(s) 178, 932, 1016, 1308, 1854, 2043, 2859, 3715, 3783
BcuI ACTAGT 1 cut(s) 4192
BfmI CTRYAG 3 cut(s) 2220, 2751, 3402
BfoI RGCGCY 4 cut(s) 294, 486, 2111, 2495
BfrI CTTAAG 1 cut(s) 2348
BglI GCCNNNNNGGC 1 cut(s) 299
BglII AGATCT 1 cut(s) 2755
BlnI CCTAGG 2 cut(s) 1648, 2681
BmcAI AGTACT 1 cut(s) 722
BmeT110I CYCGRG 2 cut(s) 1619, 2330
BmrI ACTGGG 1 cut(s) 109
BmsI GCATC 5 cut(s) 1342, 2719, 2818, 3463, 3852
BmtI GCTAGC 2 cut(s) 1446, 1901
BmuI ACTGGG 1 cut(s) 109
BpiI GAAGAC 2 cut(s) 153, 2679
BplI GAGNNNNNCTC 2 cut(s) 1031, 1063
BpmI CTGGAG 3 cut(s) 745, 2454, 4203
Bpu10I CCTNAGC 1 cut(s) 1413
BpuEI CTTGAG 2 cut(s) 220, 3426
BpuMI CCSGG 7 cut(s) 535, 566, 585, 648, 733, 883, 3214
Bsa29I ATCGAT 1 cut(s) 2549
BsaAI YACGTR 1 cut(s) 576
BsaBI GATNNNNATC 1 cut(s) 2079
BsaHI GRCGYC 4 cut(s) 291, 483, 827, 3164
BsaI GGTCTC 2 cut(s) 932, 1308
BsaWI WCCGGW 3 cut(s) 1097, 2806, 3596
BsaXI ACNNNNNCTCC 6 cut(s) 626, 656, 848, 878, 2452, 2482
Bse118I RCCGGY 3 cut(s) 411, 1549, 3928
Bse1I ACTGG 6 cut(s) 115, 728, 1210, 3258, 4139, 4186
Bse21I CCTNAGG 2 cut(s) 966, 1048
Bse3DI GCAATG 5 cut(s) 1920, 2308, 2871, 2991, 3198
Bse8I GATNNNNATC 1 cut(s) 2079
BseBI CCWGG 4 cut(s) 943, 1600, 1701, 2124
BseCI ATCGAT 1 cut(s) 2549
BseJI GATNNNNATC 1 cut(s) 2079
BseMI GCAATG 5 cut(s) 1920, 2308, 2871, 2991, 3198
BseMII CTCAG 5 cut(s) 957, 1062, 1803, 3840, 3910
BseNI ACTGG 6 cut(s) 115, 728, 1210, 3258, 4139, 4186
BseRI GAGGAG 4 cut(s) 304, 1539, 2666, 3969
BseSI GKGCMC 1 cut(s) 3037
BseX3I CGGCCG 1 cut(s) 409
BseYI CCCAGC 2 cut(s) 1878, 3068
BsgI GTGCAG 2 cut(s) 997, 2137
Bsh1236I CGCG 4 cut(s) 354, 545, 632, 3161
Bsh1285I CGRYCG 2 cut(s) 358, 412
BshNI GGYRCC 5 cut(s) 290, 482, 957, 2209, 2618
BshVI ATCGAT 1 cut(s) 2549
BsiEI CGRYCG 2 cut(s) 358, 412
BsiHKAI GWGCWC 4 cut(s) 498, 1331, 2964, 3037
BsiHKCI CYCGRG 2 cut(s) 1619, 2330
BslFI GGGAC 8 cut(s) 123, 311, 755, 959, 1029, 1094, 1103, 4099
BsmAI GTCTC 9 cut(s) 178, 932, 1016, 1308, 1854, 2043, 2859, 3715, 3783
BsmBI CGTCTC 1 cut(s) 1854
BsmFI GGGAC 8 cut(s) 123, 311, 755, 959, 1029, 1094, 1103, 4099
Bso31I GGTCTC 2 cut(s) 932, 1308
BsoBI CYCGRG 2 cut(s) 1619, 2330
Bsp1286I GDGCHC 4 cut(s) 498, 1331, 2964, 3037
Bsp1407I TGTACA 1 cut(s) 3467
Bsp19I CCATGG 1 cut(s) 12
Bsp68I TCGCGA 1 cut(s) 3161
BspCNI CTCAG 5 cut(s) 958, 1061, 1802, 3841, 3909
BspDI ATCGAT 1 cut(s) 2549
BspFNI CGCG 4 cut(s) 354, 545, 632, 3161
BspHI TCATGA 1 cut(s) 3576
BspMAI CTGCAG 2 cut(s) 2755, 3406
BspOI GCTAGC 2 cut(s) 1446, 1901
BspPI GGATC 6 cut(s) 2123, 3605, 3692, 3733, 3800, 4099
BspT107I GGYRCC 5 cut(s) 290, 482, 957, 2209, 2618
BspTI CTTAAG 1 cut(s) 2348
BspTNI GGTCTC 2 cut(s) 932, 1308
BsrBI CCGCTC 3 cut(s) 507, 607, 861
BsrDI GCAATG 5 cut(s) 1920, 2308, 2871, 2991, 3198
BsrFI RCCGGY 3 cut(s) 411, 1549, 3928
BsrGI TGTACA 1 cut(s) 3467
BsrI ACTGG 6 cut(s) 115, 728, 1210, 3258, 4139, 4186
BssAI RCCGGY 3 cut(s) 411, 1549, 3928
BssNAI GTATAC 1 cut(s) 921
BssNI GRCGYC 4 cut(s) 291, 483, 827, 3164
BssT1I CCWWGG 4 cut(s) 12, 1648, 2681, 3181
Bst1107I GTATAC 1 cut(s) 921
Bst2UI CCWGG 4 cut(s) 943, 1600, 1701, 2124
Bst6I CTCTTC 2 cut(s) 33, 1508
BstACI GRCGYC 4 cut(s) 291, 483, 827, 3164
BstAFI CTTAAG 1 cut(s) 2348
BstAPI GCANNNNNTGC 3 cut(s) 2069, 3065, 3209
BstAUI TGTACA 1 cut(s) 3467
BstBAI YACGTR 1 cut(s) 576
BstDEI CTNAG 8 cut(s) 966, 1048, 1413, 1775, 1789, 1841, 3849, 3896
BstDSI CCRYGG 1 cut(s) 12
BstENI CCTNNNNNAGG 1 cut(s) 2351
BstFNI CGCG 4 cut(s) 354, 545, 632, 3161
BstH2I RGCGCY 4 cut(s) 294, 486, 2111, 2495
BstHHI GCGC 6 cut(s) 293, 485, 632, 672, 2110, 2494
BstMAI GTCTC 9 cut(s) 178, 932, 1016, 1308, 1854, 2043, 2859, 3715, 3783
BstMCI CGRYCG 2 cut(s) 358, 412
BstNI CCWGG 4 cut(s) 943, 1600, 1701, 2124
BstNSI RCATGY 5 cut(s) 1760, 1828, 3100, 3132, 3673
BstSFI CTRYAG 3 cut(s) 2220, 2751, 3402
BstSLI GKGCMC 1 cut(s) 3037
BstUI CGCG 4 cut(s) 354, 545, 632, 3161
BstV2I GAAGAC 2 cut(s) 153, 2679
BstX2I RGATCY 2 cut(s) 2755, 3792
BstYI RGATCY 2 cut(s) 2755, 3792
BstZ17I GTATAC 1 cut(s) 921
BstZI CGGCCG 1 cut(s) 409
Bsu15I ATCGAT 1 cut(s) 2549
Bsu36I CCTNAGG 2 cut(s) 966, 1048
BsuTUI ATCGAT 1 cut(s) 2549
BtgI CCRYGG 1 cut(s) 12
BtsI GCAGTG 2 cut(s) 1686, 4181
BtsIMutI CAGTG 4 cut(s) 1686, 3251, 4100, 4181
BtuMI TCGCGA 1 cut(s) 3161
CciI TCATGA 1 cut(s) 3576
CfoI GCGC 6 cut(s) 293, 485, 632, 672, 2110, 2494
Cfr10I RCCGGY 3 cut(s) 411, 1549, 3928
ClaI ATCGAT 1 cut(s) 2549
CseI GACGC 2 cut(s) 816, 3172
CsiI ACCWGGT 1 cut(s) 2122
DdeI CTNAG 8 cut(s) 966, 1048, 1413, 1775, 1789, 1841, 3849, 3896
DinI GGCGCC 2 cut(s) 292, 484
DraI TTTAAA 1 cut(s) 1609
DraIII CACNNNGTG 1 cut(s) 3050
DrdI GACNNNNNNGTC 1 cut(s) 362
DseDI GACNNNNNNGTC 1 cut(s) 362
EaeI YGGCCR 5 cut(s) 409, 3184, 3255, 3819, 4197
EagI CGGCCG 1 cut(s) 409
Eam1104I CTCTTC 2 cut(s) 33, 1508
EarI CTCTTC 2 cut(s) 33, 1508
EciI GGCGGA 2 cut(s) 617, 640
Ecl136II GAGCTC 2 cut(s) 1329, 2962
EclXI CGGCCG 1 cut(s) 409
Eco130I CCWWGG 4 cut(s) 12, 1648, 2681, 3181
Eco147I AGGCCT 1 cut(s) 2413
Eco24I GRGCYC 2 cut(s) 1331, 2964
Eco31I GGTCTC 2 cut(s) 932, 1308
Eco32I GATATC 1 cut(s) 1969
Eco47III AGCGCT 1 cut(s) 2493
Eco52I CGGCCG 1 cut(s) 409
Eco53kI GAGCTC 2 cut(s) 1329, 2962
Eco57I CTGAAG 3 cut(s) 363, 1571, 3525
Eco72I CACGTG 1 cut(s) 576
Eco81I CCTNAGG 2 cut(s) 966, 1048
Eco88I CYCGRG 2 cut(s) 1619, 2330
EcoICRI GAGCTC 2 cut(s) 1329, 2962
EcoNI CCTNNNNNAGG 1 cut(s) 2351
EcoO109I RGGNCCY 4 cut(s) 255, 325, 610, 637
EcoRI GAATTC 1 cut(s) 2524
EcoRII CCWGG 4 cut(s) 941, 1598, 1699, 2122
EcoRV GATATC 1 cut(s) 1969
EcoT14I CCWWGG 4 cut(s) 12, 1648, 2681, 3181
EcoT22I ATGCAT 1 cut(s) 3647
EcoT38I GRGCYC 2 cut(s) 1331, 2964
EgeI GGCGCC 2 cut(s) 292, 484
EheI GGCGCC 2 cut(s) 292, 484
ErhI CCWWGG 4 cut(s) 12, 1648, 2681, 3181
Esp3I CGTCTC 1 cut(s) 1854
FalI AAGNNNNNCTT 2 cut(s) 1217, 1249
FaqI GGGAC 8 cut(s) 123, 311, 755, 959, 1029, 1094, 1103, 4099
FauI CCCGC 3 cut(s) 600, 854, 879
FauNDI CATATG 1 cut(s) 2840
FblI GTMKAC 4 cut(s) 920, 1288, 2662, 4012
FriOI GRGCYC 2 cut(s) 1331, 2964
GlaI GCGC 6 cut(s) 292, 484, 631, 671, 2109, 2493
GsaI CCCAGC 2 cut(s) 1882, 3072
GsuI CTGGAG 3 cut(s) 745, 2454, 4203
HaeII RGCGCY 4 cut(s) 294, 486, 2111, 2495
HgaI GACGC 2 cut(s) 816, 3172
HhaI GCGC 6 cut(s) 293, 485, 632, 672, 2110, 2494
Hin1I GRCGYC 4 cut(s) 291, 483, 827, 3164
Hin6I GCGC 6 cut(s) 291, 483, 630, 670, 2108, 2492
HinP1I GCGC 6 cut(s) 291, 483, 630, 670, 2108, 2492
HincII GTYRAC 1 cut(s) 2917
HindII GTYRAC 1 cut(s) 2917
HindIII AAGCTT 2 cut(s) 2861, 3966
HpaI GTTAAC 1 cut(s) 2917
Hpy99I CGWCG 9 cut(s) 410, 422, 482, 646, 826, 832, 1860, 2402, 3166
HpyCH4IV ACGT 3 cut(s) 575, 794, 1855
HpyF3I CTNAG 8 cut(s) 966, 1048, 1413, 1775, 1789, 1841, 3849, 3896
HpySE526I ACGT 3 cut(s) 575, 794, 1855
Hsp92I GRCGYC 4 cut(s) 291, 483, 827, 3164
HspAI GCGC 6 cut(s) 291, 483, 630, 670, 2108, 2492
KasI GGCGCC 2 cut(s) 290, 482
KpnI GGTACC 2 cut(s) 961, 2622
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
KspAI GTTAAC 1 cut(s) 2917
LweI GCATC 5 cut(s) 1342, 2719, 2818, 3463, 3852
MabI ACCWGGT 1 cut(s) 2122
MaeII ACGT 3 cut(s) 575, 794, 1855
MaeIII GTNAC 5 cut(s) 746, 2431, 2458, 2484, 2610
MbiI CCGCTC 3 cut(s) 507, 607, 861
MflI RGATCY 2 cut(s) 2755, 3792
MhlI GDGCHC 4 cut(s) 498, 1331, 2964, 3037
MlsI TGGCCA 2 cut(s) 3186, 3257
MluNI TGGCCA 2 cut(s) 3186, 3257
Mly113I GGCGCC 2 cut(s) 291, 483
MmeI TCCRAC 5 cut(s) 147, 834, 846, 2421, 3931
Mox20I TGGCCA 2 cut(s) 3186, 3257
Mph1103I ATGCAT 1 cut(s) 3647
MroNI GCCGGC 1 cut(s) 411
MscI TGGCCA 2 cut(s) 3186, 3257
MslI CAYNNNNRTG 1 cut(s) 3606
Msp20I TGGCCA 2 cut(s) 3186, 3257
MspA1I CMGCKG 4 cut(s) 621, 877, 1707, 3545
MspCI CTTAAG 1 cut(s) 2348
MvaI CCWGG 4 cut(s) 943, 1600, 1701, 2124
MvnI CGCG 4 cut(s) 354, 545, 632, 3161
NaeI GCCGGC 1 cut(s) 413
NarI GGCGCC 2 cut(s) 291, 483
NciI CCSGG 7 cut(s) 535, 566, 585, 648, 733, 883, 3214
NcoI CCATGG 1 cut(s) 12
NdeI CATATG 1 cut(s) 2840
NgoMIV GCCGGC 1 cut(s) 411
NheI GCTAGC 2 cut(s) 1442, 1897
NmeAIII GCCGAG 2 cut(s) 246, 3398
NmuCI GTSAC 4 cut(s) 746, 2431, 2458, 2610
NruI TCGCGA 1 cut(s) 3161
NsiI ATGCAT 1 cut(s) 3647
NspI RCATGY 5 cut(s) 1760, 1828, 3100, 3132, 3673
PagI TCATGA 1 cut(s) 3576
PceI AGGCCT 1 cut(s) 2413
PcsI WCGNNNNNNNCGW 2 cut(s) 351, 414
PdiI GCCGGC 1 cut(s) 413
PfeI GAWTC 8 cut(s) 181, 370, 592, 1949, 2255, 2531, 3351, 3649
PflFI GACNNNGTC 2 cut(s) 826, 2541
PluTI GGCGCC 2 cut(s) 294, 486
PmaCI CACGTG 1 cut(s) 576
PmlI CACGTG 1 cut(s) 576
Ppu21I YACGTR 1 cut(s) 576
PpuMI RGGWCCY 3 cut(s) 255, 325, 637
PsiI TTATAA 2 cut(s) 705, 4038
Psp124BI GAGCTC 2 cut(s) 1331, 2964
Psp5II RGGWCCY 3 cut(s) 255, 325, 637
Psp6I CCWGG 4 cut(s) 941, 1598, 1699, 2122
PspCI CACGTG 1 cut(s) 576
PspFI CCCAGC 2 cut(s) 1878, 3068
PspGI CCWGG 4 cut(s) 941, 1598, 1699, 2122
PspPPI RGGWCCY 3 cut(s) 255, 325, 637
PstI CTGCAG 2 cut(s) 2755, 3406
PsuI RGATCY 2 cut(s) 2755, 3792
PsyI GACNNNGTC 2 cut(s) 826, 2541
PvuII CAGCTG 2 cut(s) 621, 3545
RruI TCGCGA 1 cut(s) 3161
RseI CAYNNNNRTG 1 cut(s) 3606
SacI GAGCTC 2 cut(s) 1331, 2964
ScaI AGTACT 1 cut(s) 722
SduI GDGCHC 4 cut(s) 498, 1331, 2964, 3037
SexAI ACCWGGT 1 cut(s) 2122
SfaNI GCATC 5 cut(s) 1342, 2719, 2818, 3463, 3852
SfcI CTRYAG 3 cut(s) 2220, 2751, 3402
SfoI GGCGCC 2 cut(s) 292, 484
SmiMI CAYNNNNRTG 1 cut(s) 3606
SmlI CTYRAG 3 cut(s) 199, 2348, 3441
SmoI CTYRAG 3 cut(s) 199, 2348, 3441
SpeI ACTAGT 1 cut(s) 4192
SseBI AGGCCT 1 cut(s) 2413
SspDI GGCGCC 2 cut(s) 290, 482
SspI AATATT 1 cut(s) 4245
SstI GAGCTC 2 cut(s) 1331, 2964
StuI AGGCCT 1 cut(s) 2413
StyI CCWWGG 4 cut(s) 12, 1648, 2681, 3181
TaiI ACGT 3 cut(s) 578, 797, 1858
TatI WGTACW 5 cut(s) 217, 309, 720, 1263, 3467
TauI GCSGC 8 cut(s) 291, 470, 473, 510, 877, 2229, 2282, 3821
TfiI GAWTC 8 cut(s) 181, 370, 592, 1949, 2255, 2531, 3351, 3649
TscAI CASTG 4 cut(s) 1686, 3258, 4107, 4181
TseFI GTSAC 4 cut(s) 746, 2431, 2458, 2610
Tsp45I GTSAC 4 cut(s) 746, 2431, 2458, 2610
TspDTI ATGAA 9 cut(s) 605, 793, 1436, 1526, 2259, 2649, 2727, 3565, 3662
TspGWI ACGGA 2 cut(s) 466, 3745
TspRI CASTG 4 cut(s) 1686, 3258, 4107, 4181
Tth111I GACNNNGTC 2 cut(s) 826, 2541
Vha464I CTTAAG 1 cut(s) 2348
VneI GTGCAC 1 cut(s) 3033
XagI CCTNNNNNAGG 1 cut(s) 2351
XapI RAATTY 8 cut(s) 1312, 1369, 1558, 1870, 2524, 2953, 2998, 4062
XbaI TCTAGA 1 cut(s) 424
XceI RCATGY 5 cut(s) 1760, 1828, 3100, 3132, 3673
XcmI CCANNNNNNNNNTGG 3 cut(s) 1875, 2845, 4217
XmaJI CCTAGG 2 cut(s) 1648, 2681
XmiI GTMKAC 4 cut(s) 920, 1288, 2662, 4012
ZrmI AGTACT 1 cut(s) 722
Zsp2I ATGCAT 1 cut(s) 3647
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.