Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001902

Physical Location & Seq

Genomic Coordinates Forward (+)

50666074 .. 50669442

Gene Structure 3369 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ58365

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGAAGGATTTGAACAATACGGATCTGTTCGACCCGAGGACCACGGTGATGGAGTCGGAGTTCGTCGGCACGGTCACGCCGTCGACCGACGCCGATTTCGCCTTCGCCTTCAACGACAGTAACTTCTCCGACCGGTTGCTCCGGATCGAGATCATGGGCGACACCCCCGAGTCCAGGCCCGATTCCGAGGCCTGCACCAGTATCGCCGATTGGGCCCGCCACCGCAAGCGCCGGCGGGAGGATTTCAAGAAGGACGCCGGCGTTGTGGAGCTCTCTGAATGTCCGGAGGAGCAGATCTTGAATGACAATCAACCTGATATGGATGATGAAGCCTGTGAAAACCAAGATGAAGATGCGGTTGCTATGGTTGAAGAATCACCTTCAGGAGATGAGGGTGCAAACAGCGTTGACTCGGACTGGGGAATGGATTGTTCTACAGTTGTGAGAATCAAAACATTACACATCAGTTCTCCAATTCTGGCAGCAAAGAGTCCGTTTTTCTATAAGCTCTTTTCAAATGGGATGAGGGAATCTGAACAGCGACACGTGACCTTGAGAATCAATGCCTCAGAAGAAGCTGCCCTGATGGAGCTCCTTAATTTCATGTACAGTAGTACCTTAAACACGACCACAGCTCCTGGGTTGCTTGATGTGCTGATGGCTGCTGACAAGTTTGAGGTTGCTTCGTGCATGAGACATTGCAGCCGGCTGTTGCGGAATATTCCCATGACACCGGAGTCTGCTTTGCTTTATCTAGAGCTTCCTTCCAGTGTCCTAATGGCTGAAGCAGTCCAGGCATTGACTGATGCAGCAAAGCAGTACCTTGCTGCTCGTTATAAGGACATAAGCAAGTTTATAGATGAGGTGATGGCCTTACCCCTAGCTGGAATCGAGGCAATTGTTTCGAGTGATGATCTCCAAGTTGCATCAGAGGATGCTGTATATGACTTTGTCTTGAAATGGTCGAGGACTCACTACCCAAAACTGGAGGAAAGGCGAGAAATCTTGGGTTCTCGACTTGCACGCTACATTCGCTTCCCTTACATGACTTGTCGAAAGCTAAAGAAAGTCTTGACATGTAATGATTTTGACCATGAAGCTGCATCCAAGCTTGTGCTTGAGGCTCTCTTCTTCAAGGCTGAGGCCCCACATCGGCAGCGAATCCTTGCAGCAGAGGAGTCTGCTACCCTGAATCGACGCTTTGTGGAACGGGCATACAAGTATCGCCCGGTTAAGGTGGTGGAATTTGACCTTCCCAGGCAGCAGTGTGTGGTGTACCTGGACCTGAAGCGCGAGGAGTGTGCAAATTTATTCCCATCTGGACGGGTGTATTCACAGGCATTCCACTTGGGTGGACAAGGGTTCTTCCTCTCTGCGCATTGCAACATGGACCAGCAGAGTTCTTTCCATTGTTTTGGGCTGTTTTTGGGGATGCAGGAGAAGGGGTCAGTGAGTTTTGCAGTGGACTACGAGTTTGCGGCAAGATCAAAGCCAACGGAGGAATTTATTAGCAAATACAAAGGCAACTACACTTTTACTGGGGGAAAGGCGGTTGGCTACAGAAACTTATTTGCCATACCATGGAATAACTTCATTGCTGATGATAGTCTCTACTTCATCAATGGTGTACTCCATCTTAGAGCGGAGCTTACTATCAGGCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0010114 GO:0031461 GO:0031463 GO:0032991 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046982 GO:0046983 GO:0050896 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BACK BTB

Protein Analysis

554

Amino Acids

62.82

Weight (kDa)

5.14

Isoelectric Point (pI)

50.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BTB	PF00651	142 - 239	4.2e-15	BTB/POZ domain
BTB_KLHL33	PF21536	170 - 234	1.1e-13	Kelch-like protein 33-like, BTB/POZ domain
BACK	PF07707	264 - 357	2.7e-09	BTB And C-terminal Kelch

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001902)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46260 AT3G61600 AT3G61600
fragaria_vesca	FvH4_5g03751 FvH4_5g03751 FvH4_5g03751 FvH4_5g03751 FvH4_5g03751 FvH4_7g15752 FvH4_7g15752
malus_domestica	MD01G1074300.v1.1 MD07G1143200.v1.1 MD14G1117700.v1.1
prunus_persica	Prupe.2G182300_v2.0.a1 Prupe.2G182300_v2.0.a1 Prupe.5G112100_v2.0.a1 Prupe.5G112100_v2.0.a1 Prupe.5G112100_v2.0.a1
pyrus_communis	pycom06g09390 pycom07g14190
rosa_chinensis	RchiOBHm_Chr1g0358521 RchiOBHm_Chr7g0195841
rosa_laevigata	RLG00000004083 RLG00000027955
rosa_multiflora	Rmu_co8444369.1_g000001 Rmu_sc0001609.1_g000004 Rmu_sc0004016.1_g000020
rosa_roxburghii	Rroxscaffold_3G00260050 Rroxscaffold_4G00297840
rosa_rugosa	Rorug01G0262200 Rorug01G0262300 Rorug07G0026800 Rorug07G0026900 Rorug07G0027000 Rorug07G0027000 Rorug07G0027100
rosa_samantha	Rh1AG276900 Rh1BG243300 Rh1CG260500 Rh1DG271600 Rh7AG154600 Rh7BG156400 Rh7CG160100 Rh7DG155600
rosa_wichuraiana	Rw1G024620 Rw7G013210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	837
AasI	GACNNNNNNGTC	1 cut(s)	736
Acc16I	TGCGCA	1 cut(s)	1377
AccB7I	CCANNNNNTGG	1 cut(s)	1581
AccBSI	CCGCTC	1 cut(s)	1643
AccI	GTMKAC	1 cut(s)	83
AccII	CGCG	1 cut(s)	1293
AccIII	TCCGGA	2 cut(s)	141, 283
AciI	CCGC	8 cut(s)	217, 223, 235, 356, 715, 1478, 1550, 1643
AclWI	GGATC	2 cut(s)	30, 152
AcsI	RAATTY	3 cut(s)	1244, 1306, 1502
AcuI	CTGAAG	3 cut(s)	366, 804, 1307
AcvI	CACGTG	1 cut(s)	547
AcyI	GRCGYC	2 cut(s)	90, 255
AfaI	GTAC	5 cut(s)	608, 616, 821, 1277, 1629
AfiI	CCNNNNNNNGG	7 cut(s)	174, 238, 884, 985, 1152, 1234, 1581
AflIII	ACRYGT	2 cut(s)	544, 1076
AgeI	ACCGGT	1 cut(s)	132
AgsI	TTSAA	8 cut(s)	13, 112, 247, 301, 371, 516, 958, 1135
AjnI	CCWGG	5 cut(s)	173, 637, 792, 1256, 1278
AleI	CACNNNNGTG	1 cut(s)	1350
AloI	GAACNNNNNNTCC	2 cut(s)	44, 76
Alw21I	GWGCWC	2 cut(s)	273, 594
Alw26I	GTCTC	2 cut(s)	688, 1613
AlwI	GGATC	2 cut(s)	30, 152
AlwNI	CAGNNNCTG	2 cut(s)	638, 1662
Ama87I	CYCGRG	2 cut(s)	34, 167
Aor13HI	TCCGGA	2 cut(s)	141, 283
AoxI	GGCC	5 cut(s)	176, 189, 213, 870, 1143
ApaI	GGGCCC	1 cut(s)	217
ApoI	RAATTY	3 cut(s)	1244, 1306, 1502
ArsI	GACNNNNNNTTYG	4 cut(s)	80, 112, 1457, 1489
AsiGI	ACCGGT	1 cut(s)	132
Asp700I	GAANNNNTTC	1 cut(s)	1589
AspLEI	GCGC	3 cut(s)	231, 1293, 1378
AspS9I	GGNCC	7 cut(s)	39, 177, 213, 214, 1144, 1282, 1390
AsuC2I	CCSGG	1 cut(s)	1229
AsuHPI	GGTGA	3 cut(s)	58, 369, 877
AvaI	CYCGRG	2 cut(s)	34, 167
AvaII	GGWCC	3 cut(s)	39, 1282, 1390
BaeGI	GKGCMC	1 cut(s)	217
BaeI	ACNNNNGTAYC	2 cut(s)	598, 631
BanII	GRGCYC	3 cut(s)	217, 273, 594
BbrPI	CACGTG	1 cut(s)	547
Bbv12I	GWGCWC	2 cut(s)	273, 594
BbvCI	CCTCAGC	1 cut(s)	1140
BccI	CCATC	6 cut(s)	43, 580, 652, 862, 1324, 1641
BceAI	ACGGC	1 cut(s)	64
BcgI	CGANNNNNNTGC	6 cut(s)	184, 218, 885, 919, 1283, 1317
BciT130I	CCWGG	5 cut(s)	175, 639, 794, 1258, 1280
BcnI	CCSGG	1 cut(s)	1229
BcoDI	GTCTC	2 cut(s)	688, 1613
BfaI	CTAG	2 cut(s)	755, 881
BfmI	CTRYAG	2 cut(s)	435, 1558
BfoI	RGCGCY	1 cut(s)	232
BglI	GCCNNNNNGGC	1 cut(s)	212
BglII	AGATCT	1 cut(s)	294
Bme1390I	CCNGG	6 cut(s)	175, 639, 794, 1229, 1258, 1280
Bme18I	GGWCC	3 cut(s)	39, 1282, 1390
BmeT110I	CYCGRG	2 cut(s)	34, 167
BmgT120I	GGNCC	7 cut(s)	39, 177, 213, 214, 1144, 1282, 1390
BmiI	GGNNCC	2 cut(s)	215, 1146
BmrFI	CCNGG	6 cut(s)	175, 639, 794, 1229, 1258, 1280
BmrI	ACTGGG	2 cut(s)	427, 1548
BmsI	GCATC	6 cut(s)	343, 796, 925, 935, 1112, 1422
BmuI	ACTGGG	2 cut(s)	427, 1548
BpmI	CTGGAG	1 cut(s)	1007
Bpu10I	CCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	2 cut(s)	574, 1139
BpuMI	CCSGG	1 cut(s)	1229
BsaAI	YACGTR	1 cut(s)	547
BsaBI	GATNNNNATC	1 cut(s)	149
BsaHI	GRCGYC	2 cut(s)	90, 255
BsaJI	CCNNGG	6 cut(s)	35, 42, 186, 638, 1256, 1580
BsaWI	WCCGGW	4 cut(s)	132, 141, 283, 733
BsaXI	ACNNNNNCTCC	6 cut(s)	44, 74, 619, 649, 1430, 1460
Bsc4I	CCNNNNNNNGG	7 cut(s)	174, 238, 884, 985, 1152, 1234, 1581
Bse118I	RCCGGY	4 cut(s)	132, 231, 257, 705
Bse1I	ACTGG	5 cut(s)	198, 422, 768, 990, 1543
Bse3DI	GCAATG	3 cut(s)	697, 1378, 1593
Bse8I	GATNNNNATC	1 cut(s)	149
BseAI	TCCGGA	2 cut(s)	141, 283
BseBI	CCWGG	5 cut(s)	175, 639, 794, 1258, 1280
BseDI	CCNNGG	6 cut(s)	35, 42, 186, 638, 1256, 1580
BseGI	GGATG	5 cut(s)	328, 528, 940, 1103, 1437
BseJI	GATNNNNATC	1 cut(s)	149
BseLI	CCNNNNNNNGG	7 cut(s)	174, 238, 884, 985, 1152, 1234, 1581
BseMI	GCAATG	3 cut(s)	697, 1378, 1593
BseMII	CTCAG	2 cut(s)	582, 1131
BseNI	ACTGG	5 cut(s)	198, 422, 768, 990, 1543
BseRI	GAGGAG	3 cut(s)	302, 1190, 1310
BseSI	GKGCMC	1 cut(s)	217
BsgI	GTGCAG	1 cut(s)	178
Bsh1236I	CGCG	1 cut(s)	1293
Bsh1285I	CGRYCG	2 cut(s)	87, 133
BshFI	GGCC	5 cut(s)	178, 191, 215, 872, 1145
BshTI	ACCGGT	1 cut(s)	132
BsiEI	CGRYCG	2 cut(s)	87, 133
BsiHKAI	GWGCWC	2 cut(s)	273, 594
BsiHKCI	CYCGRG	2 cut(s)	34, 167
BsiSI	CCGG	8 cut(s)	133, 142, 232, 258, 284, 706, 734, 1229
BslI	CCNNNNNNNGG	7 cut(s)	174, 238, 884, 985, 1152, 1234, 1581
BsmAI	GTCTC	2 cut(s)	688, 1613
BsmI	GAATGC	1 cut(s)	1340
BsnI	GGCC	5 cut(s)	178, 191, 215, 872, 1145
BsoBI	CYCGRG	2 cut(s)	34, 167
Bsp120I	GGGCCC	1 cut(s)	213
Bsp1286I	GDGCHC	3 cut(s)	217, 273, 594
Bsp13I	TCCGGA	2 cut(s)	141, 283
Bsp1407I	TGTACA	1 cut(s)	606
Bsp143I	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
Bsp19I	CCATGG	1 cut(s)	1580
BspACI	CCGC	8 cut(s)	217, 223, 235, 356, 715, 1478, 1550, 1643
BspANI	GGCC	5 cut(s)	178, 191, 215, 872, 1145
BspCNI	CTCAG	2 cut(s)	581, 1132
BspEI	TCCGGA	2 cut(s)	141, 283
BspFNI	CGCG	1 cut(s)	1293
BspLI	GGNNCC	2 cut(s)	215, 1146
BspPI	GGATC	2 cut(s)	30, 152
BsrBI	CCGCTC	1 cut(s)	1643
BsrDI	GCAATG	3 cut(s)	697, 1378, 1593
BsrFI	RCCGGY	4 cut(s)	132, 231, 257, 705
BsrGI	TGTACA	1 cut(s)	606
BsrI	ACTGG	5 cut(s)	198, 422, 768, 990, 1543
BssAI	RCCGGY	4 cut(s)	132, 231, 257, 705
BssECI	CCNNGG	6 cut(s)	35, 42, 186, 638, 1256, 1580
BssMI	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
BssNI	GRCGYC	2 cut(s)	90, 255
BssT1I	CCWWGG	1 cut(s)	1580
Bst2UI	CCWGG	5 cut(s)	175, 639, 794, 1258, 1280
Bst4CI	ACNGT	5 cut(s)	46, 73, 119, 439, 611
Bst6I	CTCTTC	1 cut(s)	1133
BstACI	GRCGYC	2 cut(s)	90, 255
BstAUI	TGTACA	1 cut(s)	606
BstBAI	YACGTR	1 cut(s)	547
BstC8I	GCNNGC	7 cut(s)	193, 217, 227, 233, 259, 707, 1024
BstDEI	CTNAG	3 cut(s)	568, 1140, 1637
BstDSI	CCRYGG	2 cut(s)	42, 1580
BstF5I	GGATG	5 cut(s)	328, 528, 940, 1103, 1437
BstFNI	CGCG	1 cut(s)	1293
BstH2I	RGCGCY	1 cut(s)	232
BstHHI	GCGC	3 cut(s)	231, 1293, 1378
BstKTI	GATC	6 cut(s)	25, 147, 153, 297, 916, 1487
BstMAI	GTCTC	2 cut(s)	688, 1613
BstMBI	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
BstMCI	CGRYCG	2 cut(s)	87, 133
BstMWI	GCNNNNNNNGC	5 cut(s)	98, 212, 652, 794, 1032
BstNI	CCWGG	5 cut(s)	175, 639, 794, 1258, 1280
BstNSI	RCATGY	1 cut(s)	1080
BstSCI	CCNGG	6 cut(s)	173, 637, 792, 1227, 1256, 1278
BstSFI	CTRYAG	2 cut(s)	435, 1558
BstSLI	GKGCMC	1 cut(s)	217
BstUI	CGCG	1 cut(s)	1293
BstX2I	RGATCY	2 cut(s)	22, 294
BstXI	CCANNNNNNTGG	3 cut(s)	49, 1352, 1415
BstYI	RGATCY	2 cut(s)	22, 294
BsuRI	GGCC	5 cut(s)	178, 191, 215, 872, 1145
BtgI	CCRYGG	2 cut(s)	42, 1580
BtsCI	GGATG	5 cut(s)	328, 528, 940, 1103, 1437
BtsI	GCAGTG	2 cut(s)	1271, 1467
BtsIMutI	CAGTG	5 cut(s)	775, 1271, 1455, 1467, 1660
Cac8I	GCNNGC	7 cut(s)	193, 217, 227, 233, 259, 707, 1024
CaiI	CAGNNNCTG	2 cut(s)	638, 1662
CfoI	GCGC	3 cut(s)	231, 1293, 1378
Cfr10I	RCCGGY	4 cut(s)	132, 231, 257, 705
Cfr13I	GGNCC	7 cut(s)	39, 177, 213, 214, 1144, 1282, 1390
CseI	GACGC	3 cut(s)	98, 263, 1206
Csp6I	GTAC	5 cut(s)	607, 615, 820, 1276, 1628
CspAI	ACCGGT	1 cut(s)	132
CviAII	CATG	9 cut(s)	154, 604, 691, 727, 1045, 1077, 1094, 1387, 1581
CviQI	GTAC	5 cut(s)	607, 615, 820, 1276, 1628
DdeI	CTNAG	3 cut(s)	568, 1140, 1637
DpnI	GATC	6 cut(s)	24, 146, 152, 296, 915, 1486
DpnII	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
DrdI	GACNNNNNNGTC	1 cut(s)	736
DseDI	GACNNNNNNGTC	1 cut(s)	736
Eam1104I	CTCTTC	1 cut(s)	1133
EarI	CTCTTC	1 cut(s)	1133
Ecl136II	GAGCTC	2 cut(s)	271, 592
Eco130I	CCWWGG	1 cut(s)	1580
Eco147I	AGGCCT	1 cut(s)	191
Eco24I	GRGCYC	3 cut(s)	217, 273, 594
Eco47I	GGWCC	3 cut(s)	39, 1282, 1390
Eco53kI	GAGCTC	2 cut(s)	271, 592
Eco57I	CTGAAG	3 cut(s)	366, 804, 1307
Eco72I	CACGTG	1 cut(s)	547
Eco88I	CYCGRG	2 cut(s)	34, 167
EcoICRI	GAGCTC	2 cut(s)	271, 592
EcoO109I	RGGNCCY	1 cut(s)	1144
EcoRII	CCWGG	5 cut(s)	173, 637, 792, 1256, 1278
EcoT14I	CCWWGG	1 cut(s)	1580
EcoT38I	GRGCYC	3 cut(s)	217, 273, 594
ErhI	CCWWGG	1 cut(s)	1580
FaeI	CATG	9 cut(s)	157, 607, 694, 730, 1048, 1080, 1097, 1390, 1584
FalI	AAGNNNNNCTT	2 cut(s)	1055, 1087
FatI	CATG	9 cut(s)	153, 603, 690, 726, 1044, 1076, 1093, 1386, 1580
FauI	CCCGC	2 cut(s)	224, 228
FblI	GTMKAC	1 cut(s)	83
FokI	GGATG	5 cut(s)	335, 535, 947, 1090, 1444
FriOI	GRGCYC	3 cut(s)	217, 273, 594
FspBI	CTAG	2 cut(s)	755, 881
FspI	TGCGCA	1 cut(s)	1377
GlaI	GCGC	3 cut(s)	230, 1292, 1377
GsuI	CTGGAG	1 cut(s)	1007
HaeII	RGCGCY	1 cut(s)	232
HaeIII	GGCC	5 cut(s)	178, 191, 215, 872, 1145
HapII	CCGG	8 cut(s)	133, 142, 232, 258, 284, 706, 734, 1229
HgaI	GACGC	3 cut(s)	98, 263, 1206
HhaI	GCGC	3 cut(s)	231, 1293, 1378
Hin1I	GRCGYC	2 cut(s)	90, 255
Hin1II	CATG	9 cut(s)	157, 607, 694, 730, 1048, 1080, 1097, 1390, 1584
Hin6I	GCGC	3 cut(s)	229, 1291, 1376
HinP1I	GCGC	3 cut(s)	229, 1291, 1376
HincII	GTYRAC	2 cut(s)	84, 409
HindII	GTYRAC	2 cut(s)	84, 409
HindIII	AAGCTT	1 cut(s)	1109
HpaII	CCGG	8 cut(s)	133, 142, 232, 258, 284, 706, 734, 1229
HphI	GGTGA	3 cut(s)	58, 369, 877
Hpy166II	GTNNAC	6 cut(s)	84, 409, 1276, 1355, 1465, 1628
Hpy188I	TCNGA	8 cut(s)	58, 130, 187, 277, 415, 535, 571, 931
Hpy8I	GTNNAC	6 cut(s)	84, 409, 1276, 1355, 1465, 1628
Hpy99I	CGWCG	4 cut(s)	68, 85, 92, 1200
HpyAV	CCTTC	7 cut(s)	112, 118, 244, 390, 774, 1262, 1435
HpyCH4III	ACNGT	5 cut(s)	46, 73, 119, 439, 611
HpyCH4IV	ACGT	1 cut(s)	546
HpyF10VI	GCNNNNNNNGC	5 cut(s)	98, 212, 652, 794, 1032
HpyF3I	CTNAG	3 cut(s)	568, 1140, 1637
HpySE526I	ACGT	1 cut(s)	546
Hsp92I	GRCGYC	2 cut(s)	90, 255
Hsp92II	CATG	9 cut(s)	157, 607, 694, 730, 1048, 1080, 1097, 1390, 1584
HspAI	GCGC	3 cut(s)	229, 1291, 1376
Kpn2I	TCCGGA	2 cut(s)	141, 283
KroI	GCCGGC	3 cut(s)	231, 257, 705
KroNI	GCCGGC	3 cut(s)	233, 259, 707
Kzo9I	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
LmnI	GCTCC	7 cut(s)	144, 268, 289, 589, 597, 640, 1645
LweI	GCATC	6 cut(s)	343, 796, 925, 935, 1112, 1422
MaeI	CTAG	2 cut(s)	755, 881
MaeII	ACGT	1 cut(s)	546
MaeIII	GTNAC	3 cut(s)	73, 119, 547
MalI	GATC	6 cut(s)	24, 146, 152, 296, 915, 1486
MbiI	CCGCTC	1 cut(s)	1643
MboI	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
MboII	GAAGA	6 cut(s)	362, 383, 584, 1120, 1123, 1357
MfeI	CAATTG	1 cut(s)	897
MflI	RGATCY	2 cut(s)	22, 294
MhlI	GDGCHC	3 cut(s)	217, 273, 594
MluCI	AATT	6 cut(s)	474, 598, 897, 1244, 1306, 1502
MlyI	GAGTC	7 cut(s)	62, 179, 404, 499, 746, 964, 1187
MmeI	TCCRAC	2 cut(s)	36, 153
MreI	CGCCGGCG	2 cut(s)	231, 257
MroI	TCCGGA	2 cut(s)	141, 283
MroNI	GCCGGC	3 cut(s)	231, 257, 705
MroXI	GAANNNNTTC	1 cut(s)	1589
MseI	TTAA	3 cut(s)	597, 620, 1233
MslI	CAYNNNNRTG	2 cut(s)	47, 1350
MspI	CCGG	8 cut(s)	133, 142, 232, 258, 284, 706, 734, 1229
MspR9I	CCNGG	6 cut(s)	175, 639, 794, 1229, 1258, 1280
MunI	CAATTG	1 cut(s)	897
Mva1269I	GAATGC	1 cut(s)	1340
MvaI	CCWGG	5 cut(s)	175, 639, 794, 1258, 1280
MvnI	CGCG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	5 cut(s)	98, 212, 652, 794, 1032
NaeI	GCCGGC	3 cut(s)	233, 259, 707
NciI	CCSGG	1 cut(s)	1229
NcoI	CCATGG	1 cut(s)	1580
NdeII	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
NgoMIV	GCCGGC	3 cut(s)	231, 257, 705
NlaIII	CATG	9 cut(s)	157, 607, 694, 730, 1048, 1080, 1097, 1390, 1584
NlaIV	GGNNCC	2 cut(s)	215, 1146
NmuCI	GTSAC	2 cut(s)	73, 547
NsbI	TGCGCA	1 cut(s)	1377
NspI	RCATGY	1 cut(s)	1080
OliI	CACNNNNGTG	1 cut(s)	1350
PceI	AGGCCT	1 cut(s)	191
PciI	ACATGT	1 cut(s)	1076
PcsI	WCGNNNNNNNCGW	2 cut(s)	77, 111
PctI	GAATGC	1 cut(s)	1340
PdiI	GCCGGC	3 cut(s)	233, 259, 707
PdmI	GAANNNNTTC	1 cut(s)	1589
PfeI	GAWTC	8 cut(s)	182, 374, 447, 530, 558, 888, 1161, 1192
PflFI	GACNNNGTC	1 cut(s)	950
PflMI	CCANNNNNTGG	1 cut(s)	1581
PinAI	ACCGGT	1 cut(s)	132
PleI	GAGTC	7 cut(s)	61, 178, 404, 498, 745, 964, 1186
PmaCI	CACGTG	1 cut(s)	547
PmlI	CACGTG	1 cut(s)	547
PpsI	GAGTC	7 cut(s)	61, 178, 404, 498, 745, 964, 1186
Ppu21I	YACGTR	1 cut(s)	547
PscI	ACATGT	1 cut(s)	1076
PsiI	TTATAA	1 cut(s)	837
Psp124BI	GAGCTC	2 cut(s)	273, 594
Psp6I	CCWGG	5 cut(s)	173, 637, 792, 1256, 1278
PspCI	CACGTG	1 cut(s)	547
PspGI	CCWGG	5 cut(s)	173, 637, 792, 1256, 1278
PspN4I	GGNNCC	2 cut(s)	215, 1146
PspOMI	GGGCCC	1 cut(s)	213
PspPI	GGNCC	7 cut(s)	39, 177, 213, 214, 1144, 1282, 1390
PstNI	CAGNNNCTG	2 cut(s)	638, 1662
PsuI	RGATCY	2 cut(s)	22, 294
PsyI	GACNNNGTC	1 cut(s)	950
RsaI	GTAC	5 cut(s)	608, 616, 821, 1277, 1629
RsaNI	GTAC	5 cut(s)	607, 615, 820, 1276, 1628
RseI	CAYNNNNRTG	2 cut(s)	47, 1350
SacI	GAGCTC	2 cut(s)	273, 594
SalI	GTCGAC	1 cut(s)	82
SaqAI	TTAA	3 cut(s)	597, 620, 1233
Sau3AI	GATC	6 cut(s)	22, 144, 150, 294, 913, 1484
Sau96I	GGNCC	7 cut(s)	39, 177, 213, 214, 1144, 1282, 1390
SchI	GAGTC	7 cut(s)	62, 179, 404, 499, 746, 964, 1187
ScrFI	CCNGG	6 cut(s)	175, 639, 794, 1229, 1258, 1280
SduI	GDGCHC	3 cut(s)	217, 273, 594
SfaNI	GCATC	6 cut(s)	343, 796, 925, 935, 1112, 1422
SfcI	CTRYAG	2 cut(s)	435, 1558
SgrAI	CRCCGGYG	2 cut(s)	231, 257
SinI	GGWCC	3 cut(s)	39, 1282, 1390
SmiMI	CAYNNNNRTG	2 cut(s)	47, 1350
SmlI	CTYRAG	2 cut(s)	553, 1118
SmoI	CTYRAG	2 cut(s)	553, 1118
Sse9I	AATT	6 cut(s)	474, 598, 897, 1244, 1306, 1502
SseBI	AGGCCT	1 cut(s)	191
SsiI	CCGC	8 cut(s)	217, 223, 235, 356, 715, 1478, 1550, 1643
SspI	AATATT	1 cut(s)	721
SspMI	CTAG	2 cut(s)	755, 881
SstI	GAGCTC	2 cut(s)	273, 594
StuI	AGGCCT	1 cut(s)	191
StyD4I	CCNGG	6 cut(s)	173, 637, 792, 1227, 1256, 1278
StyI	CCWWGG	1 cut(s)	1580
TaaI	ACNGT	5 cut(s)	46, 73, 119, 439, 611
TaiI	ACGT	1 cut(s)	549
TaqI	TCGA	9 cut(s)	30, 83, 147, 891, 905, 965, 1015, 1054, 1195
TaqII	GACCGA	1 cut(s)	101
TasI	AATT	6 cut(s)	474, 598, 897, 1244, 1306, 1502
TatI	WGTACW	2 cut(s)	606, 1627
TauI	GCSGC	1 cut(s)	1481
TfiI	GAWTC	8 cut(s)	182, 374, 447, 530, 558, 888, 1161, 1192
Tru1I	TTAA	3 cut(s)	597, 620, 1233
Tru9I	TTAA	3 cut(s)	597, 620, 1233
TscAI	CASTG	4 cut(s)	775, 1271, 1455, 1467
TseFI	GTSAC	2 cut(s)	73, 547
Tsp45I	GTSAC	2 cut(s)	73, 547
TspDTI	ATGAA	7 cut(s)	17, 342, 363, 592, 1110, 1582, 1606
TspGWI	ACGGA	3 cut(s)	35, 483, 1511
TspRI	CASTG	4 cut(s)	775, 1271, 1455, 1467
Tth111I	GACNNNGTC	1 cut(s)	950
Van91I	CCANNNNNTGG	1 cut(s)	1581
VpaK11BI	GGWCC	3 cut(s)	39, 1282, 1390
XapI	RAATTY	3 cut(s)	1244, 1306, 1502
XbaI	TCTAGA	1 cut(s)	754
XceI	RCATGY	1 cut(s)	1080
XcmI	CCANNNNNNNNNTGG	1 cut(s)	775
XmiI	GTMKAC	1 cut(s)	83
XmnI	GAANNNNTTC	1 cut(s)	1589
XspI	CTAG	2 cut(s)	755, 881

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.