Transcriptional adapter
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1125900.v1.1 |
| pyrus_communis | pycom09g05000 |
| rosa_chinensis | RchiOBHm_Chr1g0367451 RchiOBHm_Chr1g0367461 RchiOBHm_Chr7g0232701 |
| rosa_multiflora | Rmu_sc0023109.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00005270 Rroxscaffold_1G00071670 |
| rosa_samantha | Rh3DG331300 Rh4AG082800 Rh5DG469600 Rh7AG348500 Rh7AG348600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 5 |
| AcuI | CTGAAG | 2 cut(s) | 62, 174 |
| AfaI | GTAC | 1 cut(s) | 103 |
| AgsI | TTSAA | 2 cut(s) | 69, 131 |
| AluBI | AGCT | 2 cut(s) | 40, 152 |
| AluI | AGCT | 2 cut(s) | 40, 152 |
| AoxI | GGCC | 1 cut(s) | 193 |
| ApeKI | GCWGC | 1 cut(s) | 55 |
| ApoI | RAATTY | 1 cut(s) | 5 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 64 |
| AspS9I | GGNCC | 1 cut(s) | 194 |
| BbvI | GCAGC | 1 cut(s) | 42 |
| BceAI | ACGGC | 1 cut(s) | 84 |
| BisI | GCNGC | 1 cut(s) | 56 |
| BlsI | GCNGC | 1 cut(s) | 57 |
| BmgT120I | GGNCC | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 1 cut(s) | 111 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseMII | CTCAG | 1 cut(s) | 15 |
| BseRI | GAGGAG | 1 cut(s) | 88 |
| BseXI | GCAGC | 1 cut(s) | 42 |
| BshFI | GGCC | 1 cut(s) | 195 |
| BsnI | GGCC | 1 cut(s) | 195 |
| BspANI | GGCC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 1 cut(s) | 16 |
| BssECI | CCNNGG | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 1 cut(s) | 166 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 89, 170, 192 |
| BstV1I | GCAGC | 1 cut(s) | 42 |
| BsuRI | GGCC | 1 cut(s) | 195 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| Cac8I | GCNNGC | 1 cut(s) | 166 |
| Cfr13I | GGNCC | 1 cut(s) | 194 |
| Csp6I | GTAC | 1 cut(s) | 102 |
| CviJI | RGCY | 4 cut(s) | 40, 83, 152, 195 |
| CviKI_1 | RGCY | 4 cut(s) | 40, 83, 152, 195 |
| CviQI | GTAC | 1 cut(s) | 102 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| Eco57I | CTGAAG | 2 cut(s) | 62, 174 |
| Fnu4HI | GCNGC | 1 cut(s) | 56 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 56 |
| GluI | GCNGC | 1 cut(s) | 56 |
| HaeIII | GGCC | 1 cut(s) | 195 |
| HinfI | GANTC | 1 cut(s) | 60 |
| Hpy188I | TCNGA | 1 cut(s) | 112 |
| HpyCH4IV | ACGT | 1 cut(s) | 34 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 89, 170, 192 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| HpySE526I | ACGT | 1 cut(s) | 34 |
| LpnPI | CCDG | 1 cut(s) | 78 |
| Lsp1109I | GCAGC | 1 cut(s) | 42 |
| MaeII | ACGT | 1 cut(s) | 34 |
| MboII | GAAGA | 1 cut(s) | 167 |
| MluCI | AATT | 1 cut(s) | 5 |
| MnlI | CCTC | 5 cut(s) | 19, 66, 69, 106, 181 |
| MroXI | GAANNNNTTC | 1 cut(s) | 64 |
| MseI | TTAA | 2 cut(s) | 9, 47 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 89, 170, 192 |
| PdmI | GAANNNNTTC | 1 cut(s) | 64 |
| PfeI | GAWTC | 1 cut(s) | 60 |
| PkrI | GCNGC | 1 cut(s) | 57 |
| PspPI | GGNCC | 1 cut(s) | 194 |
| RsaI | GTAC | 1 cut(s) | 103 |
| RsaNI | GTAC | 1 cut(s) | 102 |
| SaqAI | TTAA | 2 cut(s) | 9, 47 |
| SatI | GCNGC | 1 cut(s) | 56 |
| Sau96I | GGNCC | 1 cut(s) | 194 |
| SetI | ASST | 5 cut(s) | 37, 42, 129, 154, 192 |
| SgeI | CNNG | 8 cut(s) | 47, 96, 105, 124, 140, 177, 186, 199 |
| Sse9I | AATT | 1 cut(s) | 5 |
| TaiI | ACGT | 1 cut(s) | 37 |
| TasI | AATT | 1 cut(s) | 5 |
| TfiI | GAWTC | 1 cut(s) | 60 |
| Tru1I | TTAA | 2 cut(s) | 9, 47 |
| Tru9I | TTAA | 2 cut(s) | 9, 47 |
| TscAI | CASTG | 1 cut(s) | 28 |
| TseI | GCWGC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 1 cut(s) | 45 |
| TspRI | CASTG | 1 cut(s) | 28 |
| XapI | RAATTY | 1 cut(s) | 5 |
| XmnI | GAANNNNTTC | 1 cut(s) | 64 |