RchiOBHm_Chr1g0370311

Dual specificity tyrosine-phosphorylation-regulated kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0006817
Physical Location & Seq
Reverse (-)
59802822 .. 59805679
2858 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59447

Sequence Viewer

Length: 1065 bp
ATGTACAAAACTGATGAGAATGAGTATGAAGTTTTCGATTTAAGAGTCATACACAGAAAAAACAGGACTGGATTTGAAGCAAACAAGGATCTACCTATTGTGCTAAAGACCATAGTTGCAGGCAGATACTATATAACTGAATATCTGGGTTCGGCTGCTTTTAGTAGGGTTGTACAGGCTCATGATCTTCACACAGGAGTCGATGTTTGCCTCAAGATCATAAAAAATGATAAAGATTTTTTTGATCAGAGTTTAGATGAGATTAAACTTCTTAAGTTTGTAAACAAGTATGACCCTGGAGATGAGCGCCACATTCTGCGACTTTATGACTACTTCTATCACCAGGAGCACCTCTTCATTGTTTGTGAGCTACTCAAGGCGAATTTGTACGAATTTCAGAAGTTCAGTCGAGAATCTGGTGGAGAAGCATACTTTACATTTAGAAGGTTGCAGGCCATAACCCGTCAATGTTTAGAGGCATTGGAATTCTTGCATCACCTGGGAGTTATTCACTGTGATCTCAAGCCTGAGAACATTCTCATTAAAAGTTACAGAAGATGTGAAATAAAAGTCATTGATCTTGGAAGCAGTTGCTTTCAAACAGACAACTTGTGCCTATATGTACAATCTCGTTCCTACAGGGCTCCTGAAGTCATGCTTGGGCTCTCATATGACGAGAAGATTGACATGTGGTCTCTTGGATGCATCTTGGCTGAGCTATGCTCCGGAGAAGTGCTTTTTCCAAATGATGGGATTGTGACGATCCTTGCACGTATCATTGGAATGCTTGGTCCTATTGATCTGGATATGTTAGTGAAAGGACAGGAGACAGACAAGTACTTCACAAACGAATTAGATCTCTACCACATAAATGAGGAGACAAACCAATTGGAATACATAATCCCTGAGGACTCCTCCCTGGAGCAACACCTGCAAGTAACCGATATTGGGTTCATCGACTTTGTCCAAAGCTTGCTTGAGATCAATCCTCAGAGACGCCCAAGCGCAGCGGAGGCACTAGAGCACCCCTGGCTTTCCTATTCATACGAATCGAGTTCTTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000166 GO:0000278 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005886 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008289 GO:0008360 GO:0008361 GO:0009898 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0015629 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0019897 GO:0019898 GO:0022402 GO:0022603 GO:0022604 GO:0023052 GO:0030307 GO:0030427 GO:0030554 GO:0030863 GO:0030864 GO:0031234 GO:0031567 GO:0031569 GO:0032153 GO:0032155 GO:0032465 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032878 GO:0032879 GO:0032880 GO:0032954 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0035091 GO:0035556 GO:0035639 GO:0035839 GO:0036094 GO:0036211 GO:0040008 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044087 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0045786 GO:0045927 GO:0045930 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051285 GO:0051286 GO:0051302 GO:0051493 GO:0051510 GO:0051512 GO:0051516 GO:0051518 GO:0051519 GO:0051641 GO:0051716 GO:0051726 GO:0060341 GO:0065007 GO:0065008 GO:0070727 GO:0070938 GO:0071342 GO:0071704 GO:0071840 GO:0071944 GO:0072395 GO:0072413 GO:0072453 GO:0072471 GO:0090066 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0099568 GO:0099738 GO:0120105 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901648 GO:1901981 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902412 GO:1902471 GO:1902749 GO:1902750 GO:1903047 GO:1903066 GO:1903067 GO:1903076 GO:1903077 GO:1903436 GO:1903505 GO:1903827 GO:1903828 GO:1904375 GO:1904376 GO:1905475 GO:1905476 GO:2000073 GO:2000769
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

354

Amino Acids

41.22

Weight (kDa)

5.01

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 45 - 345 3.1e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 46 - 244 1.7e-18 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 939
Acc36I ACCTGC 1 cut(s) 939
AccB7I CCANNNNNTGG 1 cut(s) 749
AccIII TCCGGA 1 cut(s) 725
AciI CCGC 1 cut(s) 1010
AclWI GGATC 2 cut(s) 96, 757
AcsI RAATTY 3 cut(s) 382, 392, 485
AcuI CTGAAG 1 cut(s) 669
AcyI GRCGYC 1 cut(s) 997
AfaI GTAC 5 cut(s) 5, 174, 389, 624, 839
AfiI CCNNNNNNNGG 2 cut(s) 749, 948
AflII CTTAAG 1 cut(s) 272
AflIII ACRYGT 1 cut(s) 687
AgsI TTSAA 2 cut(s) 77, 599
AhdI GACNNNNNGTC 1 cut(s) 691
AjnI CCWGG 5 cut(s) 295, 342, 498, 918, 1028
AjuI GAANNNNNNNTTGG 2 cut(s) 642, 674
AluBI AGCT 3 cut(s) 370, 718, 972
AluI AGCT 3 cut(s) 370, 718, 972
Alw21I GWGCWC 2 cut(s) 351, 1026
Alw26I GTCTC 4 cut(s) 699, 821, 872, 988
AlwI GGATC 2 cut(s) 96, 757
Aor13HI TCCGGA 1 cut(s) 725
AoxI GGCC 1 cut(s) 453
ApeKI GCWGC 2 cut(s) 155, 1007
ApoI RAATTY 3 cut(s) 382, 392, 485
AspLEI GCGC 2 cut(s) 309, 1007
AspS9I GGNCC 1 cut(s) 791
AsuHPI GGTGA 2 cut(s) 332, 488
AvaII GGWCC 1 cut(s) 791
AxyI CCTNAGG 1 cut(s) 906
BanII GRGCYC 2 cut(s) 646, 666
Bbv12I GWGCWC 2 cut(s) 351, 1026
BbvI GCAGC 2 cut(s) 142, 1019
BccI CCATC 1 cut(s) 743
BciT130I CCWGG 5 cut(s) 297, 344, 500, 920, 1030
BclI TGATCA 1 cut(s) 244
BcoDI GTCTC 4 cut(s) 699, 821, 872, 988
BfaI CTAG 1 cut(s) 1019
BfmI CTRYAG 1 cut(s) 637
BfoI RGCGCY 1 cut(s) 310
BfrI CTTAAG 1 cut(s) 272
BfuAI ACCTGC 1 cut(s) 939
BglII AGATCT 1 cut(s) 856
BisI GCNGC 2 cut(s) 156, 1008
BlpI GCTNAGC 1 cut(s) 714
BlsI GCNGC 2 cut(s) 157, 1009
BmcAI AGTACT 1 cut(s) 839
Bme1390I CCNGG 5 cut(s) 297, 344, 500, 920, 1030
Bme18I GGWCC 1 cut(s) 791
BmeRI GACNNNNNGTC 1 cut(s) 691
BmgT120I GGNCC 1 cut(s) 791
BmiI GGNNCC 1 cut(s) 645
BmrFI CCNGG 5 cut(s) 297, 344, 500, 920, 1030
BmsI GCATC 3 cut(s) 502, 692, 714
BplI GAGNNNNNCTC 4 cut(s) 707, 739, 899, 931
BpmI CTGGAG 2 cut(s) 318, 941
Bpu1102I GCTNAGC 1 cut(s) 714
BpuEI CTTGAG 4 cut(s) 197, 359, 506, 998
BsaAI YACGTR 1 cut(s) 773
BsaHI GRCGYC 1 cut(s) 997
BsaI GGTCTC 1 cut(s) 699
BsaJI CCNNGG 4 cut(s) 295, 499, 918, 1028
BsaWI WCCGGW 1 cut(s) 725
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 2 cut(s) 749, 948
Bse1I ACTGG 1 cut(s) 73
Bse21I CCTNAGG 1 cut(s) 906
BseAI TCCGGA 1 cut(s) 725
BseBI CCWGG 5 cut(s) 297, 344, 500, 920, 1030
BseDI CCNNGG 4 cut(s) 295, 499, 918, 1028
BseGI GGATG 1 cut(s) 707
BseLI CCNNNNNNNGG 2 cut(s) 749, 948
BseMII CTCAG 4 cut(s) 519, 705, 897, 1004
BseNI ACTGG 1 cut(s) 73
BseRI GAGGAG 2 cut(s) 890, 904
BseXI GCAGC 2 cut(s) 142, 1019
BshFI GGCC 1 cut(s) 455
BsiHKAI GWGCWC 2 cut(s) 351, 1026
BsiSI CCGG 1 cut(s) 726
BslI CCNNNNNNNGG 2 cut(s) 749, 948
BsmAI GTCTC 4 cut(s) 699, 821, 872, 988
BsmBI CGTCTC 1 cut(s) 988
BsmI GAATGC 1 cut(s) 789
BsnI GGCC 1 cut(s) 455
Bso31I GGTCTC 1 cut(s) 699
Bsp1286I GDGCHC 4 cut(s) 351, 646, 666, 1026
Bsp13I TCCGGA 1 cut(s) 725
Bsp1407I TGTACA 3 cut(s) 3, 172, 622
Bsp1720I GCTNAGC 1 cut(s) 714
BspACI CCGC 1 cut(s) 1010
BspANI GGCC 1 cut(s) 455
BspCNI CTCAG 4 cut(s) 520, 706, 898, 1003
BspEI TCCGGA 1 cut(s) 725
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 1 cut(s) 645
BspMI ACCTGC 1 cut(s) 939
BspPI GGATC 2 cut(s) 96, 757
BspTI CTTAAG 1 cut(s) 272
BspTNI GGTCTC 1 cut(s) 699
BsrGI TGTACA 3 cut(s) 3, 172, 622
BsrI ACTGG 1 cut(s) 73
BssECI CCNNGG 4 cut(s) 295, 499, 918, 1028
BssNI GRCGYC 1 cut(s) 997
Bst2UI CCWGG 5 cut(s) 297, 344, 500, 920, 1030
Bst4CI ACNGT 1 cut(s) 515
Bst6I CTCTTC 1 cut(s) 359
BstACI GRCGYC 1 cut(s) 997
BstAFI CTTAAG 1 cut(s) 272
BstAPI GCANNNNNTGC 1 cut(s) 931
BstAUI TGTACA 3 cut(s) 3, 172, 622
BstBAI YACGTR 1 cut(s) 773
BstC8I GCNNGC 3 cut(s) 121, 453, 974
BstDEI CTNAG 4 cut(s) 528, 714, 906, 990
BstF5I GGATG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 310
BstHHI GCGC 2 cut(s) 309, 1007
BstMAI GTCTC 4 cut(s) 699, 821, 872, 988
BstMWI GCNNNNNNNGC 3 cut(s) 931, 1013, 1030
BstNI CCWGG 5 cut(s) 297, 344, 500, 920, 1030
BstNSI RCATGY 1 cut(s) 691
BstSCI CCNGG 5 cut(s) 295, 342, 498, 918, 1028
BstSFI CTRYAG 1 cut(s) 637
BstV1I GCAGC 2 cut(s) 142, 1019
BstX2I RGATCY 2 cut(s) 88, 856
BstYI RGATCY 2 cut(s) 88, 856
Bsu36I CCTNAGG 1 cut(s) 906
BsuRI GGCC 1 cut(s) 455
BtsCI GGATG 1 cut(s) 707
BtsIMutI CAGTG 1 cut(s) 511
BveI ACCTGC 1 cut(s) 939
Cac8I GCNNGC 3 cut(s) 121, 453, 974
CciI TCATGA 1 cut(s) 181
CfoI GCGC 2 cut(s) 309, 1007
Cfr13I GGNCC 1 cut(s) 791
CseI GACGC 1 cut(s) 1005
Csp6I GTAC 5 cut(s) 4, 173, 388, 623, 838
CviAII CATG 3 cut(s) 182, 655, 688
CviQI GTAC 5 cut(s) 4, 173, 388, 623, 838
DdeI CTNAG 4 cut(s) 528, 714, 906, 990
DriI GACNNNNNGTC 1 cut(s) 691
Eam1104I CTCTTC 1 cut(s) 359
Eam1105I GACNNNNNGTC 1 cut(s) 691
EarI CTCTTC 1 cut(s) 359
Eco24I GRGCYC 2 cut(s) 646, 666
Eco31I GGTCTC 1 cut(s) 699
Eco47I GGWCC 1 cut(s) 791
Eco57I CTGAAG 1 cut(s) 669
Eco81I CCTNAGG 1 cut(s) 906
EcoRI GAATTC 1 cut(s) 485
EcoRII CCWGG 5 cut(s) 295, 342, 498, 918, 1028
EcoT22I ATGCAT 1 cut(s) 707
EcoT38I GRGCYC 2 cut(s) 646, 666
Esp3I CGTCTC 1 cut(s) 988
FaeI CATG 3 cut(s) 185, 658, 691
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FatI CATG 3 cut(s) 181, 654, 687
FauNDI CATATG 1 cut(s) 670
FbaI TGATCA 1 cut(s) 244
Fnu4HI GCNGC 2 cut(s) 156, 1008
FokI GGATG 1 cut(s) 714
FriOI GRGCYC 2 cut(s) 646, 666
Fsp4HI GCNGC 2 cut(s) 156, 1008
FspBI CTAG 1 cut(s) 1019
GlaI GCGC 2 cut(s) 308, 1006
GluI GCNGC 2 cut(s) 156, 1008
GsuI CTGGAG 2 cut(s) 318, 941
HaeII RGCGCY 1 cut(s) 310
HaeIII GGCC 1 cut(s) 455
HapII CCGG 1 cut(s) 726
HgaI GACGC 1 cut(s) 1005
HhaI GCGC 2 cut(s) 309, 1007
Hin1I GRCGYC 1 cut(s) 997
Hin1II CATG 3 cut(s) 185, 658, 691
Hin6I GCGC 2 cut(s) 307, 1005
HinP1I GCGC 2 cut(s) 307, 1005
HindIII AAGCTT 1 cut(s) 970
HinfI GANTC 5 cut(s) 45, 198, 413, 911, 1049
HpaII CCGG 1 cut(s) 726
HphI GGTGA 2 cut(s) 332, 488
Hpy166II GTNNAC 1 cut(s) 283
Hpy188I TCNGA 3 cut(s) 249, 399, 993
Hpy188III TCNNGA 6 cut(s) 182, 214, 410, 647, 726, 803
Hpy8I GTNNAC 1 cut(s) 283
HpyAV CCTTC 1 cut(s) 438
HpyCH4III ACNGT 1 cut(s) 515
HpyCH4IV ACGT 1 cut(s) 772
HpyCH4V TGCA 6 cut(s) 119, 451, 493, 705, 770, 934
HpyF10VI GCNNNNNNNGC 3 cut(s) 931, 1013, 1030
HpyF3I CTNAG 4 cut(s) 528, 714, 906, 990
HpySE526I ACGT 1 cut(s) 772
Hsp92I GRCGYC 1 cut(s) 997
Hsp92II CATG 3 cut(s) 185, 658, 691
HspAI GCGC 2 cut(s) 307, 1005
Kpn2I TCCGGA 1 cut(s) 725
Ksp22I TGATCA 1 cut(s) 244
LmnI GCTCC 4 cut(s) 346, 649, 728, 922
Lsp1109I GCAGC 2 cut(s) 142, 1019
LweI GCATC 3 cut(s) 502, 692, 714
MaeI CTAG 1 cut(s) 1019
MaeII ACGT 1 cut(s) 772
MaeIII GTNAC 3 cut(s) 548, 757, 937
MboII GAAGA 4 cut(s) 179, 346, 567, 691
MfeI CAATTG 1 cut(s) 887
MflI RGATCY 2 cut(s) 88, 856
MhlI GDGCHC 4 cut(s) 351, 646, 666, 1026
MluCI AATT 5 cut(s) 382, 392, 485, 851, 887
MlyI GAGTC 3 cut(s) 54, 207, 905
MnlI CCTC 8 cut(s) 221, 362, 469, 868, 901, 925, 999, 1006
Mph1103I ATGCAT 1 cut(s) 707
MroI TCCGGA 1 cut(s) 725
MseI TTAA 4 cut(s) 41, 264, 273, 543
MslI CAYNNNNRTG 2 cut(s) 782, 870
MspA1I CMGCKG 1 cut(s) 1010
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 1 cut(s) 726
MspR9I CCNGG 5 cut(s) 297, 344, 500, 920, 1030
MunI CAATTG 1 cut(s) 887
Mva1269I GAATGC 1 cut(s) 789
MvaI CCWGG 5 cut(s) 297, 344, 500, 920, 1030
MwoI GCNNNNNNNGC 3 cut(s) 931, 1013, 1030
NdeI CATATG 1 cut(s) 670
NlaIII CATG 3 cut(s) 185, 658, 691
NlaIV GGNNCC 1 cut(s) 645
NmuCI GTSAC 1 cut(s) 757
NsiI ATGCAT 1 cut(s) 707
NspI RCATGY 1 cut(s) 691
PagI TCATGA 1 cut(s) 181
PaqCI CACCTGC 1 cut(s) 939
PciI ACATGT 1 cut(s) 687
PctI GAATGC 1 cut(s) 789
PfeI GAWTC 2 cut(s) 413, 1049
PflFI GACNNNGTC 1 cut(s) 962
PflMI CCANNNNNTGG 1 cut(s) 749
PkrI GCNGC 2 cut(s) 157, 1009
PleI GAGTC 3 cut(s) 53, 206, 905
PpsI GAGTC 3 cut(s) 53, 206, 905
Ppu21I YACGTR 1 cut(s) 773
PscI ACATGT 1 cut(s) 687
Psp6I CCWGG 5 cut(s) 295, 342, 498, 918, 1028
PspGI CCWGG 5 cut(s) 295, 342, 498, 918, 1028
PspN4I GGNNCC 1 cut(s) 645
PspPI GGNCC 1 cut(s) 791
PsuI RGATCY 2 cut(s) 88, 856
PsyI GACNNNGTC 1 cut(s) 962
RsaI GTAC 5 cut(s) 5, 174, 389, 624, 839
RsaNI GTAC 5 cut(s) 4, 173, 388, 623, 838
RseI CAYNNNNRTG 2 cut(s) 782, 870
SaqAI TTAA 4 cut(s) 41, 264, 273, 543
SatI GCNGC 2 cut(s) 156, 1008
Sau96I GGNCC 1 cut(s) 791
ScaI AGTACT 1 cut(s) 839
SchI GAGTC 3 cut(s) 54, 207, 905
ScrFI CCNGG 5 cut(s) 297, 344, 500, 920, 1030
SduI GDGCHC 4 cut(s) 351, 646, 666, 1026
SetI ASST 9 cut(s) 97, 354, 372, 449, 501, 720, 775, 933, 974
SfaNI GCATC 3 cut(s) 502, 692, 714
SfcI CTRYAG 1 cut(s) 637
SinI GGWCC 1 cut(s) 791
SmiMI CAYNNNNRTG 2 cut(s) 782, 870
SmlI CTYRAG 5 cut(s) 212, 272, 374, 521, 977
SmoI CTYRAG 5 cut(s) 212, 272, 374, 521, 977
Sse9I AATT 5 cut(s) 382, 392, 485, 851, 887
SsiI CCGC 1 cut(s) 1010
SspMI CTAG 1 cut(s) 1019
StyD4I CCNGG 5 cut(s) 295, 342, 498, 918, 1028
TaaI ACNGT 1 cut(s) 515
TaiI ACGT 1 cut(s) 775
TaqI TCGA 5 cut(s) 36, 201, 409, 957, 1052
TasI AATT 5 cut(s) 382, 392, 485, 851, 887
TatI WGTACW 4 cut(s) 3, 172, 622, 837
TfiI GAWTC 2 cut(s) 413, 1049
Tru1I TTAA 4 cut(s) 41, 264, 273, 543
Tru9I TTAA 4 cut(s) 41, 264, 273, 543
TscAI CASTG 1 cut(s) 518
TseFI GTSAC 1 cut(s) 757
TseI GCWGC 2 cut(s) 155, 1007
Tsp45I GTSAC 1 cut(s) 757
TspDTI ATGAA 4 cut(s) 42, 346, 943, 1032
TspRI CASTG 1 cut(s) 518
Tth111I GACNNNGTC 1 cut(s) 962
Van91I CCANNNNNTGG 1 cut(s) 749
Vha464I CTTAAG 1 cut(s) 272
VpaK11BI GGWCC 1 cut(s) 791
XapI RAATTY 3 cut(s) 382, 392, 485
XceI RCATGY 1 cut(s) 691
XspI CTAG 1 cut(s) 1019
ZrmI AGTACT 1 cut(s) 839
Zsp2I ATGCAT 1 cut(s) 707
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.