Rorug01G0355700

Dual specificity tyrosine-phosphorylation-regulated kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0006817
Physical Location & Seq
Reverse (-)
47216002 .. 47220106
4105 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0355700.1

Sequence Viewer

Length: 3747 bp
ATGCACCTCTACAGTCTCACTCTCCAGCGCGCGACGGGCATAGTCTGCGCCATCAACGGCAACTTCTCCGGCGAAAAGACCCAAGAAATCGCCGTCGCCAGAGGCAAGGTCCTCGACCTTCTCCGCCCCGACGACACCGGTAAGATCCAGACTCTCCTCTCCGTTGAAATTTTCGGCGCCATTAGGTCTTTAGCTCCGTTTAGGCTTACCGGCTCCCGAAAAGACTACATTGTCGTCGGCTCCGATTCCGGCCGAATCGTAATCCTAGAATACAACAAAGATAAGAATGTATTTGATAAAATTCACCAAGAGACCTTCGGAAAATCCGGTTCTCGCCGGATTGTTCCGGGTCAGTACTTGGCGGTTGACCCGAAAGGGAGGGCTGTTATGGTTGGAGCCTGTGAGAAGCAGAAGCTAGTGTACATTTTGAATAGGGATGTAGCTAATAGGTTGACTATATCGTCGCCGTTGGAGGCACATAAGTCTCATACTATAGTGTTTTCGATTTGTGGGGTTGATTGTGGGTTTGATAATCCTGTATTTGCTGCCATTGAGCTGGATTATTCCGAGTTGGATCAGGATTCGAGTGGGAAGGTGGCTCGGAAGTATGTGACTTTCTATGAGCTTGATTTGGGGCTTAACCATGTGTGTAGGAAGTGGTCTGATCAGGTTGATGATGGGGCGAATTTGCTGGTTATGGTGCCGGGAGGTGGGGATGGGCCGAGTGGAGTGTTGGTTTGTGCAGAAAATTTTGTGATTTATAAGAATCAGGGACAGGGGGATGTGAGGGCTGTGATTCCTAGGCGTGCTGATTTGCCTGCGCAGCGTGGGGTTCTTATAGTTTCGGCAGCTACTTATAAGCTGAAGTCCATGTTCTTTTTTCTTTTGCAGACTGAGTATGGGGATATATTCAAGGTGACTTTGGAGCATAATGATGATGTTGTCTCGGAATTGAAGATCAAGTACTTTGATACAATCCCAGTCACAACTTCAATGTGTGTGTTGAATTCGCAGCTTTTGTTTGCTGCTTCGGAGTTTGGGAATCACGCTTTGTATCAGTTCCAGGCAATAGGCGAAGATCCTGATGTGGAGTCCTCCTCAGCTTTGTTCATGGAAACTGAAGAGGGTTTCCAGCCATTGTGTTTCCAACCTAGAAAACTTAAGAACCTTGTTGGGATTGATCAGGTTGAGAGCTTGACGCCGATAACGGACATGAAGGTCTCTAATCTGTTTGAAGAAGAAACGCCTCAAATATTTACGCTTTGCGGCCAGGGTCCTCGTTCATCTCTCAGGATACTAAGACCTGGTTTGCCTATCAGTGAGATGGCTGTGTCAGAGCTTCCTGGTGTACCGAGTGCTGTCTGGACAGTGAAAAAGAAGGTGACTGATGAGTTTGATGCATACATTGTGGTGTCATTTGAAAATGCTACTCTTGTGCTTTCAATTGGTGAGACAATCAAAGAAGTTAATGACAGTGGTTTTCTTGATACTACCCCTTCACTTGCCGTGTCTTTGATAGGTGATGATGCTCTCATGCAAGTTCACCCAAATGGCATTAGGCATATTAGGGAAGGTGGACGTATCAATGAATGGAGAACTCCTGGAAAGAGAACGATTATAATGGTTGGCTCTAATAGACTTCAGGTGGTCATTGCTTTGAGTGGAGGAGAACTTATATACTTTGAGGTTGATATGACTGGTCAACTGGTGGAGGTTGAGAAGCATGAATTGTCTGGAGATGTAGCTTGTCTGGACATTGCCCCAGTACCTGAAGGGAGACAAAGATCTCGTTTCCTTGCAGTTGGCTCATATGACAACACGATTCGTATTTTGTCATTGGATCCTGATGACAGTATGCGGATTCTGAGTGTTCAAAGTGTCTCTTCAATTCCAGAATCTCTCCTCTTTCTTGAGGCTCAGGCATCAGTTAGTGGTGAGGATGGTGCGGATCATCCTGCCCACCTTTTCCTTTATGCCGGTCTACGAACTGGGATTTTGTTCAGAACAGTGGTGGATATGGTGACAGGTCAGCTTTCTGATTCCCATTCCCGATTCTTAGGACTAAGAGCTCCTAAGCTATTTTCTATTAATATAAGAGGCAAGCATGCCATGCTTTGTTTGTCAAGTCAGCCCTGGCTTGGTTATATTCATGAAGGACATTTTCTGTTAACACCACTATCGTATGAGACTCTTGAATATGCGGCCTCATTTTCATCTGATCAATGTGCGGAAGGTGTAGTTGCTGTTGCTGGCAGTTCTTTGAGGGTTTTTACTATCGAAAGATTGGGAGAAACATTTAATGAAACTGTGATTCCTCTGAGGTACACCCCTAGAAAGTTTGTGGTTCAAGTGAAACGAAAGCTTTTGGTAATTATTGAAAGTGATCAAGGAGCATTCACAGCAGAAGAGCGTAAAACTGCAAAAAGGAAAACTAGGAAGGATGTTGATGAAGATTTCTCTCCACCAAGGAAGCGTAGGAACAGTAGTAGCAATGGTGGTGCAGATCTTTCTCCACCAAAGGAGTGCTTTGAGGCTGCAGAAATAGGTGAAAAAAGAAATGGTAATGTGGAGCAGATGGAAAATGATGATAATGAGGATGATCCCCTCTCTGATGAGCACTATGGCTATCCCAAGGCAGAGTCTGACAAATGGGTTTCTTGCATTAGAGTTCTTGACCCAAAGACAGCAACTACAACTTGTTTGCTGGAGCTCGATAACGAAGCTGCAATCAGTGTATGTACAGTGAATTTTCATGATAACGCCGGCCTGGTTGGGGCAGCTCCTCCGAAGGAGTATGGTACGCTTTTGGCTGTTGGAACCGCAAAGGGACTTCAATTTTGGCCCAAGAAAAGTATAACCGGAGGATTTATTCATATATATCGATTTCTTGATGATGGAAAGTCCCTTGAACTTTTGCACAAAACAGAAGTGGATGGTGTTCCTCTTGCTTTATGTCAGTTTCAGGGAAGGTTAATAGCAGGGATAGGATCAGTGCTCAGACTATATGATTTGGGGAGAAAAAGATTGCTTAGGAAATGTGAGAATAAGCTGTTTCCCAACAATATTGTATCCATTCACACCTATCGTGATCGAATATATGTAGGTGACATTCAAGAGTCATTCCACTACTGCAAGTATAGGCGGGATGAGAATCAGCTGTATATATTTGCTGATGATCGTGTTCCAAGATGGCTGACAGCATCGTTCCATATTGATTTTGACACGATGGCAGGTGCGGACAAGTTTGGGAATGTGTACTTTGTGCGGTTACCACAGGATGTTTCAGATGGGATAGAAGAAGATCCAACAGGTGGGAGGATAAAATGGAAGCAGGGGAAGTTGAATGGTGCTCCAAACAAAGTGGAGGAGATCGTGCAGTTTCATGTTGGCGATGTAGTCAGCTGCTTGCAGAAGGCATCTCTCATTCCAGGTGGCAGTGAGTGCATCATTTATGGGACAGTGATGGGTAGCTTGGGTGCATTGTTTGCATTCACTTCCCGTGATGACGTTGACTTCTTTTCTCACCTGGAGATGTATATGAGGCAGGAACATCCACCCTTGTGTGGGAGAGATCACATGGCTTATAGATCAGCTTATTTCCCGGTTAAGGATGTGATTGATGGAGATCTTTGCGAGCAGTACCCAACACTGCCTATGGATGTACAGAGGAAAATTGCAGTCGAGTTGGATAGGACTCCTGGAGAGATACTAAGGAAACTTGAGGAAATTCGAAATAAGATCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000166 GO:0000278 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005886 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008289 GO:0008360 GO:0008361 GO:0009898 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0015629 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0019897 GO:0019898 GO:0022402 GO:0022603 GO:0022604 GO:0023052 GO:0030307 GO:0030427 GO:0030554 GO:0030863 GO:0030864 GO:0031234 GO:0031567 GO:0031569 GO:0032153 GO:0032155 GO:0032465 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032878 GO:0032879 GO:0032880 GO:0032954 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0035091 GO:0035556 GO:0035639 GO:0035839 GO:0036094 GO:0036211 GO:0040008 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044087 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0045786 GO:0045927 GO:0045930 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051285 GO:0051286 GO:0051302 GO:0051493 GO:0051510 GO:0051512 GO:0051516 GO:0051518 GO:0051519 GO:0051641 GO:0051716 GO:0051726 GO:0060341 GO:0065007 GO:0065008 GO:0070727 GO:0070938 GO:0071342 GO:0071704 GO:0071840 GO:0071944 GO:0072395 GO:0072413 GO:0072453 GO:0072471 GO:0090066 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0099568 GO:0099738 GO:0120105 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901648 GO:1901981 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902412 GO:1902471 GO:1902749 GO:1902750 GO:1903047 GO:1903066 GO:1903067 GO:1903076 GO:1903077 GO:1903436 GO:1903505 GO:1903827 GO:1903828 GO:1904375 GO:1904376 GO:1905475 GO:1905476 GO:2000073 GO:2000769
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

1248

Amino Acids

138.66

Weight (kDa)

5.53

Isoelectric Point (pI)

36.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_RSE1_1st PF10433 14 - 364 1.5e-115 RSE1/DDB1/CPSF1 first beta-propeller
Beta-prop_RSE1_2nd PF23726 439 - 759 5.4e-83 RSE1/DDB1/CPSF1 second beta-propeller
CPSF_A PF03178 886 - 1214 5.7e-93 CPSF A subunit region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 762, 858, 1619
AarI CACCTGC 1 cut(s) 3221
AasI GACNNNNNNGTC 3 cut(s) 230, 460, 1217
Acc16I TGCGCA 1 cut(s) 822
Acc36I ACCTGC 1 cut(s) 3221
AccB1I GGYRCC 2 cut(s) 176, 700
AccB7I CCANNNNNTGG 1 cut(s) 3311
AccI GTMKAC 1 cut(s) 1981
AccII CGCG 2 cut(s) 30, 32
AclWI GGATC 9 cut(s) 139, 582, 1073, 1835, 1848, 1956, 2594, 2995, 3296
AcoI YGGCCR 2 cut(s) 250, 1267
AcsI RAATTY 7 cut(s) 168, 300, 685, 748, 1006, 2746, 3726
AcuI CTGAAG 4 cut(s) 884, 1140, 1625, 1791
AcyI GRCGYC 2 cut(s) 177, 1199
AfiI CCNNNNNNNGG 7 cut(s) 710, 2138, 2773, 3311, 3563, 3564, 3607
AflII CTTAAG 1 cut(s) 1160
AgeI ACCGGT 1 cut(s) 137
AleI CACNNNNGTG 1 cut(s) 3559
Alw21I GWGCWC 5 cut(s) 2071, 2619, 2712, 2997, 3352
Alw26I GTCTC 9 cut(s) 20, 305, 489, 949, 1225, 1445, 1771, 1885, 2180
AlwI GGATC 9 cut(s) 139, 582, 1073, 1835, 1848, 1956, 2594, 2995, 3296
AlwNI CAGNNNCTG 2 cut(s) 1769, 2642
AoxI GGCC 6 cut(s) 250, 719, 1267, 2202, 2764, 2840
ApeKI GCWGC 9 cut(s) 545, 823, 848, 1012, 1025, 2534, 2723, 2777, 3402
ApoI RAATTY 7 cut(s) 168, 300, 685, 748, 1006, 2746, 3726
ArsI GACNNNNNNTTYG 2 cut(s) 2820, 2852
AseI ATTAAT 1 cut(s) 2088
AsiGI ACCGGT 1 cut(s) 137
AspA2I CCTAGG 1 cut(s) 800
AspLEI GCGC 5 cut(s) 30, 32, 50, 179, 823
AspS9I GGNCC 4 cut(s) 109, 719, 1274, 2841
AsuC2I CCSGG 3 cut(s) 348, 705, 3602
AsuII TTCGAA 1 cut(s) 3730
AvaII GGWCC 2 cut(s) 109, 1274
AvrII CCTAGG 1 cut(s) 800
BamHI GGATCC 1 cut(s) 1840
BanI GGYRCC 2 cut(s) 176, 700
BanII GRGCYC 2 cut(s) 2071, 2712
BarI GAAGNNNNNNTAC 4 cut(s) 404, 436, 947, 979
Bbv12I GWGCWC 5 cut(s) 2071, 2619, 2712, 2997, 3352
BbvCI CCTCAGC 1 cut(s) 1099
BbvI GCAGC 9 cut(s) 532, 835, 860, 1012, 1024, 2521, 2710, 2789, 3389
BceAI ACGGC 4 cut(s) 73, 77, 451, 1490
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciVI GTATCC 2 cut(s) 1287, 3079
BclI TGATCA 4 cut(s) 664, 1180, 2218, 2383
BcnI CCSGG 3 cut(s) 348, 705, 3602
BcoDI GTCTC 9 cut(s) 20, 305, 489, 949, 1225, 1445, 1771, 1885, 2180
BfaI CTAG 6 cut(s) 266, 416, 801, 1152, 2331, 2433
BfmI CTRYAG 3 cut(s) 10, 492, 2535
BfoI RGCGCY 1 cut(s) 180
BfrI CTTAAG 1 cut(s) 1160
BfuAI ACCTGC 1 cut(s) 3221
BfuI GTATCC 2 cut(s) 1287, 3079
BglII AGATCT 3 cut(s) 1784, 2503, 3625
BlnI CCTAGG 1 cut(s) 800
BmcAI AGTACT 2 cut(s) 356, 965
Bme18I GGWCC 2 cut(s) 109, 1274
BmgT120I GGNCC 4 cut(s) 109, 719, 1274, 2841
BmiI GGNNCC 8 cut(s) 178, 214, 241, 397, 702, 1275, 1842, 2818
BmrI ACTGGG 3 cut(s) 974, 1757, 1998
BmsI GCATC 6 cut(s) 1387, 1516, 1931, 3209, 3425, 3453
BmuI ACTGGG 3 cut(s) 974, 1757, 1998
BplI GAGNNNNNCTC 2 cut(s) 1082, 1114
BpmI CTGGAG 5 cut(s) 8, 1755, 2726, 3548, 3720
Bpu10I CCTNAGC 4 cut(s) 1099, 1917, 2073, 3029
Bpu14I TTCGAA 1 cut(s) 3730
BpuEI CTTGAG 2 cut(s) 1931, 3740
BpuMI CCSGG 3 cut(s) 348, 705, 3602
Bsa29I ATCGAT 1 cut(s) 2881
BsaBI GATNNNNATC 2 cut(s) 3150, 3624
BsaHI GRCGYC 2 cut(s) 177, 1199
BsaI GGTCTC 2 cut(s) 305, 1225
BsaJI CCNNGG 5 cut(s) 800, 1270, 2132, 2465, 2631
BsaWI WCCGGW 3 cut(s) 137, 326, 2858
BsaXI ACNNNNNCTCC 2 cut(s) 720, 750
Bsc4I CCNNNNNNNGG 7 cut(s) 710, 2138, 2773, 3311, 3563, 3564, 3607
Bse118I RCCGGY 4 cut(s) 137, 209, 1976, 2762
Bse1I ACTGG 5 cut(s) 980, 1702, 1710, 1763, 1993
Bse3DI GCAATG 3 cut(s) 1650, 1755, 2497
Bse8I GATNNNNATC 2 cut(s) 3150, 3624
BseCI ATCGAT 1 cut(s) 2881
BseDI CCNNGG 5 cut(s) 800, 1270, 2132, 2465, 2631
BseJI GATNNNNATC 2 cut(s) 3150, 3624
BseLI CCNNNNNNNGG 7 cut(s) 710, 2138, 2773, 3311, 3563, 3564, 3607
BseMI GCAATG 3 cut(s) 1650, 1755, 2497
BseMII CTCAG 7 cut(s) 885, 1113, 1303, 1856, 1931, 2309, 3010
BseNI ACTGG 5 cut(s) 980, 1702, 1710, 1763, 1993
BsePI GCGCGC 1 cut(s) 28
BseRI GAGGAG 6 cut(s) 146, 1087, 1680, 1892, 2772, 3380
BseX3I CGGCCG 1 cut(s) 250
BseXI GCAGC 9 cut(s) 532, 835, 860, 1012, 1024, 2521, 2710, 2789, 3389
BsgI GTGCAG 3 cut(s) 762, 2520, 3395
Bsh1236I CGCG 2 cut(s) 30, 32
Bsh1285I CGRYCG 1 cut(s) 253
BshFI GGCC 6 cut(s) 252, 721, 1269, 2204, 2766, 2842
BshNI GGYRCC 2 cut(s) 176, 700
BshTI ACCGGT 1 cut(s) 137
BshVI ATCGAT 1 cut(s) 2881
BsiEI CGRYCG 1 cut(s) 253
BsiHKAI GWGCWC 5 cut(s) 2071, 2619, 2712, 2997, 3352
BslFI GGGAC 4 cut(s) 786, 2841, 2887, 3469
BslI CCNNNNNNNGG 7 cut(s) 710, 2138, 2773, 3311, 3563, 3564, 3607
BsmAI GTCTC 9 cut(s) 20, 305, 489, 949, 1225, 1445, 1771, 1885, 2180
BsmFI GGGAC 4 cut(s) 786, 2841, 2887, 3469
BsmI GAATGC 2 cut(s) 2393, 3488
BsnI GGCC 6 cut(s) 252, 721, 1269, 2204, 2766, 2842
Bso31I GGTCTC 2 cut(s) 305, 1225
Bsp119I TTCGAA 1 cut(s) 3730
Bsp1286I GDGCHC 5 cut(s) 2071, 2619, 2712, 2997, 3352
Bsp1407I TGTACA 3 cut(s) 420, 2738, 3661
BspANI GGCC 6 cut(s) 252, 721, 1269, 2204, 2766, 2842
BspCNI CTCAG 7 cut(s) 886, 1112, 1302, 1857, 1930, 2310, 3009
BspDI ATCGAT 1 cut(s) 2881
BspFNI CGCG 2 cut(s) 30, 32
BspHI TCATGA 2 cut(s) 2149, 2752
BspLI GGNNCC 8 cut(s) 178, 214, 241, 397, 702, 1275, 1842, 2818
BspMAI CTGCAG 1 cut(s) 2539
BspMI ACCTGC 1 cut(s) 3221
BspPI GGATC 9 cut(s) 139, 582, 1073, 1835, 1848, 1956, 2594, 2995, 3296
BspQI GCTCTTC 1 cut(s) 2400
BspT104I TTCGAA 1 cut(s) 3730
BspT107I GGYRCC 2 cut(s) 176, 700
BspTI CTTAAG 1 cut(s) 1160
BspTNI GGTCTC 2 cut(s) 305, 1225
BsrDI GCAATG 3 cut(s) 1650, 1755, 2497
BsrFI RCCGGY 4 cut(s) 137, 209, 1976, 2762
BsrGI TGTACA 3 cut(s) 420, 2738, 3661
BsrI ACTGG 5 cut(s) 980, 1702, 1710, 1763, 1993
BssAI RCCGGY 4 cut(s) 137, 209, 1976, 2762
BssECI CCNNGG 5 cut(s) 800, 1270, 2132, 2465, 2631
BssHII GCGCGC 1 cut(s) 28
BssNI GRCGYC 2 cut(s) 177, 1199
BssT1I CCWWGG 3 cut(s) 800, 2465, 2631
Bst4CI ACNGT 9 cut(s) 14, 1369, 1475, 1853, 2008, 2308, 2483, 2743, 3460
Bst6I CTCTTC 3 cut(s) 1116, 1888, 2400
BstACI GRCGYC 2 cut(s) 177, 1199
BstAFI CTTAAG 1 cut(s) 1160
BstAPI GCANNNNNTGC 4 cut(s) 45, 2110, 3441, 3485
BstAUI TGTACA 3 cut(s) 420, 2738, 3661
BstBI TTCGAA 1 cut(s) 3730
BstC8I GCNNGC 9 cut(s) 30, 807, 819, 2102, 2106, 2251, 2764, 3407, 3635
BstEII GGTNACC 1 cut(s) 3267
BstFNI CGCG 2 cut(s) 30, 32
BstH2I RGCGCY 1 cut(s) 180
BstHHI GCGC 5 cut(s) 30, 32, 50, 179, 823
BstMAI GTCTC 9 cut(s) 20, 305, 489, 949, 1225, 1445, 1771, 1885, 2180
BstMCI CGRYCG 1 cut(s) 253
BstMWI GCNNNNNNNGC 7 cut(s) 36, 45, 823, 2110, 2399, 3441, 3485
BstNSI RCATGY 1 cut(s) 2108
BstPI GGTNACC 1 cut(s) 3267
BstSFI CTRYAG 3 cut(s) 10, 492, 2535
BstUI CGCG 2 cut(s) 30, 32
BstV1I GCAGC 9 cut(s) 532, 835, 860, 1012, 1024, 2521, 2710, 2789, 3389
BstX2I RGATCY 7 cut(s) 144, 1078, 1784, 1840, 2503, 3301, 3625
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 7 cut(s) 144, 1078, 1784, 1840, 2503, 3301, 3625
BstZI CGGCCG 1 cut(s) 250
Bsu15I ATCGAT 1 cut(s) 2881
BsuI GTATCC 2 cut(s) 1287, 3079
BsuRI GGCC 6 cut(s) 252, 721, 1269, 2204, 2766, 2842
BsuTUI ATCGAT 1 cut(s) 2881
BtgZI GCGATG 1 cut(s) 3405
BtsI GCAGTG 2 cut(s) 3442, 3647
BveI ACCTGC 1 cut(s) 3221
Cac8I GCNNGC 9 cut(s) 30, 807, 819, 2102, 2106, 2251, 2764, 3407, 3635
CaiI CAGNNNCTG 2 cut(s) 1769, 2642
CciI TCATGA 2 cut(s) 2149, 2752
CfoI GCGC 5 cut(s) 30, 32, 50, 179, 823
Cfr10I RCCGGY 4 cut(s) 137, 209, 1976, 2762
Cfr13I GGNCC 4 cut(s) 109, 719, 1274, 2841
ClaI ATCGAT 1 cut(s) 2881
CseI GACGC 1 cut(s) 1207
CsiI ACCWGGT 1 cut(s) 1303
CspAI ACCGGT 1 cut(s) 137
CspCI CAANNNNNGTGG 2 cut(s) 3342, 3377
DinI GGCGCC 1 cut(s) 178
DrdI GACNNNNNNGTC 3 cut(s) 230, 460, 1217
DseDI GACNNNNNNGTC 3 cut(s) 230, 460, 1217
EaeI YGGCCR 2 cut(s) 250, 1267
EagI CGGCCG 1 cut(s) 250
Eam1104I CTCTTC 3 cut(s) 1116, 1888, 2400
EarI CTCTTC 3 cut(s) 1116, 1888, 2400
EciI GGCGGA 1 cut(s) 113
Ecl136II GAGCTC 2 cut(s) 2069, 2710
EclXI CGGCCG 1 cut(s) 250
Eco130I CCWWGG 3 cut(s) 800, 2465, 2631
Eco24I GRGCYC 2 cut(s) 2071, 2712
Eco31I GGTCTC 2 cut(s) 305, 1225
Eco47I GGWCC 2 cut(s) 109, 1274
Eco52I CGGCCG 1 cut(s) 250
Eco53kI GAGCTC 2 cut(s) 2069, 2710
Eco57I CTGAAG 4 cut(s) 884, 1140, 1625, 1791
Eco91I GGTNACC 1 cut(s) 3267
EcoICRI GAGCTC 2 cut(s) 2069, 2710
EcoO109I RGGNCCY 2 cut(s) 109, 1274
EcoO65I GGTNACC 1 cut(s) 3267
EcoRI GAATTC 1 cut(s) 1006
EcoT14I CCWWGG 3 cut(s) 800, 2465, 2631
EcoT22I ATGCAT 1 cut(s) 1402
EcoT38I GRGCYC 2 cut(s) 2071, 2712
EgeI GGCGCC 1 cut(s) 178
EheI GGCGCC 1 cut(s) 178
ErhI CCWWGG 3 cut(s) 800, 2465, 2631
FalI AAGNNNNNCTT 4 cut(s) 1867, 1899, 2510, 2542
FaqI GGGAC 4 cut(s) 786, 2841, 2887, 3469
FauI CCCGC 1 cut(s) 3135
FauNDI CATATG 1 cut(s) 1810
FbaI TGATCA 4 cut(s) 664, 1180, 2218, 2383
FblI GTMKAC 1 cut(s) 1981
FriOI GRGCYC 2 cut(s) 2071, 2712
FspBI CTAG 6 cut(s) 266, 416, 801, 1152, 2331, 2433
FspI TGCGCA 1 cut(s) 822
GlaI GCGC 5 cut(s) 29, 31, 49, 178, 822
GsuI CTGGAG 5 cut(s) 8, 1755, 2726, 3548, 3720
HaeII RGCGCY 1 cut(s) 180
HaeIII GGCC 6 cut(s) 252, 721, 1269, 2204, 2766, 2842
HgaI GACGC 1 cut(s) 1207
HhaI GCGC 5 cut(s) 30, 32, 50, 179, 823
Hin1I GRCGYC 2 cut(s) 177, 1199
Hin6I GCGC 5 cut(s) 28, 30, 48, 177, 821
HinP1I GCGC 5 cut(s) 28, 30, 48, 177, 821
HincII GTYRAC 5 cut(s) 367, 453, 1703, 2169, 3511
HindII GTYRAC 5 cut(s) 367, 453, 1703, 2169, 3511
HindIII AAGCTT 1 cut(s) 2360
HpaI GTTAAC 1 cut(s) 2169
Hpy99I CGWCG 5 cut(s) 37, 98, 134, 239, 466
HpyCH4III ACNGT 9 cut(s) 14, 1369, 1475, 1853, 2008, 2308, 2483, 2743, 3460
HpyCH4IV ACGT 2 cut(s) 1579, 3507
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 45, 823, 2110, 2399, 3441, 3485
HpySE526I ACGT 2 cut(s) 1579, 3507
Hsp92I GRCGYC 2 cut(s) 177, 1199
HspAI GCGC 5 cut(s) 28, 30, 48, 177, 821
KasI GGCGCC 1 cut(s) 176
KroI GCCGGC 1 cut(s) 2762
KroNI GCCGGC 1 cut(s) 2764
Ksp22I TGATCA 4 cut(s) 664, 1180, 2218, 2383
KspAI GTTAAC 1 cut(s) 2169
LguI GCTCTTC 1 cut(s) 2400
Lsp1109I GCAGC 9 cut(s) 532, 835, 860, 1012, 1024, 2521, 2710, 2789, 3389
LweI GCATC 6 cut(s) 1387, 1516, 1931, 3209, 3425, 3453
MabI ACCWGGT 1 cut(s) 1303
MaeI CTAG 6 cut(s) 266, 416, 801, 1152, 2331, 2433
MaeII ACGT 2 cut(s) 1579, 3507
MaeIII GTNAC 7 cut(s) 610, 916, 982, 1381, 2020, 3104, 3267
MfeI CAATTG 1 cut(s) 1443
MflI RGATCY 7 cut(s) 144, 1078, 1784, 1840, 2503, 3301, 3625
MhlI GDGCHC 5 cut(s) 2071, 2619, 2712, 2997, 3352
Mly113I GGCGCC 1 cut(s) 177
MlyI GAGTC 6 cut(s) 145, 1100, 2182, 2648, 3125, 3688
MmeI TCCRAC 7 cut(s) 373, 450, 552, 1171, 2794, 3329, 3666
Mph1103I ATGCAT 1 cut(s) 1402
MroNI GCCGGC 1 cut(s) 2762
MseI TTAA 9 cut(s) 639, 1161, 1467, 2088, 2168, 2298, 2972, 3606, 3745
MslI CAYNNNNRTG 4 cut(s) 933, 1409, 1548, 3559
MspA1I CMGCKG 2 cut(s) 3157, 3402
MspCI CTTAAG 1 cut(s) 1160
MunI CAATTG 1 cut(s) 1443
Mva1269I GAATGC 2 cut(s) 2393, 3488
MvnI CGCG 2 cut(s) 30, 32
MwoI GCNNNNNNNGC 7 cut(s) 36, 45, 823, 2110, 2399, 3441, 3485
NaeI GCCGGC 1 cut(s) 2764
NarI GGCGCC 1 cut(s) 177
NciI CCSGG 3 cut(s) 348, 705, 3602
NdeI CATATG 1 cut(s) 1810
NgoMIV GCCGGC 1 cut(s) 2762
NlaIV GGNNCC 8 cut(s) 178, 214, 241, 397, 702, 1275, 1842, 2818
NmeAIII GCCGAG 1 cut(s) 747
NmuCI GTSAC 6 cut(s) 610, 916, 982, 1381, 2020, 3104
NsbI TGCGCA 1 cut(s) 822
NsiI ATGCAT 1 cut(s) 1402
NspI RCATGY 1 cut(s) 2108
NspV TTCGAA 1 cut(s) 3730
OliI CACNNNNGTG 1 cut(s) 3559
PaeI GCATGC 1 cut(s) 2108
PagI TCATGA 2 cut(s) 2149, 2752
PaqCI CACCTGC 1 cut(s) 3221
PauI GCGCGC 1 cut(s) 28
PciSI GCTCTTC 1 cut(s) 2400
PcsI WCGNNNNNNNCGW 1 cut(s) 240
PctI GAATGC 2 cut(s) 2393, 3488
PdiI GCCGGC 1 cut(s) 2764
PflMI CCANNNNNTGG 1 cut(s) 3311
PfoI TCCNGGA 2 cut(s) 1600, 3697
PinAI ACCGGT 1 cut(s) 137
PleI GAGTC 6 cut(s) 145, 1099, 2182, 2647, 3124, 3688
PluTI GGCGCC 1 cut(s) 180
PpsI GAGTC 6 cut(s) 145, 1099, 2182, 2647, 3124, 3688
PpuMI RGGWCCY 2 cut(s) 109, 1274
PshBI ATTAAT 1 cut(s) 2088
PsiI TTATAA 3 cut(s) 762, 858, 1619
Psp124BI GAGCTC 2 cut(s) 2071, 2712
Psp5II RGGWCCY 2 cut(s) 109, 1274
PspEI GGTNACC 1 cut(s) 3267
PspN4I GGNNCC 8 cut(s) 178, 214, 241, 397, 702, 1275, 1842, 2818
PspPI GGNCC 4 cut(s) 109, 719, 1274, 2841
PspPPI RGGWCCY 2 cut(s) 109, 1274
PstI CTGCAG 1 cut(s) 2539
PstNI CAGNNNCTG 2 cut(s) 1769, 2642
PsuI RGATCY 7 cut(s) 144, 1078, 1784, 1840, 2503, 3301, 3625
PteI GCGCGC 1 cut(s) 28
PvuII CAGCTG 2 cut(s) 3157, 3402
RseI CAYNNNNRTG 4 cut(s) 933, 1409, 1548, 3559
SacI GAGCTC 2 cut(s) 2071, 2712
SapI GCTCTTC 1 cut(s) 2400
SaqAI TTAA 9 cut(s) 639, 1161, 1467, 2088, 2168, 2298, 2972, 3606, 3745
Sau96I GGNCC 4 cut(s) 109, 719, 1274, 2841
ScaI AGTACT 2 cut(s) 356, 965
SchI GAGTC 6 cut(s) 145, 1100, 2182, 2648, 3125, 3688
SduI GDGCHC 5 cut(s) 2071, 2619, 2712, 2997, 3352
SexAI ACCWGGT 1 cut(s) 1303
SfaNI GCATC 6 cut(s) 1387, 1516, 1931, 3209, 3425, 3453
SfcI CTRYAG 3 cut(s) 10, 492, 2535
SfoI GGCGCC 1 cut(s) 178
SfuI TTCGAA 1 cut(s) 3730
SinI GGWCC 2 cut(s) 109, 1274
SmiMI CAYNNNNRTG 4 cut(s) 933, 1409, 1548, 3559
SmlI CTYRAG 3 cut(s) 1160, 1910, 3719
SmoI CTYRAG 3 cut(s) 1160, 1910, 3719
SphI GCATGC 1 cut(s) 2108
SspDI GGCGCC 1 cut(s) 176
SspI AATATT 2 cut(s) 1254, 3064
SspMI CTAG 6 cut(s) 266, 416, 801, 1152, 2331, 2433
SstI GAGCTC 2 cut(s) 2071, 2712
StyI CCWWGG 3 cut(s) 800, 2465, 2631
TaaI ACNGT 9 cut(s) 14, 1369, 1475, 1853, 2008, 2308, 2483, 2743, 3460
TaiI ACGT 2 cut(s) 1582, 3510
TaqI TCGA 9 cut(s) 114, 503, 584, 2277, 2712, 2881, 3091, 3681, 3730
TatI WGTACW 6 cut(s) 354, 420, 963, 2738, 3255, 3661
TauI GCSGC 2 cut(s) 1269, 2204
Tru1I TTAA 9 cut(s) 639, 1161, 1467, 2088, 2168, 2298, 2972, 3606, 3745
Tru9I TTAA 9 cut(s) 639, 1161, 1467, 2088, 2168, 2298, 2972, 3606, 3745
TseFI GTSAC 6 cut(s) 610, 916, 982, 1381, 2020, 3104
TseI GCWGC 9 cut(s) 545, 823, 848, 1012, 1025, 2534, 2723, 2777, 3402
Tsp45I GTSAC 6 cut(s) 610, 916, 982, 1381, 2020, 3104
TspGWI ACGGA 3 cut(s) 151, 186, 1223
Van91I CCANNNNNTGG 1 cut(s) 3311
Vha464I CTTAAG 1 cut(s) 1160
VpaK11BI GGWCC 2 cut(s) 109, 1274
VspI ATTAAT 1 cut(s) 2088
XapI RAATTY 7 cut(s) 168, 300, 685, 748, 1006, 2746, 3726
XceI RCATGY 1 cut(s) 2108
XmaJI CCTAGG 1 cut(s) 800
XmiI GTMKAC 1 cut(s) 1981
XspI CTAG 6 cut(s) 266, 416, 801, 1152, 2331, 2433
ZrmI AGTACT 2 cut(s) 356, 965
Zsp2I ATGCAT 1 cut(s) 1402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.