Rroxscaffold_4G00287350

Dual specificity tyrosine-phosphorylation-regulated kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0006817
Physical Location & Seq
Reverse (-)
8376172 .. 8380544
4373 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00287350.1

Sequence Viewer

Length: 783 bp
ATGGCGGTCTCGGACGTCGAGGCAGTGCTCGAATTCTTGAAGAAAAACGGGTTTTCCGCGGCAGAGTCTGCACTGAAAGAGGACATGATTGAAAAGGGCGATCTGGGTTCTTTTGATTATGAGAAATTCTTGTTTCCGATGGTGCCTGCGCCGCCTCCGGTGAGAATTCCGGCGAGTTTTCAGAGATCGAAGGTTCCGGGTCTGGTTGAAGTCTCGAGCTCGCGATCGAGCTCCGGGGATGATGAGTTTGTGAGCGTCGGTTCTTCTAGTACTAATAGGTGCTCTTCAGAATTTACAAATCCATATGGAATTCGATCTACATCTCCAGGCAGTTCCAAGGCTTCATCTGATAGATTCTCACAATTTGGCACCGCACGCGATTACCATGATTTTGATATGCAAAATGACTTGTTCTGGCATGATGAGAAAGATGATGCAGACTTCATGACTCCTTGCTTTGACGGGGTAGATTTCTTTGGCTGTCCCACTGAGGATAAGTTCATCATGACTTCAGACACTGACAAAAAAAACGAGGACCTGCTGGGTCTGCATCATAAATCTGAAGCCTTTCGATCAGAAATAAGCGTTGATTACTTGGACAAGAAATGTCTTACTAATATTTCTTCCACGGATGCCAAAGGTGTTTGTGTGACAGACTACTGTCAGTTTGAAATGAAACACCAGCTTGAAGGAGGCTCTGAGGAGGAGCCTGCTGGTGAAAAGTTGAAAGAAACTGATTTGGATATCTCCCATGTGAATGTTTTGGGGGGTTTCCTTCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000166 GO:0000278 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005886 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008289 GO:0008360 GO:0008361 GO:0009898 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0015629 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0019897 GO:0019898 GO:0022402 GO:0022603 GO:0022604 GO:0023052 GO:0030307 GO:0030427 GO:0030554 GO:0030863 GO:0030864 GO:0031234 GO:0031567 GO:0031569 GO:0032153 GO:0032155 GO:0032465 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032878 GO:0032879 GO:0032880 GO:0032954 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0035091 GO:0035556 GO:0035639 GO:0035839 GO:0036094 GO:0036211 GO:0040008 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044087 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0045786 GO:0045927 GO:0045930 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051285 GO:0051286 GO:0051302 GO:0051493 GO:0051510 GO:0051512 GO:0051516 GO:0051518 GO:0051519 GO:0051641 GO:0051716 GO:0051726 GO:0060341 GO:0065007 GO:0065008 GO:0070727 GO:0070938 GO:0071342 GO:0071704 GO:0071840 GO:0071944 GO:0072395 GO:0072413 GO:0072453 GO:0072471 GO:0090066 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0099568 GO:0099738 GO:0120105 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901648 GO:1901981 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902412 GO:1902471 GO:1902749 GO:1902750 GO:1903047 GO:1903066 GO:1903067 GO:1903076 GO:1903077 GO:1903436 GO:1903505 GO:1903827 GO:1903828 GO:1904375 GO:1904376 GO:1905475 GO:1905476 GO:2000073 GO:2000769
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

260

Amino Acids

28.76

Weight (kDa)

4.54

Isoelectric Point (pI)

41.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 18
Acc36I ACCTGC 1 cut(s) 546
AccB1I GGYRCC 2 cut(s) 142, 368
AccII CGCG 3 cut(s) 59, 223, 378
AciI CCGC 5 cut(s) 5, 57, 59, 152, 372
AcsI RAATTY 5 cut(s) 32, 125, 165, 290, 309
AcuI CTGAAG 3 cut(s) 270, 495, 582
AcyI GRCGYC 1 cut(s) 15
AfaI GTAC 1 cut(s) 271
AgsI TTSAA 6 cut(s) 40, 92, 209, 671, 689, 727
AjnI CCWGG 1 cut(s) 325
AluBI AGCT 3 cut(s) 219, 231, 685
AluI AGCT 3 cut(s) 219, 231, 685
Alw21I GWGCWC 4 cut(s) 30, 221, 233, 284
Alw26I GTCTC 2 cut(s) 13, 217
AlwNI CAGNNNCTG 2 cut(s) 68, 518
Ama87I CYCGRG 1 cut(s) 214
ApoI RAATTY 5 cut(s) 32, 125, 165, 290, 309
Asp700I GAANNNNTTC 1 cut(s) 567
AspLEI GCGC 1 cut(s) 151
AspS9I GGNCC 1 cut(s) 535
AsuC2I CCSGG 2 cut(s) 198, 235
AsuHPI GGTGA 2 cut(s) 172, 728
AvaI CYCGRG 1 cut(s) 214
AvaII GGWCC 1 cut(s) 535
BanI GGYRCC 2 cut(s) 142, 368
BanII GRGCYC 2 cut(s) 221, 233
Bbv12I GWGCWC 4 cut(s) 30, 221, 233, 284
BccI CCATC 1 cut(s) 133
BciT130I CCWGG 1 cut(s) 327
BcnI CCSGG 2 cut(s) 198, 235
BcoDI GTCTC 2 cut(s) 13, 217
BfaI CTAG 1 cut(s) 267
BfuAI ACCTGC 1 cut(s) 546
BisI GCNGC 2 cut(s) 60, 152
BlsI GCNGC 2 cut(s) 61, 153
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 3 cut(s) 198, 235, 327
Bme18I GGWCC 1 cut(s) 535
BmeT110I CYCGRG 1 cut(s) 214
BmgT120I GGNCC 1 cut(s) 535
BmiI GGNNCC 4 cut(s) 144, 195, 370, 708
BmrFI CCNGG 3 cut(s) 198, 235, 327
BmsI GCATC 3 cut(s) 424, 559, 622
BoxI GACNNNNGTC 1 cut(s) 660
BpmI CTGGAG 1 cut(s) 309
BpuMI CCSGG 2 cut(s) 198, 235
BsaBI GATNNNNATC 1 cut(s) 319
BsaHI GRCGYC 1 cut(s) 15
BsaI GGTCTC 1 cut(s) 13
BsaJI CCNNGG 4 cut(s) 57, 234, 336, 627
BsaWI WCCGGW 1 cut(s) 157
Bse8I GATNNNNATC 1 cut(s) 319
BseBI CCWGG 1 cut(s) 327
BseDI CCNNGG 4 cut(s) 57, 234, 336, 627
BseGI GGATG 2 cut(s) 244, 637
BseJI GATNNNNATC 1 cut(s) 319
BseMII CTCAG 2 cut(s) 480, 690
BseRI GAGGAG 2 cut(s) 716, 719
BseYI CCCAGC 1 cut(s) 541
BsgI GTGCAG 1 cut(s) 54
Bsh1236I CGCG 3 cut(s) 59, 223, 378
Bsh1285I CGRYCG 1 cut(s) 227
BshNI GGYRCC 2 cut(s) 142, 368
BsiEI CGRYCG 1 cut(s) 227
BsiHKAI GWGCWC 4 cut(s) 30, 221, 233, 284
BsiHKCI CYCGRG 1 cut(s) 214
BsiSI CCGG 4 cut(s) 158, 170, 197, 234
BslFI GGGAC 1 cut(s) 468
BsmAI GTCTC 2 cut(s) 13, 217
BsmFI GGGAC 1 cut(s) 468
Bso31I GGTCTC 1 cut(s) 13
BsoBI CYCGRG 1 cut(s) 214
Bsp1286I GDGCHC 4 cut(s) 30, 221, 233, 284
Bsp143I GATC 5 cut(s) 100, 185, 224, 314, 572
Bsp68I TCGCGA 1 cut(s) 223
BspACI CCGC 5 cut(s) 5, 57, 59, 152, 372
BspCNI CTCAG 2 cut(s) 481, 691
BspFNI CGCG 3 cut(s) 59, 223, 378
BspHI TCATGA 2 cut(s) 444, 504
BspLI GGNNCC 4 cut(s) 144, 195, 370, 708
BspMI ACCTGC 1 cut(s) 546
BspQI GCTCTTC 1 cut(s) 289
BspT107I GGYRCC 2 cut(s) 142, 368
BspTNI GGTCTC 1 cut(s) 13
BssECI CCNNGG 4 cut(s) 57, 234, 336, 627
BssMI GATC 5 cut(s) 100, 185, 224, 314, 572
BssNI GRCGYC 1 cut(s) 15
BssT1I CCWWGG 1 cut(s) 336
Bst2UI CCWGG 1 cut(s) 327
Bst4CI ACNGT 1 cut(s) 662
Bst6I CTCTTC 1 cut(s) 289
BstACI GRCGYC 1 cut(s) 15
BstAPI GCANNNNNTGC 1 cut(s) 68
BstC8I GCNNGC 4 cut(s) 147, 221, 376, 711
BstDEI CTNAG 2 cut(s) 489, 699
BstDSI CCRYGG 2 cut(s) 57, 627
BstF5I GGATG 2 cut(s) 244, 637
BstFNI CGCG 3 cut(s) 59, 223, 378
BstHHI GCGC 1 cut(s) 151
BstKTI GATC 5 cut(s) 103, 188, 227, 317, 575
BstMAI GTCTC 2 cut(s) 13, 217
BstMBI GATC 5 cut(s) 100, 185, 224, 314, 572
BstMCI CGRYCG 1 cut(s) 227
BstMWI GCNNNNNNNGC 4 cut(s) 68, 151, 375, 547
BstNI CCWGG 1 cut(s) 327
BstPAI GACNNNNGTC 1 cut(s) 660
BstSCI CCNGG 3 cut(s) 196, 233, 325
BstUI CGCG 3 cut(s) 59, 223, 378
BtgI CCRYGG 2 cut(s) 57, 627
BtsCI GGATG 2 cut(s) 244, 637
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 4 cut(s) 30, 71, 486, 516
BtuMI TCGCGA 1 cut(s) 223
BveI ACCTGC 1 cut(s) 546
Cac8I GCNNGC 4 cut(s) 147, 221, 376, 711
CaiI CAGNNNCTG 2 cut(s) 68, 518
CciI TCATGA 2 cut(s) 444, 504
CfoI GCGC 1 cut(s) 151
Cfr13I GGNCC 1 cut(s) 535
Cfr42I CCGCGG 1 cut(s) 60
CseI GACGC 1 cut(s) 244
Csp6I GTAC 1 cut(s) 270
CviAII CATG 6 cut(s) 85, 386, 419, 445, 505, 752
CviJI RGCY 8 cut(s) 219, 231, 341, 480, 566, 685, 696, 709
CviKI_1 RGCY 8 cut(s) 219, 231, 341, 480, 566, 685, 696, 709
CviQI GTAC 1 cut(s) 270
DdeI CTNAG 2 cut(s) 489, 699
DpnI GATC 5 cut(s) 102, 187, 226, 316, 574
DpnII GATC 5 cut(s) 100, 185, 224, 314, 572
Eam1104I CTCTTC 1 cut(s) 289
EarI CTCTTC 1 cut(s) 289
Ecl136II GAGCTC 2 cut(s) 219, 231
Eco130I CCWWGG 1 cut(s) 336
Eco24I GRGCYC 2 cut(s) 221, 233
Eco31I GGTCTC 1 cut(s) 13
Eco32I GATATC 1 cut(s) 745
Eco47I GGWCC 1 cut(s) 535
Eco53kI GAGCTC 2 cut(s) 219, 231
Eco57I CTGAAG 3 cut(s) 270, 495, 582
Eco88I CYCGRG 1 cut(s) 214
EcoICRI GAGCTC 2 cut(s) 219, 231
EcoO109I RGGNCCY 1 cut(s) 535
EcoRI GAATTC 3 cut(s) 32, 165, 309
EcoRII CCWGG 1 cut(s) 325
EcoRV GATATC 1 cut(s) 745
EcoT14I CCWWGG 1 cut(s) 336
EcoT38I GRGCYC 2 cut(s) 221, 233
ErhI CCWWGG 1 cut(s) 336
FaeI CATG 6 cut(s) 88, 389, 422, 448, 508, 755
FaqI GGGAC 1 cut(s) 468
FatI CATG 6 cut(s) 84, 385, 418, 444, 504, 751
FauNDI CATATG 1 cut(s) 304
Fnu4HI GCNGC 2 cut(s) 60, 152
FokI GGATG 2 cut(s) 251, 644
FriOI GRGCYC 2 cut(s) 221, 233
Fsp4HI GCNGC 2 cut(s) 60, 152
FspBI CTAG 1 cut(s) 267
GlaI GCGC 1 cut(s) 150
GluI GCNGC 2 cut(s) 60, 152
GsaI CCCAGC 1 cut(s) 545
GsuI CTGGAG 1 cut(s) 309
HapII CCGG 4 cut(s) 158, 170, 197, 234
HgaI GACGC 1 cut(s) 244
HhaI GCGC 1 cut(s) 151
Hin1I GRCGYC 1 cut(s) 15
Hin1II CATG 6 cut(s) 88, 389, 422, 448, 508, 755
Hin6I GCGC 1 cut(s) 149
HinP1I GCGC 1 cut(s) 149
HinfI GANTC 3 cut(s) 65, 354, 448
HpaII CCGG 4 cut(s) 158, 170, 197, 234
HphI GGTGA 2 cut(s) 172, 728
Hpy188I TCNGA 9 cut(s) 13, 138, 183, 289, 349, 514, 562, 577, 700
Hpy188III TCNNGA 5 cut(s) 37, 214, 222, 445, 505
Hpy99I CGWCG 2 cut(s) 20, 260
HpyAV CCTTC 2 cut(s) 184, 683
HpyCH4III ACNGT 1 cut(s) 662
HpyCH4IV ACGT 1 cut(s) 15
HpyCH4V TGCA 4 cut(s) 71, 400, 437, 550
HpyF10VI GCNNNNNNNGC 4 cut(s) 68, 151, 375, 547
HpyF3I CTNAG 2 cut(s) 489, 699
HpySE526I ACGT 1 cut(s) 15
Hsp92I GRCGYC 1 cut(s) 15
Hsp92II CATG 6 cut(s) 88, 389, 422, 448, 508, 755
HspAI GCGC 1 cut(s) 149
KspI CCGCGG 1 cut(s) 60
Kzo9I GATC 5 cut(s) 100, 185, 224, 314, 572
LguI GCTCTTC 1 cut(s) 289
LmnI GCTCC 2 cut(s) 236, 706
LweI GCATC 3 cut(s) 424, 559, 622
MaeI CTAG 1 cut(s) 267
MaeII ACGT 1 cut(s) 15
MaeIII GTNAC 1 cut(s) 649
MalI GATC 5 cut(s) 102, 187, 226, 316, 574
MboI GATC 5 cut(s) 100, 185, 224, 314, 572
MboII GAAGA 4 cut(s) 52, 255, 276, 615
MhlI GDGCHC 4 cut(s) 30, 221, 233, 284
MluCI AATT 6 cut(s) 32, 125, 165, 290, 309, 362
MlyI GAGTC 2 cut(s) 74, 442
MnlI CCTC 8 cut(s) 13, 73, 165, 484, 526, 686, 694, 697
MroXI GAANNNNTTC 1 cut(s) 567
MslI CAYNNNNRTG 1 cut(s) 756
MspA1I CMGCKG 1 cut(s) 59
MspI CCGG 4 cut(s) 158, 170, 197, 234
MspR9I CCNGG 3 cut(s) 198, 235, 327
MvaI CCWGG 1 cut(s) 327
MvnI CGCG 3 cut(s) 59, 223, 378
MwoI GCNNNNNNNGC 4 cut(s) 68, 151, 375, 547
NciI CCSGG 2 cut(s) 198, 235
NdeI CATATG 1 cut(s) 304
NdeII GATC 5 cut(s) 100, 185, 224, 314, 572
NlaIII CATG 6 cut(s) 88, 389, 422, 448, 508, 755
NlaIV GGNNCC 4 cut(s) 144, 195, 370, 708
NmuCI GTSAC 1 cut(s) 649
NruI TCGCGA 1 cut(s) 223
PaeR7I CTCGAG 1 cut(s) 214
PagI TCATGA 2 cut(s) 444, 504
PciSI GCTCTTC 1 cut(s) 289
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 1 cut(s) 354
PkrI GCNGC 2 cut(s) 61, 153
Ple19I CGATCG 1 cut(s) 227
PleI GAGTC 2 cut(s) 73, 442
PpsI GAGTC 2 cut(s) 73, 442
PpuMI RGGWCCY 1 cut(s) 535
PshAI GACNNNNGTC 1 cut(s) 660
Psp124BI GAGCTC 2 cut(s) 221, 233
Psp5II RGGWCCY 1 cut(s) 535
Psp6I CCWGG 1 cut(s) 325
PspFI CCCAGC 1 cut(s) 541
PspGI CCWGG 1 cut(s) 325
PspN4I GGNNCC 4 cut(s) 144, 195, 370, 708
PspPI GGNCC 1 cut(s) 535
PspPPI RGGWCCY 1 cut(s) 535
PstNI CAGNNNCTG 2 cut(s) 68, 518
PvuI CGATCG 1 cut(s) 227
RruI TCGCGA 1 cut(s) 223
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
RseI CAYNNNNRTG 1 cut(s) 756
SacI GAGCTC 2 cut(s) 221, 233
SacII CCGCGG 1 cut(s) 60
SapI GCTCTTC 1 cut(s) 289
SatI GCNGC 2 cut(s) 60, 152
Sau3AI GATC 5 cut(s) 100, 185, 224, 314, 572
Sau96I GGNCC 1 cut(s) 535
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 2 cut(s) 74, 442
ScrFI CCNGG 3 cut(s) 198, 235, 327
SduI GDGCHC 4 cut(s) 30, 221, 233, 284
SetI ASST 8 cut(s) 18, 195, 221, 233, 281, 540, 643, 687
SfaNI GCATC 3 cut(s) 424, 559, 622
Sfr274I CTCGAG 1 cut(s) 214
Sfr303I CCGCGG 1 cut(s) 60
SgrBI CCGCGG 1 cut(s) 60
SinI GGWCC 1 cut(s) 535
SlaI CTCGAG 1 cut(s) 214
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 1 cut(s) 214
SmoI CTYRAG 1 cut(s) 214
Sse9I AATT 6 cut(s) 32, 125, 165, 290, 309, 362
SsiI CCGC 5 cut(s) 5, 57, 59, 152, 372
SspI AATATT 1 cut(s) 619
SspMI CTAG 1 cut(s) 267
SstI GAGCTC 2 cut(s) 221, 233
StyD4I CCNGG 3 cut(s) 196, 233, 325
StyI CCWWGG 1 cut(s) 336
TaaI ACNGT 1 cut(s) 662
TaiI ACGT 1 cut(s) 18
TaqI TCGA 7 cut(s) 18, 30, 188, 215, 227, 313, 571
TasI AATT 6 cut(s) 32, 125, 165, 290, 309, 362
TatI WGTACW 1 cut(s) 269
TauI GCSGC 2 cut(s) 62, 154
TfiI GAWTC 1 cut(s) 354
TscAI CASTG 4 cut(s) 30, 78, 493, 523
TseFI GTSAC 1 cut(s) 649
Tsp45I GTSAC 1 cut(s) 649
TspDTI ATGAA 4 cut(s) 333, 433, 490, 689
TspGWI ACGGA 1 cut(s) 644
TspRI CASTG 4 cut(s) 30, 78, 493, 523
VpaK11BI GGWCC 1 cut(s) 535
XapI RAATTY 5 cut(s) 32, 125, 165, 290, 309
XhoI CTCGAG 1 cut(s) 214
XmnI GAANNNNTTC 1 cut(s) 567
XspI CTAG 1 cut(s) 267
ZraI GACGTC 1 cut(s) 16
ZrmI AGTACT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.