Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007454

Physical Location & Seq

Genomic Coordinates Reverse (-)

5761529 .. 5766639

Gene Structure 5111 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46739

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGAACAAGAGTAATATCAGAAGCTCTGATCTCATTGATGCCAAGCTTGAAGAACACCAGATGTGTGGATCGAAGCAGTGCCCCGGTTGTGGACACAAACTTGAAGGAAAGCCGGACTGGTTAGGTCTACCAGCAGGAGTGAAATTTGACCCAACAGACCAAGAACTGATTGAACACCTTGAAGCAAAGGTAGAAGCCAAAGACACAAAGTCTCACCCTTTGATTGATGAGTTCATTCCTACCATTGAAGGAGAAGATGGCATTTGTTACACCCATCCTGAAAAACTTCCTGGAGTGACTAGAGATGGGTTGAGCAGGCACTTCTTCCACAGACCCTCCAAGGCTTACACAACCGGGACAAGAAAGAGGCGAAAAATCCAAACAGAATGTGACCACTTGCAAGCCGGCGGGGAGACACGGTGGCACAAGACCGGCAAAACCAGGCCGGTGATGGTGAATGGCAAGCAAAAAGGGTGCAAGAAAATCCTGGTCCTCTACACAAACTTTGGGAAGAATCGAAAACCAGAGAAGACAAACTGGGTGATGCACCAGTACCATCTGGGCCAGCACGAGGAGGAGAAGGAAGGGGAGCTCGTAGTTTCGAAGATATTCTATCAGACGCAGCCGAGACAATGCAACTGGTCGTCCGAGAGAACAAGTGCTGCAAGTGCAAGTTTAACTGGTGAAGGAAGTAGTGATTTGAGAAGAGATAGTGGTGGTAGTGGGAGTTGTACTTCTTCTAAGGAAATAATAGTATCCCATAATACTCATCTTCGGGATCAGCATGATCAAATGTCCGCAGCAGCAGCAGCTCAAGTTAATGTCATTGCTCAGCCATTAACAAGTTACAATTCCATAGATATGCATCAGTTGAAGTCCGACCATTTCAGCTTTGTCCCATTCAGAAAAAGCTTCGATGAGGTGGGGATAGGAGAGGCTTCAACGGCAAGGGAACCCAGCATTGCATCTGGCACGTGCGAAGAGCTGCGTGAGAGACCACAGCTTCATCATGTGGCACATGATCAACTGCTACATCATCACCAACATCAACAACAAGTACACCATGAGCAACAGCAACATCAGCATGGCCAATCACATCATCAACAACAAATAGCAACGGCGGCCAGCTTTCACATCAGTCGGCCTTCACACCCCATTTCCACAATCATCTCTCCGCCTCCTCTTCATCACACCGGCACCTCCATCATTCTCGATCAGGATGCGTACCATGTCTCCCGATCAATAATGCTCCAAAACGAACATTTCCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAACAACAACATCATAAACAGATGGGAGGGAGGTCAGCATCTGGCTTGGAGGAGCTCATAATGGCCTGCACTTCATCGAGTAATGTCAAAGAAGAGTCATCATCCATGGCAAACCCTCAAGAGGCAGAGTGGATGAAGTACTCTTCATTCTGGCCTGACCCTGACAACCCAGATCATCATGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000075 GO:0000077 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0006950 GO:0006974 GO:0008150 GO:0009314 GO:0009628 GO:0009889 GO:0009987 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010564 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031570 GO:0033043 GO:0033554 GO:0040020 GO:0043565 GO:0045786 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051171 GO:0051252 GO:0051445 GO:0051716 GO:0051726 GO:0051783 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

494

Amino Acids

55.76

Weight (kDa)

6.65

Isoelectric Point (pI)

57.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	44 - 187	1.5e-25	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29230 AT4G29230 AT4G29230
fragaria_vesca	FvH4_1g06530 FvH4_1g06530
malus_domestica	MD02G1068700.v1.1 MD15G1200200.v1.1
prunus_persica	Prupe.7G217000_v2.0.a1 Prupe.7G217000_v2.0.a1 Prupe.7G217000_v2.0.a1
pyrus_communis	pycom02g05440 pycom15g17790
rosa_chinensis	RchiOBHm_Chr2g0092281
rosa_laevigata	RLG00000016293
rosa_multiflora	Rmu_sc0003289.1_g000022
rosa_roxburghii	Rroxscaffold_2G00149300
rosa_rugosa	Rorug02G0024400 Rorug02G0024500 Rorug02G0024600 Rorug02G0024600
rosa_samantha	Rh2AG070300 Rh2BG069800 Rh2CG071000 Rh2DG068800
rosa_wichuraiana	Rw2G006200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1196
AccI	GTMKAC	1 cut(s)	127
AciI	CCGC	4 cut(s)	408, 798, 1121, 1175
AclWI	GGATC	2 cut(s)	76, 786
AcoI	YGGCCR	2 cut(s)	1087, 1122
AcsI	RAATTY	1 cut(s)	143
AcvI	CACGTG	1 cut(s)	975
AfaI	GTAC	5 cut(s)	554, 733, 1059, 1226, 1439
AfiI	CCNNNNNNNGG	3 cut(s)	89, 571, 1420
AgsI	TTSAA	7 cut(s)	50, 104, 173, 182, 248, 874, 942
AhdI	GACNNNNNGTC	1 cut(s)	208
AjnI	CCWGG	3 cut(s)	289, 440, 486
Alw21I	GWGCWC	2 cut(s)	594, 1356
Alw26I	GTCTC	5 cut(s)	216, 407, 622, 988, 1237
AlwI	GGATC	2 cut(s)	76, 786
AlwNI	CAGNNNCTG	1 cut(s)	1340
AoxI	GGCC	7 cut(s)	443, 562, 1087, 1122, 1142, 1362, 1451
ApoI	RAATTY	1 cut(s)	143
Asp700I	GAANNNNTTC	2 cut(s)	285, 608
AspS9I	GGNCC	2 cut(s)	490, 562
AsuC2I	CCSGG	2 cut(s)	84, 355
AsuHPI	GGTGA	6 cut(s)	206, 460, 466, 553, 695, 1031
AsuII	TTCGAA	1 cut(s)	602
AvaII	GGWCC	1 cut(s)	490
BaeGI	GKGCMC	1 cut(s)	83
BalI	TGGCCA	1 cut(s)	1089
BanI	GGYRCC	1 cut(s)	1196
BanII	GRGCYC	2 cut(s)	594, 1356
BauI	CACGAG	1 cut(s)	569
BbrPI	CACGTG	1 cut(s)	975
BbsI	GAAGAC	1 cut(s)	536
Bbv12I	GWGCWC	2 cut(s)	594, 1356
BccI	CCATC	7 cut(s)	251, 282, 299, 445, 564, 1211, 1315
BceAI	ACGGC	2 cut(s)	960, 1134
BcgI	CGANNNNNNTGC	2 cut(s)	1202, 1236
BciT130I	CCWGG	3 cut(s)	291, 442, 488
BciVI	GTATCC	1 cut(s)	766
BclI	TGATCA	2 cut(s)	787, 1021
BcnI	CCSGG	2 cut(s)	84, 355
BcoDI	GTCTC	5 cut(s)	216, 407, 622, 988, 1237
BfaI	CTAG	1 cut(s)	300
BfuI	GTATCC	1 cut(s)	766
BlpI	GCTNAGC	1 cut(s)	831
BmcAI	AGTACT	1 cut(s)	1439
Bme1390I	CCNGG	5 cut(s)	84, 291, 355, 442, 488
Bme18I	GGWCC	1 cut(s)	490
BmeRI	GACNNNNNGTC	1 cut(s)	208
BmgT120I	GGNCC	2 cut(s)	490, 562
BmiI	GGNNCC	2 cut(s)	954, 1198
BmrFI	CCNGG	5 cut(s)	84, 291, 355, 442, 488
BmrI	ACTGGG	1 cut(s)	547
BmsI	GCATC	6 cut(s)	28, 534, 874, 974, 1210, 1346
BmuI	ACTGGG	1 cut(s)	547
BpiI	GAAGAC	1 cut(s)	536
BpmI	CTGGAG	1 cut(s)	312
Bpu1102I	GCTNAGC	1 cut(s)	831
Bpu14I	TTCGAA	1 cut(s)	602
BpuEI	CTTGAG	2 cut(s)	798, 1401
BpuMI	CCSGG	2 cut(s)	84, 355
BsaAI	YACGTR	1 cut(s)	975
BsaBI	GATNNNNATC	1 cut(s)	864
BsaI	GGTCTC	1 cut(s)	988
BsaJI	CCNNGG	3 cut(s)	82, 339, 1404
BsaXI	ACNNNNNCTCC	6 cut(s)	320, 350, 404, 434, 1217, 1247
Bsc4I	CCNNNNNNNGG	3 cut(s)	89, 571, 1420
Bse118I	RCCGGY	4 cut(s)	404, 431, 445, 1193
Bse1I	ACTGG	5 cut(s)	122, 542, 550, 644, 685
Bse3DI	GCAATG	2 cut(s)	825, 960
Bse8I	GATNNNNATC	1 cut(s)	864
BseBI	CCWGG	3 cut(s)	291, 442, 488
BseDI	CCNNGG	3 cut(s)	82, 339, 1404
BseGI	GGATG	4 cut(s)	274, 1225, 1400, 1437
BseJI	GATNNNNATC	1 cut(s)	864
BseLI	CCNNNNNNNGG	3 cut(s)	89, 571, 1420
BseMI	GCAATG	2 cut(s)	825, 960
BseMII	CTCAG	1 cut(s)	845
BseNI	ACTGG	5 cut(s)	122, 542, 550, 644, 685
BseRI	GAGGAG	4 cut(s)	587, 590, 1170, 1364
BseSI	GKGCMC	1 cut(s)	83
BseYI	CCCAGC	1 cut(s)	956
BsgI	GTGCAG	1 cut(s)	1351
BshFI	GGCC	7 cut(s)	445, 564, 1089, 1124, 1144, 1364, 1453
BshNI	GGYRCC	1 cut(s)	1196
BsiHKAI	GWGCWC	2 cut(s)	594, 1356
BsiSI	CCGG	7 cut(s)	84, 113, 354, 405, 432, 446, 1194
BslFI	GGGAC	2 cut(s)	370, 881
BslI	CCNNNNNNNGG	3 cut(s)	89, 571, 1420
BsmAI	GTCTC	5 cut(s)	216, 407, 622, 988, 1237
BsmFI	GGGAC	2 cut(s)	370, 881
BsnI	GGCC	7 cut(s)	445, 564, 1089, 1124, 1144, 1364, 1453
Bso31I	GGTCTC	1 cut(s)	988
Bsp119I	TTCGAA	1 cut(s)	602
Bsp1286I	GDGCHC	3 cut(s)	83, 594, 1356
Bsp143I	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
Bsp1720I	GCTNAGC	1 cut(s)	831
Bsp19I	CCATGG	1 cut(s)	1404
BspACI	CCGC	4 cut(s)	408, 798, 1121, 1175
BspANI	GGCC	7 cut(s)	445, 564, 1089, 1124, 1144, 1364, 1453
BspCNI	CTCAG	1 cut(s)	844
BspLI	GGNNCC	2 cut(s)	954, 1198
BspPI	GGATC	2 cut(s)	76, 786
BspQI	GCTCTTC	1 cut(s)	975
BspT104I	TTCGAA	1 cut(s)	602
BspT107I	GGYRCC	1 cut(s)	1196
BspTNI	GGTCTC	1 cut(s)	988
BsrDI	GCAATG	2 cut(s)	825, 960
BsrFI	RCCGGY	4 cut(s)	404, 431, 445, 1193
BsrI	ACTGG	5 cut(s)	122, 542, 550, 644, 685
BssAI	RCCGGY	4 cut(s)	404, 431, 445, 1193
BssECI	CCNNGG	3 cut(s)	82, 339, 1404
BssMI	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
BssSI	CACGAG	1 cut(s)	569
BssT1I	CCWWGG	2 cut(s)	339, 1404
Bst2BI	CACGAG	1 cut(s)	569
Bst2UI	CCWGG	3 cut(s)	291, 442, 488
Bst4CI	ACNGT	1 cut(s)	420
Bst6I	CTCTTC	5 cut(s)	700, 975, 1188, 1386, 1447
BstBAI	YACGTR	1 cut(s)	975
BstBI	TTCGAA	1 cut(s)	602
BstC8I	GCNNGC	7 cut(s)	317, 402, 406, 464, 566, 1126, 1366
BstDEI	CTNAG	2 cut(s)	741, 831
BstDSI	CCRYGG	1 cut(s)	1404
BstF5I	GGATG	4 cut(s)	274, 1225, 1400, 1437
BstKTI	GATC	8 cut(s)	31, 71, 781, 790, 1024, 1216, 1241, 1474
BstMAI	GTCTC	5 cut(s)	216, 407, 622, 988, 1237
BstMBI	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
BstMWI	GCNNNNNNNGC	8 cut(s)	668, 806, 809, 944, 1081, 1121, 1294, 1297
BstNI	CCWGG	3 cut(s)	291, 442, 488
BstSCI	CCNGG	5 cut(s)	82, 289, 353, 440, 486
BstSLI	GKGCMC	1 cut(s)	83
BstV2I	GAAGAC	1 cut(s)	536
BstXI	CCANNNNNNTGG	1 cut(s)	65
BsuI	GTATCC	1 cut(s)	766
BsuRI	GGCC	7 cut(s)	445, 564, 1089, 1124, 1144, 1364, 1453
BtgI	CCRYGG	1 cut(s)	1404
BtsCI	GGATG	4 cut(s)	274, 1225, 1400, 1437
BtsI	GCAGTG	1 cut(s)	83
BtsIMutI	CAGTG	1 cut(s)	83
Cac8I	GCNNGC	7 cut(s)	317, 402, 406, 464, 566, 1126, 1366
CaiI	CAGNNNCTG	1 cut(s)	1340
Cfr10I	RCCGGY	4 cut(s)	404, 431, 445, 1193
Cfr13I	GGNCC	2 cut(s)	490, 562
CseI	GACGC	1 cut(s)	628
Csp6I	GTAC	5 cut(s)	553, 732, 1058, 1225, 1438
CviAII	CATG	8 cut(s)	785, 1010, 1019, 1064, 1085, 1229, 1405, 1478
CviQI	GTAC	5 cut(s)	553, 732, 1058, 1225, 1438
DdeI	CTNAG	2 cut(s)	741, 831
DpnI	GATC	8 cut(s)	30, 70, 780, 789, 1023, 1215, 1240, 1473
DpnII	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
DriI	GACNNNNNGTC	1 cut(s)	208
EaeI	YGGCCR	2 cut(s)	1087, 1122
Eam1104I	CTCTTC	5 cut(s)	700, 975, 1188, 1386, 1447
Eam1105I	GACNNNNNGTC	1 cut(s)	208
EarI	CTCTTC	5 cut(s)	700, 975, 1188, 1386, 1447
EciI	GGCGGA	1 cut(s)	1164
Ecl136II	GAGCTC	2 cut(s)	592, 1354
Eco130I	CCWWGG	2 cut(s)	339, 1404
Eco24I	GRGCYC	2 cut(s)	594, 1356
Eco31I	GGTCTC	1 cut(s)	988
Eco47I	GGWCC	1 cut(s)	490
Eco53kI	GAGCTC	2 cut(s)	592, 1354
Eco72I	CACGTG	1 cut(s)	975
EcoICRI	GAGCTC	2 cut(s)	592, 1354
EcoRII	CCWGG	3 cut(s)	289, 440, 486
EcoT14I	CCWWGG	2 cut(s)	339, 1404
EcoT22I	ATGCAT	1 cut(s)	867
EcoT38I	GRGCYC	2 cut(s)	594, 1356
ErhI	CCWWGG	2 cut(s)	339, 1404
FaeI	CATG	8 cut(s)	788, 1013, 1022, 1067, 1088, 1232, 1408, 1481
FaqI	GGGAC	2 cut(s)	370, 881
FatI	CATG	8 cut(s)	784, 1009, 1018, 1063, 1084, 1228, 1404, 1477
FauI	CCCGC	1 cut(s)	401
FbaI	TGATCA	2 cut(s)	787, 1021
FblI	GTMKAC	1 cut(s)	127
FokI	GGATG	4 cut(s)	261, 1232, 1387, 1444
FriOI	GRGCYC	2 cut(s)	594, 1356
FspBI	CTAG	1 cut(s)	300
GsaI	CCCAGC	1 cut(s)	960
GsuI	CTGGAG	1 cut(s)	312
HaeIII	GGCC	7 cut(s)	445, 564, 1089, 1124, 1144, 1364, 1453
HapII	CCGG	7 cut(s)	84, 113, 354, 405, 432, 446, 1194
HgaI	GACGC	1 cut(s)	628
Hin1II	CATG	8 cut(s)	788, 1013, 1022, 1067, 1088, 1232, 1408, 1481
HindIII	AAGCTT	2 cut(s)	44, 910
HinfI	GANTC	2 cut(s)	514, 1394
HpaII	CCGG	7 cut(s)	84, 113, 354, 405, 432, 446, 1194
HphI	GGTGA	6 cut(s)	206, 460, 466, 553, 695, 1031
Hpy166II	GTNNAC	3 cut(s)	92, 128, 1060
Hpy188I	TCNGA	6 cut(s)	20, 28, 618, 649, 880, 905
Hpy188III	TCNNGA	6 cut(s)	278, 776, 1211, 1217, 1236, 1418
Hpy8I	GTNNAC	3 cut(s)	92, 128, 1060
HpyAV	CCTTC	6 cut(s)	98, 242, 574, 578, 680, 1155
HpyCH4III	ACNGT	1 cut(s)	420
HpyCH4IV	ACGT	1 cut(s)	974
HpyCH4V	TGCA	9 cut(s)	400, 477, 547, 636, 665, 671, 865, 965, 1368
HpyF10VI	GCNNNNNNNGC	8 cut(s)	668, 806, 809, 944, 1081, 1121, 1294, 1297
HpyF3I	CTNAG	2 cut(s)	741, 831
HpySE526I	ACGT	1 cut(s)	974
Hsp92II	CATG	8 cut(s)	788, 1013, 1022, 1067, 1088, 1232, 1408, 1481
KroI	GCCGGC	1 cut(s)	404
KroNI	GCCGGC	1 cut(s)	406
Ksp22I	TGATCA	2 cut(s)	787, 1021
Kzo9I	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
LguI	GCTCTTC	1 cut(s)	975
LmnI	GCTCC	3 cut(s)	589, 1254, 1351
LweI	GCATC	6 cut(s)	28, 534, 874, 974, 1210, 1346
MaeI	CTAG	1 cut(s)	300
MaeII	ACGT	1 cut(s)	974
MaeIII	GTNAC	4 cut(s)	266, 295, 389, 845
MalI	GATC	8 cut(s)	30, 70, 780, 789, 1023, 1215, 1240, 1473
MboI	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
MhlI	GDGCHC	3 cut(s)	83, 594, 1356
MlsI	TGGCCA	1 cut(s)	1089
MluCI	AATT	2 cut(s)	143, 850
MluNI	TGGCCA	1 cut(s)	1089
MlyI	GAGTC	1 cut(s)	1403
MmeI	TCCRAC	1 cut(s)	903
Mox20I	TGGCCA	1 cut(s)	1089
Mph1103I	ATGCAT	1 cut(s)	867
MroNI	GCCGGC	1 cut(s)	404
MroXI	GAANNNNTTC	2 cut(s)	285, 608
MscI	TGGCCA	1 cut(s)	1089
MseI	TTAA	3 cut(s)	677, 819, 839
MslI	CAYNNNNRTG	2 cut(s)	860, 1083
Msp20I	TGGCCA	1 cut(s)	1089
MspI	CCGG	7 cut(s)	84, 113, 354, 405, 432, 446, 1194
MspR9I	CCNGG	5 cut(s)	84, 291, 355, 442, 488
MvaI	CCWGG	3 cut(s)	291, 442, 488
MwoI	GCNNNNNNNGC	8 cut(s)	668, 806, 809, 944, 1081, 1121, 1294, 1297
NaeI	GCCGGC	1 cut(s)	406
NciI	CCSGG	2 cut(s)	84, 355
NcoI	CCATGG	1 cut(s)	1404
NdeII	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
NgoMIV	GCCGGC	1 cut(s)	404
NlaIII	CATG	8 cut(s)	788, 1013, 1022, 1067, 1088, 1232, 1408, 1481
NlaIV	GGNNCC	2 cut(s)	954, 1198
NmeAIII	GCCGAG	1 cut(s)	651
NmuCI	GTSAC	2 cut(s)	295, 389
NsiI	ATGCAT	1 cut(s)	867
NspV	TTCGAA	1 cut(s)	602
PciSI	GCTCTTC	1 cut(s)	975
PdiI	GCCGGC	1 cut(s)	406
PdmI	GAANNNNTTC	2 cut(s)	285, 608
PfeI	GAWTC	1 cut(s)	514
PfoI	TCCNGGA	1 cut(s)	289
PleI	GAGTC	1 cut(s)	1402
PmaCI	CACGTG	1 cut(s)	975
PmlI	CACGTG	1 cut(s)	975
PpsI	GAGTC	1 cut(s)	1402
Ppu21I	YACGTR	1 cut(s)	975
Psp124BI	GAGCTC	2 cut(s)	594, 1356
Psp6I	CCWGG	3 cut(s)	289, 440, 486
PspCI	CACGTG	1 cut(s)	975
PspFI	CCCAGC	1 cut(s)	956
PspGI	CCWGG	3 cut(s)	289, 440, 486
PspN4I	GGNNCC	2 cut(s)	954, 1198
PspPI	GGNCC	2 cut(s)	490, 562
PstNI	CAGNNNCTG	1 cut(s)	1340
RsaI	GTAC	5 cut(s)	554, 733, 1059, 1226, 1439
RsaNI	GTAC	5 cut(s)	553, 732, 1058, 1225, 1438
RseI	CAYNNNNRTG	2 cut(s)	860, 1083
SacI	GAGCTC	2 cut(s)	594, 1356
SapI	GCTCTTC	1 cut(s)	975
SaqAI	TTAA	3 cut(s)	677, 819, 839
Sau3AI	GATC	8 cut(s)	28, 68, 778, 787, 1021, 1213, 1238, 1471
Sau96I	GGNCC	2 cut(s)	490, 562
ScaI	AGTACT	1 cut(s)	1439
SchI	GAGTC	1 cut(s)	1403
ScrFI	CCNGG	5 cut(s)	84, 291, 355, 442, 488
SduI	GDGCHC	3 cut(s)	83, 594, 1356
SfaNI	GCATC	6 cut(s)	28, 534, 874, 974, 1210, 1346
SfuI	TTCGAA	1 cut(s)	602
SinI	GGWCC	1 cut(s)	490
SmiMI	CAYNNNNRTG	2 cut(s)	860, 1083
SmlI	CTYRAG	2 cut(s)	813, 1416
SmoI	CTYRAG	2 cut(s)	813, 1416
Sse9I	AATT	2 cut(s)	143, 850
SsiI	CCGC	4 cut(s)	408, 798, 1121, 1175
SspMI	CTAG	1 cut(s)	300
SstI	GAGCTC	2 cut(s)	594, 1356
StyD4I	CCNGG	5 cut(s)	82, 289, 353, 440, 486
StyI	CCWWGG	2 cut(s)	339, 1404
TaaI	ACNGT	1 cut(s)	420
TaiI	ACGT	1 cut(s)	977
TaqI	TCGA	6 cut(s)	71, 517, 602, 915, 1212, 1376
TasI	AATT	2 cut(s)	143, 850
TatI	WGTACW	3 cut(s)	731, 1057, 1437
TauI	GCSGC	1 cut(s)	1124
TfiI	GAWTC	1 cut(s)	514
Tru1I	TTAA	3 cut(s)	677, 819, 839
Tru9I	TTAA	3 cut(s)	677, 819, 839
TscAI	CASTG	1 cut(s)	83
TseFI	GTSAC	2 cut(s)	295, 389
Tsp45I	GTSAC	2 cut(s)	295, 389
TspDTI	ATGAA	7 cut(s)	17, 223, 995, 1175, 1362, 1434, 1448
TspRI	CASTG	1 cut(s)	83
VpaK11BI	GGWCC	1 cut(s)	490
XapI	RAATTY	1 cut(s)	143
XcmI	CCANNNNNNNNNTGG	1 cut(s)	448
XmiI	GTMKAC	1 cut(s)	127
XmnI	GAANNNNTTC	2 cut(s)	285, 608
XspI	CTAG	1 cut(s)	300
ZrmI	AGTACT	1 cut(s)	1439
Zsp2I	ATGCAT	1 cut(s)	867

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.