Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009224

Physical Location & Seq

Genomic Coordinates Forward (+)

6833754 .. 6836544

Gene Structure 2791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46862

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

ATGGACACTGCGTTCGAGCTTGATGAAGGCTCTCGCGCCAATTTTCTTAAACTCGTCAAGCAGTCTTTTAGCTGCTCTTACATTTGCTTATGGCGGTCTTATATTCCCAACTGTTTATTGTTTTTTGATGGTGTTTATGATGAAGAAAATCAACCCGGTAGCTCTTCTTCTTCTGGACCTAGTCTAGCTCGGAGGCTTTTCGACGAGTATCGGCTATCAATGTTCCCGATTGTCCAAAATGAATGTGTTCCAGGATTCGCTTTCAGAAATGGTCTTGCCTACGTAGAGTTGCAAGAAATGGATCTCCTAAGACTGGCATCAGTTCAAATTCAGAAGCAATTTTATCAGGAAGCAAGAATTAAGACTGCAGTTTTCATGGGGTGCAAGAGTGGAGAGATTGAGCTCGGCTTCTCCAATGTGTCTCAAATGAATGTAAAGAAGGAACTGATCATGAGAAGCTGGATGTTGCCAGAAGCTTTCTGTAGATCACAATTATCTCCACGTACGGTAGAAGTAGTTAGTTCTAGAGCAAATACTGAGCAGCAAAACCAACTTTCATCATCTTCCTCATCTTTGAGATCGCACTCAACCATGGATAGCCCCGAATATTCATCCCTCCTCTTCAACACTCTCCAAACGTCTACCGCACCTACTTCTCTCAATATCCCAGCTGATCAAGTCTATAATACTACAAACTTTACTTCATCATTGCAACCAATTGTATCACCAAATACAAACATATTTAGCAGTACTAGTAGTAGTACTAATCCTCATCAACAGGCCATGCAAGCATTTTCTCGAATTCGAGGGAACATCCAATTACCAGCTCCTGAGATCGAAGATGCTGAAATTACAAGAGCAATCCTTGCCGTCCTTACTACTCCTTCACCTTCTTCATCTCCTTCTATATCTTCACACCAATCAGTACCTCCAGCATTGAAGGATGATCCGGCCCCTAGTCCTAGTCATCTAAAGCCGAAACCCAGCAGTGCTTTCAAGAATTATAATTATATCTCATCGCCTTTGGCCCCAAGAACACAAACGAAAGGCGCTGCTAATTTAGCAGTACGTAAGCAAACTATGGTGAAGAGATCGATTTCCTTCTTGAGAAGCTTAAATTTACTGAGAATTCGCGATCAGGGTATGCAAGCTGCCACCCGCCCCACAACAAGTCAGTTGCATCATATGATATCTGAGCGCAAAAGGCGTGAGAAACTCAACGAAAGCTTTCATTCTTTGAAATCTCTACTTCCTCCTGGAACCAAGAAAGACAAAGCATCAGTGCTTACAACTGCAAGGGACTACTTAACTAGTTTAAAAGCTCAAGTTGATGAGCTTAGCAAACGAAACCAGCAGTTAGAGGCAGCTGCAAGGCTCATAGCAAAAGAAGATCAAGAAGAAGAAGCAGCTGGCTCCTCATCAACAGAAAGAGTTACTGTGATGCTTACGCATGTATCTGGCTGGAGCACAGATCCAGATCAGCAAATTATTGCCTTGCAAGTGATTGTGAGATCAGGAGAATGTTCGACCGAAGATATGGTAATTAGAATCTTGGAATTCTTGAAGCAAGTTAAGAACTTGAGCGTGGTGTCCATGGAAGCAAGTACTTGGAAAACAGAATTACATCCCAACATCAACCGCGTGGTCTTGAGATTAAGAGTTGATGATCAGGCGAACGAATGGGACGAGTCTGCCTTCCAGGAAGCAGTGAGAAGGGTGGTTGCTGACTTGGCACAAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

580

Amino Acids

64.78

Weight (kDa)

8.54

Isoelectric Point (pI)

61.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7050	PF23133	1 - 160	6.9e-59	Domain of unknown function (DUF7050)
HLH	PF00010	394 - 439	1.9e-11	Helix-loop-helix DNA-binding domain
DUF7049	PF23132	476 - 577	4.4e-31	Domain of unknown function (DUF7049)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56960 AT5G56960
fragaria_vesca	FvH4_1g07710 FvH4_1g07710 FvH4_1g07710
malus_domestica	MD02G1081600.v1.1 MD15G1208900.v1.1
prunus_persica	Prupe.7G207500_v2.0.a1
pyrus_communis	pycom02g06440 pycom15g18520
rosa_chinensis	RchiOBHm_Chr2g0093571
rosa_laevigata	RLG00000016419
rosa_multiflora	Rmu_sc0006964.1_g000006 Rmu_sc0024845.1_g000001 Rmu_sc0024846.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147970
rosa_rugosa	Rorug02G0037700
rosa_samantha	Rh2AG084200 Rh2BG084800 Rh2CG087100 Rh2DG082800
rosa_wichuraiana	Rw2G007120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1005
AccI	GTMKAC	1 cut(s)	641
AccII	CGCG	3 cut(s)	36, 1134, 1641
AciI	CCGC	4 cut(s)	94, 645, 1159, 1639
AclWI	GGATC	3 cut(s)	309, 941, 1466
AcsI	RAATTY	5 cut(s)	327, 801, 1117, 1128, 1556
AfaI	GTAC	6 cut(s)	505, 751, 763, 927, 1068, 1606
AfiI	CCNNNNNNNGG	1 cut(s)	313
AgsI	TTSAA	6 cut(s)	326, 625, 940, 997, 1240, 1564
AhlI	ACTAGT	2 cut(s)	752, 1310
AjnI	CCWGG	3 cut(s)	250, 1255, 1698
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	2 cut(s)	405, 1469
Alw26I	GTCTC	1 cut(s)	426
AlwI	GGATC	3 cut(s)	309, 941, 1466
AlwNI	CAGNNNCTG	1 cut(s)	830
AoxI	GGCC	3 cut(s)	780, 951, 1026
ApeKI	GCWGC	7 cut(s)	72, 541, 1052, 1151, 1364, 1367, 1406
ApoI	RAATTY	5 cut(s)	327, 801, 1117, 1128, 1556
ArsI	GACNNNNNNTTYG	1 cut(s)	28
Asp700I	GAANNNNTTC	2 cut(s)	246, 1227
AspLEI	GCGC	3 cut(s)	38, 1052, 1200
AspS9I	GGNCC	3 cut(s)	176, 952, 1027
AsuC2I	CCSGG	1 cut(s)	156
AsuHPI	GGTGA	3 cut(s)	717, 879, 1096
AvaII	GGWCC	1 cut(s)	176
BaeI	ACNNNNGTAYC	2 cut(s)	1437, 1470
BanII	GRGCYC	1 cut(s)	405
BarI	GAAGNNNNNNTAC	2 cut(s)	151, 183
Bbv12I	GWGCWC	2 cut(s)	405, 1469
BbvI	GCAGC	7 cut(s)	59, 553, 1039, 1138, 1354, 1376, 1418
BccI	CCATC	1 cut(s)	122
BceAI	ACGGC	1 cut(s)	854
BciT130I	CCWGG	3 cut(s)	252, 1257, 1700
BclI	TGATCA	3 cut(s)	447, 673, 1666
BcnI	CCSGG	1 cut(s)	156
BcoDI	GTCTC	1 cut(s)	426
BcuI	ACTAGT	2 cut(s)	752, 1310
BfaI	CTAG	7 cut(s)	180, 185, 525, 753, 957, 963, 1311
BfmI	CTRYAG	2 cut(s)	366, 481
BfoI	RGCGCY	1 cut(s)	1053
BisI	GCNGC	7 cut(s)	73, 542, 1053, 1152, 1365, 1368, 1407
BlpI	GCTNAGC	1 cut(s)	1337
BlsI	GCNGC	7 cut(s)	74, 543, 1054, 1153, 1366, 1369, 1408
BmcAI	AGTACT	3 cut(s)	751, 763, 1606
Bme1390I	CCNGG	4 cut(s)	156, 252, 1257, 1700
Bme18I	GGWCC	1 cut(s)	176
BmgT120I	GGNCC	3 cut(s)	176, 952, 1027
BmiI	GGNNCC	4 cut(s)	954, 1029, 1261, 1414
BmrFI	CCNGG	4 cut(s)	156, 252, 1257, 1700
BmsI	GCATC	5 cut(s)	326, 832, 1189, 1286, 1431
BpmI	CTGGAG	2 cut(s)	915, 1483
Bpu1102I	GCTNAGC	1 cut(s)	1337
BpuEI	CTTGAG	4 cut(s)	1126, 1308, 1600, 1669
BpuMI	CCSGG	1 cut(s)	156
Bsa29I	ATCGAT	1 cut(s)	1094
BsaAI	YACGTR	3 cut(s)	283, 503, 1070
BsaBI	GATNNNNATC	1 cut(s)	1476
BsaJI	CCNNGG	2 cut(s)	591, 1593
Bsc4I	CCNNNNNNNGG	1 cut(s)	313
Bse1I	ACTGG	1 cut(s)	318
Bse3DI	GCAATG	1 cut(s)	707
Bse8I	GATNNNNATC	1 cut(s)	1476
BseBI	CCWGG	3 cut(s)	252, 1257, 1700
BseCI	ATCGAT	1 cut(s)	1094
BseDI	CCNNGG	2 cut(s)	591, 1593
BseGI	GGATG	5 cut(s)	468, 611, 813, 949, 1624
BseJI	GATNNNNATC	1 cut(s)	1476
BseLI	CCNNNNNNNGG	1 cut(s)	313
BseMI	GCAATG	1 cut(s)	707
BseMII	CTCAG	4 cut(s)	528, 822, 1115, 1185
BseNI	ACTGG	1 cut(s)	318
BseRI	GAGGAG	2 cut(s)	608, 1405
BseXI	GCAGC	7 cut(s)	59, 553, 1039, 1138, 1354, 1376, 1418
BseYI	CCCAGC	2 cut(s)	667, 983
Bsh1236I	CGCG	3 cut(s)	36, 1134, 1641
Bsh1285I	CGRYCG	1 cut(s)	1530
BshFI	GGCC	3 cut(s)	782, 953, 1028
BshVI	ATCGAT	1 cut(s)	1094
BsiEI	CGRYCG	1 cut(s)	1530
BsiHKAI	GWGCWC	2 cut(s)	405, 1469
BsiSI	CCGG	2 cut(s)	156, 950
BsiWI	CGTACG	1 cut(s)	503
BslFI	GGGAC	2 cut(s)	1313, 1697
BslI	CCNNNNNNNGG	1 cut(s)	313
BsmAI	GTCTC	1 cut(s)	426
BsmFI	GGGAC	2 cut(s)	1313, 1697
BsnI	GGCC	3 cut(s)	782, 953, 1028
Bsp1286I	GDGCHC	2 cut(s)	405, 1469
Bsp1720I	GCTNAGC	1 cut(s)	1337
Bsp19I	CCATGG	2 cut(s)	591, 1593
Bsp68I	TCGCGA	1 cut(s)	1134
BspACI	CCGC	4 cut(s)	94, 645, 1159, 1639
BspANI	GGCC	3 cut(s)	782, 953, 1028
BspCNI	CTCAG	4 cut(s)	529, 823, 1116, 1186
BspDI	ATCGAT	1 cut(s)	1094
BspFNI	CGCG	3 cut(s)	36, 1134, 1641
BspHI	TCATGA	1 cut(s)	450
BspLI	GGNNCC	4 cut(s)	954, 1029, 1261, 1414
BspMAI	CTGCAG	1 cut(s)	370
BspPI	GGATC	3 cut(s)	309, 941, 1466
BspQI	GCTCTTC	1 cut(s)	169
BsrDI	GCAATG	1 cut(s)	707
BsrI	ACTGG	1 cut(s)	318
BssECI	CCNNGG	2 cut(s)	591, 1593
BssT1I	CCWWGG	2 cut(s)	591, 1593
Bst2UI	CCWGG	3 cut(s)	252, 1257, 1700
Bst4CI	ACNGT	3 cut(s)	113, 508, 1438
Bst6I	CTCTTC	3 cut(s)	169, 626, 1082
BstAPI	GCANNNNNTGC	1 cut(s)	866
BstBAI	YACGTR	3 cut(s)	283, 503, 1070
BstC8I	GCNNGC	3 cut(s)	789, 1149, 1411
BstDEI	CTNAG	6 cut(s)	308, 537, 831, 1124, 1194, 1337
BstDSI	CCRYGG	2 cut(s)	591, 1593
BstF5I	GGATG	5 cut(s)	468, 611, 813, 949, 1624
BstFNI	CGCG	3 cut(s)	36, 1134, 1641
BstH2I	RGCGCY	1 cut(s)	1053
BstHHI	GCGC	3 cut(s)	38, 1052, 1200
BstMAI	GTCTC	1 cut(s)	426
BstMCI	CGRYCG	1 cut(s)	1530
BstMWI	GCNNNNNNNGC	5 cut(s)	788, 866, 1061, 1204, 1730
BstNI	CCWGG	3 cut(s)	252, 1257, 1700
BstNSI	RCATGY	1 cut(s)	1454
BstSCI	CCNGG	4 cut(s)	154, 250, 1255, 1698
BstSFI	CTRYAG	2 cut(s)	366, 481
BstSNI	TACGTA	2 cut(s)	283, 1070
BstUI	CGCG	3 cut(s)	36, 1134, 1641
BstV1I	GCAGC	7 cut(s)	59, 553, 1039, 1138, 1354, 1376, 1418
BstX2I	RGATCY	2 cut(s)	301, 1471
BstYI	RGATCY	2 cut(s)	301, 1471
Bsu15I	ATCGAT	1 cut(s)	1094
BsuRI	GGCC	3 cut(s)	782, 953, 1028
BsuTUI	ATCGAT	1 cut(s)	1094
BtgI	CCRYGG	2 cut(s)	591, 1593
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	5 cut(s)	468, 611, 813, 949, 1624
BtsI	GCAGTG	3 cut(s)	6, 994, 1713
BtsIMutI	CAGTG	4 cut(s)	6, 994, 1287, 1713
BtuMI	TCGCGA	1 cut(s)	1134
Cac8I	GCNNGC	3 cut(s)	789, 1149, 1411
CaiI	CAGNNNCTG	1 cut(s)	830
CciI	TCATGA	1 cut(s)	450
CfoI	GCGC	3 cut(s)	38, 1052, 1200
Cfr13I	GGNCC	3 cut(s)	176, 952, 1027
ClaI	ATCGAT	1 cut(s)	1094
Csp6I	GTAC	6 cut(s)	504, 750, 762, 926, 1067, 1605
CviAII	CATG	6 cut(s)	376, 451, 592, 784, 1451, 1594
CviQI	GTAC	6 cut(s)	504, 750, 762, 926, 1067, 1605
DdeI	CTNAG	6 cut(s)	308, 537, 831, 1124, 1194, 1337
DraI	TTTAAA	1 cut(s)	1317
Eam1104I	CTCTTC	3 cut(s)	169, 626, 1082
EarI	CTCTTC	3 cut(s)	169, 626, 1082
Ecl136II	GAGCTC	1 cut(s)	403
Eco105I	TACGTA	2 cut(s)	283, 1070
Eco130I	CCWWGG	2 cut(s)	591, 1593
Eco24I	GRGCYC	1 cut(s)	405
Eco32I	GATATC	1 cut(s)	1191
Eco47I	GGWCC	1 cut(s)	176
Eco53kI	GAGCTC	1 cut(s)	403
EcoICRI	GAGCTC	1 cut(s)	403
EcoRI	GAATTC	3 cut(s)	801, 1128, 1556
EcoRII	CCWGG	3 cut(s)	250, 1255, 1698
EcoRV	GATATC	1 cut(s)	1191
EcoT14I	CCWWGG	2 cut(s)	591, 1593
EcoT38I	GRGCYC	1 cut(s)	405
ErhI	CCWWGG	2 cut(s)	591, 1593
FaeI	CATG	6 cut(s)	379, 454, 595, 787, 1454, 1597
FaqI	GGGAC	2 cut(s)	1313, 1697
FatI	CATG	6 cut(s)	375, 450, 591, 783, 1450, 1593
FauI	CCCGC	1 cut(s)	1166
FauNDI	CATATG	1 cut(s)	1185
FbaI	TGATCA	3 cut(s)	447, 673, 1666
FblI	GTMKAC	1 cut(s)	641
Fnu4HI	GCNGC	7 cut(s)	73, 542, 1053, 1152, 1365, 1368, 1407
FokI	GGATG	5 cut(s)	475, 598, 800, 956, 1611
FriOI	GRGCYC	1 cut(s)	405
Fsp4HI	GCNGC	7 cut(s)	73, 542, 1053, 1152, 1365, 1368, 1407
FspBI	CTAG	7 cut(s)	180, 185, 525, 753, 957, 963, 1311
GlaI	GCGC	3 cut(s)	37, 1051, 1199
GluI	GCNGC	7 cut(s)	73, 542, 1053, 1152, 1365, 1368, 1407
GsaI	CCCAGC	2 cut(s)	671, 987
GsuI	CTGGAG	2 cut(s)	915, 1483
HaeII	RGCGCY	1 cut(s)	1053
HaeIII	GGCC	3 cut(s)	782, 953, 1028
HapII	CCGG	2 cut(s)	156, 950
HhaI	GCGC	3 cut(s)	38, 1052, 1200
Hin1II	CATG	6 cut(s)	379, 454, 595, 787, 1454, 1597
Hin6I	GCGC	3 cut(s)	36, 1050, 1198
HinP1I	GCGC	3 cut(s)	36, 1050, 1198
HindIII	AAGCTT	3 cut(s)	474, 1111, 1225
HinfI	GANTC	3 cut(s)	255, 1548, 1688
HpaII	CCGG	2 cut(s)	156, 950
HphI	GGTGA	3 cut(s)	717, 879, 1096
Hpy166II	GTNNAC	1 cut(s)	642
Hpy188I	TCNGA	4 cut(s)	192, 266, 333, 1195
Hpy8I	GTNNAC	1 cut(s)	642
Hpy99I	CGWCG	1 cut(s)	206
HpyAV	CCTTC	9 cut(s)	20, 433, 894, 900, 912, 934, 1111, 1705, 1707
HpyCH4III	ACNGT	3 cut(s)	113, 508, 1438
HpyCH4IV	ACGT	4 cut(s)	282, 502, 638, 1069
HpyF10VI	GCNNNNNNNGC	5 cut(s)	788, 866, 1061, 1204, 1730
HpyF3I	CTNAG	6 cut(s)	308, 537, 831, 1124, 1194, 1337
HpySE526I	ACGT	4 cut(s)	282, 502, 638, 1069
Hsp92II	CATG	6 cut(s)	379, 454, 595, 787, 1454, 1597
HspAI	GCGC	3 cut(s)	36, 1050, 1198
Ksp22I	TGATCA	3 cut(s)	447, 673, 1666
LguI	GCTCTTC	1 cut(s)	169
LmnI	GCTCC	3 cut(s)	832, 1418, 1464
Lsp1109I	GCAGC	7 cut(s)	59, 553, 1039, 1138, 1354, 1376, 1418
LweI	GCATC	5 cut(s)	326, 832, 1189, 1286, 1431
MaeI	CTAG	7 cut(s)	180, 185, 525, 753, 957, 963, 1311
MaeII	ACGT	4 cut(s)	282, 502, 638, 1069
MaeIII	GTNAC	1 cut(s)	1432
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	2 cut(s)	301, 1471
MhlI	GDGCHC	2 cut(s)	405, 1469
MlyI	GAGTC	1 cut(s)	1697
MroXI	GAANNNNTTC	2 cut(s)	246, 1227
MseI	TTAA	7 cut(s)	48, 360, 1115, 1307, 1316, 1572, 1655
MspA1I	CMGCKG	3 cut(s)	671, 1367, 1409
MspI	CCGG	2 cut(s)	156, 950
MspR9I	CCNGG	4 cut(s)	156, 252, 1257, 1700
MunI	CAATTG	1 cut(s)	717
MvaI	CCWGG	3 cut(s)	252, 1257, 1700
MvnI	CGCG	3 cut(s)	36, 1134, 1641
MwoI	GCNNNNNNNGC	5 cut(s)	788, 866, 1061, 1204, 1730
NciI	CCSGG	1 cut(s)	156
NcoI	CCATGG	2 cut(s)	591, 1593
NdeI	CATATG	1 cut(s)	1185
NlaIII	CATG	6 cut(s)	379, 454, 595, 787, 1454, 1597
NlaIV	GGNNCC	4 cut(s)	954, 1029, 1261, 1414
NmeAIII	GCCGAG	1 cut(s)	384
NruI	TCGCGA	1 cut(s)	1134
NspI	RCATGY	1 cut(s)	1454
PagI	TCATGA	1 cut(s)	450
PciSI	GCTCTTC	1 cut(s)	169
PcsI	WCGNNNNNNNCGW	1 cut(s)	1683
PdmI	GAANNNNTTC	2 cut(s)	246, 1227
PfeI	GAWTC	2 cut(s)	255, 1548
Pfl23II	CGTACG	1 cut(s)	503
PflFI	GACNNNGTC	1 cut(s)	180
PfoI	TCCNGGA	3 cut(s)	250, 1255, 1698
PkrI	GCNGC	7 cut(s)	74, 543, 1054, 1153, 1366, 1369, 1408
PleI	GAGTC	1 cut(s)	1696
PpsI	GAGTC	1 cut(s)	1696
Ppu21I	YACGTR	3 cut(s)	283, 503, 1070
PsiI	TTATAA	1 cut(s)	1005
Psp124BI	GAGCTC	1 cut(s)	405
Psp6I	CCWGG	3 cut(s)	250, 1255, 1698
PspFI	CCCAGC	2 cut(s)	667, 983
PspGI	CCWGG	3 cut(s)	250, 1255, 1698
PspLI	CGTACG	1 cut(s)	503
PspN4I	GGNNCC	4 cut(s)	954, 1029, 1261, 1414
PspPI	GGNCC	3 cut(s)	176, 952, 1027
PstI	CTGCAG	1 cut(s)	370
PstNI	CAGNNNCTG	1 cut(s)	830
PsuI	RGATCY	2 cut(s)	301, 1471
PsyI	GACNNNGTC	1 cut(s)	180
PvuII	CAGCTG	3 cut(s)	671, 1367, 1409
RruI	TCGCGA	1 cut(s)	1134
RsaI	GTAC	6 cut(s)	505, 751, 763, 927, 1068, 1606
RsaNI	GTAC	6 cut(s)	504, 750, 762, 926, 1067, 1605
SacI	GAGCTC	1 cut(s)	405
SapI	GCTCTTC	1 cut(s)	169
SaqAI	TTAA	7 cut(s)	48, 360, 1115, 1307, 1316, 1572, 1655
SatI	GCNGC	7 cut(s)	73, 542, 1053, 1152, 1365, 1368, 1407
Sau96I	GGNCC	3 cut(s)	176, 952, 1027
ScaI	AGTACT	3 cut(s)	751, 763, 1606
SchI	GAGTC	1 cut(s)	1697
ScrFI	CCNGG	4 cut(s)	156, 252, 1257, 1700
SduI	GDGCHC	2 cut(s)	405, 1469
SfaNI	GCATC	5 cut(s)	326, 832, 1189, 1286, 1431
SfcI	CTRYAG	2 cut(s)	366, 481
SinI	GGWCC	1 cut(s)	176
SmlI	CTYRAG	4 cut(s)	1105, 1323, 1579, 1648
SmoI	CTYRAG	4 cut(s)	1105, 1323, 1579, 1648
SnaBI	TACGTA	2 cut(s)	283, 1070
SpeI	ACTAGT	2 cut(s)	752, 1310
SsiI	CCGC	4 cut(s)	94, 645, 1159, 1639
SspI	AATATT	1 cut(s)	608
SspMI	CTAG	7 cut(s)	180, 185, 525, 753, 957, 963, 1311
SstI	GAGCTC	1 cut(s)	405
StyD4I	CCNGG	4 cut(s)	154, 250, 1255, 1698
StyI	CCWWGG	2 cut(s)	591, 1593
TaaI	ACNGT	3 cut(s)	113, 508, 1438
TaiI	ACGT	4 cut(s)	285, 505, 641, 1072
TaqI	TCGA	7 cut(s)	15, 201, 799, 805, 837, 1094, 1526
TaqII	GACCGA	1 cut(s)	1544
TatI	WGTACW	3 cut(s)	749, 761, 1604
TfiI	GAWTC	2 cut(s)	255, 1548
Tru1I	TTAA	7 cut(s)	48, 360, 1115, 1307, 1316, 1572, 1655
Tru9I	TTAA	7 cut(s)	48, 360, 1115, 1307, 1316, 1572, 1655
TscAI	CASTG	4 cut(s)	13, 994, 1287, 1713
TseI	GCWGC	7 cut(s)	72, 541, 1052, 1151, 1364, 1367, 1406
TspRI	CASTG	4 cut(s)	13, 994, 1287, 1713
Tth111I	GACNNNGTC	1 cut(s)	180
VpaK11BI	GGWCC	1 cut(s)	176
XapI	RAATTY	5 cut(s)	327, 801, 1117, 1128, 1556
XbaI	TCTAGA	1 cut(s)	524
XceI	RCATGY	1 cut(s)	1454
XmiI	GTMKAC	1 cut(s)	641
XmnI	GAANNNNTTC	2 cut(s)	246, 1227
XspI	CTAG	7 cut(s)	180, 185, 525, 753, 957, 963, 1311
ZrmI	AGTACT	3 cut(s)	751, 763, 1606

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.