Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0009224

Physical Location & Seq

Genomic Coordinates Reverse (-)

85638718 .. 85642072

Gene Structure 3355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00147970.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGACACTGCGTTCGAGCTCGACGAAGGCTCTCGCGCCAATTTTCTTAAAGTCGTCAAGCAGTCTTTTAGCTGCTCTTACATTTGCTTATGGCGGTCTTATATTCCCAACTGTTTATTGTTTTTTGATGGTGTTTATGATGAAGAAAATCAACCCGCTAGCTCTTCTTCTTCTGGACCTAGTCTAGCTCGGAGGCTTTTCGACGAGTATCGGCTGTCAATGTTCCCGATTGTCCAAAATGAATGTGTTCCAGGATTCGCCTTCAGGAATGGTCTTGCCTACGTAGAGTTGCAAGAAATGGATCTCCTAAGACTGGCATCAGTTCAAATTCAGAAGCAATTTTATCAGGAAGCAAGAATTAAGACTGCAGTTTTCATGGGGTGCAAGAGTGGAGAGATTGAGCTCGGCTTCTCCAATGTGTCTCAAATGAACGTAAAGAAGGAACTGATCATGAGAAGCTGGATGTTGCCAGAAGCTTTCTGTAGATCACAATTATCTCCACGTACAGTTGAAGTAGTTAGTACTAGAGCAAATACTGAGCAGCAAAACCAACTATCATCATCTTCCTCATCTTTGAGATCGCACTCGACCATGGATAGCCCCGAATATTCATCCCTCCTCTTCAACACTATCCAAACATCTACCGCACCTACTTCTCTCAATATCCCAGCTGATCAAGTCTATAATACTACAAACTTTACTTCATCATTGCAACCAATTGTATCACCAAATACAAACATATTTAGCAGTACTAGTAGTAGTACTAATCCTCATCAACAGGCCATGCAAGCATTTTCTCGAATTCGAGGGAACATCCAATTACCAGCTCCTGAGATCGAAGATGCTGAAATTACAAGAGCAATCCTTGCCGTCCTGACTTGTCCTTCACCTTCTTCATCTCCTTCTATATCTTCACACCAATCAGTACCTCCAGCATTGAAGGATGATCCGGCCCCTAGTCCTAGTCATCTAAAGCCGAAACCCAGCAGTGCTTTCAAGAATTATATCTCATCGCCTTTGGCCCCAAGAACACAAACGAAAGGCGCTGCTAATTTAGCAGTACGTAAGCAAACTATGGTGAAGAGATCGATTTCCTTCTTGAGAAGCTTAAATTTACTGAGAATTCGCGATCAGGGTATGCAAGCTGCCACCCGCCCCACAACAAGTCAGTTGCATCATATGATATCTGAGCGCAAAAGGCGTGAGAAACTCAACGAAAGCTTTCATTCTTTGAAATCTCTACTTCCTCCTGGAACCAAGAAAGACAAAGCATCAGTGCTTACAACTGCAAGGGACTACTTAACTAGTTTAAAAGCTCAAGTTGATGAGCTTAGCAAACGAAACCAGCAGTTAGAGGCAGCTGCAAGGCTTATAGCAAAAGAAGAAGAAGAAGAAGCAGCTGGCTCCTCATCATCAACAGAAAGAGTTACTGTGACTCTTACGCATGTATCTGGCTCGAGCACAGATCAAGATCAGCAAATTATTGCCTTGCAAGTGATTGTGAGATCAGGAGAATGTTCGACCGAAGATATGGTAATTAGAATCTTGGAATTCTTGAAGCAAGTTAAGAACTTGAGCTTGATGTCCATGGAAGCAAGTACTTGGAAAACAGAATTACATCCCAACATCAACCGCGTGGTCTTGAGATTAAGAGTTGATGATCAGGCGAACGAATGGGACGAGTCTGCCTTCCAGGAAGCAGTGAGAAGGGTGGTTGCTGACTTGGCACAAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0042221 GO:0042493 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1901698 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

578

Amino Acids

64.44

Weight (kDa)

8.5

Isoelectric Point (pI)

62.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7050	PF23133	1 - 160	4.4e-59	Domain of unknown function (DUF7050)
HLH	PF00010	392 - 437	1.9e-11	Helix-loop-helix DNA-binding domain
DUF7049	PF23132	474 - 575	3.6e-32	Domain of unknown function (DUF7049)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009224)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56960 AT5G56960
fragaria_vesca	FvH4_1g07710 FvH4_1g07710 FvH4_1g07710
malus_domestica	MD02G1081600.v1.1 MD15G1208900.v1.1
prunus_persica	Prupe.7G207500_v2.0.a1
pyrus_communis	pycom02g06440 pycom15g18520
rosa_chinensis	RchiOBHm_Chr2g0093571
rosa_laevigata	RLG00000016419
rosa_multiflora	Rmu_sc0006964.1_g000006 Rmu_sc0024845.1_g000001 Rmu_sc0024846.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147970
rosa_rugosa	Rorug02G0037700
rosa_samantha	Rh2AG084200 Rh2BG084800 Rh2CG087100 Rh2DG082800
rosa_wichuraiana	Rw2G007120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	36, 1128, 1635
AciI	CCGC	5 cut(s)	94, 156, 645, 1153, 1633
AclWI	GGATC	2 cut(s)	309, 941
AcsI	RAATTY	5 cut(s)	327, 801, 1111, 1122, 1550
AcuI	CTGAAG	1 cut(s)	247
AfaI	GTAC	7 cut(s)	505, 523, 751, 763, 927, 1062, 1600
AfiI	CCNNNNNNNGG	1 cut(s)	313
AgsI	TTSAA	7 cut(s)	326, 512, 625, 940, 997, 1234, 1558
AhlI	ACTAGT	2 cut(s)	752, 1304
AjnI	CCWGG	3 cut(s)	250, 1249, 1692
AloI	GAACNNNNNNTCC	1 cut(s)	28
Alw21I	GWGCWC	3 cut(s)	21, 405, 1463
Alw26I	GTCTC	1 cut(s)	426
AlwI	GGATC	2 cut(s)	309, 941
AlwNI	CAGNNNCTG	1 cut(s)	830
Ama87I	CYCGRG	1 cut(s)	1456
AoxI	GGCC	3 cut(s)	780, 951, 1020
ApeKI	GCWGC	7 cut(s)	72, 541, 1046, 1145, 1358, 1361, 1397
ApoI	RAATTY	5 cut(s)	327, 801, 1111, 1122, 1550
ArsI	GACNNNNNNTTYG	1 cut(s)	28
Asp700I	GAANNNNTTC	2 cut(s)	246, 1221
AspLEI	GCGC	3 cut(s)	38, 1046, 1194
AspS9I	GGNCC	3 cut(s)	176, 952, 1021
AsuHPI	GGTGA	3 cut(s)	717, 879, 1090
AsuNHI	GCTAGC	1 cut(s)	158
AvaI	CYCGRG	1 cut(s)	1456
AvaII	GGWCC	1 cut(s)	176
BaeI	ACNNNNGTAYC	2 cut(s)	1431, 1464
BanII	GRGCYC	2 cut(s)	21, 405
Bbv12I	GWGCWC	3 cut(s)	21, 405, 1463
BbvI	GCAGC	7 cut(s)	59, 553, 1033, 1132, 1348, 1370, 1409
BccI	CCATC	1 cut(s)	122
BceAI	ACGGC	1 cut(s)	854
BciT130I	CCWGG	3 cut(s)	252, 1251, 1694
BclI	TGATCA	3 cut(s)	447, 673, 1660
BcoDI	GTCTC	1 cut(s)	426
BcuI	ACTAGT	2 cut(s)	752, 1304
BfaI	CTAG	8 cut(s)	159, 180, 185, 525, 753, 957, 963, 1305
BfmI	CTRYAG	2 cut(s)	366, 481
BfoI	RGCGCY	1 cut(s)	1047
BisI	GCNGC	7 cut(s)	73, 542, 1047, 1146, 1359, 1362, 1398
BlpI	GCTNAGC	1 cut(s)	1331
BlsI	GCNGC	7 cut(s)	74, 543, 1048, 1147, 1360, 1363, 1399
BmcAI	AGTACT	4 cut(s)	523, 751, 763, 1600
Bme1390I	CCNGG	3 cut(s)	252, 1251, 1694
Bme18I	GGWCC	1 cut(s)	176
BmeT110I	CYCGRG	1 cut(s)	1456
BmgT120I	GGNCC	3 cut(s)	176, 952, 1021
BmiI	GGNNCC	4 cut(s)	954, 1023, 1255, 1405
BmrFI	CCNGG	3 cut(s)	252, 1251, 1694
BmsI	GCATC	4 cut(s)	326, 832, 1183, 1280
BmtI	GCTAGC	1 cut(s)	162
BpmI	CTGGAG	1 cut(s)	915
Bpu1102I	GCTNAGC	1 cut(s)	1331
BpuEI	CTTGAG	4 cut(s)	1120, 1302, 1594, 1663
Bsa29I	ATCGAT	1 cut(s)	1088
BsaAI	YACGTR	3 cut(s)	283, 503, 1064
BsaBI	GATNNNNATC	1 cut(s)	1470
BsaJI	CCNNGG	2 cut(s)	591, 1587
Bsc4I	CCNNNNNNNGG	1 cut(s)	313
Bse1I	ACTGG	1 cut(s)	318
Bse3DI	GCAATG	1 cut(s)	707
Bse8I	GATNNNNATC	1 cut(s)	1470
BseBI	CCWGG	3 cut(s)	252, 1251, 1694
BseCI	ATCGAT	1 cut(s)	1088
BseDI	CCNNGG	2 cut(s)	591, 1587
BseGI	GGATG	5 cut(s)	468, 611, 813, 949, 1618
BseJI	GATNNNNATC	1 cut(s)	1470
BseLI	CCNNNNNNNGG	1 cut(s)	313
BseMI	GCAATG	1 cut(s)	707
BseMII	CTCAG	4 cut(s)	528, 822, 1109, 1179
BseNI	ACTGG	1 cut(s)	318
BseRI	GAGGAG	2 cut(s)	608, 1396
BseXI	GCAGC	7 cut(s)	59, 553, 1033, 1132, 1348, 1370, 1409
BseYI	CCCAGC	2 cut(s)	667, 983
Bsh1236I	CGCG	3 cut(s)	36, 1128, 1635
Bsh1285I	CGRYCG	1 cut(s)	1524
BshFI	GGCC	3 cut(s)	782, 953, 1022
BshVI	ATCGAT	1 cut(s)	1088
BsiEI	CGRYCG	1 cut(s)	1524
BsiHKAI	GWGCWC	3 cut(s)	21, 405, 1463
BsiHKCI	CYCGRG	1 cut(s)	1456
BsiSI	CCGG	1 cut(s)	950
BslFI	GGGAC	2 cut(s)	1307, 1691
BslI	CCNNNNNNNGG	1 cut(s)	313
BsmAI	GTCTC	1 cut(s)	426
BsmFI	GGGAC	2 cut(s)	1307, 1691
BsnI	GGCC	3 cut(s)	782, 953, 1022
BsoBI	CYCGRG	1 cut(s)	1456
Bsp1286I	GDGCHC	3 cut(s)	21, 405, 1463
Bsp1720I	GCTNAGC	1 cut(s)	1331
Bsp19I	CCATGG	2 cut(s)	591, 1587
Bsp68I	TCGCGA	1 cut(s)	1128
BspACI	CCGC	5 cut(s)	94, 156, 645, 1153, 1633
BspANI	GGCC	3 cut(s)	782, 953, 1022
BspCNI	CTCAG	4 cut(s)	529, 823, 1110, 1180
BspDI	ATCGAT	1 cut(s)	1088
BspFNI	CGCG	3 cut(s)	36, 1128, 1635
BspHI	TCATGA	1 cut(s)	450
BspLI	GGNNCC	4 cut(s)	954, 1023, 1255, 1405
BspMAI	CTGCAG	1 cut(s)	370
BspOI	GCTAGC	1 cut(s)	162
BspPI	GGATC	2 cut(s)	309, 941
BspQI	GCTCTTC	1 cut(s)	169
BsrDI	GCAATG	1 cut(s)	707
BsrI	ACTGG	1 cut(s)	318
BssECI	CCNNGG	2 cut(s)	591, 1587
BssT1I	CCWWGG	2 cut(s)	591, 1587
Bst2UI	CCWGG	3 cut(s)	252, 1251, 1694
Bst4CI	ACNGT	3 cut(s)	113, 508, 1432
Bst6I	CTCTTC	3 cut(s)	169, 626, 1076
BstAPI	GCANNNNNTGC	1 cut(s)	866
BstBAI	YACGTR	3 cut(s)	283, 503, 1064
BstC8I	GCNNGC	4 cut(s)	160, 789, 1143, 1402
BstDEI	CTNAG	6 cut(s)	308, 537, 831, 1118, 1188, 1331
BstDSI	CCRYGG	2 cut(s)	591, 1587
BstF5I	GGATG	5 cut(s)	468, 611, 813, 949, 1618
BstFNI	CGCG	3 cut(s)	36, 1128, 1635
BstH2I	RGCGCY	1 cut(s)	1047
BstHHI	GCGC	3 cut(s)	38, 1046, 1194
BstMAI	GTCTC	1 cut(s)	426
BstMCI	CGRYCG	1 cut(s)	1524
BstMWI	GCNNNNNNNGC	5 cut(s)	788, 866, 1055, 1198, 1724
BstNI	CCWGG	3 cut(s)	252, 1251, 1694
BstNSI	RCATGY	1 cut(s)	1448
BstSCI	CCNGG	3 cut(s)	250, 1249, 1692
BstSFI	CTRYAG	2 cut(s)	366, 481
BstSNI	TACGTA	2 cut(s)	283, 1064
BstUI	CGCG	3 cut(s)	36, 1128, 1635
BstV1I	GCAGC	7 cut(s)	59, 553, 1033, 1132, 1348, 1370, 1409
BstX2I	RGATCY	1 cut(s)	301
BstYI	RGATCY	1 cut(s)	301
Bsu15I	ATCGAT	1 cut(s)	1088
BsuRI	GGCC	3 cut(s)	782, 953, 1022
BsuTUI	ATCGAT	1 cut(s)	1088
BtgI	CCRYGG	2 cut(s)	591, 1587
BtgZI	GCGATG	1 cut(s)	996
BtsCI	GGATG	5 cut(s)	468, 611, 813, 949, 1618
BtsI	GCAGTG	3 cut(s)	6, 994, 1707
BtsIMutI	CAGTG	4 cut(s)	6, 994, 1281, 1707
BtuMI	TCGCGA	1 cut(s)	1128
Cac8I	GCNNGC	4 cut(s)	160, 789, 1143, 1402
CaiI	CAGNNNCTG	1 cut(s)	830
CciI	TCATGA	1 cut(s)	450
CfoI	GCGC	3 cut(s)	38, 1046, 1194
Cfr13I	GGNCC	3 cut(s)	176, 952, 1021
ClaI	ATCGAT	1 cut(s)	1088
Csp6I	GTAC	7 cut(s)	504, 522, 750, 762, 926, 1061, 1599
CviAII	CATG	6 cut(s)	376, 451, 592, 784, 1445, 1588
CviQI	GTAC	7 cut(s)	504, 522, 750, 762, 926, 1061, 1599
DdeI	CTNAG	6 cut(s)	308, 537, 831, 1118, 1188, 1331
DraI	TTTAAA	1 cut(s)	1311
Eam1104I	CTCTTC	3 cut(s)	169, 626, 1076
EarI	CTCTTC	3 cut(s)	169, 626, 1076
Ecl136II	GAGCTC	2 cut(s)	19, 403
Eco105I	TACGTA	2 cut(s)	283, 1064
Eco130I	CCWWGG	2 cut(s)	591, 1587
Eco24I	GRGCYC	2 cut(s)	21, 405
Eco32I	GATATC	1 cut(s)	1185
Eco47I	GGWCC	1 cut(s)	176
Eco53kI	GAGCTC	2 cut(s)	19, 403
Eco57I	CTGAAG	1 cut(s)	247
Eco88I	CYCGRG	1 cut(s)	1456
EcoICRI	GAGCTC	2 cut(s)	19, 403
EcoRI	GAATTC	3 cut(s)	801, 1122, 1550
EcoRII	CCWGG	3 cut(s)	250, 1249, 1692
EcoRV	GATATC	1 cut(s)	1185
EcoT14I	CCWWGG	2 cut(s)	591, 1587
EcoT38I	GRGCYC	2 cut(s)	21, 405
ErhI	CCWWGG	2 cut(s)	591, 1587
FaeI	CATG	6 cut(s)	379, 454, 595, 787, 1448, 1591
FaqI	GGGAC	2 cut(s)	1307, 1691
FatI	CATG	6 cut(s)	375, 450, 591, 783, 1444, 1587
FauI	CCCGC	2 cut(s)	163, 1160
FauNDI	CATATG	1 cut(s)	1179
FbaI	TGATCA	3 cut(s)	447, 673, 1660
Fnu4HI	GCNGC	7 cut(s)	73, 542, 1047, 1146, 1359, 1362, 1398
FokI	GGATG	5 cut(s)	475, 598, 800, 956, 1605
FriOI	GRGCYC	2 cut(s)	21, 405
Fsp4HI	GCNGC	7 cut(s)	73, 542, 1047, 1146, 1359, 1362, 1398
FspBI	CTAG	8 cut(s)	159, 180, 185, 525, 753, 957, 963, 1305
GlaI	GCGC	3 cut(s)	37, 1045, 1193
GluI	GCNGC	7 cut(s)	73, 542, 1047, 1146, 1359, 1362, 1398
GsaI	CCCAGC	2 cut(s)	671, 987
GsuI	CTGGAG	1 cut(s)	915
HaeII	RGCGCY	1 cut(s)	1047
HaeIII	GGCC	3 cut(s)	782, 953, 1022
HapII	CCGG	1 cut(s)	950
HhaI	GCGC	3 cut(s)	38, 1046, 1194
Hin1II	CATG	6 cut(s)	379, 454, 595, 787, 1448, 1591
Hin6I	GCGC	3 cut(s)	36, 1044, 1192
HinP1I	GCGC	3 cut(s)	36, 1044, 1192
HindIII	AAGCTT	3 cut(s)	474, 1105, 1219
HinfI	GANTC	4 cut(s)	255, 1435, 1542, 1682
HpaII	CCGG	1 cut(s)	950
HphI	GGTGA	3 cut(s)	717, 879, 1090
Hpy188I	TCNGA	3 cut(s)	192, 333, 1189
Hpy99I	CGWCG	2 cut(s)	26, 206
HpyCH4III	ACNGT	3 cut(s)	113, 508, 1432
HpyCH4IV	ACGT	4 cut(s)	282, 432, 502, 1063
HpyF10VI	GCNNNNNNNGC	5 cut(s)	788, 866, 1055, 1198, 1724
HpyF3I	CTNAG	6 cut(s)	308, 537, 831, 1118, 1188, 1331
HpySE526I	ACGT	4 cut(s)	282, 432, 502, 1063
Hsp92II	CATG	6 cut(s)	379, 454, 595, 787, 1448, 1591
HspAI	GCGC	3 cut(s)	36, 1044, 1192
Ksp22I	TGATCA	3 cut(s)	447, 673, 1660
LguI	GCTCTTC	1 cut(s)	169
LmnI	GCTCC	2 cut(s)	832, 1409
Lsp1109I	GCAGC	7 cut(s)	59, 553, 1033, 1132, 1348, 1370, 1409
LweI	GCATC	4 cut(s)	326, 832, 1183, 1280
MaeI	CTAG	8 cut(s)	159, 180, 185, 525, 753, 957, 963, 1305
MaeII	ACGT	4 cut(s)	282, 432, 502, 1063
MaeIII	GTNAC	2 cut(s)	1426, 1432
MfeI	CAATTG	1 cut(s)	717
MflI	RGATCY	1 cut(s)	301
MhlI	GDGCHC	3 cut(s)	21, 405, 1463
MlyI	GAGTC	2 cut(s)	1429, 1691
MroXI	GAANNNNTTC	2 cut(s)	246, 1221
MseI	TTAA	7 cut(s)	48, 360, 1109, 1301, 1310, 1566, 1649
MspA1I	CMGCKG	3 cut(s)	671, 1361, 1400
MspI	CCGG	1 cut(s)	950
MspR9I	CCNGG	3 cut(s)	252, 1251, 1694
MunI	CAATTG	1 cut(s)	717
MvaI	CCWGG	3 cut(s)	252, 1251, 1694
MvnI	CGCG	3 cut(s)	36, 1128, 1635
MwoI	GCNNNNNNNGC	5 cut(s)	788, 866, 1055, 1198, 1724
NcoI	CCATGG	2 cut(s)	591, 1587
NdeI	CATATG	1 cut(s)	1179
NheI	GCTAGC	1 cut(s)	158
NlaIII	CATG	6 cut(s)	379, 454, 595, 787, 1448, 1591
NlaIV	GGNNCC	4 cut(s)	954, 1023, 1255, 1405
NmeAIII	GCCGAG	1 cut(s)	384
NmuCI	GTSAC	1 cut(s)	1432
NruI	TCGCGA	1 cut(s)	1128
NspI	RCATGY	1 cut(s)	1448
PaeR7I	CTCGAG	1 cut(s)	1456
PagI	TCATGA	1 cut(s)	450
PciSI	GCTCTTC	1 cut(s)	169
PcsI	WCGNNNNNNNCGW	2 cut(s)	21, 1677
PdmI	GAANNNNTTC	2 cut(s)	246, 1221
PfeI	GAWTC	2 cut(s)	255, 1542
PflFI	GACNNNGTC	1 cut(s)	180
PfoI	TCCNGGA	3 cut(s)	250, 1249, 1692
PkrI	GCNGC	7 cut(s)	74, 543, 1048, 1147, 1360, 1363, 1399
PleI	GAGTC	2 cut(s)	1429, 1690
PpsI	GAGTC	2 cut(s)	1429, 1690
Ppu21I	YACGTR	3 cut(s)	283, 503, 1064
Psp124BI	GAGCTC	2 cut(s)	21, 405
Psp6I	CCWGG	3 cut(s)	250, 1249, 1692
PspFI	CCCAGC	2 cut(s)	667, 983
PspGI	CCWGG	3 cut(s)	250, 1249, 1692
PspN4I	GGNNCC	4 cut(s)	954, 1023, 1255, 1405
PspPI	GGNCC	3 cut(s)	176, 952, 1021
PspXI	VCTCGAGB	1 cut(s)	1456
PstI	CTGCAG	1 cut(s)	370
PstNI	CAGNNNCTG	1 cut(s)	830
PsuI	RGATCY	1 cut(s)	301
PsyI	GACNNNGTC	1 cut(s)	180
PvuII	CAGCTG	3 cut(s)	671, 1361, 1400
RruI	TCGCGA	1 cut(s)	1128
RsaI	GTAC	7 cut(s)	505, 523, 751, 763, 927, 1062, 1600
RsaNI	GTAC	7 cut(s)	504, 522, 750, 762, 926, 1061, 1599
SacI	GAGCTC	2 cut(s)	21, 405
SapI	GCTCTTC	1 cut(s)	169
SaqAI	TTAA	7 cut(s)	48, 360, 1109, 1301, 1310, 1566, 1649
SatI	GCNGC	7 cut(s)	73, 542, 1047, 1146, 1359, 1362, 1398
Sau96I	GGNCC	3 cut(s)	176, 952, 1021
ScaI	AGTACT	4 cut(s)	523, 751, 763, 1600
SchI	GAGTC	2 cut(s)	1429, 1691
ScrFI	CCNGG	3 cut(s)	252, 1251, 1694
SduI	GDGCHC	3 cut(s)	21, 405, 1463
SfaNI	GCATC	4 cut(s)	326, 832, 1183, 1280
SfcI	CTRYAG	2 cut(s)	366, 481
Sfr274I	CTCGAG	1 cut(s)	1456
SinI	GGWCC	1 cut(s)	176
SlaI	CTCGAG	1 cut(s)	1456
SmlI	CTYRAG	5 cut(s)	1099, 1317, 1456, 1573, 1642
SmoI	CTYRAG	5 cut(s)	1099, 1317, 1456, 1573, 1642
SnaBI	TACGTA	2 cut(s)	283, 1064
SpeI	ACTAGT	2 cut(s)	752, 1304
SsiI	CCGC	5 cut(s)	94, 156, 645, 1153, 1633
SspI	AATATT	1 cut(s)	608
SspMI	CTAG	8 cut(s)	159, 180, 185, 525, 753, 957, 963, 1305
SstI	GAGCTC	2 cut(s)	21, 405
StyD4I	CCNGG	3 cut(s)	250, 1249, 1692
StyI	CCWWGG	2 cut(s)	591, 1587
TaaI	ACNGT	3 cut(s)	113, 508, 1432
TaiI	ACGT	4 cut(s)	285, 435, 505, 1066
TaqII	GACCGA	1 cut(s)	1538
TatI	WGTACW	4 cut(s)	521, 749, 761, 1598
TfiI	GAWTC	2 cut(s)	255, 1542
Tru1I	TTAA	7 cut(s)	48, 360, 1109, 1301, 1310, 1566, 1649
Tru9I	TTAA	7 cut(s)	48, 360, 1109, 1301, 1310, 1566, 1649
TscAI	CASTG	4 cut(s)	13, 994, 1281, 1707
TseFI	GTSAC	1 cut(s)	1432
TseI	GCWGC	7 cut(s)	72, 541, 1046, 1145, 1358, 1361, 1397
Tsp45I	GTSAC	1 cut(s)	1432
TspDTI	ATGAA	8 cut(s)	156, 255, 364, 443, 600, 693, 885, 1214
TspRI	CASTG	4 cut(s)	13, 994, 1281, 1707
Tth111I	GACNNNGTC	1 cut(s)	180
VpaK11BI	GGWCC	1 cut(s)	176
XapI	RAATTY	5 cut(s)	327, 801, 1111, 1122, 1550
XceI	RCATGY	1 cut(s)	1448
XhoI	CTCGAG	1 cut(s)	1456
XmnI	GAANNNNTTC	2 cut(s)	246, 1221
XspI	CTAG	8 cut(s)	159, 180, 185, 525, 753, 957, 963, 1305
ZrmI	AGTACT	4 cut(s)	523, 751, 763, 1600

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.