RchiOBHm_Chr2g0134111

External alternative NAD(P)H-ubiquinone oxidoreductase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
51098965 .. 51101601
2637 bp
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UTR
Exon/CDS
Intron
PRQ50519

Sequence Viewer

Length: 159 bp
ATGTGGAAAGAAAGAAGGTCGGCTGGAACAACTTTCTCAAGGAATCTGAAAAATTTCTCATATGATGTTCATGTCGTATCTCCTCGGAATTATTTTGCATTCGCCCCTTTACGACCAAGTGTTACCTGTGGAACTGTGGAGCCTTTGGAGCATTGTTGA

Protein Analysis

52

Amino Acids

6.0

Weight (kDa)

9.3

Isoelectric Point (pI)

59.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 52
ApoI RAATTY 1 cut(s) 52
Asp700I GAANNNNTTC 1 cut(s) 53
BmiI GGNNCC 1 cut(s) 141
BpuEI CTTGAG 1 cut(s) 22
BsaJI CCNNGG 1 cut(s) 83
BseDI CCNNGG 1 cut(s) 83
BseRI GAGGAG 1 cut(s) 72
BsmI GAATGC 1 cut(s) 98
BspLI GGNNCC 1 cut(s) 141
BssECI CCNNGG 1 cut(s) 83
Bst4CI ACNGT 1 cut(s) 136
BstMWI GCNNNNNNNGC 1 cut(s) 148
CviAII CATG 1 cut(s) 71
CviJI RGCY 2 cut(s) 23, 142
CviKI_1 RGCY 2 cut(s) 23, 142
FaeI CATG 1 cut(s) 74
FaiI YATR 3 cut(s) 61, 63, 72
FatI CATG 1 cut(s) 70
FauNDI CATATG 1 cut(s) 61
Hin1II CATG 1 cut(s) 74
HinfI GANTC 1 cut(s) 43
Hpy188I TCNGA 2 cut(s) 48, 87
HpyAV CCTTC 1 cut(s) 9
HpyCH4III ACNGT 1 cut(s) 136
HpyCH4V TGCA 1 cut(s) 98
HpyF10VI GCNNNNNNNGC 1 cut(s) 148
Hsp92II CATG 1 cut(s) 74
LmnI GCTCC 2 cut(s) 139, 148
LpnPI CCDG 2 cut(s) 9, 139
MaeIII GTNAC 1 cut(s) 121
MluCI AATT 2 cut(s) 52, 88
MnlI CCTC 1 cut(s) 93
MroXI GAANNNNTTC 1 cut(s) 53
Mva1269I GAATGC 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 148
NdeI CATATG 1 cut(s) 61
NlaIII CATG 1 cut(s) 74
NlaIV GGNNCC 1 cut(s) 141
PctI GAATGC 1 cut(s) 98
PdmI GAANNNNTTC 1 cut(s) 53
PfeI GAWTC 1 cut(s) 43
PspN4I GGNNCC 1 cut(s) 141
SetI ASST 2 cut(s) 20, 128
SgeI CNNG 6 cut(s) 36, 51, 83, 96, 129, 138
SmlI CTYRAG 1 cut(s) 37
SmoI CTYRAG 1 cut(s) 37
Sse9I AATT 2 cut(s) 52, 88
TaaI ACNGT 1 cut(s) 136
TasI AATT 2 cut(s) 52, 88
TfiI GAWTC 1 cut(s) 43
TspDTI ATGAA 1 cut(s) 59
XapI RAATTY 1 cut(s) 52
XmnI GAANNNNTTC 1 cut(s) 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.