External alternative NAD(P)H-ubiquinone oxidoreductase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g28410 FvH4_4g00590 |
| rosa_chinensis | RchiOBHm_Chr2g0134111 RchiOBHm_Chr5g0002031 RchiOBHm_Chr7g0215551 RchiOBHm_Chr7g0228431 |
| rosa_laevigata | RLG00000019702 RLG00000022667 RLG00000034803 |
| rosa_multiflora | Rmu_sc0039029.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00026190 Rroxscaffold_1G00035480 Rroxscaffold_3G00255880 Rroxscaffold_3G00259100 Rroxscaffold_5G00358790 Rroxscaffold_6G00410130 |
| rosa_rugosa | Rorug05G0224200 |
| rosa_samantha | Rh2AG558900 Rh3AG286500 Rh5AG156600 Rh5AG305700 Rh5DG047000 Rh5DG343000 |
| rosa_wichuraiana | Rw5G031880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 173 |
| AcsI | RAATTY | 2 cut(s) | 81, 277 |
| AgsI | TTSAA | 1 cut(s) | 164 |
| Alw21I | GWGCWC | 1 cut(s) | 229 |
| Alw44I | GTGCAC | 1 cut(s) | 225 |
| ApaLI | GTGCAC | 1 cut(s) | 225 |
| ApoI | RAATTY | 2 cut(s) | 81, 277 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 47, 278 |
| BaeGI | GKGCMC | 1 cut(s) | 229 |
| Bbv12I | GWGCWC | 1 cut(s) | 229 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 58, 92 |
| BclI | TGATCA | 1 cut(s) | 216 |
| BisI | GCNGC | 1 cut(s) | 174 |
| BlsI | GCNGC | 1 cut(s) | 175 |
| BmiI | GGNNCC | 1 cut(s) | 366 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 32 |
| BpuEI | CTTGAG | 3 cut(s) | 176, 186, 247 |
| BsaJI | CCNNGG | 1 cut(s) | 308 |
| BseDI | CCNNGG | 1 cut(s) | 308 |
| BseSI | GKGCMC | 1 cut(s) | 229 |
| BsiHKAI | GWGCWC | 1 cut(s) | 229 |
| BsmI | GAATGC | 1 cut(s) | 323 |
| Bsp1286I | GDGCHC | 1 cut(s) | 229 |
| Bsp143I | GATC | 1 cut(s) | 216 |
| BspACI | CCGC | 1 cut(s) | 173 |
| BspLI | GGNNCC | 1 cut(s) | 366 |
| BssECI | CCNNGG | 1 cut(s) | 308 |
| BssMI | GATC | 1 cut(s) | 216 |
| BssT1I | CCWWGG | 1 cut(s) | 308 |
| Bst4CI | ACNGT | 1 cut(s) | 361 |
| BstDEI | CTNAG | 1 cut(s) | 369 |
| BstKTI | GATC | 1 cut(s) | 219 |
| BstMBI | GATC | 1 cut(s) | 216 |
| BstSLI | GKGCMC | 1 cut(s) | 229 |
| BtsIMutI | CAGTG | 1 cut(s) | 226 |
| CviAII | CATG | 2 cut(s) | 86, 296 |
| CviJI | RGCY | 5 cut(s) | 38, 176, 184, 248, 367 |
| CviKI_1 | RGCY | 5 cut(s) | 38, 176, 184, 248, 367 |
| DdeI | CTNAG | 1 cut(s) | 369 |
| DpnI | GATC | 1 cut(s) | 218 |
| DpnII | GATC | 1 cut(s) | 216 |
| Eco130I | CCWWGG | 1 cut(s) | 308 |
| EcoRI | GAATTC | 1 cut(s) | 81 |
| EcoT14I | CCWWGG | 1 cut(s) | 308 |
| ErhI | CCWWGG | 1 cut(s) | 308 |
| FaeI | CATG | 2 cut(s) | 89, 299 |
| FatI | CATG | 2 cut(s) | 85, 295 |
| FauNDI | CATATG | 1 cut(s) | 286 |
| FbaI | TGATCA | 1 cut(s) | 216 |
| Fnu4HI | GCNGC | 1 cut(s) | 174 |
| Fsp4HI | GCNGC | 1 cut(s) | 174 |
| GluI | GCNGC | 1 cut(s) | 174 |
| Hin1II | CATG | 2 cut(s) | 89, 299 |
| HinfI | GANTC | 2 cut(s) | 206, 268 |
| Hpy166II | GTNNAC | 1 cut(s) | 227 |
| Hpy188I | TCNGA | 3 cut(s) | 80, 211, 273 |
| Hpy188III | TCNNGA | 1 cut(s) | 203 |
| Hpy8I | GTNNAC | 1 cut(s) | 227 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4III | ACNGT | 1 cut(s) | 361 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 227, 323 |
| HpyF3I | CTNAG | 1 cut(s) | 369 |
| Hsp92II | CATG | 2 cut(s) | 89, 299 |
| Ksp22I | TGATCA | 1 cut(s) | 216 |
| Kzo9I | GATC | 1 cut(s) | 216 |
| LmnI | GCTCC | 1 cut(s) | 364 |
| LpnPI | CCDG | 5 cut(s) | 128, 227, 234, 243, 364 |
| MaeIII | GTNAC | 1 cut(s) | 346 |
| MalI | GATC | 1 cut(s) | 218 |
| MboI | GATC | 1 cut(s) | 216 |
| MhlI | GDGCHC | 1 cut(s) | 229 |
| MluCI | AATT | 4 cut(s) | 81, 151, 277, 313 |
| MlyI | GAGTC | 1 cut(s) | 200 |
| MmeI | TCCRAC | 2 cut(s) | 58, 234 |
| MroXI | GAANNNNTTC | 2 cut(s) | 47, 278 |
| MseI | TTAA | 1 cut(s) | 150 |
| Mva1269I | GAATGC | 1 cut(s) | 323 |
| NdeI | CATATG | 1 cut(s) | 286 |
| NdeII | GATC | 1 cut(s) | 216 |
| NlaIII | CATG | 2 cut(s) | 89, 299 |
| NlaIV | GGNNCC | 1 cut(s) | 366 |
| PctI | GAATGC | 1 cut(s) | 323 |
| PdmI | GAANNNNTTC | 2 cut(s) | 47, 278 |
| PfeI | GAWTC | 1 cut(s) | 268 |
| PkrI | GCNGC | 1 cut(s) | 175 |
| PleI | GAGTC | 1 cut(s) | 200 |
| PpsI | GAGTC | 1 cut(s) | 200 |
| PspN4I | GGNNCC | 1 cut(s) | 366 |
| SaqAI | TTAA | 1 cut(s) | 150 |
| SatI | GCNGC | 1 cut(s) | 174 |
| Sau3AI | GATC | 1 cut(s) | 216 |
| SchI | GAGTC | 1 cut(s) | 200 |
| SduI | GDGCHC | 1 cut(s) | 229 |
| SetI | ASST | 5 cut(s) | 123, 216, 232, 245, 353 |
| SmlI | CTYRAG | 3 cut(s) | 191, 201, 262 |
| SmoI | CTYRAG | 3 cut(s) | 191, 201, 262 |
| Sse9I | AATT | 4 cut(s) | 81, 151, 277, 313 |
| SsiI | CCGC | 1 cut(s) | 173 |
| StyI | CCWWGG | 1 cut(s) | 308 |
| TaaI | ACNGT | 1 cut(s) | 361 |
| TasI | AATT | 4 cut(s) | 81, 151, 277, 313 |
| TauI | GCSGC | 1 cut(s) | 176 |
| TfiI | GAWTC | 1 cut(s) | 268 |
| Tru1I | TTAA | 1 cut(s) | 150 |
| Tru9I | TTAA | 1 cut(s) | 150 |
| TscAI | CASTG | 1 cut(s) | 226 |
| TspDTI | ATGAA | 4 cut(s) | 56, 74, 91, 284 |
| TspRI | CASTG | 1 cut(s) | 226 |
| VneI | GTGCAC | 1 cut(s) | 225 |
| XapI | RAATTY | 2 cut(s) | 81, 277 |
| XmnI | GAANNNNTTC | 2 cut(s) | 47, 278 |