RchiOBHm_Chr2g0141841

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
59389183 .. 59389568
386 bp
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UTR
Exon/CDS
Intron
PRQ51209

Sequence Viewer

Length: 177 bp
ATGAAGGTTATATTTACAATTTTTGTTTTGGGTATATTGTTCCCTTTTATTTATCTGTTGTCATTAACAATGGAACATACTTCTTTCCAGACACTTTTACATTATGTTCCTGCAGGGAGGGTGGTAGTCCTTGATCTGTTTGCTGAAATGAAACTGATATGTGAATTGAACTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.7

Weight (kDa)

5.99

Isoelectric Point (pI)

27.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018162)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 1 cut(s) 169
BfmI CTRYAG 1 cut(s) 111
Bsp143I GATC 1 cut(s) 133
BspMAI CTGCAG 1 cut(s) 115
BssMI GATC 1 cut(s) 133
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstSFI CTRYAG 1 cut(s) 111
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
FaiI YATR 5 cut(s) 11, 35, 78, 105, 160
Hpy188III TCNNGA 1 cut(s) 88
HpyCH4V TGCA 1 cut(s) 113
Kzo9I GATC 1 cut(s) 133
LpnPI CCDG 3 cut(s) 99, 101, 123
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MluCI AATT 2 cut(s) 18, 164
MnlI CCTC 1 cut(s) 111
MseI TTAA 1 cut(s) 65
NdeII GATC 1 cut(s) 133
PstI CTGCAG 1 cut(s) 115
SaqAI TTAA 1 cut(s) 65
Sau3AI GATC 1 cut(s) 133
SbfI CCTGCAGG 1 cut(s) 115
SdaI CCTGCAGG 1 cut(s) 115
SetI ASST 1 cut(s) 9
SfcI CTRYAG 1 cut(s) 111
SgeI CNNG 4 cut(s) 100, 122, 126, 143
Sse8387I CCTGCAGG 1 cut(s) 115
Sse9I AATT 2 cut(s) 18, 164
TasI AATT 2 cut(s) 18, 164
Tru1I TTAA 1 cut(s) 65
Tru9I TTAA 1 cut(s) 65
TspDTI ATGAA 2 cut(s) 17, 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.