Rh1AG474200

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Reverse (-)
68526541 .. 68526741
201 bp
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UTR
Exon/CDS
Intron
Rh1AG474200.1

Sequence Viewer

Length: 201 bp
ATGTGGTGGCTTTGGCCGCTTTATCTTGTGGTGGTGGGGCTGGAGATGAAGAGGCGGTGGCTTTGGGTCCGGGTCCGGATGATTGGGCATGGTGGCCTTGTCACCAATGCGGTGTTCCTTTCGGGGATGTGGTCTGCTTTGTTAGAACTGGCGGTGGTCTTGGTGTTGGCGGTGGTAATCGAGGCTATGGACTGTGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.6

Weight (kDa)

7.98

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018162)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 75
AciI CCGC 5 cut(s) 17, 55, 110, 152, 170
AcoI YGGCCR 1 cut(s) 14
AjuI GAANNNNNNNTTGG 2 cut(s) 98, 130
Aor13HI TCCGGA 1 cut(s) 75
AoxI GGCC 2 cut(s) 14, 94
AspS9I GGNCC 2 cut(s) 67, 73
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 1 cut(s) 94
AvaII GGWCC 2 cut(s) 67, 73
BcnI CCSGG 1 cut(s) 71
BisI GCNGC 1 cut(s) 17
BlsI GCNGC 1 cut(s) 18
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 2 cut(s) 67, 73
BmgT120I GGNCC 2 cut(s) 67, 73
BmiI GGNNCC 2 cut(s) 68, 74
BmrFI CCNGG 1 cut(s) 71
BpmI CTGGAG 1 cut(s) 62
BpuMI CCSGG 1 cut(s) 71
BsaWI WCCGGW 1 cut(s) 75
Bse1I ACTGG 1 cut(s) 153
BseAI TCCGGA 1 cut(s) 75
BseGI GGATG 2 cut(s) 84, 132
BseNI ACTGG 1 cut(s) 153
BshFI GGCC 2 cut(s) 16, 96
BsiSI CCGG 2 cut(s) 70, 76
BsnI GGCC 2 cut(s) 16, 96
Bsp13I TCCGGA 1 cut(s) 75
BspACI CCGC 5 cut(s) 17, 55, 110, 152, 170
BspANI GGCC 2 cut(s) 16, 96
BspEI TCCGGA 1 cut(s) 75
BspLI GGNNCC 2 cut(s) 68, 74
BsrI ACTGG 1 cut(s) 153
Bst4CI ACNGT 1 cut(s) 194
Bst6I CTCTTC 1 cut(s) 44
BstF5I GGATG 2 cut(s) 84, 132
BstMWI GCNNNNNNNGC 1 cut(s) 16
BstSCI CCNGG 1 cut(s) 69
BsuRI GGCC 2 cut(s) 16, 96
BtsCI GGATG 2 cut(s) 84, 132
Cfr13I GGNCC 2 cut(s) 67, 73
CviAII CATG 1 cut(s) 89
CviJI RGCY 6 cut(s) 10, 16, 40, 61, 96, 185
CviKI_1 RGCY 6 cut(s) 10, 16, 40, 61, 96, 185
EaeI YGGCCR 1 cut(s) 14
Eam1104I CTCTTC 1 cut(s) 44
EarI CTCTTC 1 cut(s) 44
Eco47I GGWCC 2 cut(s) 67, 73
FaeI CATG 1 cut(s) 92
FaiI YATR 2 cut(s) 90, 188
FatI CATG 1 cut(s) 88
Fnu4HI GCNGC 1 cut(s) 17
FokI GGATG 2 cut(s) 91, 139
Fsp4HI GCNGC 1 cut(s) 17
GluI GCNGC 1 cut(s) 17
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 2 cut(s) 16, 96
HapII CCGG 2 cut(s) 70, 76
Hin1II CATG 1 cut(s) 92
HpaII CCGG 2 cut(s) 70, 76
HphI GGTGA 1 cut(s) 94
Hpy188III TCNNGA 1 cut(s) 76
HpyCH4III ACNGT 1 cut(s) 194
HpyF10VI GCNNNNNNNGC 1 cut(s) 16
Hsp92II CATG 1 cut(s) 92
Kpn2I TCCGGA 1 cut(s) 75
LpnPI CCDG 4 cut(s) 26, 83, 89, 134
MaeIII GTNAC 1 cut(s) 100
MboII GAAGA 1 cut(s) 61
MnlI CCTC 2 cut(s) 45, 175
MroI TCCGGA 1 cut(s) 75
MspI CCGG 2 cut(s) 70, 76
MspR9I CCNGG 1 cut(s) 71
MwoI GCNNNNNNNGC 1 cut(s) 16
NciI CCSGG 1 cut(s) 71
NlaIII CATG 1 cut(s) 92
NlaIV GGNNCC 2 cut(s) 68, 74
NmuCI GTSAC 1 cut(s) 100
PkrI GCNGC 1 cut(s) 18
PspN4I GGNNCC 2 cut(s) 68, 74
PspPI GGNCC 2 cut(s) 67, 73
SatI GCNGC 1 cut(s) 17
Sau96I GGNCC 2 cut(s) 67, 73
ScrFI CCNGG 1 cut(s) 71
SinI GGWCC 2 cut(s) 67, 73
SsiI CCGC 5 cut(s) 17, 55, 110, 152, 170
StyD4I CCNGG 1 cut(s) 69
TaaI ACNGT 1 cut(s) 194
TaqI TCGA 1 cut(s) 180
TauI GCSGC 1 cut(s) 19
TseFI GTSAC 1 cut(s) 100
Tsp45I GTSAC 1 cut(s) 100
TspDTI ATGAA 1 cut(s) 62
VpaK11BI GGWCC 2 cut(s) 67, 73
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.