RchiOBHm_Chr3g0494761

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
43676510 .. 43676746
237 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45727

Sequence Viewer

Length: 177 bp
ATGAAGGTTATATTTACAATTTTTGTTTTGGGTATATTGTTCCCTTTTATTTATCTGTTGTCATTAACAATGGAACATACTTCTTTCCAGACACTTTTACATTATGTTCCTGCAGGGAGGGTGGTAGTACTTGATCTGTTTGCTGAAATGAAACTGATATGTGAATTGAACTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

58

Amino Acids

6.7

Weight (kDa)

5.99

Isoelectric Point (pI)

27.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018162)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 129
AgsI TTSAA 1 cut(s) 169
BfmI CTRYAG 1 cut(s) 111
BmcAI AGTACT 1 cut(s) 129
Bsp143I GATC 1 cut(s) 133
BspMAI CTGCAG 1 cut(s) 115
BssMI GATC 1 cut(s) 133
BstKTI GATC 1 cut(s) 136
BstMBI GATC 1 cut(s) 133
BstSFI CTRYAG 1 cut(s) 111
Csp6I GTAC 1 cut(s) 128
CviQI GTAC 1 cut(s) 128
DpnI GATC 1 cut(s) 135
DpnII GATC 1 cut(s) 133
FaiI YATR 5 cut(s) 11, 35, 78, 105, 160
Hpy188III TCNNGA 1 cut(s) 88
HpyCH4V TGCA 1 cut(s) 113
Kzo9I GATC 1 cut(s) 133
LpnPI CCDG 3 cut(s) 99, 101, 123
MalI GATC 1 cut(s) 135
MboI GATC 1 cut(s) 133
MluCI AATT 2 cut(s) 18, 164
MnlI CCTC 1 cut(s) 111
MseI TTAA 1 cut(s) 65
NdeII GATC 1 cut(s) 133
PstI CTGCAG 1 cut(s) 115
RsaI GTAC 1 cut(s) 129
RsaNI GTAC 1 cut(s) 128
SaqAI TTAA 1 cut(s) 65
Sau3AI GATC 1 cut(s) 133
SbfI CCTGCAGG 1 cut(s) 115
ScaI AGTACT 1 cut(s) 129
SdaI CCTGCAGG 1 cut(s) 115
SetI ASST 1 cut(s) 9
SfcI CTRYAG 1 cut(s) 111
SgeI CNNG 4 cut(s) 100, 122, 126, 143
Sse8387I CCTGCAGG 1 cut(s) 115
Sse9I AATT 2 cut(s) 18, 164
TasI AATT 2 cut(s) 18, 164
TatI WGTACW 1 cut(s) 127
Tru1I TTAA 1 cut(s) 65
Tru9I TTAA 1 cut(s) 65
TspDTI ATGAA 2 cut(s) 17, 164
ZrmI AGTACT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.