No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0141841 RchiOBHm_Chr3g0494761 |
| rosa_laevigata | RLG00000003330 RLG00000008543 RLG00000013377 |
| rosa_multiflora | Rmu_sc0005167.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00113890 |
| rosa_samantha | Rh1AG474200 Rh5BG541900 Rh6BG134800 |
| rosa_wichuraiana | Rw6G043620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 284 |
| AclWI | GGATC | 1 cut(s) | 275 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 66 |
| AgsI | TTSAA | 4 cut(s) | 78, 95, 179, 195 |
| AluBI | AGCT | 1 cut(s) | 125 |
| AluI | AGCT | 1 cut(s) | 125 |
| Alw26I | GTCTC | 3 cut(s) | 75, 163, 251 |
| AlwI | GGATC | 1 cut(s) | 275 |
| AoxI | GGCC | 1 cut(s) | 104 |
| AspLEI | GCGC | 1 cut(s) | 285 |
| AspS9I | GGNCC | 1 cut(s) | 104 |
| AsuHPI | GGTGA | 2 cut(s) | 121, 242 |
| BcoDI | GTCTC | 3 cut(s) | 75, 163, 251 |
| BmgT120I | GGNCC | 1 cut(s) | 104 |
| BpmI | CTGGAG | 1 cut(s) | 319 |
| BsaI | GGTCTC | 3 cut(s) | 75, 163, 251 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 66 |
| Bse118I | RCCGGY | 1 cut(s) | 106 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 66 |
| BseMII | CTCAG | 1 cut(s) | 135 |
| BseYI | CCCAGC | 1 cut(s) | 289 |
| BshFI | GGCC | 1 cut(s) | 106 |
| BsiSI | CCGG | 1 cut(s) | 107 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 66 |
| BsmAI | GTCTC | 3 cut(s) | 75, 163, 251 |
| BsnI | GGCC | 1 cut(s) | 106 |
| Bso31I | GGTCTC | 3 cut(s) | 75, 163, 251 |
| Bsp143I | GATC | 1 cut(s) | 267 |
| BspANI | GGCC | 1 cut(s) | 106 |
| BspCNI | CTCAG | 1 cut(s) | 134 |
| BspPI | GGATC | 1 cut(s) | 275 |
| BspTNI | GGTCTC | 3 cut(s) | 75, 163, 251 |
| BsrFI | RCCGGY | 1 cut(s) | 106 |
| BssAI | RCCGGY | 1 cut(s) | 106 |
| BssMI | GATC | 1 cut(s) | 267 |
| Bst6I | CTCTTC | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 1 cut(s) | 287 |
| BstDEI | CTNAG | 1 cut(s) | 121 |
| BstHHI | GCGC | 1 cut(s) | 285 |
| BstKTI | GATC | 1 cut(s) | 270 |
| BstMAI | GTCTC | 3 cut(s) | 75, 163, 251 |
| BstMBI | GATC | 1 cut(s) | 267 |
| BstNSI | RCATGY | 1 cut(s) | 289 |
| BstX2I | RGATCY | 1 cut(s) | 267 |
| BstYI | RGATCY | 1 cut(s) | 267 |
| BsuRI | GGCC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 1 cut(s) | 287 |
| CfoI | GCGC | 1 cut(s) | 285 |
| Cfr10I | RCCGGY | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 1 cut(s) | 104 |
| CviAII | CATG | 1 cut(s) | 286 |
| CviJI | RGCY | 3 cut(s) | 106, 125, 206 |
| CviKI_1 | RGCY | 3 cut(s) | 106, 125, 206 |
| DdeI | CTNAG | 1 cut(s) | 121 |
| DpnI | GATC | 1 cut(s) | 269 |
| DpnII | GATC | 1 cut(s) | 267 |
| Eam1104I | CTCTTC | 1 cut(s) | 49 |
| EarI | CTCTTC | 1 cut(s) | 49 |
| Eco31I | GGTCTC | 3 cut(s) | 75, 163, 251 |
| FaeI | CATG | 1 cut(s) | 289 |
| FaiI | YATR | 1 cut(s) | 287 |
| FatI | CATG | 1 cut(s) | 285 |
| FspI | TGCGCA | 1 cut(s) | 284 |
| GlaI | GCGC | 1 cut(s) | 284 |
| GsaI | CCCAGC | 1 cut(s) | 293 |
| GsuI | CTGGAG | 1 cut(s) | 319 |
| HaeIII | GGCC | 1 cut(s) | 106 |
| HapII | CCGG | 1 cut(s) | 107 |
| HhaI | GCGC | 1 cut(s) | 285 |
| Hin1II | CATG | 1 cut(s) | 289 |
| Hin6I | GCGC | 1 cut(s) | 283 |
| HinP1I | GCGC | 1 cut(s) | 283 |
| HinfI | GANTC | 2 cut(s) | 26, 191 |
| HpaII | CCGG | 1 cut(s) | 107 |
| HphI | GGTGA | 2 cut(s) | 121, 242 |
| Hpy188III | TCNNGA | 3 cut(s) | 48, 265, 298 |
| Hpy99I | CGWCG | 1 cut(s) | 37 |
| HpyF3I | CTNAG | 1 cut(s) | 121 |
| Hsp92II | CATG | 1 cut(s) | 289 |
| HspAI | GCGC | 1 cut(s) | 283 |
| Kzo9I | GATC | 1 cut(s) | 267 |
| LpnPI | CCDG | 8 cut(s) | 33, 87, 120, 139, 250, 275, 283, 300 |
| MaeIII | GTNAC | 1 cut(s) | 230 |
| MalI | GATC | 1 cut(s) | 269 |
| MboI | GATC | 1 cut(s) | 267 |
| MboII | GAAGA | 4 cut(s) | 21, 36, 83, 90 |
| MfeI | CAATTG | 1 cut(s) | 216 |
| MflI | RGATCY | 1 cut(s) | 267 |
| MluCI | AATT | 3 cut(s) | 78, 173, 216 |
| MnlI | CCTC | 2 cut(s) | 70, 223 |
| MspI | CCGG | 1 cut(s) | 107 |
| MunI | CAATTG | 1 cut(s) | 216 |
| NdeII | GATC | 1 cut(s) | 267 |
| NlaIII | CATG | 1 cut(s) | 289 |
| NmuCI | GTSAC | 1 cut(s) | 230 |
| NsbI | TGCGCA | 1 cut(s) | 284 |
| NspI | RCATGY | 1 cut(s) | 289 |
| PaeI | GCATGC | 1 cut(s) | 289 |
| PfeI | GAWTC | 2 cut(s) | 26, 191 |
| PspFI | CCCAGC | 1 cut(s) | 289 |
| PspPI | GGNCC | 1 cut(s) | 104 |
| PsuI | RGATCY | 1 cut(s) | 267 |
| Sau3AI | GATC | 1 cut(s) | 267 |
| Sau96I | GGNCC | 1 cut(s) | 104 |
| SetI | ASST | 1 cut(s) | 127 |
| SphI | GCATGC | 1 cut(s) | 289 |
| Sse9I | AATT | 3 cut(s) | 78, 173, 216 |
| TaqII | GACCGA | 1 cut(s) | 57 |
| TasI | AATT | 3 cut(s) | 78, 173, 216 |
| TfiI | GAWTC | 2 cut(s) | 26, 191 |
| TseFI | GTSAC | 1 cut(s) | 230 |
| Tsp45I | GTSAC | 1 cut(s) | 230 |
| XceI | RCATGY | 1 cut(s) | 289 |