No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0376031 RchiOBHm_Chr2g0152791 RchiOBHm_Chr3g0452491 RchiOBHm_Chr3g0479151 RchiOBHm_Chr6g0245701 |
| rosa_roxburghii | Rroxscaffold_2G00131820 Rroxscaffold_2G00144360 |
| rosa_rugosa | Rorug02G0533800 |
| rosa_samantha | Rh4CG020500 Rh4CG139900 Rh4CG140000 Rh4DG167800 Rh6AG032100 Rh6DG165900 |
| rosa_wichuraiana | Rw5G016190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 155 |
| AciI | CCGC | 2 cut(s) | 18, 140 |
| AcsI | RAATTY | 1 cut(s) | 109 |
| AgsI | TTSAA | 2 cut(s) | 67, 147 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 127, 159 |
| AluBI | AGCT | 2 cut(s) | 24, 83 |
| AluI | AGCT | 2 cut(s) | 24, 83 |
| Alw21I | GWGCWC | 1 cut(s) | 85 |
| ApeKI | GCWGC | 2 cut(s) | 21, 24 |
| ApoI | RAATTY | 1 cut(s) | 109 |
| AsuII | TTCGAA | 1 cut(s) | 107 |
| BanII | GRGCYC | 2 cut(s) | 61, 85 |
| Bbv12I | GWGCWC | 1 cut(s) | 85 |
| BbvI | GCAGC | 2 cut(s) | 11, 33 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 41, 75 |
| BfmI | CTRYAG | 1 cut(s) | 90 |
| BisI | GCNGC | 3 cut(s) | 19, 22, 25 |
| BlsI | GCNGC | 3 cut(s) | 20, 23, 26 |
| Bpu14I | TTCGAA | 1 cut(s) | 107 |
| BseXI | GCAGC | 2 cut(s) | 11, 33 |
| BsiHKAI | GWGCWC | 1 cut(s) | 85 |
| Bsp119I | TTCGAA | 1 cut(s) | 107 |
| Bsp1286I | GDGCHC | 2 cut(s) | 61, 85 |
| BspACI | CCGC | 2 cut(s) | 18, 140 |
| BspMAI | CTGCAG | 1 cut(s) | 94 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BspT104I | TTCGAA | 1 cut(s) | 107 |
| Bst4CI | ACNGT | 1 cut(s) | 71 |
| Bst6I | CTCTTC | 1 cut(s) | 128 |
| BstBI | TTCGAA | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 2 cut(s) | 61, 119 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 24, 89 |
| BstSFI | CTRYAG | 1 cut(s) | 90 |
| BstV1I | GCAGC | 2 cut(s) | 11, 33 |
| BtsIMutI | CAGTG | 1 cut(s) | 76 |
| Cac8I | GCNNGC | 2 cut(s) | 61, 119 |
| CviJI | RGCY | 3 cut(s) | 24, 59, 83 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 59, 83 |
| Eam1104I | CTCTTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 1 cut(s) | 128 |
| Ecl136II | GAGCTC | 1 cut(s) | 83 |
| Eco24I | GRGCYC | 2 cut(s) | 61, 85 |
| Eco53kI | GAGCTC | 1 cut(s) | 83 |
| EcoICRI | GAGCTC | 1 cut(s) | 83 |
| EcoT38I | GRGCYC | 2 cut(s) | 61, 85 |
| FaiI | YATR | 1 cut(s) | 115 |
| FauI | CCCGC | 1 cut(s) | 147 |
| FblI | GTMKAC | 1 cut(s) | 155 |
| Fnu4HI | GCNGC | 3 cut(s) | 19, 22, 25 |
| FriOI | GRGCYC | 2 cut(s) | 61, 85 |
| Fsp4HI | GCNGC | 3 cut(s) | 19, 22, 25 |
| GluI | GCNGC | 3 cut(s) | 19, 22, 25 |
| Hpy166II | GTNNAC | 1 cut(s) | 156 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 1 cut(s) | 156 |
| HpyAV | CCTTC | 1 cut(s) | 153 |
| HpyCH4III | ACNGT | 1 cut(s) | 71 |
| HpyCH4V | TGCA | 1 cut(s) | 92 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 24, 89 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| LpnPI | CCDG | 2 cut(s) | 29, 78 |
| Lsp1109I | GCAGC | 2 cut(s) | 11, 33 |
| MboII | GAAGA | 1 cut(s) | 115 |
| MhlI | GDGCHC | 2 cut(s) | 61, 85 |
| MluCI | AATT | 2 cut(s) | 97, 109 |
| MnlI | CCTC | 1 cut(s) | 48 |
| MspA1I | CMGCKG | 1 cut(s) | 24 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 24, 89 |
| NspV | TTCGAA | 1 cut(s) | 107 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PkrI | GCNGC | 3 cut(s) | 20, 23, 26 |
| Psp124BI | GAGCTC | 1 cut(s) | 85 |
| PstI | CTGCAG | 1 cut(s) | 94 |
| PvuII | CAGCTG | 1 cut(s) | 24 |
| SacI | GAGCTC | 1 cut(s) | 85 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| SatI | GCNGC | 3 cut(s) | 19, 22, 25 |
| SduI | GDGCHC | 2 cut(s) | 61, 85 |
| SetI | ASST | 3 cut(s) | 26, 85, 161 |
| SfcI | CTRYAG | 1 cut(s) | 90 |
| SfuI | TTCGAA | 1 cut(s) | 107 |
| SgeI | CNNG | 5 cut(s) | 56, 72, 105, 130, 151 |
| Sse9I | AATT | 2 cut(s) | 97, 109 |
| SsiI | CCGC | 2 cut(s) | 18, 140 |
| SstI | GAGCTC | 1 cut(s) | 85 |
| TaaI | ACNGT | 1 cut(s) | 71 |
| TaqI | TCGA | 2 cut(s) | 32, 107 |
| TasI | AATT | 2 cut(s) | 97, 109 |
| TauI | GCSGC | 1 cut(s) | 21 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseI | GCWGC | 2 cut(s) | 21, 24 |
| TspDTI | ATGAA | 1 cut(s) | 50 |
| TspGWI | ACGGA | 1 cut(s) | 141 |
| TspRI | CASTG | 1 cut(s) | 76 |
| XapI | RAATTY | 1 cut(s) | 109 |
| XmiI | GTMKAC | 1 cut(s) | 155 |