Rh6AG032100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Reverse (-)
3961230 .. 3985580
24351 bp
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UTR
Exon/CDS
Intron
Rh6AG032100.1

Sequence Viewer

Length: 201 bp
ATGTCAAGAGGTGCAATTGATATATTGTACCTGGTCGCTAAGATTGTTGCTAACTTCATTGTGAAGGGTCTGGTATTCCAGCAAGGTCGTAGTTCAGGCATATCGTCAGGCAATTACAAATATAAGCTTAAGCTATTAGGGAATGACTCAACTATATTTAACCTTACAATATCATGCCATTTTTGTTTCAGGCACTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.42

Weight (kDa)

9.76

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 29
AflII CTTAAG 1 cut(s) 128
AjnI CCWGG 1 cut(s) 30
AluBI AGCT 2 cut(s) 127, 133
AluI AGCT 2 cut(s) 127, 133
BciT130I CCWGG 1 cut(s) 32
BfrI CTTAAG 1 cut(s) 128
Bme1390I CCNGG 1 cut(s) 32
BmrFI CCNGG 1 cut(s) 32
BseBI CCWGG 1 cut(s) 32
BspTI CTTAAG 1 cut(s) 128
Bst2UI CCWGG 1 cut(s) 32
BstAFI CTTAAG 1 cut(s) 128
BstDEI CTNAG 1 cut(s) 39
BstNI CCWGG 1 cut(s) 32
BstSCI CCNGG 1 cut(s) 30
CsiI ACCWGGT 1 cut(s) 30
Csp6I GTAC 1 cut(s) 28
CviAII CATG 1 cut(s) 174
CviJI RGCY 2 cut(s) 127, 133
CviKI_1 RGCY 2 cut(s) 127, 133
CviQI GTAC 1 cut(s) 28
DdeI CTNAG 1 cut(s) 39
EcoRII CCWGG 1 cut(s) 30
FaeI CATG 1 cut(s) 177
FaiI YATR 5 cut(s) 23, 101, 123, 155, 175
FatI CATG 1 cut(s) 173
Hin1II CATG 1 cut(s) 177
HindIII AAGCTT 1 cut(s) 125
HinfI GANTC 1 cut(s) 146
Hpy188III TCNNGA 1 cut(s) 6
HpyAV CCTTC 1 cut(s) 58
HpyCH4V TGCA 1 cut(s) 14
HpyF3I CTNAG 1 cut(s) 39
Hsp92II CATG 1 cut(s) 177
LpnPI CCDG 7 cut(s) 17, 44, 56, 81, 92, 93, 175
MabI ACCWGGT 1 cut(s) 30
MfeI CAATTG 1 cut(s) 15
MluCI AATT 2 cut(s) 15, 112
MlyI GAGTC 1 cut(s) 140
MseI TTAA 2 cut(s) 129, 159
MspCI CTTAAG 1 cut(s) 128
MspR9I CCNGG 1 cut(s) 32
MunI CAATTG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 32
NlaIII CATG 1 cut(s) 177
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
Psp6I CCWGG 1 cut(s) 30
PspGI CCWGG 1 cut(s) 30
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
SaqAI TTAA 2 cut(s) 129, 159
SchI GAGTC 1 cut(s) 140
ScrFI CCNGG 1 cut(s) 32
SetI ASST 6 cut(s) 13, 33, 88, 129, 135, 165
SexAI ACCWGGT 1 cut(s) 30
SgeI CNNG 9 cut(s) 18, 43, 44, 83, 91, 95, 108, 120, 186
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 2 cut(s) 15, 112
StyD4I CCNGG 1 cut(s) 30
TasI AATT 2 cut(s) 15, 112
Tru1I TTAA 2 cut(s) 129, 159
Tru9I TTAA 2 cut(s) 129, 159
TspDTI ATGAA 1 cut(s) 46
Vha464I CTTAAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.