No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0164601 |
| rosa_laevigata | RLG00000016816 |
| rosa_multiflora | Rmu_sc0001557.1_g000008 Rmu_sc0002489.1_g000013 Rmu_sc0002532.1_g000028 Rmu_sc0003710.1_g000006 |
| rosa_roxburghii | Rroxscaffold_2G00087760 Rroxscaffold_4G00327750 Rroxscaffold_7G00160260 |
| rosa_samantha | Rh3AG292100 Rh3BG329400 Rh3CG326500 Rh3DG325400 Rh7AG458700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 170 |
| AcsI | RAATTY | 1 cut(s) | 6 |
| AluBI | AGCT | 2 cut(s) | 96, 140 |
| AluI | AGCT | 2 cut(s) | 96, 140 |
| ApeKI | GCWGC | 1 cut(s) | 140 |
| ApoI | RAATTY | 1 cut(s) | 6 |
| BbvI | GCAGC | 1 cut(s) | 127 |
| BclI | TGATCA | 1 cut(s) | 48 |
| BisI | GCNGC | 1 cut(s) | 141 |
| BlsI | GCNGC | 1 cut(s) | 142 |
| BpuEI | CTTGAG | 1 cut(s) | 106 |
| Bse1I | ACTGG | 3 cut(s) | 43, 164, 224 |
| BseMII | CTCAG | 2 cut(s) | 105, 135 |
| BseNI | ACTGG | 3 cut(s) | 43, 164, 224 |
| BseXI | GCAGC | 1 cut(s) | 127 |
| Bsp143I | GATC | 1 cut(s) | 48 |
| BspCNI | CTCAG | 2 cut(s) | 106, 136 |
| BsrI | ACTGG | 3 cut(s) | 43, 164, 224 |
| BssMI | GATC | 1 cut(s) | 48 |
| BstC8I | GCNNGC | 1 cut(s) | 98 |
| BstDEI | CTNAG | 2 cut(s) | 114, 144 |
| BstKTI | GATC | 1 cut(s) | 51 |
| BstMBI | GATC | 1 cut(s) | 48 |
| BstV1I | GCAGC | 1 cut(s) | 127 |
| BtsI | GCAGTG | 1 cut(s) | 199 |
| BtsIMutI | CAGTG | 2 cut(s) | 187, 199 |
| Cac8I | GCNNGC | 1 cut(s) | 98 |
| CviAII | CATG | 1 cut(s) | 259 |
| DdeI | CTNAG | 2 cut(s) | 114, 144 |
| DpnI | GATC | 1 cut(s) | 50 |
| DpnII | GATC | 1 cut(s) | 48 |
| FaeI | CATG | 1 cut(s) | 262 |
| FaiI | YATR | 4 cut(s) | 66, 75, 170, 260 |
| FatI | CATG | 1 cut(s) | 258 |
| FbaI | TGATCA | 1 cut(s) | 48 |
| Fnu4HI | GCNGC | 1 cut(s) | 141 |
| Fsp4HI | GCNGC | 1 cut(s) | 141 |
| GluI | GCNGC | 1 cut(s) | 141 |
| Hin1II | CATG | 1 cut(s) | 262 |
| Hpy166II | GTNNAC | 1 cut(s) | 157 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy8I | GTNNAC | 1 cut(s) | 157 |
| HpyF3I | CTNAG | 2 cut(s) | 114, 144 |
| Hsp92II | CATG | 1 cut(s) | 262 |
| Ksp22I | TGATCA | 1 cut(s) | 48 |
| Kzo9I | GATC | 1 cut(s) | 48 |
| LpnPI | CCDG | 4 cut(s) | 56, 82, 145, 205 |
| Lsp1109I | GCAGC | 1 cut(s) | 127 |
| MalI | GATC | 1 cut(s) | 50 |
| MboI | GATC | 1 cut(s) | 48 |
| MluCI | AATT | 2 cut(s) | 6, 251 |
| MseI | TTAA | 2 cut(s) | 27, 277 |
| NdeII | GATC | 1 cut(s) | 48 |
| NlaIII | CATG | 1 cut(s) | 262 |
| PkrI | GCNGC | 1 cut(s) | 142 |
| PsiI | TTATAA | 1 cut(s) | 170 |
| SaqAI | TTAA | 2 cut(s) | 27, 277 |
| SatI | GCNGC | 1 cut(s) | 141 |
| Sau3AI | GATC | 1 cut(s) | 48 |
| SetI | ASST | 2 cut(s) | 98, 142 |
| SgeI | CNNG | 9 cut(s) | 25, 46, 55, 97, 109, 172, 232, 236, 271 |
| SmlI | CTYRAG | 1 cut(s) | 85 |
| SmoI | CTYRAG | 1 cut(s) | 85 |
| Sse9I | AATT | 2 cut(s) | 6, 251 |
| TaqII | GACCGA | 1 cut(s) | 263 |
| TasI | AATT | 2 cut(s) | 6, 251 |
| Tru1I | TTAA | 2 cut(s) | 27, 277 |
| Tru9I | TTAA | 2 cut(s) | 27, 277 |
| TscAI | CASTG | 2 cut(s) | 187, 199 |
| TseI | GCWGC | 1 cut(s) | 140 |
| TspRI | CASTG | 2 cut(s) | 187, 199 |
| XapI | RAATTY | 1 cut(s) | 6 |