Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0013690

Physical Location & Seq

Genomic Coordinates Forward (+)

392254 .. 396594

Gene Structure 4341 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41534

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGAGCAAGCAAACGATGTGGTCGTTGCAGAGAACAAAGCCAAATATGGAGGTGGTGGCGGTAGCGTTAGCATAGCCGAGAGGAGGGCAGCCAAGTGTGGATTCAATGCGGAGAGGATCAATACGGCGCGTTTCAGGAGGACCAACACCAGCCCTCTGCCTTCGCCGGTGGAGAGGTCTCCTTGCCACCTCACTATTCCTCCCGGCATCAGTCCCACCGCTTTGCTCGACTCCCCCATGATGCTCCCCAATTCTCAGGCATTGCCATCTCCCACTACCGGAACTTTTCCATTGCTTCCTCCTAGTGATGACAGTTCAATGCTGAAATCTGCAACTAATGAAGATGTTCGTAGGGGGAGTGGTTTTGATTCATCCTTCATGTTGAAGAGTCAAGGAGATCCTAAGTATCTGCCAGGTTATTCTGGTTTTGAAAATCAGGGATCTAATGTTGACTATCAAGCTCTTGTCTTGGAGCAACAGCCAATGGATTTTGATTTCCCGATGGAATTTCCTGAAGAAGTGAATGCAAAACACTATGCTGTTGATCCATCTAATGATGTTAAGAATTTAAATAGTGTGGTAATGAATGAGAGCTGTGTTGACTTGCAAATGCCTCATTCCAGCTTAGCTTCTTTTCCCAAAGAAGTTATTCATGGGGAGGATGTTGGGACCCATCAACTTTTGGAAGGAGACCATAAAGGGTATCCATCTCTGGGAATGGCAAGGAATTCAGAGGATGGATACAATTGGAGGAAGTATGGGCAGAAACAGGTTAAAGGTAGTGAATATCCAAGGAGCTACTATAAGTGCACACATCCAAATTGTCAGGTGAAGAAAAAGGTGGAACGATCCTTTGATGGTCAAATAACAGAAATCATTTACAAGGGAGCTCCTCATAACCATGCACAACCTCAGCCTAATCGACGAGCTGCAGCATCACTTGGATCAGCATTTTCATTTGATGAGATGTCAGAGATGGGTGAGGGCAATAGAACCTCTGTCAAAGTTGACAGTGACTCACTTTGGGCAAAGATTCAGTCTGGTGAGGATATTAAGAGTGGTTATGATGGGAGGCTTGATGGTCTGGAAAGGACTTCCTCAGCATCCGTTGTTACTGATCTTTCTGATCCATTATCGGCTACCCAAGGAAAATCCCCGGGTATCTTTGAATCTGTAGACACTCCAGAGTTTTCATCCACACTTGCTAGTGTTGATGAAGATGACCAGGCCACCCTACGGAGCATATCGCTTGGAGAGGATGCAGATAATGAAGAATCTGACTCAAAAAGAAGAAAGAAAGATAGCTGCATGATTGAAACAAGTATAGCTTCCAGGGCTGTCCGTGAACCAAGAGTGGTTGTCCAAATTGAGAGTGAAATCGACATACTTGATGATGGCTACCGTTGGCGGAAGTATGGACAAAAAGTTGTCAAAGGAAATCCAAACCCCAGGAGCTACTACAAATGTACAAGTGCGGGATGCTTAGTAAGGAAGCATGTGGAAAGGGCCTCCCATGATCTGAAATTCGTAATTACTACATACGAGGGAAAACACAACCATGAAGTGCCTGCAGCCAGAAACAGTAATCATATAAACTCAAGCAGTGCAAATGGACATCCACCTACTCAGTCAGCACTGGCGTTATCCAGAAATACCAACATTCCAAAACCTGAGACACAAGTACAAGATCTTGCGCCTCATTTTGATAGAAAACCAGAATTTCATGACGAATACCTGCGACCTACTTATCTTGGGAATTTCAGCAATGACTTGAAATATGGAGCTACCTCCATCTACCAAATGAAGTTCCCACCTCTTCAGAATGCAATGCCATATGGCTCCTTTGGTCTAAATGCTCCTCATCACAATGTGGCTCACCAGGCTGGTTCTGTTGCATCTATTGTCCCAGACTTCTCCATGTCACTGCCCTTGAATCTTCCCCCATCTGGGAATCTTGGTCTCGCAGGTTTTGATTTCAATAATGGAAAGTCAGTATATCCAGTGCAGCCTTATGTCTCAGGACAGCAGCTCCAGGAGAATGACTTACGGTACCTGAAGCCAAAACAAGAGCAGAAGGATGATGGCCTTTATGATGCCTGCAGCCTGCCTATCATTGATCAGGGAAATGCATCATTGTCACCATCCTCATCCTTACTCTATCACAGAATGATGGGAAGCTATTCATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007163 GO:0007275 GO:0007389 GO:0008150 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009889 GO:0009942 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

729

Amino Acids

80.16

Weight (kDa)

5.81

Isoelectric Point (pI)

54.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	245 - 301	1.6e-24	WRKY DNA -binding domain
WRKY	PF03106	464 - 521	1.1e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g00500
malus_domestica	MD04G1244700.v1.1 MD12G1260600.v1.1
prunus_persica	Prupe.6G361300_v2.0.a1
pyrus_communis	pycom04g21550 pycom12g23860
rosa_chinensis	RchiOBHm_Chr3g0447881
rosa_laevigata	RLG00000025964
rosa_multiflora	Rmu_sc0005969.1_g000001 Rmu_sc0020869.1_g000002 Rmu_sc0033808.1_g000003
rosa_roxburghii	Rroxscaffold_6G00426080
rosa_rugosa	Rorug02G0606800
rosa_samantha	Rh3AG006000 Rh3BG005700 Rh3CG005900 Rh3DG006200
rosa_wichuraiana	Rw3G000460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1743, 1955
Acc65I	GGTACC	1 cut(s)	2049
AccB1I	GGYRCC	1 cut(s)	2049
AccI	GTMKAC	1 cut(s)	1176
AccII	CGCG	1 cut(s)	130
AciI	CCGC	5 cut(s)	60, 110, 219, 1408, 1475
AclWI	GGATC	7 cut(s)	125, 392, 448, 539, 843, 952, 1121
AcsI	RAATTY	6 cut(s)	506, 565, 727, 1523, 1718, 1756
AcuI	CTGAAG	3 cut(s)	534, 1802, 2075
AdeI	CACNNNGTG	1 cut(s)	1870
AfaI	GTAC	3 cut(s)	1468, 1683, 2051
AfiI	CCNNNNNNNGG	6 cut(s)	84, 278, 713, 1236, 1946, 1947
AgsI	TTSAA	9 cut(s)	106, 318, 385, 431, 1169, 1316, 1774, 1933, 1978
AjnI	CCWGG	6 cut(s)	412, 1224, 1331, 1448, 1878, 2031
AjuI	GAANNNNNNNTTGG	2 cut(s)	86, 118
Alw21I	GWGCWC	2 cut(s)	812, 892
Alw26I	GTCTC	5 cut(s)	183, 684, 1667, 1964, 2020
Alw44I	GTGCAC	1 cut(s)	808
AlwI	GGATC	7 cut(s)	125, 392, 448, 539, 843, 952, 1121
Ama87I	CYCGRG	1 cut(s)	1156
AoxI	GGCC	3 cut(s)	1227, 1506, 2083
ApaLI	GTGCAC	1 cut(s)	808
ApeKI	GCWGC	8 cut(s)	89, 929, 932, 1305, 1571, 2005, 2026, 2100
ApoI	RAATTY	6 cut(s)	506, 565, 727, 1523, 1718, 1756
ArsI	GACNNNNNNTTYG	2 cut(s)	1022, 1054
Asp700I	GAANNNNTTC	3 cut(s)	345, 648, 2179
Asp718I	GGTACC	1 cut(s)	2049
AspLEI	GCGC	2 cut(s)	130, 1696
AspS9I	GGNCC	3 cut(s)	141, 669, 1506
AsuC2I	CCSGG	3 cut(s)	204, 1157, 1158
AsuHPI	GGTGA	5 cut(s)	841, 992, 1055, 1868, 2130
AvaI	CYCGRG	1 cut(s)	1156
AvaII	GGWCC	2 cut(s)	141, 669
BaeGI	GKGCMC	1 cut(s)	812
BanI	GGYRCC	1 cut(s)	2049
BanII	GRGCYC	1 cut(s)	892
Bbv12I	GWGCWC	2 cut(s)	812, 892
BbvCI	CCTCAGC	2 cut(s)	912, 1099
BbvI	GCAGC	8 cut(s)	101, 916, 944, 1292, 1583, 2017, 2038, 2112
BceAI	ACGGC	1 cut(s)	141
BciT130I	CCWGG	6 cut(s)	414, 1226, 1333, 1450, 1880, 2033
BciVI	GTATCC	2 cut(s)	714, 734
BclI	TGATCA	1 cut(s)	2116
BcnI	CCSGG	3 cut(s)	204, 1157, 1158
BcoDI	GTCTC	5 cut(s)	183, 684, 1667, 1964, 2020
BfaI	CTAG	2 cut(s)	303, 1206
BfmI	CTRYAG	4 cut(s)	930, 1173, 1569, 2098
BfuAI	ACCTGC	2 cut(s)	1743, 1955
BfuI	GTATCC	2 cut(s)	714, 734
BglII	AGATCT	1 cut(s)	1687
BisI	GCNGC	8 cut(s)	90, 930, 933, 1306, 1572, 2006, 2027, 2101
BlpI	GCTNAGC	1 cut(s)	625
BlsI	GCNGC	8 cut(s)	91, 931, 934, 1307, 1573, 2007, 2028, 2102
Bme1390I	CCNGG	9 cut(s)	204, 414, 1157, 1158, 1226, 1333, 1450, 1880, 2033
Bme18I	GGWCC	2 cut(s)	141, 669
BmeT110I	CYCGRG	1 cut(s)	1156
BmgT120I	GGNCC	3 cut(s)	141, 669, 1506
BmiI	GGNNCC	4 cut(s)	670, 671, 1840, 2051
BmrFI	CCNGG	9 cut(s)	204, 414, 1157, 1158, 1226, 1333, 1450, 1880, 2033
BmsI	GCATC	9 cut(s)	216, 231, 944, 1112, 1249, 1469, 1904, 2083, 2138
BpmI	CTGGAG	2 cut(s)	1167, 2015
Bpu10I	CCTNAGC	2 cut(s)	912, 1099
Bpu1102I	GCTNAGC	1 cut(s)	625
BpuEI	CTTGAG	1 cut(s)	1582
BpuMI	CCSGG	3 cut(s)	204, 1157, 1158
BsaI	GGTCTC	3 cut(s)	183, 684, 1964
BsaJI	CCNNGG	6 cut(s)	791, 1144, 1155, 1156, 1332, 1448
BsaWI	WCCGGW	1 cut(s)	278
BsaXI	ACNNNNNCTCC	4 cut(s)	184, 214, 2013, 2043
Bsc4I	CCNNNNNNNGG	6 cut(s)	84, 278, 713, 1236, 1946, 1947
Bse118I	RCCGGY	1 cut(s)	166
Bse1I	ACTGG	2 cut(s)	1641, 2000
Bse3DI	GCAATG	4 cut(s)	260, 290, 1771, 1833
BseBI	CCWGG	6 cut(s)	414, 1226, 1333, 1450, 1880, 2033
BseDI	CCNNGG	6 cut(s)	791, 1144, 1155, 1156, 1332, 1448
BseLI	CCNNNNNNNGG	6 cut(s)	84, 278, 713, 1236, 1946, 1947
BseMI	GCAATG	4 cut(s)	260, 290, 1771, 1833
BseMII	CTCAG	6 cut(s)	269, 926, 1113, 1640, 1662, 2031
BseNI	ACTGG	2 cut(s)	1641, 2000
BseRI	GAGGAG	3 cut(s)	97, 882, 1848
BseSI	GKGCMC	1 cut(s)	812
BseXI	GCAGC	8 cut(s)	101, 916, 944, 1292, 1583, 2017, 2038, 2112
BsgI	GTGCAG	1 cut(s)	2024
Bsh1236I	CGCG	1 cut(s)	130
BshFI	GGCC	3 cut(s)	1229, 1508, 2085
BshNI	GGYRCC	1 cut(s)	2049
BsiHKAI	GWGCWC	2 cut(s)	812, 892
BsiHKCI	CYCGRG	1 cut(s)	1156
BsiSI	CCGG	4 cut(s)	167, 204, 279, 1157
BslFI	GGGAC	3 cut(s)	198, 682, 1889
BslI	CCNNNNNNNGG	6 cut(s)	84, 278, 713, 1236, 1946, 1947
BsmAI	GTCTC	5 cut(s)	183, 684, 1667, 1964, 2020
BsmFI	GGGAC	3 cut(s)	198, 682, 1889
BsmI	GAATGC	2 cut(s)	529, 1828
BsnI	GGCC	3 cut(s)	1229, 1508, 2085
Bso31I	GGTCTC	3 cut(s)	183, 684, 1964
BsoBI	CYCGRG	1 cut(s)	1156
Bsp1286I	GDGCHC	2 cut(s)	812, 892
Bsp1407I	TGTACA	1 cut(s)	1466
Bsp1720I	GCTNAGC	1 cut(s)	625
BspACI	CCGC	5 cut(s)	60, 110, 219, 1408, 1475
BspANI	GGCC	3 cut(s)	1229, 1508, 2085
BspCNI	CTCAG	6 cut(s)	268, 925, 1112, 1639, 1663, 2030
BspFNI	CGCG	1 cut(s)	130
BspHI	TCATGA	1 cut(s)	1723
BspLI	GGNNCC	4 cut(s)	670, 671, 1840, 2051
BspMAI	CTGCAG	3 cut(s)	934, 1573, 2102
BspMI	ACCTGC	2 cut(s)	1743, 1955
BspPI	GGATC	7 cut(s)	125, 392, 448, 539, 843, 952, 1121
BspT107I	GGYRCC	1 cut(s)	2049
BspTNI	GGTCTC	3 cut(s)	183, 684, 1964
BsrDI	GCAATG	4 cut(s)	260, 290, 1771, 1833
BsrFI	RCCGGY	1 cut(s)	166
BsrGI	TGTACA	1 cut(s)	1466
BsrI	ACTGG	2 cut(s)	1641, 2000
BssAI	RCCGGY	1 cut(s)	166
BssECI	CCNNGG	6 cut(s)	791, 1144, 1155, 1156, 1332, 1448
BssT1I	CCWWGG	2 cut(s)	791, 1144
Bst2UI	CCWGG	6 cut(s)	414, 1226, 1333, 1450, 1880, 2033
Bst4CI	ACNGT	5 cut(s)	314, 1013, 1403, 1583, 2049
Bst6I	CTCTTC	2 cut(s)	380, 1821
BstAUI	TGTACA	1 cut(s)	1466
BstC8I	GCNNGC	4 cut(s)	9, 1569, 2098, 2105
BstDEI	CTNAG	9 cut(s)	255, 402, 625, 912, 1099, 1483, 1626, 1671, 2017
BstFNI	CGCG	1 cut(s)	130
BstHHI	GCGC	2 cut(s)	130, 1696
BstMAI	GTCTC	5 cut(s)	183, 684, 1667, 1964, 2020
BstMWI	GCNNNNNNNGC	2 cut(s)	1334, 1880
BstNI	CCWGG	6 cut(s)	414, 1226, 1333, 1450, 1880, 2033
BstNSI	RCATGY	1 cut(s)	1499
BstSCI	CCNGG	9 cut(s)	202, 412, 1155, 1156, 1224, 1331, 1448, 1878, 2031
BstSFI	CTRYAG	4 cut(s)	930, 1173, 1569, 2098
BstSLI	GKGCMC	1 cut(s)	812
BstUI	CGCG	1 cut(s)	130
BstV1I	GCAGC	8 cut(s)	101, 916, 944, 1292, 1583, 2017, 2038, 2112
BstX2I	RGATCY	3 cut(s)	397, 440, 1687
BstYI	RGATCY	3 cut(s)	397, 440, 1687
BsuI	GTATCC	2 cut(s)	714, 734
BsuRI	GGCC	3 cut(s)	1229, 1508, 2085
BtsI	GCAGTG	2 cut(s)	1609, 1922
BtsIMutI	CAGTG	5 cut(s)	1018, 1609, 1634, 1922, 2007
BveI	ACCTGC	2 cut(s)	1743, 1955
Cac8I	GCNNGC	4 cut(s)	9, 1569, 2098, 2105
CciI	TCATGA	1 cut(s)	1723
CfoI	GCGC	2 cut(s)	130, 1696
Cfr10I	RCCGGY	1 cut(s)	166
Cfr13I	GGNCC	3 cut(s)	141, 669, 1506
Cfr9I	CCCGGG	1 cut(s)	1156
Csp6I	GTAC	3 cut(s)	1467, 1682, 2050
CspCI	CAANNNNNGTGG	1 cut(s)	35
CviQI	GTAC	3 cut(s)	1467, 1682, 2050
DdeI	CTNAG	9 cut(s)	255, 402, 625, 912, 1099, 1483, 1626, 1671, 2017
DraI	TTTAAA	1 cut(s)	570
DraIII	CACNNNGTG	1 cut(s)	1870
Eam1104I	CTCTTC	2 cut(s)	380, 1821
EarI	CTCTTC	2 cut(s)	380, 1821
EciI	GGCGGA	1 cut(s)	1423
Ecl136II	GAGCTC	1 cut(s)	890
Eco130I	CCWWGG	2 cut(s)	791, 1144
Eco24I	GRGCYC	1 cut(s)	892
Eco31I	GGTCTC	3 cut(s)	183, 684, 1964
Eco47I	GGWCC	2 cut(s)	141, 669
Eco53kI	GAGCTC	1 cut(s)	890
Eco57I	CTGAAG	3 cut(s)	534, 1802, 2075
Eco88I	CYCGRG	1 cut(s)	1156
EcoICRI	GAGCTC	1 cut(s)	890
EcoO109I	RGGNCCY	2 cut(s)	669, 1506
EcoRI	GAATTC	1 cut(s)	727
EcoRII	CCWGG	6 cut(s)	412, 1224, 1331, 1448, 1878, 2031
EcoT14I	CCWWGG	2 cut(s)	791, 1144
EcoT22I	ATGCAT	1 cut(s)	2131
EcoT38I	GRGCYC	1 cut(s)	892
ErhI	CCWWGG	2 cut(s)	791, 1144
FalI	AAGNNNNNCTT	2 cut(s)	1312, 1344
FaqI	GGGAC	3 cut(s)	198, 682, 1889
FauI	CCCGC	1 cut(s)	1468
FauNDI	CATATG	1 cut(s)	1834
FbaI	TGATCA	1 cut(s)	2116
FblI	GTMKAC	1 cut(s)	1176
Fnu4HI	GCNGC	8 cut(s)	90, 930, 933, 1306, 1572, 2006, 2027, 2101
FriOI	GRGCYC	1 cut(s)	892
Fsp4HI	GCNGC	8 cut(s)	90, 930, 933, 1306, 1572, 2006, 2027, 2101
FspBI	CTAG	2 cut(s)	303, 1206
GlaI	GCGC	2 cut(s)	129, 1695
GluI	GCNGC	8 cut(s)	90, 930, 933, 1306, 1572, 2006, 2027, 2101
GsuI	CTGGAG	2 cut(s)	1167, 2015
HaeIII	GGCC	3 cut(s)	1229, 1508, 2085
HapII	CCGG	4 cut(s)	167, 204, 279, 1157
HhaI	GCGC	2 cut(s)	130, 1696
Hin6I	GCGC	2 cut(s)	128, 1694
HinP1I	GCGC	2 cut(s)	128, 1694
HincII	GTYRAC	3 cut(s)	451, 601, 1009
HindII	GTYRAC	3 cut(s)	451, 601, 1009
HpaII	CCGG	4 cut(s)	167, 204, 279, 1157
HphI	GGTGA	5 cut(s)	841, 992, 1055, 1868, 2130
Hpy166II	GTNNAC	6 cut(s)	451, 601, 810, 1009, 1177, 1346
Hpy188I	TCNGA	6 cut(s)	733, 973, 1126, 1279, 1521, 1821
Hpy188III	TCNNGA	8 cut(s)	136, 499, 512, 1085, 1184, 1647, 1724, 2019
Hpy8I	GTNNAC	6 cut(s)	451, 601, 810, 1009, 1177, 1346
Hpy99I	CGWCG	1 cut(s)	927
HpyAV	CCTTC	4 cut(s)	171, 385, 680, 2068
HpyCH4III	ACNGT	5 cut(s)	314, 1013, 1403, 1583, 2049
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1334, 1880
HpyF3I	CTNAG	9 cut(s)	255, 402, 625, 912, 1099, 1483, 1626, 1671, 2017
HspAI	GCGC	2 cut(s)	128, 1694
KflI	GGGWCCC	1 cut(s)	669
KpnI	GGTACC	1 cut(s)	2053
Ksp22I	TGATCA	1 cut(s)	2116
Lsp1109I	GCAGC	8 cut(s)	101, 916, 944, 1292, 1583, 2017, 2038, 2112
LweI	GCATC	9 cut(s)	216, 231, 944, 1112, 1249, 1469, 1904, 2083, 2138
MaeI	CTAG	2 cut(s)	303, 1206
MaeIII	GTNAC	4 cut(s)	1013, 1111, 1920, 2136
MboII	GAAGA	9 cut(s)	353, 397, 527, 844, 1229, 1283, 1302, 1808, 1928
MfeI	CAATTG	1 cut(s)	745
MflI	RGATCY	3 cut(s)	397, 440, 1687
MhlI	GDGCHC	2 cut(s)	812, 892
MlyI	GAGTC	4 cut(s)	224, 397, 1010, 1274
Mph1103I	ATGCAT	1 cut(s)	2131
MroXI	GAANNNNTTC	3 cut(s)	345, 648, 2179
MseI	TTAA	4 cut(s)	561, 569, 774, 1053
MslI	CAYNNNNRTG	3 cut(s)	900, 1557, 1866
MspI	CCGG	4 cut(s)	167, 204, 279, 1157
MspR9I	CCNGG	9 cut(s)	204, 414, 1157, 1158, 1226, 1333, 1450, 1880, 2033
MunI	CAATTG	1 cut(s)	745
Mva1269I	GAATGC	2 cut(s)	529, 1828
MvaI	CCWGG	6 cut(s)	414, 1226, 1333, 1450, 1880, 2033
MvnI	CGCG	1 cut(s)	130
MwoI	GCNNNNNNNGC	2 cut(s)	1334, 1880
NciI	CCSGG	3 cut(s)	204, 1157, 1158
NdeI	CATATG	1 cut(s)	1834
NlaIV	GGNNCC	4 cut(s)	670, 671, 1840, 2051
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	3 cut(s)	1013, 1920, 2136
NsiI	ATGCAT	1 cut(s)	2131
NspI	RCATGY	1 cut(s)	1499
PagI	TCATGA	1 cut(s)	1723
PcsI	WCGNNNNNNNCGW	1 cut(s)	21
PctI	GAATGC	2 cut(s)	529, 1828
PdmI	GAANNNNTTC	3 cut(s)	345, 648, 2179
PfeI	GAWTC	7 cut(s)	102, 368, 1033, 1169, 1274, 1933, 1951
PfoI	TCCNGGA	1 cut(s)	2031
PkrI	GCNGC	8 cut(s)	91, 931, 934, 1307, 1573, 2007, 2028, 2102
PleI	GAGTC	4 cut(s)	224, 396, 1010, 1274
PpsI	GAGTC	4 cut(s)	224, 396, 1010, 1274
PpuMI	RGGWCCY	1 cut(s)	669
Psp124BI	GAGCTC	1 cut(s)	892
Psp5II	RGGWCCY	1 cut(s)	669
Psp6I	CCWGG	6 cut(s)	412, 1224, 1331, 1448, 1878, 2031
PspGI	CCWGG	6 cut(s)	412, 1224, 1331, 1448, 1878, 2031
PspN4I	GGNNCC	4 cut(s)	670, 671, 1840, 2051
PspPI	GGNCC	3 cut(s)	141, 669, 1506
PspPPI	RGGWCCY	1 cut(s)	669
PstI	CTGCAG	3 cut(s)	934, 1573, 2102
PsuI	RGATCY	3 cut(s)	397, 440, 1687
RsaI	GTAC	3 cut(s)	1468, 1683, 2051
RsaNI	GTAC	3 cut(s)	1467, 1682, 2050
RseI	CAYNNNNRTG	3 cut(s)	900, 1557, 1866
SacI	GAGCTC	1 cut(s)	892
SaqAI	TTAA	4 cut(s)	561, 569, 774, 1053
SatI	GCNGC	8 cut(s)	90, 930, 933, 1306, 1572, 2006, 2027, 2101
Sau96I	GGNCC	3 cut(s)	141, 669, 1506
SchI	GAGTC	4 cut(s)	224, 397, 1010, 1274
ScrFI	CCNGG	9 cut(s)	204, 414, 1157, 1158, 1226, 1333, 1450, 1880, 2033
SduI	GDGCHC	2 cut(s)	812, 892
SfaNI	GCATC	9 cut(s)	216, 231, 944, 1112, 1249, 1469, 1904, 2083, 2138
SfcI	CTRYAG	4 cut(s)	930, 1173, 1569, 2098
SgrAI	CRCCGGYG	1 cut(s)	166
SinI	GGWCC	2 cut(s)	141, 669
SmaI	CCCGGG	1 cut(s)	1158
SmiI	ATTTAAAT	1 cut(s)	570
SmiMI	CAYNNNNRTG	3 cut(s)	900, 1557, 1866
SmlI	CTYRAG	1 cut(s)	1597
SmoI	CTYRAG	1 cut(s)	1597
SsiI	CCGC	5 cut(s)	60, 110, 219, 1408, 1475
SspMI	CTAG	2 cut(s)	303, 1206
SstI	GAGCTC	1 cut(s)	892
StyD4I	CCNGG	9 cut(s)	202, 412, 1155, 1156, 1224, 1331, 1448, 1878, 2031
StyI	CCWWGG	2 cut(s)	791, 1144
SwaI	ATTTAAAT	1 cut(s)	570
TaaI	ACNGT	5 cut(s)	314, 1013, 1403, 1583, 2049
TaqI	TCGA	3 cut(s)	228, 922, 1380
TatI	WGTACW	2 cut(s)	1466, 1681
TfiI	GAWTC	7 cut(s)	102, 368, 1033, 1169, 1274, 1933, 1951
Tru1I	TTAA	4 cut(s)	561, 569, 774, 1053
Tru9I	TTAA	4 cut(s)	561, 569, 774, 1053
TscAI	CASTG	5 cut(s)	1018, 1609, 1641, 1929, 2007
TseFI	GTSAC	3 cut(s)	1013, 1920, 2136
TseI	GCWGC	8 cut(s)	89, 929, 932, 1305, 1571, 2005, 2026, 2100
Tsp45I	GTSAC	3 cut(s)	1013, 1920, 2136
TspGWI	ACGGA	3 cut(s)	1096, 1252, 1331
TspMI	CCCGGG	1 cut(s)	1156
TspRI	CASTG	5 cut(s)	1018, 1609, 1641, 1929, 2007
VneI	GTGCAC	1 cut(s)	808
VpaK11BI	GGWCC	2 cut(s)	141, 669
XapI	RAATTY	6 cut(s)	506, 565, 727, 1523, 1718, 1756
XceI	RCATGY	1 cut(s)	1499
XmaI	CCCGGG	1 cut(s)	1156
XmiI	GTMKAC	1 cut(s)	1176
XmnI	GAANNNNTTC	3 cut(s)	345, 648, 2179
XspI	CTAG	2 cut(s)	303, 1206
Zsp2I	ATGCAT	1 cut(s)	2131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.