Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0013690

Physical Location & Seq

Genomic Coordinates Reverse (-)

49510555 .. 49515325

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025964

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGGATTTTTAAGGACAATGGAGCAAGCAAACGATGTGGTCGTTGCAGAGAACAAAGCCAAATATGGAGGTGGTGGCGGTGGCGGTAGCGTTAGCATAGCCGAGAGGAGGGCAGCCAAGTGTGGATTCAATGCGGAGAGGATCAATACGGCGCATTTCAGGAGGACCACCACCAGCCCTCTGCCTTCGCCGGTGGAGAGGTCTCCTTGCCACCTCACTATTCCTCCCGGCATCAGTCCCACCGCTTTGCTCGACTCCCCCATGATGCTCCCCAATTCTCAGGCATTGCCATCTCCCACTACCGGAACTTTTCCATTGCTTCCTCCTAGTGATGACAGTTCAATGCTGAAATCTGCAACTAATGAAGATGTTTGTAGGGGGAGTGGTTTTGATTCATCCTTCATGTTGAAGAGTGAAGGAGATCCTAAGTATCTGCCAGGTTATTCTGGTTTTGAAAATCAGGGATCTAATGTTGACTATCAAGCTCTTGTTTTGGAGCAACAGCCAATGGATTTTGATTTCCCGATGGAGGAATTTCCTGAAGAAGTGAATGCAAAGCACTATGCTGTTGATCCATCTAATGATGTTAAGAATTTAAATAGTGTGGTAATGAATGAGAGCTGTGTTGACTTGCAAATGCATCATTCCAGCTTAGCTTCTTTTCCCAAAGAAGTTATCCATGGGGAGGATGTTGGGACGCATCAACTTTTGGAAGGAGACCATAAAGGGTATCCATCTCTGGGAATGGCAAGGAATTCGGAGGATGGATACAATTGGAGGAAGTATGGGCAGAAACAGGTTAAAGGTAGTGAATATCCAAGGAGCTACTATAAGTGCACACATCCAAATTGTCAGGTGAAGAAAAAGGTGGAACGATCCTTTGACGGTCAAATAACAGAAATCATTTACAAGGGAGCTCCTCATAACCATGCACAACCTCAGCCTAATCGACGAGCTGCAGCATCACTTGGATCAGCATTTTCATTTGATGAGATGTCAGAGATGGGTGAGGGCAATAGAACCTCTTTCAAAGTTGACGGTGACTCACTATGGGCAAAGATTCAGTCTGGTGAGGATATTAAGAGTGGTTATGATGGGAGGCCTGATGGTCTGGAAAGGACTTCCTCAGCATCCGTTGTTACTGATCTTTCTGATCCATTATCGGCTACCCAAGGAAAATCCCCGGGTATCTTTGAATCTGCAGACACTCCGGAGTTTTCATCCACACTTGCTAGTGTTGATGAAGATGACCAGGCCACCCTACGGAGCATATCACTTGGAGAGGATGCAGATAATGAAGAATCTGACTCAAAAAGAAGAAAGAAAGATAGCTGCATGATTGAAACAAGTATAGCTTCCAGGGCTGTCCGTGAACCAAGAGTGGTTGTCCAAATTGAGAGTGAAATCGACATACTTGATGATGGCTACCGTTGGCGGAAGTATGGACAAAAAGTTGTCAAAGGAAATCCAAACCCCAGGAGCTACTACAAATGTACAAGTGCGGGATGCTTAGTAAGGAAGCATGTGGAAAGGGCCTCCCATGATCTGAAATTCGTAATTACTACATACGAGGGAAAACACAACCATGAAGTGCCTGCAGCCAGAAACAGTAATCATATAAACTCAAGCAGTGCAAATGGACATCCACCTGCTCAGGCAGCACTGGCGTTATCCAGAAATACCAACATTCCAAAACCTGAGACACAGGTACAAGATCTTGCGCCTCATTTTGATAGAAAACCAGAATTTCATGGCGAATACCTGCGACCTACTTATCTTGGGAATTTCAACAATGACTTGAAGTATGGAGCTTCCTCCATCTACCAAATGAAGTTCCCACCTCTTCAGAATGCAATGTCGTATGGCTCCTTTGGTCTAAATGCTCCTCATCACAATGTGGCTCACCGGGCTGGTTCTGTTGCATCTGTTGTCCCAGACTTCTCCATGTCACTGCCCTTGAATCTTCCCCCATCAGGGAATCTTGGTCTTGCAGGTTTTGATTTCAATAATGGAAAGTCAGTTTATCCAGTGCAGCCTTATGTCTCAGGACAGCAGCTCCAGGAGAATGACTTGAGGTACCTGAAGCCAAAACAAGAGCAGAAGGATGATGGCCTTTATGATGCCTGCAGCCTGCCTATCATTGATCAGGGAAATGCATCATTGTCACCATCCTCATCCTTACTCTATCACAGAATGATGGGAAGCTATTCATCATATTCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000578 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007163 GO:0007275 GO:0007389 GO:0008150 GO:0009555 GO:0009790 GO:0009791 GO:0009793 GO:0009798 GO:0009880 GO:0009889 GO:0009942 GO:0009987 GO:0010154 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030010 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048229 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

WRKY

Protein Analysis

742

Amino Acids

81.29

Weight (kDa)

5.83

Isoelectric Point (pI)

54.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	254 - 310	1.7e-24	WRKY DNA -binding domain
WRKY	PF03106	473 - 530	1.1e-25	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013690)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g00500
malus_domestica	MD04G1244700.v1.1 MD12G1260600.v1.1
prunus_persica	Prupe.6G361300_v2.0.a1
pyrus_communis	pycom04g21550 pycom12g23860
rosa_chinensis	RchiOBHm_Chr3g0447881
rosa_laevigata	RLG00000025964
rosa_multiflora	Rmu_sc0005969.1_g000001 Rmu_sc0020869.1_g000002 Rmu_sc0033808.1_g000003
rosa_roxburghii	Rroxscaffold_6G00426080
rosa_rugosa	Rorug02G0606800
rosa_samantha	Rh3AG006000 Rh3BG005700 Rh3CG005900 Rh3DG006200
rosa_wichuraiana	Rw3G000460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1657
Acc36I	ACCTGC	3 cut(s)	1657, 1770, 1982
Acc65I	GGTACC	1 cut(s)	2076
AccB1I	GGYRCC	1 cut(s)	2076
AccIII	TCCGGA	1 cut(s)	1210
AciI	CCGC	6 cut(s)	78, 84, 134, 243, 1435, 1502
AclWI	GGATC	7 cut(s)	149, 416, 472, 566, 870, 979, 1148
AcsI	RAATTY	6 cut(s)	533, 592, 754, 1550, 1745, 1783
AcuI	CTGAAG	3 cut(s)	561, 1829, 2102
AdeI	CACNNNGTG	1 cut(s)	1897
AfaI	GTAC	3 cut(s)	1495, 1710, 2078
AfiI	CCNNNNNNNGG	8 cut(s)	108, 302, 529, 685, 740, 1263, 1973, 1974
AjnI	CCWGG	5 cut(s)	436, 1251, 1358, 1475, 2058
AjuI	GAANNNNNNNTTGG	2 cut(s)	110, 142
Alw21I	GWGCWC	2 cut(s)	839, 919
Alw26I	GTCTC	4 cut(s)	207, 711, 1694, 2047
Alw44I	GTGCAC	1 cut(s)	835
AlwI	GGATC	7 cut(s)	149, 416, 472, 566, 870, 979, 1148
Ama87I	CYCGRG	1 cut(s)	1183
Aor13HI	TCCGGA	1 cut(s)	1210
AoxI	GGCC	4 cut(s)	1100, 1254, 1533, 2110
ApaLI	GTGCAC	1 cut(s)	835
ApeKI	GCWGC	9 cut(s)	113, 956, 959, 1332, 1598, 1658, 2032, 2053, 2127
ApoI	RAATTY	6 cut(s)	533, 592, 754, 1550, 1745, 1783
ArsI	GACNNNNNNTTYG	2 cut(s)	1049, 1081
Asp700I	GAANNNNTTC	1 cut(s)	2206
Asp718I	GGTACC	1 cut(s)	2076
AspLEI	GCGC	2 cut(s)	154, 1723
AspS9I	GGNCC	2 cut(s)	165, 1533
AsuC2I	CCSGG	4 cut(s)	228, 1184, 1185, 1907
AsuHPI	GGTGA	6 cut(s)	868, 1019, 1052, 1082, 1895, 2157
AvaI	CYCGRG	1 cut(s)	1183
AvaII	GGWCC	1 cut(s)	165
BaeGI	GKGCMC	1 cut(s)	839
BanI	GGYRCC	1 cut(s)	2076
BanII	GRGCYC	1 cut(s)	919
Bbv12I	GWGCWC	2 cut(s)	839, 919
BbvCI	CCTCAGC	2 cut(s)	939, 1126
BbvI	GCAGC	9 cut(s)	125, 943, 971, 1319, 1610, 1670, 2044, 2065, 2139
BceAI	ACGGC	1 cut(s)	165
BcgI	CGANNNNNNTGC	2 cut(s)	738, 772
BciT130I	CCWGG	5 cut(s)	438, 1253, 1360, 1477, 2060
BciVI	GTATCC	2 cut(s)	741, 761
BclI	TGATCA	1 cut(s)	2143
BcnI	CCSGG	4 cut(s)	228, 1184, 1185, 1907
BcoDI	GTCTC	4 cut(s)	207, 711, 1694, 2047
BfaI	CTAG	2 cut(s)	327, 1233
BfmI	CTRYAG	4 cut(s)	957, 1200, 1596, 2125
BfuAI	ACCTGC	3 cut(s)	1657, 1770, 1982
BfuI	GTATCC	2 cut(s)	741, 761
BglII	AGATCT	1 cut(s)	1714
BisI	GCNGC	9 cut(s)	114, 957, 960, 1333, 1599, 1659, 2033, 2054, 2128
BlpI	GCTNAGC	1 cut(s)	652
BlsI	GCNGC	9 cut(s)	115, 958, 961, 1334, 1600, 1660, 2034, 2055, 2129
Bme1390I	CCNGG	9 cut(s)	228, 438, 1184, 1185, 1253, 1360, 1477, 1907, 2060
Bme18I	GGWCC	1 cut(s)	165
BmeT110I	CYCGRG	1 cut(s)	1183
BmgT120I	GGNCC	2 cut(s)	165, 1533
BmiI	GGNNCC	2 cut(s)	1867, 2078
BmrFI	CCNGG	9 cut(s)	228, 438, 1184, 1185, 1253, 1360, 1477, 1907, 2060
BpmI	CTGGAG	1 cut(s)	2042
Bpu10I	CCTNAGC	3 cut(s)	939, 1126, 1653
Bpu1102I	GCTNAGC	1 cut(s)	652
BpuEI	CTTGAG	2 cut(s)	1609, 2092
BpuMI	CCSGG	4 cut(s)	228, 1184, 1185, 1907
BsaI	GGTCTC	2 cut(s)	207, 711
BsaJI	CCNNGG	7 cut(s)	679, 818, 1171, 1182, 1183, 1359, 1475
BsaWI	WCCGGW	2 cut(s)	302, 1210
BsaXI	ACNNNNNCTCC	4 cut(s)	208, 238, 2040, 2070
Bsc4I	CCNNNNNNNGG	8 cut(s)	108, 302, 529, 685, 740, 1263, 1973, 1974
Bse118I	RCCGGY	1 cut(s)	190
Bse1I	ACTGG	2 cut(s)	1668, 2027
Bse3DI	GCAATG	3 cut(s)	284, 314, 1860
BseAI	TCCGGA	1 cut(s)	1210
BseBI	CCWGG	5 cut(s)	438, 1253, 1360, 1477, 2060
BseDI	CCNNGG	7 cut(s)	679, 818, 1171, 1182, 1183, 1359, 1475
BseLI	CCNNNNNNNGG	8 cut(s)	108, 302, 529, 685, 740, 1263, 1973, 1974
BseMI	GCAATG	3 cut(s)	284, 314, 1860
BseMII	CTCAG	6 cut(s)	293, 953, 1140, 1667, 1689, 2058
BseNI	ACTGG	2 cut(s)	1668, 2027
BseRI	GAGGAG	3 cut(s)	121, 909, 1875
BseSI	GKGCMC	1 cut(s)	839
BseXI	GCAGC	9 cut(s)	125, 943, 971, 1319, 1610, 1670, 2044, 2065, 2139
BsgI	GTGCAG	1 cut(s)	2051
BshFI	GGCC	4 cut(s)	1102, 1256, 1535, 2112
BshNI	GGYRCC	1 cut(s)	2076
BsiHKAI	GWGCWC	2 cut(s)	839, 919
BsiHKCI	CYCGRG	1 cut(s)	1183
BsiSI	CCGG	6 cut(s)	191, 228, 303, 1184, 1211, 1906
BslFI	GGGAC	3 cut(s)	222, 709, 1916
BslI	CCNNNNNNNGG	8 cut(s)	108, 302, 529, 685, 740, 1263, 1973, 1974
BsmAI	GTCTC	4 cut(s)	207, 711, 1694, 2047
BsmFI	GGGAC	3 cut(s)	222, 709, 1916
BsmI	GAATGC	2 cut(s)	556, 1855
BsnI	GGCC	4 cut(s)	1102, 1256, 1535, 2112
Bso31I	GGTCTC	2 cut(s)	207, 711
BsoBI	CYCGRG	1 cut(s)	1183
Bsp1286I	GDGCHC	2 cut(s)	839, 919
Bsp13I	TCCGGA	1 cut(s)	1210
Bsp1407I	TGTACA	1 cut(s)	1493
Bsp1720I	GCTNAGC	1 cut(s)	652
Bsp19I	CCATGG	1 cut(s)	679
BspACI	CCGC	6 cut(s)	78, 84, 134, 243, 1435, 1502
BspANI	GGCC	4 cut(s)	1102, 1256, 1535, 2112
BspCNI	CTCAG	6 cut(s)	292, 952, 1139, 1666, 1690, 2057
BspEI	TCCGGA	1 cut(s)	1210
BspLI	GGNNCC	2 cut(s)	1867, 2078
BspMAI	CTGCAG	4 cut(s)	961, 1204, 1600, 2129
BspMI	ACCTGC	3 cut(s)	1657, 1770, 1982
BspPI	GGATC	7 cut(s)	149, 416, 472, 566, 870, 979, 1148
BspT107I	GGYRCC	1 cut(s)	2076
BspTNI	GGTCTC	2 cut(s)	207, 711
BsrDI	GCAATG	3 cut(s)	284, 314, 1860
BsrFI	RCCGGY	1 cut(s)	190
BsrGI	TGTACA	1 cut(s)	1493
BsrI	ACTGG	2 cut(s)	1668, 2027
BssAI	RCCGGY	1 cut(s)	190
BssECI	CCNNGG	7 cut(s)	679, 818, 1171, 1182, 1183, 1359, 1475
BssT1I	CCWWGG	3 cut(s)	679, 818, 1171
Bst2UI	CCWGG	5 cut(s)	438, 1253, 1360, 1477, 2060
Bst4CI	ACNGT	5 cut(s)	338, 887, 1040, 1430, 1610
Bst6I	CTCTTC	2 cut(s)	404, 1848
BstAUI	TGTACA	1 cut(s)	1493
BstC8I	GCNNGC	4 cut(s)	27, 1596, 2125, 2132
BstDEI	CTNAG	9 cut(s)	279, 426, 652, 939, 1126, 1510, 1653, 1698, 2044
BstDSI	CCRYGG	1 cut(s)	679
BstHHI	GCGC	2 cut(s)	154, 1723
BstMAI	GTCTC	4 cut(s)	207, 711, 1694, 2047
BstMWI	GCNNNNNNNGC	4 cut(s)	1361, 1658, 1664, 1907
BstNI	CCWGG	5 cut(s)	438, 1253, 1360, 1477, 2060
BstNSI	RCATGY	1 cut(s)	1526
BstSCI	CCNGG	9 cut(s)	226, 436, 1182, 1183, 1251, 1358, 1475, 1905, 2058
BstSFI	CTRYAG	4 cut(s)	957, 1200, 1596, 2125
BstSLI	GKGCMC	1 cut(s)	839
BstV1I	GCAGC	9 cut(s)	125, 943, 971, 1319, 1610, 1670, 2044, 2065, 2139
BstX2I	RGATCY	3 cut(s)	421, 464, 1714
BstYI	RGATCY	3 cut(s)	421, 464, 1714
BsuI	GTATCC	2 cut(s)	741, 761
BsuRI	GGCC	4 cut(s)	1102, 1256, 1535, 2112
BtgI	CCRYGG	1 cut(s)	679
BtsI	GCAGTG	2 cut(s)	1636, 1949
BtsIMutI	CAGTG	4 cut(s)	1636, 1661, 1949, 2034
BveI	ACCTGC	3 cut(s)	1657, 1770, 1982
Cac8I	GCNNGC	4 cut(s)	27, 1596, 2125, 2132
CfoI	GCGC	2 cut(s)	154, 1723
Cfr10I	RCCGGY	1 cut(s)	190
Cfr13I	GGNCC	2 cut(s)	165, 1533
Cfr9I	CCCGGG	1 cut(s)	1183
CseI	GACGC	1 cut(s)	706
Csp6I	GTAC	3 cut(s)	1494, 1709, 2077
CspCI	CAANNNNNGTGG	2 cut(s)	18, 53
CviQI	GTAC	3 cut(s)	1494, 1709, 2077
DdeI	CTNAG	9 cut(s)	279, 426, 652, 939, 1126, 1510, 1653, 1698, 2044
DraI	TTTAAA	1 cut(s)	597
DraIII	CACNNNGTG	1 cut(s)	1897
Eam1104I	CTCTTC	2 cut(s)	404, 1848
EarI	CTCTTC	2 cut(s)	404, 1848
EciI	GGCGGA	1 cut(s)	1450
Ecl136II	GAGCTC	1 cut(s)	917
Eco130I	CCWWGG	3 cut(s)	679, 818, 1171
Eco147I	AGGCCT	1 cut(s)	1102
Eco24I	GRGCYC	1 cut(s)	919
Eco31I	GGTCTC	2 cut(s)	207, 711
Eco47I	GGWCC	1 cut(s)	165
Eco53kI	GAGCTC	1 cut(s)	917
Eco57I	CTGAAG	3 cut(s)	561, 1829, 2102
Eco88I	CYCGRG	1 cut(s)	1183
EcoICRI	GAGCTC	1 cut(s)	917
EcoO109I	RGGNCCY	1 cut(s)	1533
EcoRI	GAATTC	1 cut(s)	754
EcoRII	CCWGG	5 cut(s)	436, 1251, 1358, 1475, 2058
EcoT14I	CCWWGG	3 cut(s)	679, 818, 1171
EcoT22I	ATGCAT	2 cut(s)	642, 2158
EcoT38I	GRGCYC	1 cut(s)	919
ErhI	CCWWGG	3 cut(s)	679, 818, 1171
FalI	AAGNNNNNCTT	2 cut(s)	1339, 1371
FaqI	GGGAC	3 cut(s)	222, 709, 1916
FauI	CCCGC	1 cut(s)	1495
FbaI	TGATCA	1 cut(s)	2143
Fnu4HI	GCNGC	9 cut(s)	114, 957, 960, 1333, 1599, 1659, 2033, 2054, 2128
FriOI	GRGCYC	1 cut(s)	919
Fsp4HI	GCNGC	9 cut(s)	114, 957, 960, 1333, 1599, 1659, 2033, 2054, 2128
FspBI	CTAG	2 cut(s)	327, 1233
GlaI	GCGC	2 cut(s)	153, 1722
GluI	GCNGC	9 cut(s)	114, 957, 960, 1333, 1599, 1659, 2033, 2054, 2128
GsuI	CTGGAG	1 cut(s)	2042
HaeIII	GGCC	4 cut(s)	1102, 1256, 1535, 2112
HapII	CCGG	6 cut(s)	191, 228, 303, 1184, 1211, 1906
HgaI	GACGC	1 cut(s)	706
HhaI	GCGC	2 cut(s)	154, 1723
Hin6I	GCGC	2 cut(s)	152, 1721
HinP1I	GCGC	2 cut(s)	152, 1721
HincII	GTYRAC	3 cut(s)	475, 628, 1036
HindII	GTYRAC	3 cut(s)	475, 628, 1036
HpaII	CCGG	6 cut(s)	191, 228, 303, 1184, 1211, 1906
HphI	GGTGA	6 cut(s)	868, 1019, 1052, 1082, 1895, 2157
Hpy166II	GTNNAC	5 cut(s)	475, 628, 837, 1036, 1373
Hpy188I	TCNGA	6 cut(s)	760, 1000, 1153, 1306, 1548, 1848
Hpy188III	TCNNGA	7 cut(s)	160, 523, 539, 1112, 1211, 1674, 2046
Hpy8I	GTNNAC	5 cut(s)	475, 628, 837, 1036, 1373
Hpy99I	CGWCG	1 cut(s)	954
HpyAV	CCTTC	5 cut(s)	195, 409, 410, 707, 2095
HpyCH4III	ACNGT	5 cut(s)	338, 887, 1040, 1430, 1610
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1361, 1658, 1664, 1907
HpyF3I	CTNAG	9 cut(s)	279, 426, 652, 939, 1126, 1510, 1653, 1698, 2044
HspAI	GCGC	2 cut(s)	152, 1721
Kpn2I	TCCGGA	1 cut(s)	1210
KpnI	GGTACC	1 cut(s)	2080
Ksp22I	TGATCA	1 cut(s)	2143
Lsp1109I	GCAGC	9 cut(s)	125, 943, 971, 1319, 1610, 1670, 2044, 2065, 2139
MaeI	CTAG	2 cut(s)	327, 1233
MaeIII	GTNAC	4 cut(s)	1040, 1138, 1947, 2163
MboII	GAAGA	9 cut(s)	377, 421, 554, 871, 1256, 1310, 1329, 1835, 1955
MfeI	CAATTG	1 cut(s)	772
MflI	RGATCY	3 cut(s)	421, 464, 1714
MhlI	GDGCHC	2 cut(s)	839, 919
MlyI	GAGTC	3 cut(s)	248, 1037, 1301
Mph1103I	ATGCAT	2 cut(s)	642, 2158
MroI	TCCGGA	1 cut(s)	1210
MroXI	GAANNNNTTC	1 cut(s)	2206
MseI	TTAA	5 cut(s)	11, 588, 596, 801, 1080
MslI	CAYNNNNRTG	3 cut(s)	927, 1584, 1893
MspI	CCGG	6 cut(s)	191, 228, 303, 1184, 1211, 1906
MspR9I	CCNGG	9 cut(s)	228, 438, 1184, 1185, 1253, 1360, 1477, 1907, 2060
MunI	CAATTG	1 cut(s)	772
Mva1269I	GAATGC	2 cut(s)	556, 1855
MvaI	CCWGG	5 cut(s)	438, 1253, 1360, 1477, 2060
MwoI	GCNNNNNNNGC	4 cut(s)	1361, 1658, 1664, 1907
NciI	CCSGG	4 cut(s)	228, 1184, 1185, 1907
NcoI	CCATGG	1 cut(s)	679
NlaIV	GGNNCC	2 cut(s)	1867, 2078
NmeAIII	GCCGAG	1 cut(s)	127
NmuCI	GTSAC	3 cut(s)	1040, 1947, 2163
NsiI	ATGCAT	2 cut(s)	642, 2158
NspI	RCATGY	1 cut(s)	1526
PaqCI	CACCTGC	1 cut(s)	1657
PceI	AGGCCT	1 cut(s)	1102
PcsI	WCGNNNNNNNCGW	1 cut(s)	39
PctI	GAATGC	2 cut(s)	556, 1855
PdmI	GAANNNNTTC	1 cut(s)	2206
PfeI	GAWTC	7 cut(s)	126, 392, 1060, 1196, 1301, 1960, 1978
PfoI	TCCNGGA	1 cut(s)	2058
PkrI	GCNGC	9 cut(s)	115, 958, 961, 1334, 1600, 1660, 2034, 2055, 2129
PleI	GAGTC	3 cut(s)	248, 1037, 1301
PpsI	GAGTC	3 cut(s)	248, 1037, 1301
Psp124BI	GAGCTC	1 cut(s)	919
Psp6I	CCWGG	5 cut(s)	436, 1251, 1358, 1475, 2058
PspGI	CCWGG	5 cut(s)	436, 1251, 1358, 1475, 2058
PspN4I	GGNNCC	2 cut(s)	1867, 2078
PspPI	GGNCC	2 cut(s)	165, 1533
PstI	CTGCAG	4 cut(s)	961, 1204, 1600, 2129
PsuI	RGATCY	3 cut(s)	421, 464, 1714
RsaI	GTAC	3 cut(s)	1495, 1710, 2078
RsaNI	GTAC	3 cut(s)	1494, 1709, 2077
RseI	CAYNNNNRTG	3 cut(s)	927, 1584, 1893
SacI	GAGCTC	1 cut(s)	919
SaqAI	TTAA	5 cut(s)	11, 588, 596, 801, 1080
SatI	GCNGC	9 cut(s)	114, 957, 960, 1333, 1599, 1659, 2033, 2054, 2128
Sau96I	GGNCC	2 cut(s)	165, 1533
SchI	GAGTC	3 cut(s)	248, 1037, 1301
ScrFI	CCNGG	9 cut(s)	228, 438, 1184, 1185, 1253, 1360, 1477, 1907, 2060
SduI	GDGCHC	2 cut(s)	839, 919
SfcI	CTRYAG	4 cut(s)	957, 1200, 1596, 2125
SgrAI	CRCCGGYG	1 cut(s)	190
SinI	GGWCC	1 cut(s)	165
SmaI	CCCGGG	1 cut(s)	1185
SmiI	ATTTAAAT	1 cut(s)	597
SmiMI	CAYNNNNRTG	3 cut(s)	927, 1584, 1893
SmlI	CTYRAG	2 cut(s)	1624, 2071
SmoI	CTYRAG	2 cut(s)	1624, 2071
SseBI	AGGCCT	1 cut(s)	1102
SsiI	CCGC	6 cut(s)	78, 84, 134, 243, 1435, 1502
SspMI	CTAG	2 cut(s)	327, 1233
SstI	GAGCTC	1 cut(s)	919
StuI	AGGCCT	1 cut(s)	1102
StyD4I	CCNGG	9 cut(s)	226, 436, 1182, 1183, 1251, 1358, 1475, 1905, 2058
StyI	CCWWGG	3 cut(s)	679, 818, 1171
SwaI	ATTTAAAT	1 cut(s)	597
TaaI	ACNGT	5 cut(s)	338, 887, 1040, 1430, 1610
TaqI	TCGA	3 cut(s)	252, 949, 1407
TatI	WGTACW	1 cut(s)	1493
TfiI	GAWTC	7 cut(s)	126, 392, 1060, 1196, 1301, 1960, 1978
Tru1I	TTAA	5 cut(s)	11, 588, 596, 801, 1080
Tru9I	TTAA	5 cut(s)	11, 588, 596, 801, 1080
TscAI	CASTG	4 cut(s)	1636, 1668, 1956, 2034
TseFI	GTSAC	3 cut(s)	1040, 1947, 2163
TseI	GCWGC	9 cut(s)	113, 956, 959, 1332, 1598, 1658, 2032, 2053, 2127
Tsp45I	GTSAC	3 cut(s)	1040, 1947, 2163
TspGWI	ACGGA	3 cut(s)	1123, 1279, 1358
TspMI	CCCGGG	1 cut(s)	1183
TspRI	CASTG	4 cut(s)	1636, 1668, 1956, 2034
VneI	GTGCAC	1 cut(s)	835
VpaK11BI	GGWCC	1 cut(s)	165
XapI	RAATTY	6 cut(s)	533, 592, 754, 1550, 1745, 1783
XceI	RCATGY	1 cut(s)	1526
XmaI	CCCGGG	1 cut(s)	1183
XmnI	GAANNNNTTC	1 cut(s)	2206
XspI	CTAG	2 cut(s)	327, 1233
Zsp2I	ATGCAT	2 cut(s)	642, 2158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.