Tetratricopeptide repeat (TPR)-like superfamily protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07280 AT1G07280 AT1G07280 AT1G07280 AT2G29670 AT2G29670 |
| fragaria_vesca | FvH4_3g38330 FvH4_3g38330 |
| malus_domestica | MD03G1072800.v1.1 MD11G1078900.v1.1 |
| prunus_persica | Prupe.6G059600_v2.0.a1 Prupe.6G059600_v2.0.a1 |
| pyrus_communis | pycom03g05900 pycom08g09990 pycom10g05250 pycom11g06610 |
| rosa_chinensis | RchiOBHm_Chr5g0068901 |
| rosa_laevigata | RLG00000036019 |
| rosa_roxburghii | Rroxscaffold_1G00011830 |
| rosa_rugosa | Rorug05G0394200 Rorug05G0394300 Rorug05G0394400 |
| rosa_samantha | Rh5AG451400 Rh5BG470100 Rh5CG492600 Rh5DG483200 |
| rosa_wichuraiana | Rw5G042160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 554 |
| AatII | GACGTC | 1 cut(s) | 666 |
| Acc65I | GGTACC | 1 cut(s) | 356 |
| AccB1I | GGYRCC | 4 cut(s) | 188, 238, 356, 1697 |
| AccBSI | CCGCTC | 1 cut(s) | 1125 |
| AccI | GTMKAC | 3 cut(s) | 197, 594, 745 |
| AccII | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| AclWI | GGATC | 1 cut(s) | 1637 |
| AcoI | YGGCCR | 1 cut(s) | 524 |
| AcsI | RAATTY | 1 cut(s) | 1270 |
| AcuI | CTGAAG | 3 cut(s) | 403, 640, 1378 |
| AcvI | CACGTG | 1 cut(s) | 1710 |
| AcyI | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| AfaI | GTAC | 7 cut(s) | 358, 506, 875, 1166, 1391, 1514, 1568 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1062, 1581, 1585 |
| AflIII | ACRYGT | 2 cut(s) | 1707, 1709 |
| AgeI | ACCGGT | 1 cut(s) | 171 |
| AgsI | TTSAA | 4 cut(s) | 169, 978, 992, 1519 |
| AjnI | CCWGG | 1 cut(s) | 279 |
| AluBI | AGCT | 8 cut(s) | 17, 140, 343, 631, 730, 738, 938, 1505 |
| AluI | AGCT | 8 cut(s) | 17, 140, 343, 631, 730, 738, 938, 1505 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| Alw26I | GTCTC | 9 cut(s) | 102, 155, 234, 401, 429, 654, 1302, 1351, 1610 |
| AlwI | GGATC | 1 cut(s) | 1637 |
| AoxI | GGCC | 7 cut(s) | 524, 564, 675, 696, 793, 916, 1554 |
| ApeKI | GCWGC | 6 cut(s) | 40, 631, 640, 935, 956, 1607 |
| ApoI | RAATTY | 1 cut(s) | 1270 |
| AsiGI | ACCGGT | 1 cut(s) | 171 |
| Asp718I | GGTACC | 1 cut(s) | 356 |
| AspLEI | GCGC | 4 cut(s) | 241, 331, 428, 1700 |
| AsuC2I | CCSGG | 1 cut(s) | 560 |
| AsuHPI | GGTGA | 4 cut(s) | 19, 892, 1148, 1348 |
| AxyI | CCTNAGG | 1 cut(s) | 913 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 340, 373 |
| BanI | GGYRCC | 4 cut(s) | 188, 238, 356, 1697 |
| BanII | GRGCYC | 1 cut(s) | 142 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1559, 1591 |
| BbrPI | CACGTG | 1 cut(s) | 1710 |
| BbsI | GAAGAC | 1 cut(s) | 384 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BbvCI | CCTCAGC | 1 cut(s) | 1506 |
| BbvI | GCAGC | 6 cut(s) | 52, 618, 652, 947, 968, 1619 |
| BccI | CCATC | 6 cut(s) | 263, 641, 1127, 1133, 1252, 1340 |
| BceAI | ACGGC | 5 cut(s) | 148, 350, 430, 511, 1108 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 10, 44 |
| BciT130I | CCWGG | 1 cut(s) | 281 |
| BcnI | CCSGG | 1 cut(s) | 560 |
| BcoDI | GTCTC | 9 cut(s) | 102, 155, 234, 401, 429, 654, 1302, 1351, 1610 |
| BfaI | CTAG | 5 cut(s) | 80, 201, 791, 1319, 1721 |
| BfmI | CTRYAG | 2 cut(s) | 482, 746 |
| BfoI | RGCGCY | 3 cut(s) | 242, 332, 1701 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 126, 523 |
| BmcAI | AGTACT | 2 cut(s) | 1391, 1514 |
| Bme1390I | CCNGG | 2 cut(s) | 281, 560 |
| BmiI | GGNNCC | 8 cut(s) | 119, 190, 240, 358, 516, 1156, 1434, 1699 |
| BmrFI | CCNGG | 2 cut(s) | 281, 560 |
| BmrI | ACTGGG | 1 cut(s) | 1189 |
| BmsI | GCATC | 6 cut(s) | 451, 473, 579, 741, 801, 1395 |
| BmuI | ACTGGG | 1 cut(s) | 1189 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1175 |
| BpiI | GAAGAC | 1 cut(s) | 384 |
| BpmI | CTGGAG | 1 cut(s) | 1042 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1506 |
| BpuMI | CCSGG | 1 cut(s) | 560 |
| BsaAI | YACGTR | 1 cut(s) | 1710 |
| BsaHI | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| BsaI | GGTCTC | 1 cut(s) | 1610 |
| BsaJI | CCNNGG | 4 cut(s) | 124, 521, 1428, 1701 |
| BsaWI | WCCGGW | 1 cut(s) | 171 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 275, 305, 506, 536 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1062, 1581, 1585 |
| Bse118I | RCCGGY | 6 cut(s) | 171, 210, 946, 1351, 1540, 1694 |
| Bse1I | ACTGG | 4 cut(s) | 38, 1059, 1162, 1195 |
| Bse21I | CCTNAGG | 1 cut(s) | 913 |
| Bse3DI | GCAATG | 2 cut(s) | 641, 930 |
| BseBI | CCWGG | 1 cut(s) | 281 |
| BseDI | CCNNGG | 4 cut(s) | 124, 521, 1428, 1701 |
| BseGI | GGATG | 4 cut(s) | 477, 652, 1052, 1332 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1062, 1581, 1585 |
| BseMI | GCAATG | 2 cut(s) | 641, 930 |
| BseMII | CTCAG | 6 cut(s) | 86, 245, 346, 1392, 1481, 1497 |
| BseNI | ACTGG | 4 cut(s) | 38, 1059, 1162, 1195 |
| BseRI | GAGGAG | 3 cut(s) | 930, 1523, 1628 |
| BseXI | GCAGC | 6 cut(s) | 52, 618, 652, 947, 968, 1619 |
| BseYI | CCCAGC | 1 cut(s) | 1436 |
| BsgI | GTGCAG | 1 cut(s) | 821 |
| Bsh1236I | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| Bsh1285I | CGRYCG | 2 cut(s) | 176, 215 |
| BshFI | GGCC | 7 cut(s) | 526, 566, 677, 698, 795, 918, 1556 |
| BshNI | GGYRCC | 4 cut(s) | 188, 238, 356, 1697 |
| BshTI | ACCGGT | 1 cut(s) | 171 |
| BsiEI | CGRYCG | 2 cut(s) | 176, 215 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BsiSI | CCGG | 8 cut(s) | 172, 211, 560, 947, 1352, 1541, 1695, 1730 |
| BsiWI | CGTACG | 1 cut(s) | 504 |
| BslFI | GGGAC | 4 cut(s) | 542, 560, 1163, 1222 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1062, 1581, 1585 |
| BsmAI | GTCTC | 9 cut(s) | 102, 155, 234, 401, 429, 654, 1302, 1351, 1610 |
| BsmBI | CGTCTC | 5 cut(s) | 102, 429, 654, 1302, 1351 |
| BsmFI | GGGAC | 4 cut(s) | 542, 560, 1163, 1222 |
| BsnI | GGCC | 7 cut(s) | 526, 566, 677, 698, 795, 918, 1556 |
| Bso31I | GGTCTC | 1 cut(s) | 1610 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp143I | GATC | 2 cut(s) | 397, 1642 |
| BspANI | GGCC | 7 cut(s) | 526, 566, 677, 698, 795, 918, 1556 |
| BspCNI | CTCAG | 6 cut(s) | 85, 244, 345, 1393, 1480, 1498 |
| BspFNI | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| BspHI | TCATGA | 2 cut(s) | 879, 1489 |
| BspLI | GGNNCC | 8 cut(s) | 119, 190, 240, 358, 516, 1156, 1434, 1699 |
| BspPI | GGATC | 1 cut(s) | 1637 |
| BspT107I | GGYRCC | 4 cut(s) | 188, 238, 356, 1697 |
| BspTNI | GGTCTC | 1 cut(s) | 1610 |
| BsrBI | CCGCTC | 1 cut(s) | 1125 |
| BsrDI | GCAATG | 2 cut(s) | 641, 930 |
| BsrFI | RCCGGY | 6 cut(s) | 171, 210, 946, 1351, 1540, 1694 |
| BsrI | ACTGG | 4 cut(s) | 38, 1059, 1162, 1195 |
| BssAI | RCCGGY | 6 cut(s) | 171, 210, 946, 1351, 1540, 1694 |
| BssECI | CCNNGG | 4 cut(s) | 124, 521, 1428, 1701 |
| BssMI | GATC | 2 cut(s) | 397, 1642 |
| BssNI | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| BssT1I | CCWWGG | 1 cut(s) | 1428 |
| Bst2UI | CCWGG | 1 cut(s) | 281 |
| Bst4CI | ACNGT | 8 cut(s) | 356, 494, 904, 973, 1154, 1174, 1187, 1360 |
| Bst6I | CTCTTC | 2 cut(s) | 294, 1248 |
| BstACI | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| BstBAI | YACGTR | 1 cut(s) | 1710 |
| BstC8I | GCNNGC | 3 cut(s) | 277, 568, 1542 |
| BstDEI | CTNAG | 8 cut(s) | 72, 231, 332, 913, 1401, 1467, 1506, 1749 |
| BstDSI | CCRYGG | 2 cut(s) | 124, 521 |
| BstEII | GGTNACC | 1 cut(s) | 1354 |
| BstF5I | GGATG | 4 cut(s) | 477, 652, 1052, 1332 |
| BstFNI | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| BstH2I | RGCGCY | 3 cut(s) | 242, 332, 1701 |
| BstHHI | GCGC | 4 cut(s) | 241, 331, 428, 1700 |
| BstKTI | GATC | 2 cut(s) | 400, 1645 |
| BstMAI | GTCTC | 9 cut(s) | 102, 155, 234, 401, 429, 654, 1302, 1351, 1610 |
| BstMBI | GATC | 2 cut(s) | 397, 1642 |
| BstMCI | CGRYCG | 2 cut(s) | 176, 215 |
| BstNI | CCWGG | 1 cut(s) | 281 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1175 |
| BstPI | GGTNACC | 1 cut(s) | 1354 |
| BstSCI | CCNGG | 2 cut(s) | 279, 558 |
| BstSFI | CTRYAG | 2 cut(s) | 482, 746 |
| BstUI | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| BstV1I | GCAGC | 6 cut(s) | 52, 618, 652, 947, 968, 1619 |
| BstV2I | GAAGAC | 1 cut(s) | 384 |
| Bsu36I | CCTNAGG | 1 cut(s) | 913 |
| BsuRI | GGCC | 7 cut(s) | 526, 566, 677, 698, 795, 918, 1556 |
| BtgI | CCRYGG | 2 cut(s) | 124, 521 |
| BtsCI | GGATG | 4 cut(s) | 477, 652, 1052, 1332 |
| BtsI | GCAGTG | 2 cut(s) | 277, 1533 |
| BtsIMutI | CAGTG | 4 cut(s) | 31, 277, 1066, 1533 |
| Cac8I | GCNNGC | 3 cut(s) | 277, 568, 1542 |
| CciI | TCATGA | 2 cut(s) | 879, 1489 |
| CfoI | GCGC | 4 cut(s) | 241, 331, 428, 1700 |
| Cfr10I | RCCGGY | 6 cut(s) | 171, 210, 946, 1351, 1540, 1694 |
| Cfr42I | CCGCGG | 1 cut(s) | 127 |
| CseI | GACGC | 5 cut(s) | 270, 293, 378, 580, 1556 |
| Csp6I | GTAC | 7 cut(s) | 357, 505, 874, 1165, 1390, 1513, 1567 |
| CspAI | ACCGGT | 1 cut(s) | 171 |
| CviAII | CATG | 3 cut(s) | 709, 880, 1490 |
| CviQI | GTAC | 7 cut(s) | 357, 505, 874, 1165, 1390, 1513, 1567 |
| DdeI | CTNAG | 8 cut(s) | 72, 231, 332, 913, 1401, 1467, 1506, 1749 |
| DinI | GGCGCC | 2 cut(s) | 240, 1699 |
| DpnI | GATC | 2 cut(s) | 399, 1644 |
| DpnII | GATC | 2 cut(s) | 397, 1642 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 554 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 554 |
| EaeI | YGGCCR | 1 cut(s) | 524 |
| Eam1104I | CTCTTC | 2 cut(s) | 294, 1248 |
| EarI | CTCTTC | 2 cut(s) | 294, 1248 |
| EciI | GGCGGA | 5 cut(s) | 130, 150, 1100, 1110, 1559 |
| Ecl136II | GAGCTC | 1 cut(s) | 140 |
| Eco130I | CCWWGG | 1 cut(s) | 1428 |
| Eco147I | AGGCCT | 2 cut(s) | 698, 1556 |
| Eco24I | GRGCYC | 1 cut(s) | 142 |
| Eco31I | GGTCTC | 1 cut(s) | 1610 |
| Eco53kI | GAGCTC | 1 cut(s) | 140 |
| Eco57I | CTGAAG | 3 cut(s) | 403, 640, 1378 |
| Eco72I | CACGTG | 1 cut(s) | 1710 |
| Eco81I | CCTNAGG | 1 cut(s) | 913 |
| Eco91I | GGTNACC | 1 cut(s) | 1354 |
| EcoICRI | GAGCTC | 1 cut(s) | 140 |
| EcoO65I | GGTNACC | 1 cut(s) | 1354 |
| EcoRI | GAATTC | 1 cut(s) | 1270 |
| EcoRII | CCWGG | 1 cut(s) | 279 |
| EcoT14I | CCWWGG | 1 cut(s) | 1428 |
| EcoT22I | ATGCAT | 1 cut(s) | 466 |
| EcoT38I | GRGCYC | 1 cut(s) | 142 |
| EgeI | GGCGCC | 2 cut(s) | 240, 1699 |
| EheI | GGCGCC | 2 cut(s) | 240, 1699 |
| ErhI | CCWWGG | 1 cut(s) | 1428 |
| Esp3I | CGTCTC | 5 cut(s) | 102, 429, 654, 1302, 1351 |
| FaeI | CATG | 3 cut(s) | 712, 883, 1493 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 683, 715 |
| FaqI | GGGAC | 4 cut(s) | 542, 560, 1163, 1222 |
| FatI | CATG | 3 cut(s) | 708, 879, 1489 |
| FauI | CCCGC | 1 cut(s) | 1094 |
| FblI | GTMKAC | 3 cut(s) | 197, 594, 745 |
| FokI | GGATG | 4 cut(s) | 484, 659, 1039, 1319 |
| FriOI | GRGCYC | 1 cut(s) | 142 |
| FspBI | CTAG | 5 cut(s) | 80, 201, 791, 1319, 1721 |
| GlaI | GCGC | 4 cut(s) | 240, 330, 427, 1699 |
| GsaI | CCCAGC | 1 cut(s) | 1440 |
| GsuI | CTGGAG | 1 cut(s) | 1042 |
| HaeII | RGCGCY | 3 cut(s) | 242, 332, 1701 |
| HaeIII | GGCC | 7 cut(s) | 526, 566, 677, 698, 795, 918, 1556 |
| HapII | CCGG | 8 cut(s) | 172, 211, 560, 947, 1352, 1541, 1695, 1730 |
| HgaI | GACGC | 5 cut(s) | 270, 293, 378, 580, 1556 |
| HhaI | GCGC | 4 cut(s) | 241, 331, 428, 1700 |
| Hin1I | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| Hin1II | CATG | 3 cut(s) | 712, 883, 1493 |
| Hin6I | GCGC | 4 cut(s) | 239, 329, 426, 1698 |
| HinP1I | GCGC | 4 cut(s) | 239, 329, 426, 1698 |
| HincII | GTYRAC | 2 cut(s) | 198, 595 |
| HindII | GTYRAC | 2 cut(s) | 198, 595 |
| HpaII | CCGG | 8 cut(s) | 172, 211, 560, 947, 1352, 1541, 1695, 1730 |
| HphI | GGTGA | 4 cut(s) | 19, 892, 1148, 1348 |
| Hpy166II | GTNNAC | 6 cut(s) | 198, 595, 746, 874, 907, 985 |
| Hpy8I | GTNNAC | 6 cut(s) | 198, 595, 746, 874, 907, 985 |
| HpyAV | CCTTC | 7 cut(s) | 75, 229, 298, 574, 688, 1460, 1585 |
| HpyCH4III | ACNGT | 8 cut(s) | 356, 494, 904, 973, 1154, 1174, 1187, 1360 |
| HpyCH4IV | ACGT | 6 cut(s) | 156, 447, 663, 876, 987, 1709 |
| HpyF3I | CTNAG | 8 cut(s) | 72, 231, 332, 913, 1401, 1467, 1506, 1749 |
| HpySE526I | ACGT | 6 cut(s) | 156, 447, 663, 876, 987, 1709 |
| Hsp92I | GRCGYC | 4 cut(s) | 239, 285, 663, 1698 |
| Hsp92II | CATG | 3 cut(s) | 712, 883, 1493 |
| HspAI | GCGC | 4 cut(s) | 239, 329, 426, 1698 |
| KasI | GGCGCC | 2 cut(s) | 238, 1697 |
| KpnI | GGTACC | 1 cut(s) | 360 |
| KroI | GCCGGC | 1 cut(s) | 1540 |
| KroNI | GCCGGC | 1 cut(s) | 1542 |
| KspI | CCGCGG | 1 cut(s) | 127 |
| Kzo9I | GATC | 2 cut(s) | 397, 1642 |
| LmnI | GCTCC | 7 cut(s) | 117, 137, 514, 615, 943, 1122, 1237 |
| Lsp1109I | GCAGC | 6 cut(s) | 52, 618, 652, 947, 968, 1619 |
| LweI | GCATC | 6 cut(s) | 451, 473, 579, 741, 801, 1395 |
| MaeI | CTAG | 5 cut(s) | 80, 201, 791, 1319, 1721 |
| MaeII | ACGT | 6 cut(s) | 156, 447, 663, 876, 987, 1709 |
| MaeIII | GTNAC | 1 cut(s) | 1354 |
| MalI | GATC | 2 cut(s) | 399, 1644 |
| MbiI | CCGCTC | 1 cut(s) | 1125 |
| MboI | GATC | 2 cut(s) | 397, 1642 |
| MboII | GAAGA | 8 cut(s) | 311, 322, 325, 384, 703, 785, 1265, 1295 |
| MfeI | CAATTG | 1 cut(s) | 45 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 8 cut(s) | 45, 90, 323, 1013, 1270, 1441, 1459, 1669 |
| Mly113I | GGCGCC | 2 cut(s) | 239, 1698 |
| MlyI | GAGTC | 5 cut(s) | 236, 403, 856, 1235, 1718 |
| MmeI | TCCRAC | 4 cut(s) | 318, 372, 510, 1182 |
| Mph1103I | ATGCAT | 1 cut(s) | 466 |
| MroNI | GCCGGC | 1 cut(s) | 1540 |
| MseI | TTAA | 1 cut(s) | 1635 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1494 |
| MspA1I | CMGCKG | 2 cut(s) | 126, 423 |
| MspI | CCGG | 8 cut(s) | 172, 211, 560, 947, 1352, 1541, 1695, 1730 |
| MspR9I | CCNGG | 2 cut(s) | 281, 560 |
| MunI | CAATTG | 1 cut(s) | 45 |
| MvaI | CCWGG | 1 cut(s) | 281 |
| MvnI | CGCG | 4 cut(s) | 126, 264, 389, 1550 |
| NaeI | GCCGGC | 1 cut(s) | 1542 |
| NarI | GGCGCC | 2 cut(s) | 239, 1698 |
| NciI | CCSGG | 1 cut(s) | 560 |
| NdeII | GATC | 2 cut(s) | 397, 1642 |
| NgoMIV | GCCGGC | 1 cut(s) | 1540 |
| NlaIII | CATG | 3 cut(s) | 712, 883, 1493 |
| NlaIV | GGNNCC | 8 cut(s) | 119, 190, 240, 358, 516, 1156, 1434, 1699 |
| NmeAIII | GCCGAG | 3 cut(s) | 267, 821, 1726 |
| NmuCI | GTSAC | 1 cut(s) | 1354 |
| NsiI | ATGCAT | 1 cut(s) | 466 |
| PagI | TCATGA | 2 cut(s) | 879, 1489 |
| PceI | AGGCCT | 2 cut(s) | 698, 1556 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 101, 291, 444, 453 |
| PdiI | GCCGGC | 1 cut(s) | 1542 |
| Pfl23II | CGTACG | 1 cut(s) | 504 |
| PfoI | TCCNGGA | 1 cut(s) | 558 |
| PinAI | ACCGGT | 1 cut(s) | 171 |
| PleI | GAGTC | 5 cut(s) | 235, 403, 856, 1234, 1718 |
| PluTI | GGCGCC | 2 cut(s) | 242, 1701 |
| PmaCI | CACGTG | 1 cut(s) | 1710 |
| PmlI | CACGTG | 1 cut(s) | 1710 |
| PpsI | GAGTC | 5 cut(s) | 235, 403, 856, 1234, 1718 |
| Ppu21I | YACGTR | 1 cut(s) | 1710 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1175 |
| Psp124BI | GAGCTC | 1 cut(s) | 142 |
| Psp6I | CCWGG | 1 cut(s) | 279 |
| PspCI | CACGTG | 1 cut(s) | 1710 |
| PspEI | GGTNACC | 1 cut(s) | 1354 |
| PspFI | CCCAGC | 1 cut(s) | 1436 |
| PspGI | CCWGG | 1 cut(s) | 279 |
| PspLI | CGTACG | 1 cut(s) | 504 |
| PspN4I | GGNNCC | 8 cut(s) | 119, 190, 240, 358, 516, 1156, 1434, 1699 |
| RsaI | GTAC | 7 cut(s) | 358, 506, 875, 1166, 1391, 1514, 1568 |
| RsaNI | GTAC | 7 cut(s) | 357, 505, 874, 1165, 1390, 1513, 1567 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1494 |
| SacI | GAGCTC | 1 cut(s) | 142 |
| SacII | CCGCGG | 1 cut(s) | 127 |
| SalI | GTCGAC | 2 cut(s) | 196, 593 |
| SaqAI | TTAA | 1 cut(s) | 1635 |
| Sau3AI | GATC | 2 cut(s) | 397, 1642 |
| ScaI | AGTACT | 2 cut(s) | 1391, 1514 |
| SchI | GAGTC | 5 cut(s) | 236, 403, 856, 1235, 1718 |
| ScrFI | CCNGG | 2 cut(s) | 281, 560 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SfaNI | GCATC | 6 cut(s) | 451, 473, 579, 741, 801, 1395 |
| SfcI | CTRYAG | 2 cut(s) | 482, 746 |
| SfoI | GGCGCC | 2 cut(s) | 240, 1699 |
| Sfr303I | CCGCGG | 1 cut(s) | 127 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1694 |
| SgrBI | CCGCGG | 1 cut(s) | 127 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1494 |
| Sse9I | AATT | 8 cut(s) | 45, 90, 323, 1013, 1270, 1441, 1459, 1669 |
| SseBI | AGGCCT | 2 cut(s) | 698, 1556 |
| SspDI | GGCGCC | 2 cut(s) | 238, 1697 |
| SspMI | CTAG | 5 cut(s) | 80, 201, 791, 1319, 1721 |
| SstI | GAGCTC | 1 cut(s) | 142 |
| StuI | AGGCCT | 2 cut(s) | 698, 1556 |
| StyD4I | CCNGG | 2 cut(s) | 279, 558 |
| StyI | CCWWGG | 1 cut(s) | 1428 |
| TaaI | ACNGT | 8 cut(s) | 356, 494, 904, 973, 1154, 1174, 1187, 1360 |
| TaiI | ACGT | 6 cut(s) | 159, 450, 666, 879, 990, 1712 |
| TasI | AATT | 8 cut(s) | 45, 90, 323, 1013, 1270, 1441, 1459, 1669 |
| TatI | WGTACW | 3 cut(s) | 1164, 1389, 1512 |
| TauI | GCSGC | 8 cut(s) | 123, 126, 129, 365, 426, 929, 1128, 1667 |
| Tru1I | TTAA | 1 cut(s) | 1635 |
| Tru9I | TTAA | 1 cut(s) | 1635 |
| TscAI | CASTG | 4 cut(s) | 38, 277, 1066, 1533 |
| TseFI | GTSAC | 1 cut(s) | 1354 |
| TseI | GCWGC | 6 cut(s) | 40, 631, 640, 935, 956, 1607 |
| Tsp45I | GTSAC | 1 cut(s) | 1354 |
| TspDTI | ATGAA | 3 cut(s) | 704, 706, 722 |
| TspGWI | ACGGA | 6 cut(s) | 90, 447, 486, 510, 556, 592 |
| TspRI | CASTG | 4 cut(s) | 38, 277, 1066, 1533 |
| XapI | RAATTY | 1 cut(s) | 1270 |
| XbaI | TCTAGA | 2 cut(s) | 1318, 1720 |
| XmiI | GTMKAC | 3 cut(s) | 197, 594, 745 |
| XspI | CTAG | 5 cut(s) | 80, 201, 791, 1319, 1721 |
| ZraI | GACGTC | 1 cut(s) | 664 |
| ZrmI | AGTACT | 2 cut(s) | 1391, 1514 |
| Zsp2I | ATGCAT | 1 cut(s) | 466 |