Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0006116

Physical Location & Seq

Genomic Coordinates Reverse (-)

77376378 .. 77378458

Gene Structure 2081 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG451400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGTGGTGAAAGTAGCTTCGACCTGTTTGCACTGGTCGCAGCCAATTGTTCCTCACTCTACGCCTTACTCTCAGACCCTAGCCTCCGCTATTTCGTCTCCGTCGTCAAATAGGCGGAGCCGCCGCGGCGACGGCGGAGCTCTGTTGTGTCTCTACGTTCAGAAGTTGAACCGGTCGGCTCTGTTCGGCACCCCGTCGACTAGGCTACGCCGGTCGCAGTCTTGCGAGTCTCAGAAGGCGCCGAGAAATCGAGCCATCAGACGCGGTTGCAGTGCGAGCCTGGACGCCTTCTCCGACGAAGAGTTCTCGAAGAAGATTCAGGAATTGGCGCTCAGATTCCAGCTCTCCGACGACGGTACCGCCGCCGTTAGTTCAGAACCAGAAACCGCGTCTTCTGATCTAACGGAGACTCACGGCGTCAGCGGCGCATACGGAGACGATTTCGACGTTTTGAGCGACGATGCATCGAGGATGAGGTTTCTACAGAGCAACAGTCCGTTCCCGCACGATTTGGAGCCTCCGTGGCCGTCGGATTGGCAACGGAGGGACGAGATTGTCCCGGAGGCCAGCATCGAACGGAAGGCGAACAGCGTCGAACTCCCTCTTTCGCTCCGAATCATAAAGAGGAAGCTGCAATGGCAGCAGGATGGCTACTTCAGAGACGTCGGCGAATCGGCCTATTGCTCGATGAAGAAGGCCTTTTCTTGCATGGTGTTCATAATCCGAGAGCTCCATAGCTCTTGTCTACAGATGCGAGAGGCTCTGTTCTACGAAGATTTACAGGGGATTCTAGGCCGAGTGCAGAAAGAGATGCACGATTCGTTTGTGTGGCTGTTTCAGCAAGTTTTCTCTCAAACACCGACTCTAATGGTGTATGTCATGATTCTATTAGCCAATTTCACCGTCCACTCCTTAGGCCACAACGCCGCCATTGCAGCTCCTCCACCGGCTTATGCAGCCACAGCAGAAACAGTTTCAATCATGGACGTTCAAGATGACCAGAAATCTCCCCAATTCGATTCCTCAACAAGTAAATCGTTCTCTGTTTCGTCATCCTCCAGTGGGAACACGACTCCCATTGGAGGAAACAACGGCGGAGGCGGGAATGTCCGCCCCGTCGGGAGCGGCACAGATGGTGATGGTGGGTTTGACGGTTCCGACCAGTACCGGACAATCGTCCCCGACGGTGCTTCCCAATTGTCTATGGGGACAACCAGAGAAGCAGAGTCGGTTTCGGAGCAAGAGAGCAGAGAAGAGATGGCTCTGTGGAATTCAGTAGTGGAAGAAGCAAATCAAATGCAAGGCAGAGACGAATCTCTAGACCAAGAAACCATCCAGAGATTCGTCTCGCCGGTCACCGTAGATATGGAAAGTGATGATTACGCAGAGTACTTCAGAACTGAGATGCTCTACCAATCGGAGTTATCCAAGGAACCCAGCAATTCTCTCCTCCTCTCCAATTACGCTCAGTTCCTCTACCAAGTCGCTCATGACTATGATAGAGCTGAGGAGTACTTCAAGAGGGCAGTGGGGGTTGAGCCGGCGGACGCGGAGGCGTACAATAAGTATGCCACCTTCCTTTGGAGGGCGAGAAACGACTTGTGGGCAGCGGAGGAGACCTACTTGGAAGCCATTAACGCTGATCCGAGCAACTCCTACTATGCTGCTAATTACGCTCATTTTCTCTGGAACACGGGCGCCGAGGACACGTGTTTCCCTCTAGACTCGCCGGACGCCGCCCAAGACGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_17 TPR_19

Protein Analysis

583

Amino Acids

64.79

Weight (kDa)

4.72

Isoelectric Point (pI)

60.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07280 AT1G07280 AT1G07280 AT1G07280 AT2G29670 AT2G29670
fragaria_vesca	FvH4_3g38330 FvH4_3g38330
malus_domestica	MD03G1072800.v1.1 MD11G1078900.v1.1
prunus_persica	Prupe.6G059600_v2.0.a1 Prupe.6G059600_v2.0.a1
pyrus_communis	pycom03g05900 pycom08g09990 pycom10g05250 pycom11g06610
rosa_chinensis	RchiOBHm_Chr5g0068901
rosa_laevigata	RLG00000036019
rosa_roxburghii	Rroxscaffold_1G00011830
rosa_rugosa	Rorug05G0394200 Rorug05G0394300 Rorug05G0394400
rosa_samantha	Rh5AG451400 Rh5BG470100 Rh5CG492600 Rh5DG483200
rosa_wichuraiana	Rw5G042160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	554
AatII	GACGTC	1 cut(s)	666
Acc65I	GGTACC	1 cut(s)	356
AccB1I	GGYRCC	4 cut(s)	188, 238, 356, 1697
AccBSI	CCGCTC	1 cut(s)	1125
AccI	GTMKAC	2 cut(s)	197, 745
AccII	CGCG	4 cut(s)	126, 264, 389, 1550
AclWI	GGATC	1 cut(s)	1637
AcoI	YGGCCR	1 cut(s)	524
AcsI	RAATTY	1 cut(s)	1270
AcuI	CTGAAG	2 cut(s)	640, 1378
AcvI	CACGTG	1 cut(s)	1710
AcyI	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
AfaI	GTAC	5 cut(s)	358, 1166, 1391, 1514, 1559
AfiI	CCNNNNNNNGG	4 cut(s)	1062, 1082, 1581, 1585
AflIII	ACRYGT	2 cut(s)	1707, 1709
AgeI	ACCGGT	1 cut(s)	171
AgsI	TTSAA	4 cut(s)	169, 978, 992, 1519
AjnI	CCWGG	1 cut(s)	279
AluBI	AGCT	8 cut(s)	17, 140, 343, 631, 730, 738, 938, 1505
AluI	AGCT	8 cut(s)	17, 140, 343, 631, 730, 738, 938, 1505
Alw21I	GWGCWC	2 cut(s)	142, 732
Alw26I	GTCTC	9 cut(s)	102, 155, 234, 401, 429, 654, 1302, 1351, 1610
AlwI	GGATC	1 cut(s)	1637
AoxI	GGCC	6 cut(s)	524, 564, 675, 696, 793, 916
ApeKI	GCWGC	7 cut(s)	40, 631, 640, 935, 956, 1607, 1664
ApoI	RAATTY	1 cut(s)	1270
AsiGI	ACCGGT	1 cut(s)	171
Asp718I	GGTACC	1 cut(s)	356
AspLEI	GCGC	4 cut(s)	241, 331, 428, 1700
AsuC2I	CCSGG	1 cut(s)	560
AsuHPI	GGTGA	4 cut(s)	19, 892, 1148, 1348
AxyI	CCTNAGG	1 cut(s)	913
BaeI	ACNNNNGTAYC	2 cut(s)	340, 373
BanI	GGYRCC	4 cut(s)	188, 238, 356, 1697
BanII	GRGCYC	2 cut(s)	142, 732
BarI	GAAGNNNNNNTAC	2 cut(s)	1559, 1591
BbrPI	CACGTG	1 cut(s)	1710
BbsI	GAAGAC	1 cut(s)	384
Bbv12I	GWGCWC	2 cut(s)	142, 732
BbvCI	CCTCAGC	1 cut(s)	1506
BbvI	GCAGC	7 cut(s)	52, 618, 652, 947, 968, 1619, 1651
BccI	CCATC	6 cut(s)	263, 641, 1127, 1133, 1252, 1340
BceAI	ACGGC	5 cut(s)	148, 350, 430, 511, 1108
BcgI	CGANNNNNNTGC	2 cut(s)	10, 44
BciT130I	CCWGG	1 cut(s)	281
BcnI	CCSGG	1 cut(s)	560
BcoDI	GTCTC	9 cut(s)	102, 155, 234, 401, 429, 654, 1302, 1351, 1610
BfaI	CTAG	5 cut(s)	80, 201, 791, 1319, 1721
BfmI	CTRYAG	2 cut(s)	482, 746
BfoI	RGCGCY	3 cut(s)	242, 332, 1701
BglI	GCCNNNNNGGC	2 cut(s)	126, 523
BmcAI	AGTACT	2 cut(s)	1391, 1514
Bme1390I	CCNGG	2 cut(s)	281, 560
BmiI	GGNNCC	8 cut(s)	119, 190, 240, 358, 516, 1156, 1434, 1699
BmrFI	CCNGG	2 cut(s)	281, 560
BmsI	GCATC	6 cut(s)	451, 473, 579, 741, 801, 1395
BoxI	GACNNNNGTC	1 cut(s)	1175
BpiI	GAAGAC	1 cut(s)	384
BpmI	CTGGAG	1 cut(s)	1042
Bpu10I	CCTNAGC	1 cut(s)	1506
BpuMI	CCSGG	1 cut(s)	560
BsaAI	YACGTR	1 cut(s)	1710
BsaHI	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
BsaI	GGTCTC	1 cut(s)	1610
BsaJI	CCNNGG	4 cut(s)	124, 521, 1428, 1701
BsaWI	WCCGGW	2 cut(s)	171, 1167
BsaXI	ACNNNNNCTCC	4 cut(s)	275, 305, 506, 536
Bsc4I	CCNNNNNNNGG	4 cut(s)	1062, 1082, 1581, 1585
Bse118I	RCCGGY	5 cut(s)	171, 210, 946, 1351, 1540
Bse1I	ACTGG	3 cut(s)	38, 1059, 1162
Bse21I	CCTNAGG	1 cut(s)	913
Bse3DI	GCAATG	2 cut(s)	641, 930
BseBI	CCWGG	1 cut(s)	281
BseDI	CCNNGG	4 cut(s)	124, 521, 1428, 1701
BseGI	GGATG	4 cut(s)	477, 652, 1052, 1332
BseLI	CCNNNNNNNGG	4 cut(s)	1062, 1082, 1581, 1585
BseMI	GCAATG	2 cut(s)	641, 930
BseMII	CTCAG	6 cut(s)	86, 245, 346, 1392, 1481, 1497
BseNI	ACTGG	3 cut(s)	38, 1059, 1162
BseRI	GAGGAG	5 cut(s)	930, 1439, 1442, 1523, 1628
BseXI	GCAGC	7 cut(s)	52, 618, 652, 947, 968, 1619, 1651
BseYI	CCCAGC	1 cut(s)	1436
BsgI	GTGCAG	1 cut(s)	821
Bsh1236I	CGCG	4 cut(s)	126, 264, 389, 1550
Bsh1285I	CGRYCG	2 cut(s)	176, 215
BshFI	GGCC	6 cut(s)	526, 566, 677, 698, 795, 918
BshNI	GGYRCC	4 cut(s)	188, 238, 356, 1697
BshTI	ACCGGT	1 cut(s)	171
BsiEI	CGRYCG	2 cut(s)	176, 215
BsiHKAI	GWGCWC	2 cut(s)	142, 732
BsiSI	CCGG	8 cut(s)	172, 211, 560, 947, 1168, 1352, 1541, 1730
BslFI	GGGAC	4 cut(s)	542, 560, 1163, 1222
BslI	CCNNNNNNNGG	4 cut(s)	1062, 1082, 1581, 1585
BsmAI	GTCTC	9 cut(s)	102, 155, 234, 401, 429, 654, 1302, 1351, 1610
BsmBI	CGTCTC	5 cut(s)	102, 429, 654, 1302, 1351
BsmFI	GGGAC	4 cut(s)	542, 560, 1163, 1222
BsnI	GGCC	6 cut(s)	526, 566, 677, 698, 795, 918
Bso31I	GGTCTC	1 cut(s)	1610
Bsp1286I	GDGCHC	2 cut(s)	142, 732
Bsp143I	GATC	2 cut(s)	397, 1642
BspANI	GGCC	6 cut(s)	526, 566, 677, 698, 795, 918
BspCNI	CTCAG	6 cut(s)	85, 244, 345, 1393, 1480, 1498
BspFNI	CGCG	4 cut(s)	126, 264, 389, 1550
BspHI	TCATGA	2 cut(s)	879, 1489
BspLI	GGNNCC	8 cut(s)	119, 190, 240, 358, 516, 1156, 1434, 1699
BspPI	GGATC	1 cut(s)	1637
BspT107I	GGYRCC	4 cut(s)	188, 238, 356, 1697
BspTNI	GGTCTC	1 cut(s)	1610
BsrBI	CCGCTC	1 cut(s)	1125
BsrDI	GCAATG	2 cut(s)	641, 930
BsrFI	RCCGGY	5 cut(s)	171, 210, 946, 1351, 1540
BsrI	ACTGG	3 cut(s)	38, 1059, 1162
BssAI	RCCGGY	5 cut(s)	171, 210, 946, 1351, 1540
BssECI	CCNNGG	4 cut(s)	124, 521, 1428, 1701
BssMI	GATC	2 cut(s)	397, 1642
BssNI	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
BssT1I	CCWWGG	1 cut(s)	1428
Bst2UI	CCWGG	1 cut(s)	281
Bst4CI	ACNGT	7 cut(s)	356, 494, 904, 973, 1154, 1187, 1360
Bst6I	CTCTTC	2 cut(s)	294, 1248
BstACI	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
BstBAI	YACGTR	1 cut(s)	1710
BstC8I	GCNNGC	3 cut(s)	277, 568, 1542
BstDEI	CTNAG	8 cut(s)	72, 231, 332, 913, 1401, 1467, 1506, 1749
BstDSI	CCRYGG	2 cut(s)	124, 521
BstEII	GGTNACC	1 cut(s)	1354
BstF5I	GGATG	4 cut(s)	477, 652, 1052, 1332
BstFNI	CGCG	4 cut(s)	126, 264, 389, 1550
BstH2I	RGCGCY	3 cut(s)	242, 332, 1701
BstHHI	GCGC	4 cut(s)	241, 331, 428, 1700
BstKTI	GATC	2 cut(s)	400, 1645
BstMAI	GTCTC	9 cut(s)	102, 155, 234, 401, 429, 654, 1302, 1351, 1610
BstMBI	GATC	2 cut(s)	397, 1642
BstMCI	CGRYCG	2 cut(s)	176, 215
BstNI	CCWGG	1 cut(s)	281
BstPAI	GACNNNNGTC	1 cut(s)	1175
BstPI	GGTNACC	1 cut(s)	1354
BstSCI	CCNGG	2 cut(s)	279, 558
BstSFI	CTRYAG	2 cut(s)	482, 746
BstUI	CGCG	4 cut(s)	126, 264, 389, 1550
BstV1I	GCAGC	7 cut(s)	52, 618, 652, 947, 968, 1619, 1651
BstV2I	GAAGAC	1 cut(s)	384
Bsu36I	CCTNAGG	1 cut(s)	913
BsuRI	GGCC	6 cut(s)	526, 566, 677, 698, 795, 918
BtgI	CCRYGG	2 cut(s)	124, 521
BtsCI	GGATG	4 cut(s)	477, 652, 1052, 1332
BtsI	GCAGTG	2 cut(s)	277, 1533
BtsIMutI	CAGTG	4 cut(s)	31, 277, 1066, 1533
Cac8I	GCNNGC	3 cut(s)	277, 568, 1542
CciI	TCATGA	2 cut(s)	879, 1489
CfoI	GCGC	4 cut(s)	241, 331, 428, 1700
Cfr10I	RCCGGY	5 cut(s)	171, 210, 946, 1351, 1540
Cfr42I	CCGCGG	1 cut(s)	127
CseI	GACGC	7 cut(s)	270, 293, 378, 406, 580, 1556, 1742
Csp6I	GTAC	5 cut(s)	357, 1165, 1390, 1513, 1558
CspAI	ACCGGT	1 cut(s)	171
CviAII	CATG	4 cut(s)	709, 880, 982, 1490
CviQI	GTAC	5 cut(s)	357, 1165, 1390, 1513, 1558
DdeI	CTNAG	8 cut(s)	72, 231, 332, 913, 1401, 1467, 1506, 1749
DinI	GGCGCC	2 cut(s)	240, 1699
DpnI	GATC	2 cut(s)	399, 1644
DpnII	GATC	2 cut(s)	397, 1642
DrdI	GACNNNNNNGTC	1 cut(s)	554
DseDI	GACNNNNNNGTC	1 cut(s)	554
EaeI	YGGCCR	1 cut(s)	524
Eam1104I	CTCTTC	2 cut(s)	294, 1248
EarI	CTCTTC	2 cut(s)	294, 1248
EciI	GGCGGA	5 cut(s)	130, 150, 1100, 1110, 1559
Ecl136II	GAGCTC	2 cut(s)	140, 730
Eco130I	CCWWGG	1 cut(s)	1428
Eco147I	AGGCCT	1 cut(s)	698
Eco24I	GRGCYC	2 cut(s)	142, 732
Eco31I	GGTCTC	1 cut(s)	1610
Eco53kI	GAGCTC	2 cut(s)	140, 730
Eco57I	CTGAAG	2 cut(s)	640, 1378
Eco72I	CACGTG	1 cut(s)	1710
Eco81I	CCTNAGG	1 cut(s)	913
Eco91I	GGTNACC	1 cut(s)	1354
EcoICRI	GAGCTC	2 cut(s)	140, 730
EcoO65I	GGTNACC	1 cut(s)	1354
EcoRI	GAATTC	1 cut(s)	1270
EcoRII	CCWGG	1 cut(s)	279
EcoT14I	CCWWGG	1 cut(s)	1428
EcoT22I	ATGCAT	1 cut(s)	466
EcoT38I	GRGCYC	2 cut(s)	142, 732
EgeI	GGCGCC	2 cut(s)	240, 1699
EheI	GGCGCC	2 cut(s)	240, 1699
ErhI	CCWWGG	1 cut(s)	1428
Esp3I	CGTCTC	5 cut(s)	102, 429, 654, 1302, 1351
FaeI	CATG	4 cut(s)	712, 883, 985, 1493
FalI	AAGNNNNNCTT	2 cut(s)	683, 715
FaqI	GGGAC	4 cut(s)	542, 560, 1163, 1222
FatI	CATG	4 cut(s)	708, 879, 981, 1489
FauI	CCCGC	2 cut(s)	510, 1094
FblI	GTMKAC	2 cut(s)	197, 745
FokI	GGATG	4 cut(s)	484, 659, 1039, 1319
FriOI	GRGCYC	2 cut(s)	142, 732
FspBI	CTAG	5 cut(s)	80, 201, 791, 1319, 1721
GlaI	GCGC	4 cut(s)	240, 330, 427, 1699
GsaI	CCCAGC	1 cut(s)	1440
GsuI	CTGGAG	1 cut(s)	1042
HaeII	RGCGCY	3 cut(s)	242, 332, 1701
HaeIII	GGCC	6 cut(s)	526, 566, 677, 698, 795, 918
HapII	CCGG	8 cut(s)	172, 211, 560, 947, 1168, 1352, 1541, 1730
HgaI	GACGC	7 cut(s)	270, 293, 378, 406, 580, 1556, 1742
HhaI	GCGC	4 cut(s)	241, 331, 428, 1700
Hin1I	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
Hin1II	CATG	4 cut(s)	712, 883, 985, 1493
Hin6I	GCGC	4 cut(s)	239, 329, 426, 1698
HinP1I	GCGC	4 cut(s)	239, 329, 426, 1698
HincII	GTYRAC	1 cut(s)	198
HindII	GTYRAC	1 cut(s)	198
HpaII	CCGG	8 cut(s)	172, 211, 560, 947, 1168, 1352, 1541, 1730
HphI	GGTGA	4 cut(s)	19, 892, 1148, 1348
Hpy166II	GTNNAC	3 cut(s)	198, 746, 907
Hpy8I	GTNNAC	3 cut(s)	198, 746, 907
HpyAV	CCTTC	5 cut(s)	229, 298, 574, 688, 1585
HpyCH4III	ACNGT	7 cut(s)	356, 494, 904, 973, 1154, 1187, 1360
HpyCH4IV	ACGT	5 cut(s)	156, 447, 663, 987, 1709
HpyF3I	CTNAG	8 cut(s)	72, 231, 332, 913, 1401, 1467, 1506, 1749
HpySE526I	ACGT	5 cut(s)	156, 447, 663, 987, 1709
Hsp92I	GRCGYC	6 cut(s)	239, 285, 417, 663, 1698, 1734
Hsp92II	CATG	4 cut(s)	712, 883, 985, 1493
HspAI	GCGC	4 cut(s)	239, 329, 426, 1698
KasI	GGCGCC	2 cut(s)	238, 1697
KpnI	GGTACC	1 cut(s)	360
KroI	GCCGGC	1 cut(s)	1540
KroNI	GCCGGC	1 cut(s)	1542
KspI	CCGCGG	1 cut(s)	127
Kzo9I	GATC	2 cut(s)	397, 1642
LmnI	GCTCC	8 cut(s)	117, 137, 514, 615, 735, 943, 1122, 1237
Lsp1109I	GCAGC	7 cut(s)	52, 618, 652, 947, 968, 1619, 1651
LweI	GCATC	6 cut(s)	451, 473, 579, 741, 801, 1395
MaeI	CTAG	5 cut(s)	80, 201, 791, 1319, 1721
MaeII	ACGT	5 cut(s)	156, 447, 663, 987, 1709
MaeIII	GTNAC	1 cut(s)	1354
MalI	GATC	2 cut(s)	399, 1644
MbiI	CCGCTC	1 cut(s)	1125
MboI	GATC	2 cut(s)	397, 1642
MboII	GAAGA	8 cut(s)	311, 322, 325, 384, 703, 785, 1265, 1295
MfeI	CAATTG	2 cut(s)	45, 1196
MhlI	GDGCHC	2 cut(s)	142, 732
MluCI	AATT	9 cut(s)	45, 323, 895, 1013, 1196, 1270, 1441, 1459, 1669
Mly113I	GGCGCC	2 cut(s)	239, 1698
MlyI	GAGTC	6 cut(s)	236, 403, 856, 1066, 1235, 1718
MmeI	TCCRAC	4 cut(s)	318, 372, 510, 1182
Mph1103I	ATGCAT	1 cut(s)	466
MroNI	GCCGGC	1 cut(s)	1540
MseI	TTAA	1 cut(s)	1635
MslI	CAYNNNNRTG	1 cut(s)	1494
MspA1I	CMGCKG	3 cut(s)	126, 423, 1610
MspI	CCGG	8 cut(s)	172, 211, 560, 947, 1168, 1352, 1541, 1730
MspR9I	CCNGG	2 cut(s)	281, 560
MunI	CAATTG	2 cut(s)	45, 1196
MvaI	CCWGG	1 cut(s)	281
MvnI	CGCG	4 cut(s)	126, 264, 389, 1550
NaeI	GCCGGC	1 cut(s)	1542
NarI	GGCGCC	2 cut(s)	239, 1698
NciI	CCSGG	1 cut(s)	560
NdeII	GATC	2 cut(s)	397, 1642
NgoMIV	GCCGGC	1 cut(s)	1540
NlaIII	CATG	4 cut(s)	712, 883, 985, 1493
NlaIV	GGNNCC	8 cut(s)	119, 190, 240, 358, 516, 1156, 1434, 1699
NmeAIII	GCCGAG	3 cut(s)	267, 821, 1726
NmuCI	GTSAC	1 cut(s)	1354
NsiI	ATGCAT	1 cut(s)	466
PagI	TCATGA	2 cut(s)	879, 1489
PceI	AGGCCT	1 cut(s)	698
PcsI	WCGNNNNNNNCGW	4 cut(s)	101, 291, 444, 453
PdiI	GCCGGC	1 cut(s)	1542
PfoI	TCCNGGA	1 cut(s)	558
PinAI	ACCGGT	1 cut(s)	171
PleI	GAGTC	6 cut(s)	235, 403, 856, 1066, 1234, 1718
PluTI	GGCGCC	2 cut(s)	242, 1701
PmaCI	CACGTG	1 cut(s)	1710
PmlI	CACGTG	1 cut(s)	1710
PpsI	GAGTC	6 cut(s)	235, 403, 856, 1066, 1234, 1718
Ppu21I	YACGTR	1 cut(s)	1710
PshAI	GACNNNNGTC	1 cut(s)	1175
Psp124BI	GAGCTC	2 cut(s)	142, 732
Psp6I	CCWGG	1 cut(s)	279
PspCI	CACGTG	1 cut(s)	1710
PspEI	GGTNACC	1 cut(s)	1354
PspFI	CCCAGC	1 cut(s)	1436
PspGI	CCWGG	1 cut(s)	279
PspN4I	GGNNCC	8 cut(s)	119, 190, 240, 358, 516, 1156, 1434, 1699
RsaI	GTAC	5 cut(s)	358, 1166, 1391, 1514, 1559
RsaNI	GTAC	5 cut(s)	357, 1165, 1390, 1513, 1558
RseI	CAYNNNNRTG	1 cut(s)	1494
SacI	GAGCTC	2 cut(s)	142, 732
SacII	CCGCGG	1 cut(s)	127
SalI	GTCGAC	1 cut(s)	196
SaqAI	TTAA	1 cut(s)	1635
Sau3AI	GATC	2 cut(s)	397, 1642
ScaI	AGTACT	2 cut(s)	1391, 1514
SchI	GAGTC	6 cut(s)	236, 403, 856, 1066, 1235, 1718
ScrFI	CCNGG	2 cut(s)	281, 560
SduI	GDGCHC	2 cut(s)	142, 732
SfaNI	GCATC	6 cut(s)	451, 473, 579, 741, 801, 1395
SfcI	CTRYAG	2 cut(s)	482, 746
SfoI	GGCGCC	2 cut(s)	240, 1699
Sfr303I	CCGCGG	1 cut(s)	127
SgrBI	CCGCGG	1 cut(s)	127
SmiMI	CAYNNNNRTG	1 cut(s)	1494
Sse9I	AATT	9 cut(s)	45, 323, 895, 1013, 1196, 1270, 1441, 1459, 1669
SseBI	AGGCCT	1 cut(s)	698
SspDI	GGCGCC	2 cut(s)	238, 1697
SspMI	CTAG	5 cut(s)	80, 201, 791, 1319, 1721
SstI	GAGCTC	2 cut(s)	142, 732
StuI	AGGCCT	1 cut(s)	698
StyD4I	CCNGG	2 cut(s)	279, 558
StyI	CCWWGG	1 cut(s)	1428
TaaI	ACNGT	7 cut(s)	356, 494, 904, 973, 1154, 1187, 1360
TaiI	ACGT	5 cut(s)	159, 450, 666, 990, 1712
TasI	AATT	9 cut(s)	45, 323, 895, 1013, 1196, 1270, 1441, 1459, 1669
TatI	WGTACW	2 cut(s)	1389, 1512
TauI	GCSGC	8 cut(s)	123, 126, 129, 365, 426, 929, 1128, 1739
Tru1I	TTAA	1 cut(s)	1635
Tru9I	TTAA	1 cut(s)	1635
TscAI	CASTG	4 cut(s)	38, 277, 1066, 1533
TseFI	GTSAC	1 cut(s)	1354
TseI	GCWGC	7 cut(s)	40, 631, 640, 935, 956, 1607, 1664
Tsp45I	GTSAC	1 cut(s)	1354
TspDTI	ATGAA	2 cut(s)	704, 706
TspGWI	ACGGA	7 cut(s)	90, 419, 447, 486, 510, 556, 592
TspRI	CASTG	4 cut(s)	38, 277, 1066, 1533
XapI	RAATTY	1 cut(s)	1270
XbaI	TCTAGA	2 cut(s)	1318, 1720
XmiI	GTMKAC	2 cut(s)	197, 745
XspI	CTAG	5 cut(s)	80, 201, 791, 1319, 1721
ZraI	GACGTC	1 cut(s)	664
ZrmI	AGTACT	2 cut(s)	1391, 1514
Zsp2I	ATGCAT	1 cut(s)	466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.