No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom12401g00260 |
| rosa_chinensis | RchiOBHm_Chr6g0281301 RchiOBHm_Chr7g0214141 |
| rosa_multiflora | Rmu_sc0000650.1_g000021 Rmu_sc0001397.1_g000001 Rmu_ssc0000420.1_g000007 |
| rosa_rugosa | Rorug03G0054400 |
| rosa_samantha | Rh1CG223200 Rh4BG158500 Rh6BG016200 Rh6DG246900 |
| rosa_wichuraiana | Rw0G023330 Rw3G011350 Rw7G041310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 52, 73 |
| AcoI | YGGCCR | 1 cut(s) | 27 |
| AgsI | TTSAA | 2 cut(s) | 88, 112 |
| AhlI | ACTAGT | 1 cut(s) | 34 |
| AoxI | GGCC | 1 cut(s) | 27 |
| BalI | TGGCCA | 1 cut(s) | 29 |
| BciVI | GTATCC | 1 cut(s) | 75 |
| BclI | TGATCA | 1 cut(s) | 45 |
| BcuI | ACTAGT | 1 cut(s) | 34 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfuI | GTATCC | 1 cut(s) | 75 |
| BglII | AGATCT | 1 cut(s) | 154 |
| BmsI | GCATC | 1 cut(s) | 10 |
| BsaBI | GATNNNNATC | 1 cut(s) | 88 |
| Bse8I | GATNNNNATC | 1 cut(s) | 88 |
| BseJI | GATNNNNATC | 1 cut(s) | 88 |
| BshFI | GGCC | 1 cut(s) | 29 |
| BsnI | GGCC | 1 cut(s) | 29 |
| Bsp143I | GATC | 2 cut(s) | 45, 154 |
| BspANI | GGCC | 1 cut(s) | 29 |
| BssMI | GATC | 2 cut(s) | 45, 154 |
| Bst4CI | ACNGT | 1 cut(s) | 57 |
| Bst6I | CTCTTC | 1 cut(s) | 107 |
| BstKTI | GATC | 2 cut(s) | 48, 157 |
| BstMBI | GATC | 2 cut(s) | 45, 154 |
| BstX2I | RGATCY | 1 cut(s) | 154 |
| BstYI | RGATCY | 1 cut(s) | 154 |
| BsuI | GTATCC | 1 cut(s) | 75 |
| BsuRI | GGCC | 1 cut(s) | 29 |
| CviAII | CATG | 1 cut(s) | 43 |
| CviJI | RGCY | 1 cut(s) | 29 |
| CviKI_1 | RGCY | 1 cut(s) | 29 |
| DpnI | GATC | 2 cut(s) | 47, 156 |
| DpnII | GATC | 2 cut(s) | 45, 154 |
| EaeI | YGGCCR | 1 cut(s) | 27 |
| Eam1104I | CTCTTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 107 |
| EcoT22I | ATGCAT | 1 cut(s) | 25 |
| FaeI | CATG | 1 cut(s) | 46 |
| FaiI | YATR | 3 cut(s) | 44, 147, 163 |
| FatI | CATG | 1 cut(s) | 42 |
| FbaI | TGATCA | 1 cut(s) | 45 |
| FblI | GTMKAC | 2 cut(s) | 52, 73 |
| FspBI | CTAG | 1 cut(s) | 35 |
| HaeIII | GGCC | 1 cut(s) | 29 |
| Hin1II | CATG | 1 cut(s) | 46 |
| HincII | GTYRAC | 1 cut(s) | 74 |
| HindII | GTYRAC | 1 cut(s) | 74 |
| HinfI | GANTC | 3 cut(s) | 7, 70, 78 |
| Hpy166II | GTNNAC | 2 cut(s) | 53, 74 |
| Hpy188I | TCNGA | 3 cut(s) | 69, 83, 159 |
| Hpy8I | GTNNAC | 2 cut(s) | 53, 74 |
| Hpy99I | CGWCG | 1 cut(s) | 78 |
| HpyCH4III | ACNGT | 1 cut(s) | 57 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| Hsp92II | CATG | 1 cut(s) | 46 |
| Ksp22I | TGATCA | 1 cut(s) | 45 |
| Kzo9I | GATC | 2 cut(s) | 45, 154 |
| LweI | GCATC | 1 cut(s) | 10 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MaeIII | GTNAC | 1 cut(s) | 94 |
| MalI | GATC | 2 cut(s) | 47, 156 |
| MboI | GATC | 2 cut(s) | 45, 154 |
| MboII | GAAGA | 2 cut(s) | 16, 124 |
| MflI | RGATCY | 1 cut(s) | 154 |
| MlsI | TGGCCA | 1 cut(s) | 29 |
| MluNI | TGGCCA | 1 cut(s) | 29 |
| MlyI | GAGTC | 1 cut(s) | 79 |
| Mox20I | TGGCCA | 1 cut(s) | 29 |
| Mph1103I | ATGCAT | 1 cut(s) | 25 |
| MscI | TGGCCA | 1 cut(s) | 29 |
| Msp20I | TGGCCA | 1 cut(s) | 29 |
| NdeII | GATC | 2 cut(s) | 45, 154 |
| NlaIII | CATG | 1 cut(s) | 46 |
| NsiI | ATGCAT | 1 cut(s) | 25 |
| PfeI | GAWTC | 2 cut(s) | 7, 78 |
| PleI | GAGTC | 1 cut(s) | 78 |
| PpsI | GAGTC | 1 cut(s) | 78 |
| PsuI | RGATCY | 1 cut(s) | 154 |
| SalI | GTCGAC | 1 cut(s) | 72 |
| Sau3AI | GATC | 2 cut(s) | 45, 154 |
| SchI | GAGTC | 1 cut(s) | 79 |
| SetI | ASST | 1 cut(s) | 130 |
| SfaNI | GCATC | 1 cut(s) | 10 |
| SgeI | CNNG | 5 cut(s) | 47, 55, 81, 111, 152 |
| SpeI | ACTAGT | 1 cut(s) | 34 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TaaI | ACNGT | 1 cut(s) | 57 |
| TaqI | TCGA | 1 cut(s) | 73 |
| TfiI | GAWTC | 2 cut(s) | 7, 78 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XmiI | GTMKAC | 2 cut(s) | 52, 73 |
| XspI | CTAG | 1 cut(s) | 35 |
| Zsp2I | ATGCAT | 1 cut(s) | 25 |